Information for 14-TGTCCAAATTCT (Motif 11)


Reverse Opposite:

p-value:1e-16
log p-value:-3.905e+01
Information Content per bp:1.691
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif176.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets203.7 +/- 121.8bp
Average Position of motif in Background229.4 +/- 172.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTCCAAATTCT
TGACCTARTT--

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTCCAAATTCT-----------
-GTGCTAATTGTGTGTGTACGCT

YOX1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCCAAATTCT
CGTCANTATTCT

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCAAATTCT-
TTGACCTANTTATN

Hr46/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTCCAAATTCT
TGACCCAATT--

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTCCAAATTCT
TTATGTACTAATAA-

TEC1(MacIsaac)/Yeast

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGTCCAAATTCT
----CACATTCT

byn/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTCCAAATTCT
-GTGCGAATT--

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTCCAAATTCT
ATATGCAAAT---

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTCCAAATTCT-
TTGTATGCAAATTAGA