Information for 8-TCAGATCCCCTG (Motif 8)


Reverse Opposite:

p-value:1e-184
log p-value:-4.248e+02
Information Content per bp:1.736
Number of Target Sequences with motif2930.0
Percentage of Target Sequences with motif6.99%
Number of Background Sequences with motif2307.3
Percentage of Background Sequences with motif3.19%
Average Position of motif in Targets178.3 +/- 104.2bp
Average Position of motif in Background216.5 +/- 159.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

REI1/MA0364.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TCAGATCCCCTG-
------CCCCTGA

MSN4/Literature(Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TCAGATCCCCTG
-----NCCCCTG

RGM1/MA0366.1/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TCAGATCCCCTG
------CCCCT-

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCAGATCCCCTG
-CAGATCA----

MSN4/MA0342.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCAGATCCCCTG
------CCCCT-

ARR1/MA0945.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCAGATCCCCTG
-NAGATTCGNT-

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCAGATCCCCTG
-----TCCCCA-

ARR10/MA0121.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAGATCCCCTG
--AGATCCGC--

MSN2/MA0341.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TCAGATCCCCTG
------CCCCT-

SRD1/MA0389.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGATCCCCTG
--AGATCTAC--