Information for 4-CRCCMTCT (Motif 6)


Reverse Opposite:

p-value:1e-212
log p-value:-4.895e+02
Information Content per bp:1.717
Number of Target Sequences with motif25701.0
Percentage of Target Sequences with motif61.31%
Number of Background Sequences with motif37537.0
Percentage of Background Sequences with motif51.83%
Average Position of motif in Targets193.2 +/- 114.3bp
Average Position of motif in Background204.6 +/- 145.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CRCCMTCT-----
GGCGCCATCTAGCGG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CRCCMTCT---
-GCCATCTGTT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CRCCMTCT------
CNNBRGCGCCCCCTGSTGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CRCCMTCT----
GGTCCCGCCCCCTTCTC

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CRCCMTCT--------
TAGCGCCCCCTGGTGGCCA

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CRCCMTCT--
GCCGCCATCTTG

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CRCCMTCT--
GCNGCCATCTTG

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CRCCMTCT--------
ANAGTGCCACCTGGTGGCCA

RPN4/MA0373.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CRCCMTCT
CGCCACC-

btd/MA0443.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CRCCMTCT
TCCGCCCCCT