Information for 6-TCTTSCAGAGGA (Motif 5)


Reverse Opposite:

p-value:1e-216
log p-value:-4.990e+02
Information Content per bp:1.747
Number of Target Sequences with motif2792.0
Percentage of Target Sequences with motif6.66%
Number of Background Sequences with motif1966.9
Percentage of Background Sequences with motif2.72%
Average Position of motif in Targets172.8 +/- 103.2bp
Average Position of motif in Background213.9 +/- 163.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RME1/MA0370.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
---TCCAAAGGAA

RME1(MacIsaac)/Yeast

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
---TCCAAAGGAA

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCTTSCAGAGGA--
CATTTCCTGAGAAAT

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTTSCAGAGGA
--TTCCKNAGAA

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTTSCAGAGGA
TTTTCCA-----

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
------AGAGGAA

Tal1

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCTTSCAGAGGA
-----CAGATG-

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------TCTTSCAGAGGA
TTTTTTTTTTTTTTCAGGTT-

XBP1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTTSCAGAGGA
-CTTCGAG----

ARO80/MA0273.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTTSCAGAGGA-----
NNNNANTTNCCGAGANNTNNC