Information for 5-GGAGCTGGAGTT (Motif 3)


Reverse Opposite:

p-value:1e-260
log p-value:-5.998e+02
Information Content per bp:1.736
Number of Target Sequences with motif2787.0
Percentage of Target Sequences with motif6.65%
Number of Background Sequences with motif1749.5
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets189.3 +/- 118.0bp
Average Position of motif in Background222.6 +/- 160.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGGAGTT
GGGAATTGTAGT-

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGCTGGAGTT
GCATTCTGGGAATTGTAGTT

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGGAGTT
GGGTGCTGACGT-

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGGAGTT
CGGAGC-------

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGCTGGAGTT
GGAAGTGAAAST

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGCTGGAGTT
GRTGMTRGAGCC

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGGAGTT
GACAGCTGCAG--

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGGAGTT
TGGAACAGMA---

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTGGAGTT
AACAGCTGCAG--

YLR278C/MA0430.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGAGCTGGAGTT
----CCGGAGTT