Information for 21-GGGAATCAAA (Motif 20)


Reverse Opposite:

p-value:1e-32
log p-value:-7.580e+01
Information Content per bp:1.849
Number of Target Sequences with motif640.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif550.0
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets186.2 +/- 116.5bp
Average Position of motif in Background227.0 +/- 164.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pan/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GGGAATCAAA
----ATCAAA

kni/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAATCAAA
GGGAACAAA-

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGGAATCAAA
---TATCAAA

pan/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGGAATCAAA-
----ATCAAAG

pan/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGGAATCAAA-
---GATCAAAG

Rel/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGAATCAAA
GGGGAATCCCN

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGAATCAAA---
AATAGGGTATCATATAT

ara/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGAATCAAA
---AATCAA-

onecut/MA0235.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGGAATCAAA
--AAATCAA-

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGAATCAAA---
AATAGGGTATCAATTAT