Information for 20-GAGCACTKGCTG (Motif 17)


Reverse Opposite:

p-value:1e-73
log p-value:-1.691e+02
Information Content per bp:1.694
Number of Target Sequences with motif2139.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif2134.7
Percentage of Background Sequences with motif2.95%
Average Position of motif in Targets175.0 +/- 110.7bp
Average Position of motif in Background201.7 +/- 161.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACTKGCTG
NNNNTGAGCACTGTNNG

grh/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GAGCACTKGCTG
-----CTGGTT-

sna/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAGCACTKGCTG
--CCACCTGCTN

sna/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGCACTKGCTG
--CAACCTGCT-

sna/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGCACTKGCTG
--CCACCTGNT-

SWI5/Literature(Harbison)/Yeast

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GAGCACTKGCTG-
-------GGCTGA

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGCACTKGCTG-
---CACTTCCTGT

Aef1/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAGCACTKGCTG
------TTGTTG

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GAGCACTKGCTG
-----CTGGTTC

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGCACTKGCTG---
ANCCACCTGTTGCNC