Information for 10-CTGTAACTCC (Motif 12)


Reverse Opposite:

p-value:1e-138
log p-value:-3.198e+02
Information Content per bp:1.784
Number of Target Sequences with motif2090.0
Percentage of Target Sequences with motif4.99%
Number of Background Sequences with motif1594.0
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets181.3 +/- 109.6bp
Average Position of motif in Background224.4 +/- 182.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB5/STB5_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGTAACTCC-
-TATAACACCG

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTGTAACTCC
GSCTGTCACTCA

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTAACTCC-
NCTGTCAATCAN

HMRA2/MA0318.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGTAACTCC
CATGTAAT---

YPR015C/MA0435.1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAACTCC-----
TGAAGACGTAAATCCTTACA

STB5(MacIsaac)/Yeast

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTAACTCC-
-TATAACACCG

URC2/MA0422.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGTAACTCC--
--NTATCTCCGN

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACTCC-
AGGACGCTGTAAAGGGA

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACTCC-
AAGACGCTGTAAAGCGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGTAACTCC-
AAGACGCTGTAAAGCGA