Information for 6-TGCATGTA (Motif 11)


Reverse Opposite:

p-value:1e-149
log p-value:-3.442e+02
Information Content per bp:1.826
Number of Target Sequences with motif6166.0
Percentage of Target Sequences with motif14.71%
Number of Background Sequences with motif6912.9
Percentage of Background Sequences with motif9.55%
Average Position of motif in Targets177.7 +/- 108.4bp
Average Position of motif in Background216.8 +/- 187.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGCATGTA
TGCATGCA

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGCATGTA
TTTGCATGGA

LEC2/MA0581.1/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGTA
ATGTGCATGNN

SOK2/MA0385.1/Jaspar

Match Rank:4
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----TGCATGTA
NNCCTGCAGGT-

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGTA
NGNTGCAGGN-

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:6
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGCATGTA
-GCATGTG

ABI3/MA0564.1/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGCATGTA
CTGCATGCA

INO2/MA0321.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TGCATGTA--
-GCATGTGAA

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TGCATGTA-----
AATATACATGTAATATA

INO2(MacIsaac)/Yeast

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGCATGTA--
-GCATGTGAA