Information for 1-GGCACTGCAY (Motif 1)


Reverse Opposite:

p-value:1e-977
log p-value:-2.251e+03
Information Content per bp:1.760
Number of Target Sequences with motif5773.0
Percentage of Target Sequences with motif13.77%
Number of Background Sequences with motif2224.9
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets173.0 +/- 84.8bp
Average Position of motif in Background222.2 +/- 161.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---GGCACTGCAY----
AATCGCACTGCATTCCG

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGCACTGCAY--
GGGATTGCATNN

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:-11
Orientation:reverse strand
Alignment:-----------GGCACTGCAY
TGGCCANNNNNGGAACTGCA-

PHD1/MA0355.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCACTGCAY--
--ACCTGCAGCA

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGCACTGCAY--
---ANTGCACCC

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCACTGCAY
TGGAACAGMA-

SOK2/MA0385.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCACTGCAY---
--ACCTGCAGGCA

PHD1(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCACTGCAY
AGGCAC-----

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCACTGCAY
-TNCCTGCA-

CST6(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCACTGCAY
-NAAATGCA-