cmd = /srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF10/out/peak/idr/pseudo_reps/rep1/ZF10_rep1-pr.IDR0.05.filt.fa fasta /srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF10/out/peak/idr/pseudo_reps/rep1/ZF10_rep1-pr.IDR0.05.HomerResults -fasta /srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/allZFAndWT-pr.IDR0.05.fa