MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 8.7e-674
  • 593 sites
 Motif 1 Logo Motif 1 Logo
Motif 2
  • 2.4e-158
  • 139 sites
 Motif 2 Logo Motif 2 Logo
Motif 3
  • 1.4e-115
  • 140 sites
 Motif 3 Logo Motif 3 Logo
Motif 4
  • 1.1e-075
  • 112 sites
 Motif 4 Logo Motif 4 Logo
Motif 5
  • 6.7e+059
  • 100 sites
 Motif 5 Logo Motif 5 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 8.7e-674
Width 10
Sites 593
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
StandardReverse Complement

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GA[AG]CTGGAGT

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
chr9_57506898_57507098 8 9.48e-07 CCTCCTG GAACTGGAGT TAA
chr8_13169606_13169832 1 9.48e-07 GAACTGGAGT TAAGAGAGAA
chr7_140950466_140950659 8 9.48e-07 TCCCCTA GAACTGGAGT TGA
chr7_134221320_134221529 8 9.48e-07 TCCCTGG GAACTGGAGT CTC
chr7_130163035_130163240 10 9.48e-07 GGAGTCCTG GAACTGGAGT T
chr7_128232339_128232560 9 9.48e-07 TTCTCCTG GAACTGGAGT TC
chr7_120849517_120849725 8 9.48e-07 TCCCCTG GAACTGGAGT TAT
chr6_145790786_145791048 8 9.48e-07 TCCCCTG GAACTGGAGT TAC
chr6_144219960_144220148 9 9.48e-07 TCCCCTTG GAACTGGAGT TA
chr6_38875854_38876104 8 9.48e-07 CTCCCCG GAACTGGAGT CAC
chr5_149191245_149191845 8 9.48e-07 CCACCTG GAACTGGAGT TAC
chr5_148139335_148139538 8 9.48e-07 TCCCTCA GAACTGGAGT TGC
chr5_147932783_147933045 8 9.48e-07 TCCCCTG GAACTGGAGT TGC
chr5_125892360_125892656 8 9.48e-07 GTCTCTG GAACTGGAGT TAC
chr5_120197072_120197323 8 9.48e-07 TCTCCTG GAACTGGAGT TAA
chr5_117563438_117563625 8 9.48e-07 TCCCTGA GAACTGGAGT TCT
chr5_115068947_115069196 7 9.48e-07 CCCTTG GAACTGGAGT TAAC
chr5_44557215_44557418 8 9.48e-07 TCTCCTA GAACTGGAGT TAC
chr5_38627994_38628169 8 9.48e-07 TCCCCTG GAACTGGAGT TAA
chr4_135708859_135709088 8 9.48e-07 TCCCCTG GAACTGGAGT TAC
chr4_130429476_130429726 8 9.48e-07 TCCATCA GAACTGGAGT TAC
chr4_124013119_124013275 9 9.48e-07 TCCCCTGG GAACTGGAGT CA
chr4_55463975_55464279 8 9.48e-07 TCCTCTG GAACTGGAGT TAC
chr3_157828052_157828277 8 9.48e-07 TTTCCTG GAACTGGAGT TTA
chr3_96617149_96617351 8 9.48e-07 TCCCCTG GAACTGGAGT TCT
chr3_95665782_95666076 7 9.48e-07 CAGTTG GAACTGGAGT TTCA
chr3_84462846_84463176 8 9.48e-07 TTCCCTG GAACTGGAGT GAA
chr3_83605625_83605928 6 9.48e-07 CCCTG GAACTGGAGT TAGAA
chr3_40480982_40481159 8 9.48e-07 TCTCTTG GAACTGGAGT GAC
chr2_173001309_173001526 8 9.48e-07 TCCTCTA GAACTGGAGT TAA
chr2_90514840_90515002 8 9.48e-07 GCCCCTG GAACTGGAGT TAC
chr2_31329506_31329816 8 9.48e-07 TCCTCTG GAACTGGAGT TAC
chr2_30314833_30315060 8 9.48e-07 TCCCCTG GAACTGGAGT TAG
chr2_22863221_22863431 8 9.48e-07 CCCTCTA GAACTGGAGT TAC
chr2_17754482_17754708 8 9.48e-07 TTTCCTG GAACTGGAGT TAG
chr19_59184452_59184672 8 9.48e-07 TACCCTG GAACTGGAGT TAC
chr19_47563827_47564051 8 9.48e-07 GCTCCCG GAACTGGAGT TAT
chr19_5428181_5428349 8 9.48e-07 TCCCCTG GAACTGGAGT CAC
chr18_69894768_69894982 8 9.48e-07 TCTCCTG GAACTGGAGT TAG
chr18_61018109_61018397 8 9.48e-07 TCCCCTA GAACTGGAGT TAC
chr16_91582645_91582835 8 9.48e-07 CCCTCTG GAACTGGAGT TAC
chr16_29785327_29785472 8 9.48e-07 TCCCCTG GAACTGGAGT TGC
chr15_99646504_99646653 8 9.48e-07 CTCCCTG GAACTGGAGT TAT
chr15_83196226_83196410 8 9.48e-07 TTCCTTG GAACTGGAGT TTG
chr14_119402646_119402885 8 9.48e-07 TCCCCAG GAACTGGAGT TGT
chr14_33283404_33283589 8 9.48e-07 CCCCCTG GAACTGGAGT TGC
chr13_55494320_55494652 8 9.48e-07 TCCCCTG GAACTGGAGT TAT
chr12_118425681_118425937 7 9.48e-07 TTCCCA GAACTGGAGT TTAC
chr12_73755822_73755994 8 9.48e-07 TTCCGTG GAACTGGAGT TAC
chr12_33965653_33966007 9 9.48e-07 TTCCCCTG GAACTGGAGT TG
chr12_16393318_16393518 8 9.48e-07 ACCCCTG GAACTGGAGT TAC
chr11_109302527_109302799 8 9.48e-07 TCCCCTG GAACTGGAGT TAC
chr11_89897878_89898093 8 9.48e-07 TCTCCTG GAACTGGAGT TAC
chr11_58625610_58625786 8 9.48e-07 TCCTCTG GAACTGGAGT GAG
chr11_52330865_52331151 8 9.48e-07 TTCCCTG GAACTGGAGT TCC
chr11_36860256_36860510 8 9.48e-07 TCCCCCG GAACTGGAGT TCC
chr11_35517081_35517324 8 9.48e-07 TCGCCTA GAACTGGAGT TGG
chr11_32234165_32234379 8 9.48e-07 ACCCCCA GAACTGGAGT TAC
chr10_122427737_122427943 8 9.48e-07 TCCCCTG GAACTGGAGT TAG
chr10_120864267_120864565 10 9.48e-07 TTCCCCCTG GAACTGGAGT T
chr10_60075686_60075947 7 9.48e-07 CCCCCG GAACTGGAGT TACT
chr10_20015924_20016052 9 9.48e-07 TTCTCTTG GAACTGGAGT TA
chr1_192736628_192736799 8 9.48e-07 TCCCTCA GAACTGGAGT TAC
chr1_184396150_184396369 8 9.48e-07 TCTACTG GAACTGGAGT CAC
chr1_163070240_163070442 8 9.48e-07 TCCCTTG GAACTGGAGT TAC
chr1_162720854_162720980 8 9.48e-07 TACCCTG GAACTGGAGT TAC
chr1_135933128_135933351 8 9.48e-07 CCTCCTG GAACTGGAGT CAG
chr9_115968346_115968637 8 1.83e-06 TGCCCGG GAGCTGGAGT TAG
chr9_103205078_103205244 7 1.83e-06 TCTCCA GAGCTGGAGT TACA
chr8_129337604_129337810 8 1.83e-06 TCCCCTT GAGCTGGAGT TAC
chr8_124275380_124275613 8 1.83e-06 TCCCCCA GAGCTGGAGT TAC
chr8_11430738_11431031 8 1.83e-06 GCCCTTG GAGCTGGAGT TAC
chr7_31532624_31532843 8 1.83e-06 TCCTCTG GAGCTGGAGT CAC
chr7_29776754_29776869 7 1.83e-06 TCCCTG GAGCTGGAGT TAAG
chr7_29040568_29040790 8 1.83e-06 TTCCTTG GAGCTGGAGT CAC
chr6_145604341_145604449 8 1.83e-06 CCTTGTG GAGCTGGAGT TAG
chr6_124296715_124296940 8 1.83e-06 TCTCCTG GAGCTGGAGT TAC
chr6_97054283_97054570 8 1.83e-06 CCTCCTG GAGCTGGAGT TGA
chr6_86049083_86049302 8 1.83e-06 TGCCCTG GAGCTGGAGT TGC
chr5_142626848_142627049 8 1.83e-06 TCCCCTG GAGCTGGAGT TGT
chr5_129565053_129565317 8 1.83e-06 TCCTCTG GAGCTGGAGT TAC
chr5_89220634_89220900 7 1.83e-06 TCACCG GAGCTGGAGT TAAA
chr4_46794017_46794283 8 1.83e-06 TCCCTAG GAGCTGGAGT GAC
chr3_89621069_89621387 8 1.83e-06 TCCCCTG GAGCTGGAGT TGG
chr2_154742338_154742617 9 1.83e-06 ATCCCCCA GAGCTGGAGT TC
chr2_152397893_152398138 5 1.83e-06 TGGG GAGCTGGAGT TCCAGG
chr2_115927012_115927245 7 1.83e-06 ACCCAG GAGCTGGAGT TACA
chr2_35727093_35727326 8 1.83e-06 TCTGTTG GAGCTGGAGT TAC
chr2_32698125_32698399 8 1.83e-06 TCCAGGG GAGCTGGAGT TAC
chr18_34418846_34419193 7 1.83e-06 TCCTCG GAGCTGGAGT TCCA
chr17_47980547_47980804 7 1.83e-06 CCTCTG GAGCTGGAGT TACA
chr16_20089865_20090037 7 1.83e-06 TCGTTG GAGCTGGAGT TCCA
chr15_84509636_84509856 7 1.83e-06 TTCACA GAGCTGGAGT TACA
chr15_81592512_81592731 8 1.83e-06 TCCCCTG GAGCTGGAGT TGG
chr13_101614008_101614195 8 1.83e-06 TGCCCTG GAGCTGGAGT TAA
chr13_24082778_24083004 6 1.83e-06 CAGCC GAGCTGGAGT TTTTC
chr12_85880636_85880792 8 1.83e-06 TCCCCAG GAGCTGGAGT ACC
chr11_109283641_109283838 8 1.83e-06 TCCCATG GAGCTGGAGT TTC
chr11_88095323_88095484 8 1.83e-06 CTCTGCT GAGCTGGAGT CAC
chr11_79856474_79856657 8 1.83e-06 TCTCCGG GAGCTGGAGT TAC
chr11_51379533_51379787 9 1.83e-06 TTCCCCTG GAGCTGGAGT TA
chr11_22850205_22850485 8 1.83e-06 GCCCCTG GAGCTGGAGT TAT
chr10_58841619_58841797 8 1.83e-06 TCCCCCG GAGCTGGAGT TAC
chr9_108220008_108220207 7 3.73e-06 ACCCTG AAACTGGAGT TAAT
chr9_67650082_67650321 8 3.73e-06 TTCCCTT AAACTGGAGT TAC
chr9_63458113_63458335 8 3.73e-06 TCCCCTG AAACTGGAGT TAC
chr8_129429357_129429649 8 3.73e-06 TCCCTGG AAACTGGAGT TGC
chr8_82174425_82174624 5 3.73e-06 CCTG AAACTGGAGT TAGACA
chr7_125457402_125457629 8 3.73e-06 TCCCCTG GGACTGGAGT TAA
chr6_146247328_146247543 8 3.73e-06 TCCTCAG AAACTGGAGT TAC
chr6_117902448_117902644 6 3.73e-06 CCCCT GGACTGGAGT TACAG
chr6_115496352_115496679 7 3.73e-06 TCCTTG GGACTGGAGT TACT
chr6_114356714_114356929 8 3.73e-06 GCCACTG GGACTGGAGT AGC
chr6_73155077_73155272 8 3.73e-06 TACCCTG GGACTGGAGT TAC
chr6_40186879_40187152 8 3.73e-06 TCTCCCA GGACTGGAGT TAC
chr5_100669991_100670247 5 3.73e-06 GTCT GGACTGGAGT CTCAAT
chr5_35276197_35276446 8 3.73e-06 TTCCCCA GGACTGGAGT TAG
chr5_3283210_3283386 7 3.73e-06 GCCCTG AAACTGGAGT TACC
chr4_131736748_131736949 10 3.73e-06 GGATTCCCG GGACTGGAGT T
chr2_102928370_102928545 8 3.73e-06 TCTGCTG GGACTGGAGT TAA
chr19_46464514_46464633 9 3.73e-06 TCCCCTTA AAACTGGAGT AC
chr18_35532591_35532757 8 3.73e-06 TGTCCTA AAACTGGAGT TCC
chr17_78440666_78440855 8 3.73e-06 TCTCCTC GGACTGGAGT TAA
chr17_47249638_47249782 8 3.73e-06 TGCCCTG GGACTGGAGT TAC
chr17_34346739_34346960 8 3.73e-06 TACCCTG GGACTGGAGT TAC
chr17_30872525_30872692 8 3.73e-06 GGGCCTG AAACTGGAGT TAC
chr16_90381936_90382234 8 3.73e-06 TACCCTG AAACTGGAGT TAC
chr15_91131820_91132130 8 3.73e-06 TCCCCTG AAACTGGAGT TAC
chr15_27835088_27835384 8 3.73e-06 TCCCTTG GGACTGGAGT CAT
chr12_70434644_70434861 8 3.73e-06 TTCCCTG GGACTGGAGT TGT
chr11_114775825_114776003 8 3.73e-06 TCCCCTG GGACTGGAGT TAC
chr11_85084273_85084433 9 3.73e-06 TCTCCTCG GGACTGGAGT AA
chr11_69344385_69344550 8 3.73e-06 TCCCATC AAACTGGAGT TAA
chr11_32494235_32494405 7 3.73e-06 TCCCTG GGACTGGAGT CACA
chr11_32430183_32430497 8 3.73e-06 TCACATG AAACTGGAGT GAC
chr10_50635560_50635722 8 3.73e-06 TTCCCTG GGACTGGAGT TAT
chr1_169236694_169236941 8 3.73e-06 TCACCCA AAACTGGAGT GAA
chr1_136332077_136332248 8 3.73e-06 TTCCCCG AAACTGGAGT TAC
chr1_88049258_88049490 8 3.73e-06 TTCCCAG AAACTGGAGT GAC
chr1_70833850_70834031 8 3.73e-06 TGACCTG GGACTGGAGT TCT
chr8_108462256_108462501 8 5.77e-06 TTCCCTG GAACTGAAGT TAC
chr8_19588846_19589041 8 5.77e-06 TCCTCTG GAACTGAAGT CTG
chr7_141016391_141016544 9 5.77e-06 TTTCCCTG GAACTGAAGT TT
chr7_108938649_108938854 8 5.77e-06 TACCCTG GAACTAGAGT TTC
chr7_29822308_29822591 6 5.77e-06 TCTTG GAACTGAAGT TACAG
chr6_87491888_87492231 8 5.77e-06 TCCCCCG GAACTAGAGT TAC
chr6_35729844_35730026 8 5.77e-06 TGCCCTG GAACTGAAGT TAA
chr5_144121808_144121997 9 5.77e-06 CTCCCCTG GAACTAGAGT TA
chr5_118274631_118274833 8 5.77e-06 TCCCCTG GAACTGAAGT TAA
chr5_104468712_104468892 8 5.77e-06 TCCCCTG GAACTAGAGT TGT
chr3_54291879_54292099 8 5.77e-06 TTCCCCG GAACTAGAGT TAC
chr2_167506277_167506523 8 5.77e-06 CCACCTG GAACTGAAGT TAT
chr2_103706013_103706247 8 5.77e-06 ACATCAA GAACTGAAGT TAC
chr2_69469622_69469834 9 5.77e-06 TTCCCCTG GAACTAGAGT TA
chr17_27901541_27901705 8 5.77e-06 TCTTCTG GAACTGAAGT AAG
chr17_5316451_5316713 8 5.77e-06 TCCTCTG GAACTGAAGT TAC
chr16_84550787_84550967 8 5.77e-06 CTCCCTG GAACTAGAGT TAA
chr15_79648875_79649031 8 5.77e-06 TCTCCTG GAACTGAAGT TCA
chr13_51825111_51825494 9 5.77e-06 TTCCCCTG GAACTGAAGT CC
chr12_16577562_16577782 9 5.77e-06 TCCCCCCA GAACTGAAGT TG
chr11_75589567_75589763 9 5.77e-06 GCCTCTGG GAACTGAAGT TA
chr11_53456382_53456623 8 5.77e-06 TCTACTG GAACTGAAGT TAA
chr10_93610167_93610747 8 5.77e-06 TCCAATG GAACTGAAGT TAC
chr10_93587267_93587458 8 5.77e-06 TCTCCAG GAACTAGAGT TAC
chr10_21057082_21057321 8 5.77e-06 TCTCCTA GAACTAGAGT TCC
chr1_171880878_171881090 8 5.77e-06 TCCCCTA GAACTGAAGT TAG
chr1_139123169_139123390 8 5.77e-06 TCCACTA GAACTAGAGT TAG
chr1_91909539_91909778 7 5.77e-06 TCTTCA GAACTAGAGT TAAT
chr1_88301525_88301724 8 5.77e-06 GCCCCTG GAACTAGAGT TAG
chr9_71377820_71378024 8 6.78e-06 TCCTCTG GAACTGGAAT TCC
chr9_63697494_63697737 8 6.78e-06 TCCCCTT GAACTGGAAT CGC
chr7_25406299_25406510 8 6.78e-06 TCCCCTA GAACTGGAAT CGT
chr6_108391385_108391554 7 6.78e-06 TCCCTT GAACTGGAAT TACT
chr5_151235657_151235826 8 6.78e-06 TTTCCTG GAACTGGAAT TAC
chr5_112961356_112961593 8 6.78e-06 TCCCTTG GAACTGGAAT TAC
chr4_127047777_127047945 8 6.78e-06 TCCTCTG GAACTGGAAT TGC
chr12_81300790_81300985 8 6.78e-06 TCCCCTG GAACTGGAAT TGC
chr11_102715187_102715393 8 6.78e-06 TACCCAG GAACTGGAAT TAC
chr9_14650940_14651208 6 1.04e-05 TCCCG AAGCTGGAGT TAAAG
chr8_122887418_122887693 7 1.04e-05 TTCCCT GGGCTGGAGT GACT
chr8_26776690_26776898 7 1.04e-05 CGCCCG GGGCTGGAGT TAGA
chr8_25351116_25351331 8 1.04e-05 TCTCCTG GAACTGGAGC TGT
chr7_51532701_51532974 8 1.04e-05 ACACCTG AAGCTGGAGT TGA
chr7_35007483_35007685 8 1.04e-05 TCCCCCA GAACTGCAGT TAC
chr6_140465808_140466032 8 1.04e-05 TTCCTTG GAACTGGAGC TAT
chr6_108664504_108664634 8 1.04e-05 TGTCCTG GAACTGCAGT TAC
chr6_82705408_82705635 5 1.04e-05 CCTG GAACTGCAGT GAAAGG
chr5_73187338_73187612 8 1.04e-05 CCTCTTG AAGCTGGAGT TTC
chr4_122547407_122547593 7 1.04e-05 TCCCCT GAACTGGAGC CATG
chr2_168948490_168948692 8 1.04e-05 TCATCTG AAGCTGGAGT TAG
chr2_167038634_167038847 8 1.04e-05 GTGCCTG GAACTGGAGC TAA
chr2_165819987_165820194 8 1.04e-05 TCCCCTG GAACTGGAGC CAT
chr2_152983078_152983333 8 1.04e-05 TCCCCTG GAACTGCAGT TAC
chr2_57215037_57215194 8 1.04e-05 TTCCCTG GGGCTGGAGT TTC
chr19_6684072_6684299 8 1.04e-05 TCCCCTG GAACTGCAGT TAG
chr19_6018152_6018448 8 1.04e-05 ATCCCTG GAACTGGAGC TAC
chr17_49498640_49498811 3 1.04e-05 TG AAGCTGGAGT TACAGATG
chr16_97814760_97815065 8 1.04e-05 TCCCTTG GAACTGGAGC CAA
chr13_54824582_54824799 8 1.04e-05 TCCCTTG GAACTGCAGT TAC
chr13_49252087_49252299 8 1.04e-05 TCCCCAG GGGCTGGAGT TAC
chr13_24591415_24591696 8 1.04e-05 TCTCCTG AAGCTGGAGT TAC
chr11_57731623_57731803 7 1.04e-05 ACCCTG GAACTGGAGC TTCA
chr9_121211719_121211985 10 1.32e-05 GTCCCCCCA GAGCTGAAGT G
chr8_122908775_122908990 8 1.32e-05 TCCCCTG GACCTGGAGT TAC
chr6_128049984_128050161 9 1.32e-05 TCGCCTTG GACCTGGAGT TA
chr5_149182327_149182562 8 1.32e-05 TCCCATG GACCTGGAGT TGC
chr5_126444460_126444693 8 1.32e-05 CCTAGTG GAGCTGAAGT TAC
chr5_122884673_122884800 7 1.32e-05 TTCTCT GAGCTGAAGT CACG
chr3_97103889_97104182 8 1.32e-05 TCCCCTG GACCTGGAGT TAC
chr2_168934659_168934871 8 1.32e-05 TCCACTA GACCTGGAGT CAC
chr2_156869805_156870021 8 1.32e-05 TCTCCTG GACCTGGAGT TAA
chr2_79176404_79176587 8 1.32e-05 TCTTCTT GAGCTAGAGT TAC
chr19_30902486_30902631 9 1.32e-05 GCTCCCTA GAGCTGAAGT TA
chr17_35028454_35028639 8 1.32e-05 TCCCCTG GAGCTGAAGT TAC
chr14_118281528_118281845 8 1.32e-05 TCACCTG GAGCTGAAGT TAA
chr13_25236069_25236277 8 1.32e-05 TACTCTG GAGCTGAAGT TAG
chr13_11917946_11918158 8 1.32e-05 TCCCTTA GAGCTAGAGT TAC
chr12_118690048_118690264 8 1.32e-05 TCCACTA GACCTGGAGT TAT
chr11_117735830_117735967 8 1.32e-05 CAACCTG GAGCTAGAGT TAC
chr11_104312647_104312829 8 1.32e-05 TCACCTA GACCTGGAGT TGT
chr11_82433071_82433204 9 1.32e-05 TCACCCTG GACCTGGAGT TT
chr11_76224376_76224634 1 1.32e-05 GAGCTGAAGT CAAGTCTATC
chr1_163320321_163320510 8 1.32e-05 TTCTCTG GAGCTGAAGT TAT
chr1_33593571_33593726 9 1.32e-05 TCTCCTTG GACCTGGAGT TA
chr9_121383968_121384257 8 1.51e-05 TCCCCTA GAGCTGGAAT CAC
chr8_126324843_126325077 8 1.51e-05 TCCCCTG GAATTGGAGT TAC
chr8_37164951_37165138 8 1.51e-05 CTTCCTG GAATTGGAGT CAT
chr5_111269691_111269915 8 1.51e-05 TCACCAA GAGCTGGAAT TAC
chr5_66525904_66526097 8 1.51e-05 GTCCCAG GAGCTGGAAT TAC
chr4_132176098_132176337 8 1.51e-05 TGCCCTG GAGCTGGAAT CAC
chr4_57034281_57034479 8 1.51e-05 TCCCCCG GAGCTGGAAT ACA
chr3_97698669_97698964 7 1.51e-05 TCCCAA GAATTGGAGT GACA
chr2_52944704_52944973 9 1.51e-05 TGCCATTA GAATTGGAGT TA
chr17_88466924_88467138 8 1.51e-05 TGCCCTA GAATTGGAGT TAC
chr16_36469067_36469323 8 1.51e-05 TTCCTTG GAATTGGAGT TAC
chr16_27140211_27140463 8 1.51e-05 TCCCAAA GAATTGGAGT TAC
chr13_52928598_52928983 8 1.51e-05 CCCACTG GAGCTGGAAT CAG
chr12_112608631_112608862 10 1.51e-05 TCTGCTGGG GAGCTGGAAT T
chr11_53394143_53394355 8 1.51e-05 TCTCCTG GAATTGGAGT TAC
chr1_84467037_84467187 7 1.51e-05 TCCTCA GAGCTGGAAT TGCA
chr1_37523509_37523772 8 1.51e-05 TCCCCTG GAATTGGAGT AAC
chr7_38932561_38932831 8 1.68e-05 TCCACCC GAGCTGCAGT TAC
chr5_115615441_115615590 8 1.68e-05 TCTCGCG GAGCTGCAGT TAC
chr5_73447836_73448049 8 1.68e-05 TCCCCTA GAGCTGGAGC CAC
chr2_128328705_128328932 9 1.68e-05 AGGGACCA GAGCTGCAGT GG
chr18_58758874_58759067 8 1.68e-05 TCCCACA GAGCTGCAGT TAG
chr18_32022704_32023022 8 1.68e-05 TCACTTG GAGCTGCAGT CAA
chr12_16511088_16511319 8 1.68e-05 TCCCCCA GAGCTGCAGT CAC
chr10_20091963_20092149 8 1.68e-05 TCTCCAG GAGCTGGAGC GAC
chr1_126571097_126571266 8 1.68e-05 TCACAAG GAGCTGCAGT TAA
chr8_122170233_122170363 8 1.87e-05 TCCCCTG GATCTGGAGT GAC
chr7_38927219_38927492 8 1.87e-05 TCCCCTG CAACTGGAGT TCC
chr6_54203237_54203455 8 1.87e-05 GACCCCG CAACTGGAGT TAC
chr5_138729181_138729414 8 1.87e-05 TCCTCTG GATCTGGAGT TAC
chr5_135440644_135440808 8 1.87e-05 TCCCTTG CAACTGGAGT TAA
chr4_138553145_138553324 7 1.87e-05 TCCCCA CAACTGGAGT TCCA
chr17_88712267_88712486 9 1.87e-05 TTCCACTG GATCTGGAGT TA
chr17_62659503_62659737 8 1.87e-05 TTCACTG GATCTGGAGT TAC
chr16_94642241_94642386 8 1.87e-05 CCCTCTG CAACTGGAGT TGG
chr15_97867144_97867312 8 1.87e-05 TCCCCTA GATCTGGAGT GAC
chr11_113593380_113593590 8 1.87e-05 TACCCTG CAACTGGAGT TGC
chr6_116148318_116148490 9 2.14e-05 TACCCCCA GAACTGGAGG TA
chr6_97100303_97100475 7 2.14e-05 TCTCTG GAACCGGAGT TACA
chr4_108294260_108294393 8 2.14e-05 TCCCCTA GAACTGGAGG TGG
chr4_35257987_35258175 8 2.14e-05 TCCCCTG GAACTGGAGG TAC
chr3_75665685_75665923 8 2.14e-05 TCCGTTG GAACTGGAGG TTC
chr2_174755289_174755501 8 2.14e-05 TCCCCTA GAACCGGAGT TAC
chr2_94606831_94606995 8 2.14e-05 CCCTATT GAACTGGAGG AGG
chr13_58692124_58692296 7 2.14e-05 TCCACG GAACTGGAGG TGCT
chr11_86311484_86311721 9 2.14e-05 CTCCCCTG GAACTGGAGA TG
chr11_51633492_51633801 8 2.14e-05 TGCCCTG GAACTGGAGG TAT
chr8_23998187_23998379 8 2.24e-05 TCCGTTG GAGTTGGAGT TAC
chr7_35611436_35611552 9 2.24e-05 GCTCCCTG GAGTTGGAGT TA
chr4_123648449_123648630 8 2.24e-05 TCCTGTG GAGTTGGAGT TCC
chr11_87697070_87697236 8 2.24e-05 GCTCCCG GAGTTGGAGT TAC
chr8_11355203_11355367 8 2.42e-05 TCCCCCA GAACTGGGGT TAA
chr7_36711900_36712104 5 2.42e-05 CATA GAACTGGGGT TACGGT
chr2_18435157_18435339 7 2.42e-05 TTCCTG GAACTGGACT TACA
chr18_80366724_80366981 8 2.42e-05 TCCCCTG GAACTGGACT CCC
chr17_48230494_48230670 8 2.42e-05 TCCCCTG GAACTGGACT TAA
chr17_27141443_27141742 8 2.42e-05 ACAACTG GAACTGGACT TGG
chr16_23632852_23633067 7 2.42e-05 TCCCTG GAACTGGACT TACA
chr13_98003109_98003379 8 2.42e-05 TCTCCCT GAACTGGGGT TAT
chr13_13329861_13329959 8 2.42e-05 CGTTCTA GAACTGGACT TAA
chr12_78363744_78363926 7 2.42e-05 AAGCTA GAACTGGACT TAGA
chr8_129033204_129033415 8 2.71e-05 TCTCTTG GAACAGGAGT TGA
chr8_97473055_97473227 8 2.71e-05 TCCATTA CAGCTGGAGT TAC
chr6_67103191_67103360 8 2.71e-05 TCTCTTG GAACTGTAGT TAC
chr19_47974566_47974851 9 2.71e-05 TCCCCCTG GAACAGGAGT CA
chr15_31250854_31250952 2 2.71e-05 T GAACTGTAGT AAGGACAGT
chr1_180310144_180310312 8 2.71e-05 TACCCCA CAGCTGGAGT TAT
chr9_60596972_60597219 8 3.05e-05 TCCCTGG GAGCTGGAGA ATA
chr6_22396787_22397030 8 3.05e-05 TGGCTTG GAGCTGGAGA TAC
chr5_114833321_114833580 9 3.05e-05 TGCTCCTG GAGCTGGAGG TA
chr4_132379519_132379881 8 3.05e-05 TTCCTTA GAGCTGGAGG TAC
chr4_21686131_21686318 8 3.05e-05 TCTCTTG GAAGTGGAGT TAC
chr15_86035804_86036028 8 3.05e-05 TTCCCAG GAAGTGGAGT TAC
chr15_75923267_75923448 8 3.05e-05 TCCCCTG GAAGTGGAGT AAC
chr13_54621654_54621891 4 3.05e-05 GAT GAGCTGGAGG TGGGCGG
chr1_138636155_138636455 8 3.05e-05 TCGCCTG GAAGTGGAGT TAC
chr1_58859260_58859617 1 3.05e-05 GAGCTGGAGG GTAGAGCCTC
chr6_99250671_99250886 8 3.24e-05 TCCCCTG AGACTGGAGT TAT
chr2_156112568_156112757 8 3.24e-05 TCCCCTG AGACTGGAGT GAC
chr19_56883333_56883580 7 3.24e-05 GCCCTG GCACTGGAGT GACA
chr19_32587112_32587353 7 3.24e-05 GCCCTG GCACTGGAGT TGCA
chr17_48038904_48039064 8 3.24e-05 TCCCCTG AGACTGGAGT TGG
chr1_89560632_89560828 7 3.24e-05 TCCTTT AGACTGGAGT TAGA
chr9_70050676_70050888 8 3.61e-05 TGCTCTG GAAATGGAGT GAC
chr8_58999958_59000172 6 3.61e-05 ACTGG GAGCTGGACT GAGAT
chr7_130476486_130476840 3 3.61e-05 CT GAGCTGGGGT GTCCAGGT
chr5_149690903_149691063 8 3.61e-05 TCCCCTG GAAATGGAGT CAC
chr5_23255810_23256029 8 3.61e-05 TCCTCTG GAGCTGGGGT TCC
chr3_127444473_127444670 8 3.61e-05 TCTCCTG GAACTTGAGT TGC
chr3_96449233_96449462 9 3.61e-05 AAGGTAGA GAGCTGGACT AA
chr2_27373880_27374146 7 3.61e-05 TCCTCT GAGCTGGACT CACA
chr19_3374107_3374351 8 3.61e-05 TCCCTTG GAGCTGGGGT TAA
chr17_35832341_35832544 8 3.61e-05 ACTCCTA GAACTTGAGT TAC
chr13_25001075_25001257 8 3.61e-05 TCACCTA GAAATGGAGT TAT
chr10_14405579_14405788 8 3.61e-05 TCCCCTA GAACTTGAGT GAC
chr1_13141273_13141505 8 3.61e-05 TCACCAG GAAATGGAGT TAC
chr9_59330273_59330512 7 4.30e-05 TCCCCA GAGCTGTAGT GTGA
chr8_75192955_75193148 7 4.30e-05 CCCCTG GAGCAGGAGT CACA
chr7_82890940_82891177 8 4.30e-05 TCCCTTG AAACTGAAGT TAC
chr6_115702790_115703002 8 4.30e-05 TCCCCTG GGACTAGAGT TTC
chr6_13363874_13364104 7 4.30e-05 TCCCTG GAGCAGGAGT CCCA
chr5_143616680_143616861 8 4.30e-05 TTCCGTG GGACTGAAGT TAC
chr5_123344044_123344309 8 4.30e-05 TCTCCTG GAACTGGTGT TAC
chr4_105766005_105766173 8 4.30e-05 TCCCCTG GGACTAGAGT TAG
chr4_46557287_46557526 8 4.30e-05 CTCTCAG AAACTAGAGT TAG
chr2_162915558_162915839 9 4.30e-05 CTTCCCTA GAACTGGTGT AA
chr2_36069973_36070287 8 4.30e-05 TCCCTTA GGACTAGAGT TTC
chr19_24339553_24339823 8 4.30e-05 TCTTCTG GAGCTGTAGT CAC
chr19_5407176_5407454 6 4.30e-05 CACTG AAACTGAAGT TACAG
chr15_98516435_98516604 8 4.30e-05 GTCTCTG AAACTGAAGT TAC
chr15_82753253_82753484 7 4.30e-05 GTCCCT GAGCTGTAGT CCCA
chr14_47398939_47399102 8 4.30e-05 TCCTCTG AAACTAGAGT ACA
chr10_43155683_43155865 8 4.30e-05 TCCCCTA GGACTAGAGT CAT
chr9_69155029_69155228 5 4.69e-05 CCTG GAACTGGATT AACGTG
chr5_121830860_121831072 8 4.69e-05 TCCCCTG GAACTGGATT TAT
chr4_83173910_83174128 7 4.69e-05 TCTCTG GAACTGGATT TACA
chr3_54597790_54597998 8 4.69e-05 TACTACG AAACTGGAAT TAC
chr2_179822301_179822506 8 4.69e-05 GGCCCTG AAACTGGAAT TAC
chr2_173280284_173280449 9 4.69e-05 CTTCCCTG GAACTGGATT GA
chr19_15723936_15724185 1 4.69e-05 GAGGTGGAGT CCTGCCCAGT
chr16_91724576_91724829 8 4.69e-05 TCCCCTA GGACTGGAAT TAC
chr16_35913682_35913895 8 4.69e-05 ACTCCCA AAACTGGAAT TAC
chr14_58187687_58187919 6 4.69e-05 CTCTG AAACTGGAAT TGCAG
chr13_99102148_99102369 7 4.69e-05 TCCCTA GAGGTGGAGT TACC
chr10_66655205_66655429 8 4.69e-05 GTCCCTG AAACTGGAAT TAC
chr9_112696137_112696339 7 5.43e-05 TCCCAT GGACTGCAGT TACA
chr8_46429003_46429167 3 5.43e-05 TC AAACTGGAGC CATAGTGT
chr7_18686233_18686417 10 5.43e-05 GATCTGTGA AAACTGCAGT C
chr5_150977609_150977770 8 5.43e-05 TCTCCTA GGACTGGAGC TAC
chr5_23356121_23356333 7 5.43e-05 GGGCCG GCGCTGGAGT CAGG
chr4_47033497_47033731 7 5.43e-05 TTCCCG AGGCTGGAGT TAAA
chr12_56083111_56083240 8 5.43e-05 CTGCCTG GAACTAAAGT TAC
chr11_84081643_84081863 8 5.43e-05 TCTTGGG AAACTGGAGC TAC
chr10_70642959_70643141 8 5.43e-05 TACCCCA GTACTGGAGT TAC
chr9_121193629_121193923 8 5.84e-05 TCTCCCG GAACTGAAAT TAC
chr4_140808665_140808901 8 5.84e-05 ATCTCGA GAACTAGAAT TAC
chr4_103021941_103022178 8 5.84e-05 TTCCCTG GAACTAGAAT TGC
chr1_186641704_186641927 8 5.84e-05 TTCCATG GAGCTTGAGT TAC
chr9_119715762_119715899 8 6.86e-05 TCCTCTG GGCCTGGAGT TAC
chr9_56262243_56262437 8 6.86e-05 TCCCCTG GAACTAGAGC CAC
chr5_149883225_149883374 8 6.86e-05 TCTGCCA GAACTAGAGC TAA
chr4_101034454_101034666 8 6.86e-05 CCTCCTA GGCCTGGAGT TAA
chr3_108331552_108331692 8 6.86e-05 TCCTCTA GGCCTGGAGT TAC
chr18_77166349_77166557 8 6.86e-05 TCCTTTG GAACTGGCGT TAT
chr17_29921902_29922098 2 6.86e-05 T GGCCTGGAGT TGAAGTTAC
chr16_44741950_44742127 8 6.86e-05 TTCTCTG AAGCTAGAGT TAC
chr11_106966596_106966853 8 6.86e-05 CACCTTG GAACTAGAGC GAC
chr11_75717017_75717378 8 6.86e-05 TCCTCTG AAGCTGAAGT TGC
chr9_26983838_26984142 1 7.55e-05 GGGCTGGAAT AACTGGAGGC
chr8_26853366_26853676 8 7.55e-05 GCCCCCT GAACTGGAAC TGC
chr7_143334624_143334797 8 7.55e-05 ACCCCTG AAATTGGAGT TAC
chr6_91079175_91079331 8 7.55e-05 TCCCCTG AAATTGGAGT TAT
chr5_144046513_144046699 8 7.55e-05 CTCCCAG GAACTGCAAT TAC
chr19_4908177_4908412 8 7.55e-05 TCCCCTG GGGCTGGAAT TAC
chr11_77055288_77055456 8 7.55e-05 TTCTCCT AAATTGGAGT TAC
chr11_69529150_69529292 7 7.55e-05 TGCCCA GGATTGGAGT TACG
chr7_148770478_148770655 8 8.36e-05 TCCCCTG GACCTAGAGT TTG
chr7_134218736_134218925 8 8.36e-05 TCCTCTG GACCTAGAGT GAC
chr7_127834328_127834473 9 8.36e-05 TTCCCCTG AAGCTGGAGC TA
chr5_136379828_136380106 9 8.36e-05 GGACGTCG GTGCTGGAGT CA
chr4_135186179_135186401 8 8.36e-05 TCCACAA GTGCTGGAGT TGT
chr2_52712830_52713052 8 8.36e-05 CCCCCTG GAACTGCAGC CAC
chr17_28521349_28521505 8 8.36e-05 TCCCACA GACCTGAAGT TAG
chr15_90055674_90055999 8 8.36e-05 TCCTCTG GACCTAGAGT CAC
chr14_48674515_48674694 8 8.36e-05 ACCCTTG GAGCTAAAGT AGC
chr14_33005707_33005952 2 8.36e-05 C GTGCTGGAGT TGGCCTTAG
chr14_21299073_21299381 9 8.36e-05 GTAGAAAG GAACTGCAGC TT
chr9_114298538_114298788 8 9.26e-05 TCCCTTG GAGCTGAAAT TAG
chr9_108987508_108987811 7 9.26e-05 TCCCTG TAACTGGAGT TTTA
chr7_53716060_53716244 9 9.26e-05 CTTCCCTG GAATTAGAGT TA
chr7_29800108_29800345 8 9.26e-05 TCCCCTG GAGCTGAAAT TAC
chr6_142807518_142807792 7 9.26e-05 TCCCTA GAGCTGAAAT TTGT
chr6_120407146_120407377 8 9.26e-05 TCCCCTG GAATTAGAGT TTC
chr6_120251231_120251536 1 9.26e-05 GAGCTGAAAT GTGCAGAAGA
chr5_122216505_122216717 6 9.26e-05 TCCCC TAACTGGAGT TAACA
chr5_118391640_118391880 7 9.26e-05 GTCCTG GAGCTAGAAT TACA
chr4_102931551_102931729 8 9.26e-05 TCTCCTG TAACTGGAGT GAC
chr19_42851332_42851611 8 9.26e-05 TCACTTA GAATTGAAGT TAC
chr10_42661783_42662072 2 9.26e-05 A GACCTGGAAT CAGCCAGAA
chr1_182160770_182161055 9 9.26e-05 TTCCCGTT GAATTGAAGT TA
chr1_174092242_174092455 8 9.26e-05 TTCCTTA GAATTAGAGT TAT
chr9_70976727_70977001 8 1.04e-04 TCATCTG AAACTGGAGA TGG
chr9_57857513_57857735 8 1.04e-04 TCCCCTG GGACTGGAGA TAC
chr8_79964579_79964696 8 1.04e-04 TCCTCCG AAACCGGAGT TTC
chr7_82698612_82698810 8 1.04e-04 TCCTTTA GACCTGGAGC TGT
chr5_148772484_148772650 8 1.04e-04 TCCCCTG AAACTGGAGA TAC
chr4_11093721_11093980 6 1.04e-04 CACAG GGACTGGAGA CACAG
chr2_164777383_164777678 8 1.04e-04 TCACTTA GGACTGGAGA AGC
chr2_164731715_164731865 7 1.04e-04 TACCTG GAGCTACAGT TACA
chr16_89941070_89941226 8 1.04e-04 TCCCCTG GAGCTGGCGT TGC
chr16_22354397_22354622 8 1.04e-04 TCCCCTG GAGCTAGAGC TGG
chr13_114047469_114047688 8 1.04e-04 TCTCCTG GGACTGGAGG TGC
chr13_55841040_55841262 8 1.04e-04 CCCCCTG GAGCTAGAGC TGC
chr10_42324770_42325052 7 1.04e-04 TTACCA AAACTGGAGA CACG
chr1_10172009_10172183 8 1.04e-04 CGCCCTG GACCTGGAGC TAC
chr6_99477545_99477740 8 1.14e-04 TCCTCTG AAGTTGGAGT TAC
chr5_115081391_115081625 8 1.14e-04 TTCCCTG GATCTAGAGT TCA
chr5_31300746_31300986 7 1.14e-04 CCCCCG GGGTTGGAGT TACA
chr13_96241026_96241253 8 1.14e-04 TCCTATG GAGCTGGAAC TAC
chr1_120373537_120373799 8 1.14e-04 CTCCCTG GAATTGCAGT CAC
chr9_104121425_104121617 8 1.26e-04 TCCCCTG CAACTGGAAT AAT
chr9_71942574_71942774 8 1.26e-04 TATCCTG GAACCAGAGT TAC
chr7_93360002_93360236 8 1.26e-04 GTACCAT AAACTGGACT CCC
chr7_52641534_52641736 8 1.26e-04 TCCCCTG GATCTGGAAT TAC
chr5_145802544_145802836 8 1.26e-04 GTCTATG GAACCAGAGT TAC
chr5_100357089_100357312 7 1.26e-04 TCCCAT GATCTGGAAT GTGA
chr4_141147581_141147798 8 1.26e-04 TCCCCCT GAGCTGCAGC TAC
chr14_32138189_32138323 8 1.26e-04 ACCCCTG GATCTGGAAT TAC
chr11_46037184_46037356 10 1.26e-04 CCTCCCCCA GAACCAGAGT T
chr11_43458932_43459096 9 1.26e-04 CCCCTTTG GAACCAGAGT TA
chr8_73812411_73812672 8 1.42e-04 TCACCTG CAACTGCAGT TGC
chr8_24279474_24279757 4 1.42e-04 AGG CAACTGGAGC CGTGAGC
chr4_40900627_40900884 8 1.42e-04 TCCCTTG GAGTTAGAGT CCC
chr3_51008504_51008688 7 1.42e-04 TCCCTG AAACTGTAGT AACA
chr19_56082013_56082228 8 1.42e-04 TCCCCTG GATCTGGAGC GGC
chr16_31458308_31458610 7 1.42e-04 CCCCCT CAACTGGAGC CTGC
chr11_69964702_69964880 8 1.42e-04 TCCCTGG AAACTGTAGT TAC
chr11_11711982_11712328 11 1.42e-04 CTCCAGTGAG CAACTGCAGT
chr10_19349764_19349850 5 1.42e-04 TCTA GGACAGGAGT GATGTC
chr8_127504856_127505062 8 1.57e-04 TCCTCCG GAACTGAGGT TAT
chr8_119706791_119706929 7 1.57e-04 TTCCAG GGAGTGGAGT TACA
chr8_3464365_3464593 8 1.57e-04 ACCCTGG AAGCTGGAGG TAG
chr4_11218640_11218801 7 1.57e-04 TCCCTA GAACTAGACT GTGG
chr3_53133563_53133757 8 1.57e-04 TCCCCTG AAAGTGGAGT TAA
chr2_4946368_4946590 10 1.57e-04 TCTTGCTGG GAACTGAACT C
chr16_90374850_90375022 7 1.57e-04 TCCCCT AAGCTGGAGA TCAG
chr15_87022446_87022606 8 1.57e-04 TCTTCTG GAACTGCAGA CAC
chr14_55406171_55406433 8 1.57e-04 ACTCCTG AAAGTGGAGT TCC
chr11_48664859_48665125 8 1.57e-04 TCCCTTG AAGCTGGAGA CCT
chr10_4486520_4486726 9 1.57e-04 TTCCCTTT GAACTAGGGT TC
chr1_37693146_37693392 7 1.57e-04 AGACTG AAGCTGGAGA ACCA
chr7_133720552_133720751 8 1.67e-04 TGCCTTG GAGTTGCAGT TAC
chr2_30155137_30155319 8 1.67e-04 TCCCCTG GAACTGGGAT CTT
chr17_32866109_32866318 8 1.67e-04 TCATTTA GAACTGGGAT TAC
chr12_72931605_72931823 9 1.67e-04 GCCCAACC GAACAGAAGT GC
chr9_32369997_32370245 6 1.93e-04 GAGCA GAGCTGAAGA GCTGA
chr7_108261972_108262219 8 1.93e-04 TTCTGTG GAGCCAGAGT TGC
chr7_25148312_25148485 8 1.93e-04 TTCCTTG GAGCCAGAGT CAC
chr6_90575697_90575888 8 1.93e-04 TTCCCTG GGACTTGAGT TAC
chr5_122712184_122712469 8 1.93e-04 TCCCCTG GAGCCAGAGT TAG
chr4_150282658_150282889 8 1.93e-04 TCCCCTG GACCTGGAGA TGC
chr3_97328827_97329038 9 1.93e-04 TCCTCTCA GAGCCAGAGT TA
chr3_94615687_94615860 8 1.93e-04 TCCCCTG GAGCTGAAGG GTC
chr19_45796814_45797003 7 1.93e-04 TCCCAG GAGCCAGAGT TAGA
chr17_71604140_71604294 9 1.93e-04 AGGAGAGG GGGCTGGGGT GT
chr15_98651899_98652084 8 1.93e-04 TCCCCCG GAACTGGGGC TAC
chr14_55436757_55436917 7 1.93e-04 TCCCCA GAAGTAGAGT TACA
chr14_51418246_51418528 8 1.93e-04 TACCCTG GAGCTAGAGA CAG
chr13_8847027_8847200 8 1.93e-04 TCCATTG GGGCTGGACT TAA
chr12_103836883_103837037 8 1.93e-04 TCTCCTA GGAATGGAGT TAC
chr11_103211134_103211356 9 1.93e-04 TCTCTCTG GAGCCAGAGT TA
chr11_17752483_17752670 8 1.93e-04 GCTGCTC GAGCTGAAGG TGT
chr9_120286863_120287257 9 2.13e-04 GCACTTGG GAGCTGGAAG GT
chr9_54779686_54779905 8 2.13e-04 TCCCCTG GCACTAGAGT TAG
chr8_26359894_26359996 8 2.13e-04 TTCCATG GAACAGCAGT TAC
chr6_148776779_148776920 7 2.13e-04 TCTCTA GAATTGGAGA TAGG
chr5_130291497_130291647 8 2.13e-04 TCCTATA GGGCTGTAGT TGT
chr5_119154284_119154476 8 2.13e-04 TCCTCCA GGACTGGTGT TAA
chr4_135086260_135086473 8 2.13e-04 ACCTCTG GAACTGTAGC TAT
chr4_124362336_124362554 9 2.13e-04 TGCCATCG AAACTGGTGT TA
chr2_180295058_180295226 8 2.13e-04 TCCCCTA GAATCGGAGT TAC
chr2_154599833_154600063 8 2.13e-04 AGCCCTT AAACTGGTGT TAC
chr2_29942970_29943189 7 2.13e-04 CACCTG AAGCAGGAGT GGCT
chr17_66570670_66570959 1 2.13e-04 GGGCAGGAGT GAGAACAACG
chr17_47566047_47566279 9 2.13e-04 GGCTCTAA CAGCTGCAGT GT
chr15_63765720_63765856 11 2.13e-04 GTTGAGTACA GGACTGGTGT
chr11_6266047_6266352 11 2.13e-04 GAGAGCAATG CAGCTGGAGC
chr1_133225779_133225907 8 2.13e-04 TCCTGTG GGGCTGTAGT TAG
chr9_57535995_57536194 9 2.34e-04 TTCCCTTG AGACTGGAAT TA
chr9_31896554_31896787 6 2.34e-04 CCTCT GACCTGGGGT TACAG
chr7_25754879_25755098 11 2.34e-04 AGATGGCGAG GAGCTGCAGA
chr7_13577662_13577876 6 2.34e-04 AACAT GAAATGAAGT ACCTT
chr5_100774230_100774424 8 2.34e-04 CCCTATG GAAGTGGAGC TGG
chr2_117613186_117613382 8 2.34e-04 TCTGTGG CATCTGGAGT TAC
chr17_57358683_57359076 8 2.34e-04 TCCCCTG GAGCTGCAGG GAG
chr17_34942242_34942451 7 2.34e-04 ACTGCA GAAATAGAGT TGCA
chr13_98708876_98709172 1 2.34e-04 GAGCTGAACT GATTTCCACT
chr13_73555312_73555607 8 2.34e-04 CTGAGTG GAGCCGCAGT CAG
chr13_51704680_51704890 3 2.34e-04 TC CATCTGGAGT TACAGATG
chr13_46928482_46928613 9 2.34e-04 TTCCCCCG GAACTTAAGT CA
chr11_116532273_116532654 1 2.34e-04 GAGCTGCAGG GGCGACCGTC
chr11_102145302_102145561 8 2.34e-04 TCTCCAT GAGCTAGGGT TAC
chr9_63179166_63179389 9 2.59e-04 TTCCCCTA GAACTGATGT TT
chr7_150798260_150798440 8 2.59e-04 TCCCTTA GACCAGGAGT TAC
chr5_121442111_121442334 7 2.59e-04 CCCACT GAGCAAGAGT TACA
chr4_151349575_151349819 8 2.59e-04 TTCATTA GAACTTGAAT TAT
chr3_87331114_87331397 1 2.59e-04 GAGCAGAAGT TCGTCATCGT
chr2_172656647_172657025 1 2.59e-04 GAGCAGAAGT TGCCTCAGGG
chr2_105151674_105151933 4 2.59e-04 GGT GAGCAGAAGT AGCTATT
chr19_6393060_6393308 4 2.59e-04 CCT AGACTGCAGT TACAGAA
chr14_28621304_28621601 5 2.59e-04 GAAT GAGCTATAGT TTGTTC
chr7_140074125_140074379 8 2.87e-04 TCCTCTG GAACTAGATT TAC
chr5_141259634_141259885 8 2.87e-04 TAGCTCA GAGGTAGAGT TAC
chr4_86234199_86234415 8 2.87e-04 GTCTCTG GAATAGGAGT TAT
chr16_90135981_90136143 9 2.87e-04 TGCCCTGG GAATTGTAGT CC
chr13_73570015_73570262 9 2.87e-04 GGAATGAA AAACTAGAAT AC
chr13_35863804_35864267 1 2.87e-04 GAGCTGCGGT TCCAGAAACC
chr11_105826203_105826342 8 2.87e-04 CCCCCAG AAGATGGAGT TAC
chr11_99154173_99154482 8 2.87e-04 TCCTCTG CAGTTGGAGT TAC
chr1_161992142_161992487 8 2.87e-04 TCCCCTA GAATAGGAGT CAC
chr8_120170024_120170237 7 3.16e-04 TCCCCA GAACTGCTGT GAGT
chr7_129444853_129445008 8 3.16e-04 TTACTTA AAGCTGGTGT TTA
chr4_118814875_118815144 8 3.16e-04 TCCCCTA GATCTGGGGT TAC
chr18_62104333_62104571 1 3.16e-04 GAGCAGCAGT GTTTCCCTCC
chr12_85629426_85629737 7 3.16e-04 CCCCTG GAACTGGTGC AGCC
chr10_60159760_60160142 8 3.16e-04 CACTGCA GATCTGGACT CCC
chr1_20822604_20822798 8 3.16e-04 TCCCTTG GTACTAGAGT TAG
chr5_115726080_115726304 7 3.46e-04 CACCTG AAACTGGAAC TAGG
chr5_24512688_24512990 4 3.46e-04 CTA GAACTGCATT AGGTGCC
chr4_3710702_3710882 8 3.46e-04 TCCCCTG AGATTGGAGT TGG
chr2_25112378_25112608 8 3.46e-04 GTCCGTG AAACTGCAAT CGG
chr18_32712482_32712641 2 3.46e-04 A GAGGTGGAGC TAACAGTTG
chr17_89166298_89166510 8 3.46e-04 CGCTCTG GAGCTTAAGT TAC
chr13_22020489_22020740 8 3.46e-04 TCACCTG GATCAGGAGT TCC
chr11_117223672_117223952 9 3.46e-04 TGTCCCAC AAGCTGGATT AC
chr11_84057190_84057342 8 3.46e-04 TCTCCCA CAACAGGAGT TAC
chr11_53068068_53068222 8 3.46e-04 TCCCTTG AAACTGGAAC TAC
chr7_141048093_141048329 1 3.79e-04 GGACTGCAGC AGCCTCAACC
chr2_172300548_172300850 3 3.79e-04 GG GCGCTGCAGT TACAGGTG
chr2_71315890_71316145 8 3.79e-04 TTCCCTG GAGCTTGAAT TAC
chr16_8806898_8807116 8 3.79e-04 TCTCCCA GAACCGTAGT TAA
chr8_44418955_44419169 5 4.13e-04 GTGG GAGCCGGAGA GGTCAA
chr7_112405322_112405500 2 4.13e-04 G CCACTGGAGT TAAAGCCAC
chr6_121067235_121067436 8 4.13e-04 GCTCCTA AAATTGAAGT TAC
chr4_148336051_148336316 2 4.13e-04 C GCTCTGGAGT TGCCCCACC
chr3_142058239_142058478 2 4.13e-04 C GAGCCGGAGG GCAGGCGGC
chr19_36514713_36514858 10 4.13e-04 GGTCTGGGA GAACTGGGCT G
chr17_14440864_14441047 8 4.13e-04 TCCCTTA GAACTAGAAC TAC
chr15_31348859_31349092 8 4.13e-04 TCCCACG GAGATGGAGC TGT
chr14_25802891_25803095 2 4.13e-04 T CCACTGGAGT CACAGTCAG
chr10_121292964_121293214 7 4.13e-04 TCCCCT GAACTGGCAT TAAC
chr4_134240964_134241194 8 4.51e-04 TCCTCTG GATCTTGAGT TAC
chr4_128536155_128536397 8 4.51e-04 TCCCCTG AAGCTGGCGT TAT
chr4_6361766_6362046 8 4.51e-04 GCCACAG GCACCGGAGT TAC
chr2_169853410_169853684 9 4.51e-04 TCCCTGTA GGATTGGAAT TC
chr17_65885592_65885867 6 4.51e-04 CTTGG AAGCTAGAGC TATTT
chr1_88335137_88335420 11 4.51e-04 TCCCATGAAA CAAATGGAGT
chr9_57116426_57116627 1 4.95e-04 GAGCTAAAAT TTTAATTAGC
chr9_44156716_44156941 8 4.95e-04 TACCATG GAGCTGGATC AGG
chr7_52293384_52293690 9 4.95e-04 CCGCCCTG GTGCTGGAAT CA
chr3_69402847_69403043 5 4.95e-04 CAGA GAGCCGGGGT TGGAGG
chr17_49567034_49567241 8 4.95e-04 TCCCTTG GAACCTGAGT TAC
chr13_62865321_62865502 8 4.95e-04 TCCCTCT GGATTGCAGT TAC
chr11_58000518_58000682 8 4.95e-04 TCCCCTG CAGCTGTAGT CAC
chr11_31594203_31594447 8 4.95e-04 TCCCCTG GAACCTGAGT TAC
chr1_136538226_136538492 8 4.95e-04 TCTCTAG TAACTAGAGT TAA
chr8_13467148_13467326 8 5.39e-04 TCCCCTG GAACCGGTGT CAG
chr7_73200368_73200483 1 5.39e-04 GGACTAGAGA GCTGTTTTTG
chr4_14888049_14888345 11 5.39e-04 TTCACGAACG GAATTGAAAT
chr17_44377815_44378060 8 5.39e-04 CCTCCTG CAACTGGATT TAC
chr10_19413540_19413708 8 5.39e-04 TTCCCTG GGACTAGAGG TAT
chr1_39587116_39587497 8 5.39e-04 TGCCCTA GAATTAGAAT TAG
chr17_36962549_36962821 6 5.89e-04 ATCCT AGACTGTAGT CCTAG
chr17_29995797_29996082 1 5.89e-04 GAGCTAGAAC AGCCATGGCC
chr11_74343369_74343634 7 5.89e-04 TCCCCT CCGCTGGAGT TACG
chr8_3439638_3439840 7 6.40e-04 CAGGTG GAGCTGGCGC TGCT
chr3_89260683_89260925 6 6.40e-04 GGGTC GGACTGCAGG TGGGA
chr2_43642854_43643074 1 6.40e-04 GTACTGGAGA TCACAGGTAA
chr18_80692461_80692694 2 6.40e-04 A GCGCTGGAGG AGAGCGAGA
chr15_66115996_66116333 6 6.40e-04 ACACA GGACCGCAGT TTTGT
chr13_14149210_14149464 7 6.40e-04 CCATTA GGACTAGACT TAAG
chr13_68708518_68708842 8 7.61e-04 ACACCAG GAACTGTATT TCA
chr10_114821637_114822240 6 7.61e-04 AGAGG GAACTGGCGA GCGAC
chr6_53984511_53984810 8 1.06e-03 AGCTGGC GATTTGCAGT GGC
chr5_125512634_125512849 6 1.06e-03 GAGTC GTACTTGAGT GGGGT
chr3_29914278_29914487 5 1.06e-03 TCCC GAAATAAAGT ACAGTG
chr18_56697795_56698052 8 1.06e-03 TTCCACG GCGATGGAGT TGG
chr2_13497051_13497519 5 1.24e-03 AGCA GACGTGAAGT TCTGCA
chr8_74001479_74001832 8 1.35e-03 TCCCCTG GAACGGAAGT TAC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
chr1_10172009_10172183 1.04e-04
chr1_13141273_13141505 3.61e-05
chr1_20822604_20822798 3.16e-04
chr1_33593571_33593726 1.32e-05
chr1_37523509_37523772 1.51e-05
chr1_37693146_37693392 1.57e-04
chr1_39587116_39587497 5.39e-04
chr1_58859260_58859617 3.05e-05
chr1_70833850_70834031 3.73e-06
chr1_84467037_84467187 1.51e-05
chr1_88049258_88049490 3.73e-06
chr1_88301525_88301724 5.77e-06
chr1_88335137_88335420 4.51e-04
chr1_89560632_89560828 3.24e-05
chr1_91909539_91909778 5.77e-06
chr1_120373537_120373799 1.14e-04
chr1_126571097_126571266 1.68e-05
chr1_133225779_133225907 2.13e-04
chr1_135933128_135933351 9.48e-07
chr1_136332077_136332248 3.73e-06
chr1_136538226_136538492 4.95e-04
chr1_138636155_138636455 3.05e-05
chr1_139123169_139123390 5.77e-06
chr1_161992142_161992487 2.87e-04
chr1_162720854_162720980 9.48e-07
chr1_163070240_163070442 9.48e-07
chr1_163320321_163320510 1.32e-05
chr1_169236694_169236941 3.73e-06
chr1_171880878_171881090 5.77e-06
chr1_174092242_174092455 9.26e-05
chr1_180310144_180310312 2.71e-05
chr1_182160770_182161055 9.26e-05
chr1_184396150_184396369 9.48e-07
chr1_186641704_186641927 5.84e-05
chr1_192736628_192736799 9.48e-07
chr10_4486520_4486726 1.57e-04
chr10_14405579_14405788 3.61e-05
chr10_19349764_19349850 1.42e-04
chr10_19413540_19413708 5.39e-04
chr10_20015924_20016052 9.48e-07
chr10_20091963_20092149 1.68e-05
chr10_21057082_21057321 5.77e-06
chr10_42324770_42325052 1.04e-04
chr10_42661783_42662072 9.26e-05
chr10_43155683_43155865 4.30e-05
chr10_50635560_50635722 3.73e-06
chr10_58841619_58841797 1.83e-06
chr10_60075686_60075947 9.48e-07
chr10_60159760_60160142 3.16e-04
chr10_66655205_66655429 4.69e-05
chr10_70642959_70643141 5.43e-05
chr10_93587267_93587458 5.77e-06
chr10_93610167_93610747 5.77e-06
chr10_114821637_114822240 7.61e-04
chr10_120864267_120864565 9.48e-07
chr10_121292964_121293214 4.13e-04
chr10_122427737_122427943 9.48e-07
chr11_6266047_6266352 2.13e-04
chr11_11711982_11712328 1.42e-04
chr11_17752483_17752670 1.93e-04
chr11_22850205_22850485 1.83e-06
chr11_31594203_31594447 4.95e-04
chr11_32234165_32234379 9.48e-07
chr11_32430183_32430497 3.73e-06
chr11_32494235_32494405 3.73e-06
chr11_35517081_35517324 9.48e-07
chr11_36860256_36860510 9.48e-07
chr11_43458932_43459096 1.26e-04
chr11_46037184_46037356 1.26e-04
chr11_48664859_48665125 1.57e-04
chr11_51379533_51379787 1.83e-06
chr11_51633492_51633801 2.14e-05
chr11_52330865_52331151 9.48e-07
chr11_53068068_53068222 3.46e-04
chr11_53394143_53394355 1.51e-05
chr11_53456382_53456623 5.77e-06
chr11_57731623_57731803 1.04e-05
chr11_58000518_58000682 4.95e-04
chr11_58625610_58625786 9.48e-07
chr11_69344385_69344550 3.73e-06
chr11_69529150_69529292 7.55e-05
chr11_69964702_69964880 1.42e-04
chr11_74343369_74343634 5.89e-04
chr11_75589567_75589763 5.77e-06
chr11_75717017_75717378 6.86e-05
chr11_76224376_76224634 1.32e-05
chr11_77055288_77055456 7.55e-05
chr11_79856474_79856657 1.83e-06
chr11_82433071_82433204 1.32e-05
chr11_84057190_84057342 3.46e-04
chr11_84081643_84081863 5.43e-05
chr11_85084273_85084433 3.73e-06
chr11_86311484_86311721 2.14e-05
chr11_87697070_87697236 2.24e-05
chr11_88095323_88095484 1.83e-06
chr11_89897878_89898093 9.48e-07
chr11_99154173_99154482 2.87e-04
chr11_102145302_102145561 2.34e-04
chr11_102715187_102715393 6.78e-06
chr11_103211134_103211356 1.93e-04
chr11_104312647_104312829 1.32e-05
chr11_105826203_105826342 2.87e-04
chr11_106966596_106966853 6.86e-05
chr11_109283641_109283838 1.83e-06
chr11_109302527_109302799 9.48e-07
chr11_113593380_113593590 1.87e-05
chr11_114775825_114776003 3.73e-06
chr11_116532273_116532654 2.34e-04
chr11_117223672_117223952 3.46e-04
chr11_117735830_117735967 1.32e-05
chr12_16393318_16393518 9.48e-07
chr12_16511088_16511319 1.68e-05
chr12_16577562_16577782 5.77e-06
chr12_33965653_33966007 9.48e-07
chr12_56083111_56083240 5.43e-05
chr12_70434644_70434861 3.73e-06
chr12_72931605_72931823 1.67e-04
chr12_73755822_73755994 9.48e-07
chr12_78363744_78363926 2.42e-05
chr12_81300790_81300985 6.78e-06
chr12_85629426_85629737 3.16e-04
chr12_85880636_85880792 1.83e-06
chr12_103836883_103837037 1.93e-04
chr12_112608631_112608862 1.51e-05
chr12_118425681_118425937 9.48e-07
chr12_118690048_118690264 1.32e-05
chr13_8847027_8847200 1.93e-04
chr13_11917946_11918158 1.32e-05
chr13_13329861_13329959 2.42e-05
chr13_14149210_14149464 6.40e-04
chr13_22020489_22020740 3.46e-04
chr13_24082778_24083004 1.83e-06
chr13_24591415_24591696 1.04e-05
chr13_25001075_25001257 3.61e-05
chr13_25236069_25236277 1.32e-05
chr13_35863804_35864267 2.87e-04
chr13_46928482_46928613 2.34e-04
chr13_49252087_49252299 1.04e-05
chr13_51704680_51704890 2.34e-04
chr13_51825111_51825494 5.77e-06
chr13_52928598_52928983 1.51e-05
chr13_54621654_54621891 3.05e-05
chr13_54824582_54824799 1.04e-05
chr13_55494320_55494652 9.48e-07
chr13_55841040_55841262 1.04e-04
chr13_58692124_58692296 2.14e-05
chr13_62865321_62865502 4.95e-04
chr13_68708518_68708842 7.61e-04
chr13_73555312_73555607 2.34e-04
chr13_73570015_73570262 2.87e-04
chr13_96241026_96241253 1.14e-04
chr13_98003109_98003379 2.42e-05
chr13_98708876_98709172 2.34e-04
chr13_99102148_99102369 4.69e-05
chr13_101614008_101614195 1.83e-06
chr13_114047469_114047688 1.04e-04
chr14_21299073_21299381 8.36e-05
chr14_25802891_25803095 4.13e-04
chr14_28621304_28621601 2.59e-04
chr14_32138189_32138323 1.26e-04
chr14_33005707_33005952 8.36e-05
chr14_33283404_33283589 9.48e-07
chr14_47398939_47399102 4.30e-05
chr14_48674515_48674694 8.36e-05
chr14_51418246_51418528 1.93e-04
chr14_55406171_55406433 1.57e-04
chr14_55436757_55436917 1.93e-04
chr14_58187687_58187919 4.69e-05
chr14_118281528_118281845 1.32e-05
chr14_119402646_119402885 9.48e-07
chr15_27835088_27835384 3.73e-06
chr15_31250854_31250952 2.71e-05
chr15_31348859_31349092 4.13e-04
chr15_63765720_63765856 2.13e-04
chr15_66115996_66116333 6.40e-04
chr15_75923267_75923448 3.05e-05
chr15_79648875_79649031 5.77e-06
chr15_81592512_81592731 1.83e-06
chr15_82753253_82753484 4.30e-05
chr15_83196226_83196410 9.48e-07
chr15_84509636_84509856 1.83e-06
chr15_86035804_86036028 3.05e-05
chr15_87022446_87022606 1.57e-04
chr15_90055674_90055999 8.36e-05
chr15_91131820_91132130 3.73e-06
chr15_97867144_97867312 1.87e-05
chr15_98516435_98516604 4.30e-05
chr15_98651899_98652084 1.93e-04
chr15_99646504_99646653 9.48e-07
chr16_8806898_8807116 3.79e-04
chr16_20089865_20090037 1.83e-06
chr16_22354397_22354622 1.04e-04
chr16_23632852_23633067 2.42e-05
chr16_27140211_27140463 1.51e-05
chr16_29785327_29785472 9.48e-07
chr16_31458308_31458610 1.42e-04
chr16_35913682_35913895 4.69e-05
chr16_36469067_36469323 1.51e-05
chr16_44741950_44742127 6.86e-05
chr16_84550787_84550967 5.77e-06
chr16_89941070_89941226 1.04e-04
chr16_90135981_90136143 2.87e-04
chr16_90374850_90375022 1.57e-04
chr16_90381936_90382234 3.73e-06
chr16_91582645_91582835 9.48e-07
chr16_91724576_91724829 4.69e-05
chr16_94642241_94642386 1.87e-05
chr16_97814760_97815065 1.04e-05
chr17_5316451_5316713 5.77e-06
chr17_14440864_14441047 4.13e-04
chr17_27141443_27141742 2.42e-05
chr17_27901541_27901705 5.77e-06
chr17_28521349_28521505 8.36e-05
chr17_29921902_29922098 6.86e-05
chr17_29995797_29996082 5.89e-04
chr17_30872525_30872692 3.73e-06
chr17_32866109_32866318 1.67e-04
chr17_34346739_34346960 3.73e-06
chr17_34942242_34942451 2.34e-04
chr17_35028454_35028639 1.32e-05
chr17_35832341_35832544 3.61e-05
chr17_36962549_36962821 5.89e-04
chr17_44377815_44378060 5.39e-04
chr17_47249638_47249782 3.73e-06
chr17_47566047_47566279 2.13e-04
chr17_47980547_47980804 1.83e-06
chr17_48038904_48039064 3.24e-05
chr17_48230494_48230670 2.42e-05
chr17_49498640_49498811 1.04e-05
chr17_49567034_49567241 4.95e-04
chr17_57358683_57359076 2.34e-04
chr17_62659503_62659737 1.87e-05
chr17_65885592_65885867 4.51e-04
chr17_66570670_66570959 2.13e-04
chr17_71604140_71604294 1.93e-04
chr17_78440666_78440855 3.73e-06
chr17_88466924_88467138 1.51e-05
chr17_88712267_88712486 1.87e-05
chr17_89166298_89166510 3.46e-04
chr18_32022704_32023022 1.68e-05
chr18_32712482_32712641 3.46e-04
chr18_34418846_34419193 1.83e-06
chr18_35532591_35532757 3.73e-06
chr18_56697795_56698052 1.06e-03
chr18_58758874_58759067 1.68e-05
chr18_61018109_61018397 9.48e-07
chr18_62104333_62104571 3.16e-04
chr18_69894768_69894982 9.48e-07
chr18_77166349_77166557 6.86e-05
chr18_80366724_80366981 2.42e-05
chr18_80692461_80692694 6.40e-04
chr19_3374107_3374351 3.61e-05
chr19_4908177_4908412 7.55e-05
chr19_5407176_5407454 4.30e-05
chr19_5428181_5428349 9.48e-07
chr19_6018152_6018448 1.04e-05
chr19_6393060_6393308 2.59e-04
chr19_6684072_6684299 1.04e-05
chr19_15723936_15724185 4.69e-05
chr19_24339553_24339823 4.30e-05
chr19_30902486_30902631 1.32e-05
chr19_32587112_32587353 3.24e-05
chr19_36514713_36514858 4.13e-04
chr19_42851332_42851611 9.26e-05
chr19_45796814_45797003 1.93e-04
chr19_46464514_46464633 3.73e-06
chr19_47563827_47564051 9.48e-07
chr19_47974566_47974851 2.71e-05
chr19_56082013_56082228 1.42e-04
chr19_56883333_56883580 3.24e-05
chr19_59184452_59184672 9.48e-07
chr2_4946368_4946590 1.57e-04
chr2_13497051_13497519 1.24e-03
chr2_17754482_17754708 9.48e-07
chr2_18435157_18435339 2.42e-05
chr2_22863221_22863431 9.48e-07
chr2_25112378_25112608 3.46e-04
chr2_27373880_27374146 3.61e-05
chr2_29942970_29943189 2.13e-04
chr2_30155137_30155319 1.67e-04
chr2_30314833_30315060 9.48e-07
chr2_31329506_31329816 9.48e-07
chr2_32698125_32698399 1.83e-06
chr2_35727093_35727326 1.83e-06
chr2_36069973_36070287 4.30e-05
chr2_43642854_43643074 6.40e-04
chr2_52712830_52713052 8.36e-05
chr2_52944704_52944973 1.51e-05
chr2_57215037_57215194 1.04e-05
chr2_69469622_69469834 5.77e-06
chr2_71315890_71316145 3.79e-04
chr2_79176404_79176587 1.32e-05
chr2_90514840_90515002 9.48e-07
chr2_94606831_94606995 2.14e-05
chr2_102928370_102928545 3.73e-06
chr2_103706013_103706247 5.77e-06
chr2_105151674_105151933 2.59e-04
chr2_115927012_115927245 1.83e-06
chr2_117613186_117613382 2.34e-04
chr2_128328705_128328932 1.68e-05
chr2_152397893_152398138 1.83e-06
chr2_152983078_152983333 1.04e-05
chr2_154599833_154600063 2.13e-04
chr2_154742338_154742617 1.83e-06
chr2_156112568_156112757 3.24e-05
chr2_156869805_156870021 1.32e-05
chr2_162915558_162915839 4.30e-05
chr2_164731715_164731865 1.04e-04
chr2_164777383_164777678 1.04e-04
chr2_165819987_165820194 1.04e-05
chr2_167038634_167038847 1.04e-05
chr2_167506277_167506523 5.77e-06
chr2_168934659_168934871 1.32e-05
chr2_168948490_168948692 1.04e-05
chr2_169853410_169853684 4.51e-04
chr2_172300548_172300850 3.79e-04
chr2_172656647_172657025 2.59e-04
chr2_173001309_173001526 9.48e-07
chr2_173280284_173280449 4.69e-05
chr2_174755289_174755501 2.14e-05
chr2_179822301_179822506 4.69e-05
chr2_180295058_180295226 2.13e-04
chr3_29914278_29914487 1.06e-03
chr3_40480982_40481159 9.48e-07
chr3_51008504_51008688 1.42e-04
chr3_53133563_53133757 1.57e-04
chr3_54291879_54292099 5.77e-06
chr3_54597790_54597998 4.69e-05
chr3_69402847_69403043 4.95e-04
chr3_75665685_75665923 2.14e-05
chr3_83605625_83605928 9.48e-07
chr3_84462846_84463176 9.48e-07
chr3_87331114_87331397 2.59e-04
chr3_89260683_89260925 6.40e-04
chr3_89621069_89621387 1.83e-06
chr3_94615687_94615860 1.93e-04
chr3_95665782_95666076 9.48e-07
chr3_96449233_96449462 3.61e-05
chr3_96617149_96617351 9.48e-07
chr3_97103889_97104182 1.32e-05
chr3_97328827_97329038 1.93e-04
chr3_97698669_97698964 1.51e-05
chr3_108331552_108331692 6.86e-05
chr3_127444473_127444670 3.61e-05
chr3_142058239_142058478 4.13e-04
chr3_157828052_157828277 9.48e-07
chr4_3710702_3710882 3.46e-04
chr4_6361766_6362046 4.51e-04
chr4_11093721_11093980 1.04e-04
chr4_11218640_11218801 1.57e-04
chr4_14888049_14888345 5.39e-04
chr4_21686131_21686318 3.05e-05
chr4_35257987_35258175 2.14e-05
chr4_40900627_40900884 1.42e-04
chr4_46557287_46557526 4.30e-05
chr4_46794017_46794283 1.83e-06
chr4_47033497_47033731 5.43e-05
chr4_55463975_55464279 9.48e-07
chr4_57034281_57034479 1.51e-05
chr4_83173910_83174128 4.69e-05
chr4_86234199_86234415 2.87e-04
chr4_101034454_101034666 6.86e-05
chr4_102931551_102931729 9.26e-05
chr4_103021941_103022178 5.84e-05
chr4_105766005_105766173 4.30e-05
chr4_108294260_108294393 2.14e-05
chr4_118814875_118815144 3.16e-04
chr4_122547407_122547593 1.04e-05
chr4_123648449_123648630 2.24e-05
chr4_124013119_124013275 9.48e-07
chr4_124362336_124362554 2.13e-04
chr4_127047777_127047945 6.78e-06
chr4_128536155_128536397 4.51e-04
chr4_130429476_130429726 9.48e-07
chr4_131736748_131736949 3.73e-06
chr4_132176098_132176337 1.51e-05
chr4_132379519_132379881 3.05e-05
chr4_134240964_134241194 4.51e-04
chr4_135086260_135086473 2.13e-04
chr4_135186179_135186401 8.36e-05
chr4_135708859_135709088 9.48e-07
chr4_138553145_138553324 1.87e-05
chr4_140808665_140808901 5.84e-05
chr4_141147581_141147798 1.26e-04
chr4_148336051_148336316 4.13e-04
chr4_150282658_150282889 1.93e-04
chr4_151349575_151349819 2.59e-04
chr5_3283210_3283386 3.73e-06
chr5_23255810_23256029 3.61e-05
chr5_23356121_23356333 5.43e-05
chr5_24512688_24512990 3.46e-04
chr5_31300746_31300986 1.14e-04
chr5_35276197_35276446 3.73e-06
chr5_38627994_38628169 9.48e-07
chr5_44557215_44557418 9.48e-07
chr5_66525904_66526097 1.51e-05
chr5_73187338_73187612 1.04e-05
chr5_73447836_73448049 1.68e-05
chr5_89220634_89220900 1.83e-06
chr5_100357089_100357312 1.26e-04
chr5_100669991_100670247 3.73e-06
chr5_100774230_100774424 2.34e-04
chr5_104468712_104468892 5.77e-06
chr5_111269691_111269915 1.51e-05
chr5_112961356_112961593 6.78e-06
chr5_114833321_114833580 3.05e-05
chr5_115068947_115069196 9.48e-07
chr5_115081391_115081625 1.14e-04
chr5_115615441_115615590 1.68e-05
chr5_115726080_115726304 3.46e-04
chr5_117563438_117563625 9.48e-07
chr5_118274631_118274833 5.77e-06
chr5_118391640_118391880 9.26e-05
chr5_119154284_119154476 2.13e-04
chr5_120197072_120197323 9.48e-07
chr5_121442111_121442334 2.59e-04
chr5_121830860_121831072 4.69e-05
chr5_122216505_122216717 9.26e-05
chr5_122712184_122712469 1.93e-04
chr5_122884673_122884800 1.32e-05
chr5_123344044_123344309 4.30e-05
chr5_125512634_125512849 1.06e-03
chr5_125892360_125892656 9.48e-07
chr5_126444460_126444693 1.32e-05
chr5_129565053_129565317 1.83e-06
chr5_130291497_130291647 2.13e-04
chr5_135440644_135440808 1.87e-05
chr5_136379828_136380106 8.36e-05
chr5_138729181_138729414 1.87e-05
chr5_141259634_141259885 2.87e-04
chr5_142626848_142627049 1.83e-06
chr5_143616680_143616861 4.30e-05
chr5_144046513_144046699 7.55e-05
chr5_144121808_144121997 5.77e-06
chr5_145802544_145802836 1.26e-04
chr5_147932783_147933045 9.48e-07
chr5_148139335_148139538 9.48e-07
chr5_148772484_148772650 1.04e-04
chr5_149182327_149182562 1.32e-05
chr5_149191245_149191845 9.48e-07
chr5_149690903_149691063 3.61e-05
chr5_149883225_149883374 6.86e-05
chr5_150977609_150977770 5.43e-05
chr5_151235657_151235826 6.78e-06
chr6_13363874_13364104 4.30e-05
chr6_22396787_22397030 3.05e-05
chr6_35729844_35730026 5.77e-06
chr6_38875854_38876104 9.48e-07
chr6_40186879_40187152 3.73e-06
chr6_53984511_53984810 1.06e-03
chr6_54203237_54203455 1.87e-05
chr6_67103191_67103360 2.71e-05
chr6_73155077_73155272 3.73e-06
chr6_82705408_82705635 1.04e-05
chr6_86049083_86049302 1.83e-06
chr6_87491888_87492231 5.77e-06
chr6_90575697_90575888 1.93e-04
chr6_91079175_91079331 7.55e-05
chr6_97054283_97054570 1.83e-06
chr6_97100303_97100475 2.14e-05
chr6_99250671_99250886 3.24e-05
chr6_99477545_99477740 1.14e-04
chr6_108391385_108391554 6.78e-06
chr6_108664504_108664634 1.04e-05
chr6_114356714_114356929 3.73e-06
chr6_115496352_115496679 3.73e-06
chr6_115702790_115703002 4.30e-05
chr6_116148318_116148490 2.14e-05
chr6_117902448_117902644 3.73e-06
chr6_120251231_120251536 9.26e-05
chr6_120407146_120407377 9.26e-05
chr6_121067235_121067436 4.13e-04
chr6_124296715_124296940 1.83e-06
chr6_128049984_128050161 1.32e-05
chr6_140465808_140466032 1.04e-05
chr6_142807518_142807792 9.26e-05
chr6_144219960_144220148 9.48e-07
chr6_145604341_145604449 1.83e-06
chr6_145790786_145791048 9.48e-07
chr6_146247328_146247543 3.73e-06
chr6_148776779_148776920 2.13e-04
chr7_13577662_13577876 2.34e-04
chr7_18686233_18686417 5.43e-05
chr7_25148312_25148485 1.93e-04
chr7_25406299_25406510 6.78e-06
chr7_25754879_25755098 2.34e-04
chr7_29040568_29040790 1.83e-06
chr7_29776754_29776869 1.83e-06
chr7_29800108_29800345 9.26e-05
chr7_29822308_29822591 5.77e-06
chr7_31532624_31532843 1.83e-06
chr7_35007483_35007685 1.04e-05
chr7_35611436_35611552 2.24e-05
chr7_36711900_36712104 2.42e-05
chr7_38927219_38927492 1.87e-05
chr7_38932561_38932831 1.68e-05
chr7_51532701_51532974 1.04e-05
chr7_52293384_52293690 4.95e-04
chr7_52641534_52641736 1.26e-04
chr7_53716060_53716244 9.26e-05
chr7_73200368_73200483 5.39e-04
chr7_82698612_82698810 1.04e-04
chr7_82890940_82891177 4.30e-05
chr7_93360002_93360236 1.26e-04
chr7_108261972_108262219 1.93e-04
chr7_108938649_108938854 5.77e-06
chr7_112405322_112405500 4.13e-04
chr7_120849517_120849725 9.48e-07
chr7_125457402_125457629 3.73e-06
chr7_127834328_127834473 8.36e-05
chr7_128232339_128232560 9.48e-07
chr7_129444853_129445008 3.16e-04
chr7_130163035_130163240 9.48e-07
chr7_130476486_130476840 3.61e-05
chr7_133720552_133720751 1.67e-04
chr7_134218736_134218925 8.36e-05
chr7_134221320_134221529 9.48e-07
chr7_140074125_140074379 2.87e-04
chr7_140950466_140950659 9.48e-07
chr7_141016391_141016544 5.77e-06
chr7_141048093_141048329 3.79e-04
chr7_143334624_143334797 7.55e-05
chr7_148770478_148770655 8.36e-05
chr7_150798260_150798440 2.59e-04
chr8_3439638_3439840 6.40e-04
chr8_3464365_3464593 1.57e-04
chr8_11355203_11355367 2.42e-05
chr8_11430738_11431031 1.83e-06
chr8_13169606_13169832 9.48e-07
chr8_13467148_13467326 5.39e-04
chr8_19588846_19589041 5.77e-06
chr8_23998187_23998379 2.24e-05
chr8_24279474_24279757 1.42e-04
chr8_25351116_25351331 1.04e-05
chr8_26359894_26359996 2.13e-04
chr8_26776690_26776898 1.04e-05
chr8_26853366_26853676 7.55e-05
chr8_37164951_37165138 1.51e-05
chr8_44418955_44419169 4.13e-04
chr8_46429003_46429167 5.43e-05
chr8_58999958_59000172 3.61e-05
chr8_73812411_73812672 1.42e-04
chr8_74001479_74001832 1.35e-03
chr8_75192955_75193148 4.30e-05
chr8_79964579_79964696 1.04e-04
chr8_82174425_82174624 3.73e-06
chr8_97473055_97473227 2.71e-05
chr8_108462256_108462501 5.77e-06
chr8_119706791_119706929 1.57e-04
chr8_120170024_120170237 3.16e-04
chr8_122170233_122170363 1.87e-05
chr8_122887418_122887693 1.04e-05
chr8_122908775_122908990 1.32e-05
chr8_124275380_124275613 1.83e-06
chr8_126324843_126325077 1.51e-05
chr8_127504856_127505062 1.57e-04
chr8_129033204_129033415 2.71e-05
chr8_129337604_129337810 1.83e-06
chr8_129429357_129429649 3.73e-06
chr9_14650940_14651208 1.04e-05
chr9_26983838_26984142 7.55e-05
chr9_31896554_31896787 2.34e-04
chr9_32369997_32370245 1.93e-04
chr9_44156716_44156941 4.95e-04
chr9_54779686_54779905 2.13e-04
chr9_56262243_56262437 6.86e-05
chr9_57116426_57116627 4.95e-04
chr9_57506898_57507098 9.48e-07
chr9_57535995_57536194 2.34e-04
chr9_57857513_57857735 1.04e-04
chr9_59330273_59330512 4.30e-05
chr9_60596972_60597219 3.05e-05
chr9_63179166_63179389 2.59e-04
chr9_63458113_63458335 3.73e-06
chr9_63697494_63697737 6.78e-06
chr9_67650082_67650321 3.73e-06
chr9_69155029_69155228 4.69e-05
chr9_70050676_70050888 3.61e-05
chr9_70976727_70977001 1.04e-04
chr9_71377820_71378024 6.78e-06
chr9_71942574_71942774 1.26e-04
chr9_103205078_103205244 1.83e-06
chr9_104121425_104121617 1.26e-04
chr9_108220008_108220207 3.73e-06
chr9_108987508_108987811 9.26e-05
chr9_112696137_112696339 5.43e-05
chr9_114298538_114298788 9.26e-05
chr9_115968346_115968637 1.83e-06
chr9_119715762_119715899 6.86e-05
chr9_120286863_120287257 2.13e-04
chr9_121193629_121193923 5.84e-05
chr9_121211719_121211985 1.32e-05
chr9_121383968_121384257 1.51e-05
 
0
5
10
15
20

Time 488.1 secs.

Motif 2

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Summary

Sequence Logo

E-value 2.4e-158
Width 10
Sites 139
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
StandardReverse Complement

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GATGGTTGTG

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
chr9_78167380_78167552 11 9.48e-07 TCCCTTTACA GATGGTTGTG
chr8_129459866_129460133 11 9.48e-07 TCTCCTTACA GATGGTTGTG
chr8_107891143_107891332 11 9.48e-07 TCTCCTTATA GATGGTTGTG
chr7_138073985_138074191 11 9.48e-07 TCCCACTACA GATGGTTGTG
chr7_134372207_134372792 11 9.48e-07 TCCCATTACA GATGGTTGTG
chr7_86538160_86538416 11 9.48e-07 TCCTCCTATA GATGGTTGTG
chr7_34980756_34981024 10 9.48e-07 CTCAGTATA GATGGTTGTG A
chr7_20297918_20298084 11 9.48e-07 TCTCATTACG GATGGTTGTG
chr6_134947104_134947292 11 9.48e-07 TCTCATAATA GATGGTTGTG
chr6_8228440_8228689 11 9.48e-07 TCCTCTTATA GATGGTTGTG
chr5_120654307_120654533 11 9.48e-07 TCTCATTACA GATGGTTGTG
chr5_115933502_115933721 8 9.48e-07 CATCAGA GATGGTTGTG AGA
chr5_115054060_115054349 11 9.48e-07 TACCATTACA GATGGTTGTG
chr5_37141667_37141857 11 9.48e-07 TCCCATTACT GATGGTTGTG
chr4_126669649_126669872 11 9.48e-07 TTTCATTCTA GATGGTTGTG
chr4_115918672_115918859 11 9.48e-07 TCTCATTACG GATGGTTGTG
chr3_102951843_102951954 11 9.48e-07 TCGAATTATA GATGGTTGTG
chr3_95114806_95115332 11 9.48e-07 TCCCATTACA GATGGTTGTG
chr3_75683291_75683540 11 9.48e-07 TCCCATTGAA GATGGTTGTG
chr2_173273065_173273252 11 9.48e-07 TCCCAGTGGA GATGGTTGTG
chr2_166889746_166889910 11 9.48e-07 CCCCATTATA GATGGTTGTG
chr2_155977441_155977546 11 9.48e-07 TCCCATTTCA GATGGTTGTG
chr2_152443247_152443444 11 9.48e-07 TCACACTATA GATGGTTGTG
chr19_43742037_43742246 10 9.48e-07 CTCAGTCCA GATGGTTGTG A
chr18_73922676_73922797 11 9.48e-07 GCTCATTACG GATGGTTGTG
chr18_61133385_61133540 11 9.48e-07 TCTCATTATA GATGGTTGTG
chr17_29450396_29450544 11 9.48e-07 TTTCCTTACA GATGGTTGTG
chr17_26406027_26406163 11 9.48e-07 TCCCATTACA GATGGTTGTG
chr17_23992247_23992465 10 9.48e-07 TTCATTACA GATGGTTGTG A
chr15_98732060_98732248 11 9.48e-07 TCATATTACA GATGGTTGTG
chr15_78970102_78970249 11 9.48e-07 TCCCATTACA GATGGTTGTG
chr15_74805704_74805988 11 9.48e-07 TCTCATTATG GATGGTTGTG
chr13_95840388_95840515 11 9.48e-07 TCACCTTACT GATGGTTGTG
chr13_54677605_54677778 11 9.48e-07 TCCCCCTATA GATGGTTGTG
chr13_49142925_49143119 11 9.48e-07 CCTCATTATA GATGGTTGTG
chr12_73872282_73872476 11 9.48e-07 TCTCATTGCA GATGGTTGTG
chr11_116689337_116689594 11 9.48e-07 TTTCGTTACG GATGGTTGTG
chr11_95972398_95972526 11 9.48e-07 CCTCAGTACA GATGGTTGTG
chr11_69620041_69620193 10 9.48e-07 TCCCTTATG GATGGTTGTG A
chr10_126769195_126769519 11 9.48e-07 TCCCCTTATA GATGGTTGTG
chr10_120329962_120330144 10 9.48e-07 CCTCATTAC GATGGTTGTG A
chr10_102570838_102570991 11 9.48e-07 TTCCATTACT GATGGTTGTG
chr10_95014426_95014679 11 9.48e-07 TCCCCTTATA GATGGTTGTG
chr10_90670071_90670312 11 9.48e-07 TGTCATTAAA GATGGTTGTG
chr9_54478855_54478982 11 2.85e-06 TCTCACTATA GATGGTTATG
chr9_14458572_14458721 11 2.85e-06 CCTCATTACA GGTGGTTGTG
chr7_29685078_29685309 11 2.85e-06 TCTCATTACA GATGGTTATG
chr5_144897123_144897287 11 2.85e-06 TCCAGTTACA GGTGGTTGTG
chr5_135596787_135596898 11 2.85e-06 TCCCCTTATA GGTGGTTGTG
chr2_164249379_164249567 11 2.85e-06 CCCCATTACT GATGGTTATG
chr2_26853081_26853363 11 2.85e-06 TCCCAGTATT GATGGTTATG
chr18_84853084_84853344 11 2.85e-06 TCATATTACA GATGGTTATG
chr14_55644540_55644697 11 2.85e-06 TCTCATTACA GGTGGTTGTG
chr13_69523789_69524004 11 2.85e-06 TTACACTATA GATGGTTATG
chr11_69443467_69443666 11 2.85e-06 TCACACTATA GATGGTTATG
chr8_107815861_107815994 11 3.73e-06 TCCCATTACA GATGGCTGTG
chr6_134404052_134404373 11 3.73e-06 TCTCATTATA GATGGCTGTG
chr5_115923300_115923472 11 3.73e-06 TCTCATTACA GATGGCTGTG
chr5_30439154_30439332 11 3.73e-06 CCCCATTTCA GATGGCTGTG
chr2_167170370_167170594 11 3.73e-06 TCCCATTACA GATGGCTGTG
chr18_89215854_89216038 3 3.73e-06 AG GATGGCTGTG CTAATGTG
chr9_13696526_13696705 4 4.68e-06 TTG GAAGGTTGTG GAACCGT
chr8_26145160_26145345 11 4.68e-06 TCCCATTACA GAAGGTTGTG
chr3_120864608_120864944 4 4.68e-06 TTG GAAGGTTGTG GAACTTT
chr17_25267136_25267303 11 5.69e-06 TGTCATTACA GATGGTTGTA
chr8_121992907_121993072 11 6.71e-06 CCCCATTATA GATGATTGTG
chr7_98605702_98606089 10 6.71e-06 AGCTGAGCT GATGATTGTG C
chr7_31336671_31336760 11 6.71e-06 CCACATTACA GATGATTGTG
chr5_136394537_136394733 7 6.71e-06 TTTGCT GATGATTGTG ATTG
chr15_81866488_81866656 11 6.71e-06 TCTCATTACA GATGATTGTG
chr15_77588374_77588498 11 6.71e-06 TCCCATTACA GATGATTGTG
chr12_105980575_105980830 11 6.71e-06 TCCCATTACA GATGATTGTG
chr5_77631431_77631571 11 7.73e-06 TCCTGTCACA AATGGTTGTG
chr9_123434384_123434507 11 8.75e-06 TCCCCTTATG GATGGTTTTG
chr11_77534987_77535227 11 8.75e-06 TCTCATTATA GATGGTTTTG
chr9_66003473_66003605 11 1.16e-05 GTTCATTACA GATAGTTGTG
chr4_86354823_86355014 1 1.16e-05 GTTGGTTGTG CGCCACCATG
chr18_35702295_35702493 11 1.16e-05 TCTCATTACA GTTGGTTGTG
chr11_87875860_87876049 11 1.16e-05 TCCCGGCATA GATGGTCGTG
chr10_62788228_62788425 5 1.16e-05 TACA GATAGTTGTG AGCCAC
chr9_96118322_96118584 11 1.34e-05 TCTCATTATA GGTGGTTATG
chr5_66729875_66730215 9 1.34e-05 GGTGATTA GAGGGTTGTG GT
chr4_102180453_102180632 11 1.34e-05 TCCTGTTACA GAGGGTTGTG
chr9_20802857_20803008 11 1.52e-05 TCTCATTATA GATGGCTATG
chr9_4442954_4443228 11 1.52e-05 TCTTATTATA GATGGCTATG
chr4_148023546_148023689 11 1.52e-05 TCTCACTATA GATGGCTATG
chr2_31028151_31028307 11 1.52e-05 TCTCATTAGA GGTGGCTGTG
chr19_46636672_46636940 11 1.52e-05 TCCCATTCTA GGTGGCTGTG
chr13_6553037_6553208 11 1.52e-05 TCCTACTACA GATGGCTATG
chr1_163144655_163144953 11 1.52e-05 TCACATCATA GGTGGCTGTG
chr5_143188426_143188651 5 1.81e-05 TTGA GGAGGTTGTG GAACCT
chr3_36498789_36498996 11 1.81e-05 ACTCACTGTA GATGTTTGTG
chr18_83025833_83026135 4 1.81e-05 CCG GGAGGTTGTG ACACCGG
chr14_121370583_121370916 10 1.99e-05 TCCTTTATA GACGGTTGTG G
chr14_70356849_70357068 4 1.99e-05 TTG GAAGGCTGTG GAACCCT
chr12_52923379_52923482 11 2.08e-05 TCCCATGAGA GATGGTGGTG
chr11_107871925_107872071 11 2.08e-05 TCGCTTTATA GATGGTGGTG
chr19_44513732_44514098 11 2.37e-05 TCTCATTGCA GATGGTTGAG
chr15_100168400_100168519 11 2.37e-05 CCTCATTACA GGTGGTTGTA
chr11_45773658_45773854 11 2.37e-05 TCTCATTATG GGTGGTTGTA
chr9_65729704_65729893 11 2.67e-05 TCCTATTATA GATGGCTGTA
chr2_11593892_11594105 5 2.67e-05 AACA GGTGATTGTG AGCTGT
chr13_120177751_120177891 11 2.67e-05 TCCCACTATA GATGATTATG
chr3_97738140_97738263 11 2.97e-05 TCTCATTACA AATGGTTATG
chr19_60619302_60619492 11 2.97e-05 TCTCATTATA AATGGTTATG
chr15_100938744_100939017 11 2.97e-05 TCTCATTGTA AGTGGTTGTG
chr15_83129310_83129516 11 3.16e-05 TCCCATTACA GGTGGTTTTG
chr10_57840645_57840833 11 3.16e-05 CCCCATTATA AATGGCTGTG
chr1_79611053_79611349 1 3.16e-05 GGTGGTTTTG GAGCATTTGA
chr6_72314010_72314298 11 3.53e-05 TCCCATTTCT GATGGGTGTG
chr4_59555975_59556147 11 3.53e-05 TCACATTATA GCTGGTTGTG
chr11_6426671_6426938 11 3.53e-05 TCCCATTACA GATGGTTCTG
chr8_131041692_131041966 3 4.11e-05 TG GAAGGTTGTA GACTCCGA
chr16_22594153_22594259 11 4.11e-05 TCCTGTTATA GATAGTTATG
chr14_56717870_56718167 11 4.11e-05 TCATATTATA GATGGTCATG
chr11_84732976_84733118 11 4.11e-05 TCTCTTTATA GATGGTCATG
chr11_24040020_24040170 4 4.11e-05 TTG GAAGGTTGTA AGGACTT
chr10_76527562_76527759 11 4.11e-05 TCTCATTATA GGTAGTTGTG
chr1_187093136_187093275 11 4.11e-05 TCTTATTACA GTTGGTTATG
chr7_137690713_137691137 1 4.95e-05 GTTGGCTGTG TCTGTGCCTC
chr7_29758192_29758382 4 4.95e-05 TCT CATGGTTGTG AGCCACC
chr7_3568584_3568770 11 4.95e-05 TCCCATTGCA GATGGTTGTC
chr19_34995806_34996034 11 4.95e-05 TCACTTTACA GATGGTTGTT
chr1_58734472_58734744 11 4.95e-05 TCTCATTATA GAGGGTTATG
chr6_108294027_108294250 6 5.22e-05 CTTCA GAGGGCTGTG CAAAT
chr3_151229772_151229931 10 5.22e-05 GCATCGTCT AAAGGTTGTG T
chr8_87145131_87145354 4 5.72e-05 TGG GTAGGTTGTG GAACTTT
chr15_98902575_98902690 11 5.72e-05 CACTAGGAGA GAAAGTTGTG
chr6_83109581_83109695 10 6.12e-05 TCTCATATA GATGTTTATG A
chr1_34900352_34900516 1 6.12e-05 GATGTTTATG AACCATTCTG
chr16_93781458_93781699 7 6.79e-05 GTTTGG GGAGGCTGTG GCAT
chr11_19956347_19956538 10 6.79e-05 CCCAGTAGA GGCGGTTGTG G
chr1_64756566_64756751 11 6.79e-05 TCCCAGTATA GATGGTTTTA
chr3_115640280_115640439 11 7.66e-05 CCCCTTTATA GATAGTTGTA
chr15_76116014_76116199 11 7.66e-05 TCCCCCTATA GATGGTCGTA
chr13_55828071_55828227 11 7.66e-05 TCTTATGACA AATGGTTTTG
chr10_50973331_50973522 11 8.35e-05 TCTCATCATA GATGGTTAAG
chr8_107787542_107787697 11 9.23e-05 TCCCATTACA AATGGTCGTG
chr1_108447268_108447499 4 1.21e-04 TTG GGAGGTTGTA GAACCTT

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
chr1_34900352_34900516 6.12e-05
chr1_58734472_58734744 4.95e-05
chr1_64756566_64756751 6.79e-05
chr1_79611053_79611349 3.16e-05
chr1_108447268_108447499 1.21e-04
chr1_163144655_163144953 1.52e-05
chr1_187093136_187093275 4.11e-05
chr10_50973331_50973522 8.35e-05
chr10_57840645_57840833 3.16e-05
chr10_62788228_62788425 1.16e-05
chr10_76527562_76527759 4.11e-05
chr10_90670071_90670312 9.48e-07
chr10_95014426_95014679 9.48e-07
chr10_102570838_102570991 9.48e-07
chr10_120329962_120330144 9.48e-07
chr10_126769195_126769519 9.48e-07
chr11_6426671_6426938 3.53e-05
chr11_19956347_19956538 6.79e-05
chr11_24040020_24040170 4.11e-05
chr11_45773658_45773854 2.37e-05
chr11_69443467_69443666 2.85e-06
chr11_69620041_69620193 9.48e-07
chr11_77534987_77535227 8.75e-06
chr11_84732976_84733118 4.11e-05
chr11_87875860_87876049 1.16e-05
chr11_95972398_95972526 9.48e-07
chr11_107871925_107872071 2.08e-05
chr11_116689337_116689594 9.48e-07
chr12_52923379_52923482 2.08e-05
chr12_73872282_73872476 9.48e-07
chr12_105980575_105980830 6.71e-06
chr13_6553037_6553208 1.52e-05
chr13_49142925_49143119 9.48e-07
chr13_54677605_54677778 9.48e-07
chr13_55828071_55828227 7.66e-05
chr13_69523789_69524004 2.85e-06
chr13_95840388_95840515 9.48e-07
chr13_120177751_120177891 2.67e-05
chr14_55644540_55644697 2.85e-06
chr14_56717870_56718167 4.11e-05
chr14_70356849_70357068 1.99e-05
chr14_121370583_121370916 1.99e-05
chr15_74805704_74805988 9.48e-07
chr15_76116014_76116199 7.66e-05
chr15_77588374_77588498 6.71e-06
chr15_78970102_78970249 9.48e-07
chr15_81866488_81866656 6.71e-06
chr15_83129310_83129516 3.16e-05
chr15_98732060_98732248 9.48e-07
chr15_98902575_98902690 5.72e-05
chr15_100168400_100168519 2.37e-05
chr15_100938744_100939017 2.97e-05
chr16_22594153_22594259 4.11e-05
chr16_93781458_93781699 6.79e-05
chr17_23992247_23992465 9.48e-07
chr17_25267136_25267303 5.69e-06
chr17_26406027_26406163 9.48e-07
chr17_29450396_29450544 9.48e-07
chr18_35702295_35702493 1.16e-05
chr18_61133385_61133540 9.48e-07
chr18_73922676_73922797 9.48e-07
chr18_83025833_83026135 1.81e-05
chr18_84853084_84853344 2.85e-06
chr18_89215854_89216038 3.73e-06
chr19_34995806_34996034 4.95e-05
chr19_43742037_43742246 9.48e-07
chr19_44513732_44514098 2.37e-05
chr19_46636672_46636940 1.52e-05
chr19_60619302_60619492 2.97e-05
chr2_11593892_11594105 2.67e-05
chr2_26853081_26853363 2.85e-06
chr2_31028151_31028307 1.52e-05
chr2_152443247_152443444 9.48e-07
chr2_155977441_155977546 9.48e-07
chr2_164249379_164249567 2.85e-06
chr2_166889746_166889910 9.48e-07
chr2_167170370_167170594 3.73e-06
chr2_173273065_173273252 9.48e-07
chr3_36498789_36498996 1.81e-05
chr3_75683291_75683540 9.48e-07
chr3_95114806_95115332 9.48e-07
chr3_97738140_97738263 2.97e-05
chr3_102951843_102951954 9.48e-07
chr3_115640280_115640439 7.66e-05
chr3_120864608_120864944 4.68e-06
chr3_151229772_151229931 5.22e-05
chr4_59555975_59556147 3.53e-05
chr4_86354823_86355014 1.16e-05
chr4_102180453_102180632 1.34e-05
chr4_115918672_115918859 9.48e-07
chr4_126669649_126669872 9.48e-07
chr4_148023546_148023689 1.52e-05
chr5_30439154_30439332 3.73e-06
chr5_37141667_37141857 9.48e-07
chr5_66729875_66730215 1.34e-05
chr5_77631431_77631571 7.73e-06
chr5_115054060_115054349 9.48e-07
chr5_115923300_115923472 3.73e-06
chr5_115933502_115933721 9.48e-07
chr5_120654307_120654533 9.48e-07
chr5_135596787_135596898 2.85e-06
chr5_136394537_136394733 6.71e-06
chr5_143188426_143188651 1.81e-05
chr5_144897123_144897287 2.85e-06
chr6_8228440_8228689 9.48e-07
chr6_72314010_72314298 3.53e-05
chr6_83109581_83109695 6.12e-05
chr6_108294027_108294250 5.22e-05
chr6_134404052_134404373 3.73e-06
chr6_134947104_134947292 9.48e-07
chr7_3568584_3568770 4.95e-05
chr7_20297918_20298084 9.48e-07
chr7_29685078_29685309 2.85e-06
chr7_29758192_29758382 4.95e-05
chr7_31336671_31336760 6.71e-06
chr7_34980756_34981024 9.48e-07
chr7_86538160_86538416 9.48e-07
chr7_98605702_98606089 6.71e-06
chr7_134372207_134372792 9.48e-07
chr7_137690713_137691137 4.95e-05
chr7_138073985_138074191 9.48e-07
chr8_26145160_26145345 4.68e-06
chr8_87145131_87145354 5.72e-05
chr8_107787542_107787697 9.23e-05
chr8_107815861_107815994 3.73e-06
chr8_107891143_107891332 9.48e-07
chr8_121992907_121993072 6.71e-06
chr8_129459866_129460133 9.48e-07
chr8_131041692_131041966 4.11e-05
chr9_4442954_4443228 1.52e-05
chr9_13696526_13696705 4.68e-06
chr9_14458572_14458721 2.85e-06
chr9_20802857_20803008 1.52e-05
chr9_54478855_54478982 2.85e-06
chr9_65729704_65729893 2.67e-05
chr9_66003473_66003605 1.16e-05
chr9_78167380_78167552 9.48e-07
chr9_96118322_96118584 1.34e-05
chr9_123434384_123434507 8.75e-06
 
0
5
10
15
20

Time 532 secs.

Motif 3

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Summary

Sequence Logo

E-value 1.4e-115
Width 7
Sites 140
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
StandardReverse Complement

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

TCCCCTG

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
chr9_123682479_123682738 1 5.45e-05 TCCCCTG GCTTTGGAAT
chr9_104121425_104121617 1 5.45e-05 TCCCCTG CAACTGGAAT
chr9_66459581_66459915 14 5.45e-05 AGACGCCGAG TCCCCTG
chr9_64160055_64160259 1 5.45e-05 TCCCCTG GAACTACAGG
chr9_63458113_63458335 1 5.45e-05 TCCCCTG AAACTGGAGT
chr9_57857513_57857735 1 5.45e-05 TCCCCTG GGACTGGAGA
chr9_56262243_56262437 1 5.45e-05 TCCCCTG GAACTAGAGC
chr9_54779686_54779905 1 5.45e-05 TCCCCTG GCACTAGAGT
chr8_126324843_126325077 1 5.45e-05 TCCCCTG GAATTGGAGT
chr8_122908775_122908990 1 5.45e-05 TCCCCTG GACCTGGAGT
chr8_122170233_122170363 1 5.45e-05 TCCCCTG GATCTGGAGT
chr8_119002617_119002843 1 5.45e-05 TCCCCTG TAGTTGATGG
chr8_74001479_74001832 1 5.45e-05 TCCCCTG GAACGGAAGT
chr8_13467148_13467326 1 5.45e-05 TCCCCTG GAACCGGTGT
chr7_148770478_148770655 1 5.45e-05 TCCCCTG GACCTAGAGT
chr7_127834328_127834473 2 5.45e-05 T TCCCCTG AAGCTGGAGC
chr7_125457402_125457629 1 5.45e-05 TCCCCTG GGACTGGAGT
chr7_120849517_120849725 1 5.45e-05 TCCCCTG GAACTGGAGT
chr7_108999108_108999394 14 5.45e-05 GTTTGGAGTC TCCCCTG
chr7_52641534_52641736 1 5.45e-05 TCCCCTG GATCTGGAAT
chr7_38927219_38927492 1 5.45e-05 TCCCCTG CAACTGGAGT
chr7_30847548_30847777 2 5.45e-05 T TCCCCTG GAGTTAGAGG
chr7_29800108_29800345 1 5.45e-05 TCCCCTG GAGCTGAAAT
chr7_25821008_25821234 1 5.45e-05 TCCCCTG CCATCGAAAT
chr6_145790786_145791048 1 5.45e-05 TCCCCTG GAACTGGAGT
chr6_137704945_137705126 1 5.45e-05 TCCCCTG GGATTGGATT
chr6_134571227_134571409 1 5.45e-05 TCCCCTG ACCCTGCTAC
chr6_120407146_120407377 1 5.45e-05 TCCCCTG GAATTAGAGT
chr6_115702790_115703002 1 5.45e-05 TCCCCTG GGACTAGAGT
chr6_115643068_115643170 1 5.45e-05 TCCCCTG TAACTGCCAG
chr6_112509683_112509863 1 5.45e-05 TCCCCTG GAGCCAACTG
chr6_99250671_99250886 1 5.45e-05 TCCCCTG AGACTGGAGT
chr6_92134389_92134585 1 5.45e-05 TCCCCTG AAATTGACCT
chr6_91079175_91079331 1 5.45e-05 TCCCCTG AAATTGGAGT
chr6_83462550_83462802 1 5.45e-05 TCCCCTG GGACCTGAGT
chr6_50890197_50890435 1 5.45e-05 TCCCCTG CAGCTAAAGC
chr5_149690903_149691063 1 5.45e-05 TCCCCTG GAAATGGAGT
chr5_149494209_149494413 1 5.45e-05 TCCCCTG GGGCTGAGTT
chr5_148772484_148772650 1 5.45e-05 TCCCCTG AAACTGGAGA
chr5_147932783_147933045 1 5.45e-05 TCCCCTG GAACTGGAGT
chr5_144121808_144121997 2 5.45e-05 C TCCCCTG GAACTAGAGT
chr5_142626848_142627049 1 5.45e-05 TCCCCTG GAGCTGGAGT
chr5_141208257_141208512 10 5.45e-05 AATTTTGTT TCCCCTG GAGC
chr5_140812681_140812960 1 5.45e-05 TCCCCTG GACCTGTGTT
chr5_122712184_122712469 1 5.45e-05 TCCCCTG GAGCCAGAGT
chr5_121830860_121831072 1 5.45e-05 TCCCCTG GAACTGGATT
chr5_118274631_118274833 1 5.45e-05 TCCCCTG GAACTGAAGT
chr5_104468712_104468892 1 5.45e-05 TCCCCTG GAACTAGAGT
chr5_101248639_101248843 1 5.45e-05 TCCCCTG GAACTTAATG
chr5_93591770_93591973 1 5.45e-05 TCCCCTG GTGGTGGGAT
chr5_38627994_38628169 1 5.45e-05 TCCCCTG GAACTGGAGT
chr4_150282658_150282889 1 5.45e-05 TCCCCTG GACCTGGAGA
chr4_148788501_148788680 1 5.45e-05 TCCCCTG AAATGAAATG
chr4_135708859_135709088 1 5.45e-05 TCCCCTG GAACTGGAGT
chr4_128536155_128536397 1 5.45e-05 TCCCCTG AAGCTGGCGT
chr4_126829738_126829956 1 5.45e-05 TCCCCTG AGGTGGATTT
chr4_126731931_126732148 1 5.45e-05 TCCCCTG GAACAAGAAT
chr4_125834887_125835107 2 5.45e-05 A TCCCCTG CTACTGTAGT
chr4_124013119_124013275 1 5.45e-05 TCCCCTG GGAACTGGAG
chr4_123636514_123636762 12 5.45e-05 AGGCAGGTAC TCCCCTG CC
chr4_119132967_119133198 1 5.45e-05 TCCCCTG GAGTTACAAG
chr4_105766005_105766173 1 5.45e-05 TCCCCTG GGACTAGAGT
chr4_47265625_47265784 1 5.45e-05 TCCCCTG GAGTAAGAAC
chr4_43498653_43498825 1 5.45e-05 TCCCCTG GAACTGGGTT
chr4_35257987_35258175 1 5.45e-05 TCCCCTG GAACTGGAGG
chr4_3710702_3710882 1 5.45e-05 TCCCCTG AGATTGGAGT
chr3_97103889_97104182 1 5.45e-05 TCCCCTG GACCTGGAGT
chr3_96617149_96617351 1 5.45e-05 TCCCCTG GAACTGGAGT
chr3_94615687_94615860 1 5.45e-05 TCCCCTG GAGCTGAAGG
chr3_89621069_89621387 1 5.45e-05 TCCCCTG GAGCTGGAGT
chr3_53133563_53133757 1 5.45e-05 TCCCCTG AAAGTGGAGT
chr2_172053372_172053565 1 5.45e-05 TCCCCTG GAGTTACAGG
chr2_166830076_166830390 1 5.45e-05 TCCCCTG AAACTCAAGT
chr2_165819987_165820194 1 5.45e-05 TCCCCTG GAACTGGAGC
chr2_156112568_156112757 1 5.45e-05 TCCCCTG AGACTGGAGT
chr2_155777809_155778015 1 5.45e-05 TCCCCTG GAGAAGTAGT
chr2_152983078_152983333 1 5.45e-05 TCCCCTG GAACTGCAGT
chr2_127137054_127137253 1 5.45e-05 TCCCCTG TGACTAGACT
chr2_69469622_69469834 2 5.45e-05 T TCCCCTG GAACTAGAGT
chr2_38953643_38953843 1 5.45e-05 TCCCCTG AAGATGAGTT
chr2_30314833_30315060 1 5.45e-05 TCCCCTG GAACTGGAGT
chr2_30155137_30155319 1 5.45e-05 TCCCCTG GAACTGGGAT
chr19_56082013_56082228 1 5.45e-05 TCCCCTG GATCTGGAGC
chr19_46357062_46357248 1 5.45e-05 TCCCCTG GGACTGCGGG
chr19_6684072_6684299 1 5.45e-05 TCCCCTG GAACTGCAGT
chr19_5428181_5428349 1 5.45e-05 TCCCCTG GAACTGGAGT
chr19_4908177_4908412 1 5.45e-05 TCCCCTG GGGCTGGAAT
chr18_80366724_80366981 1 5.45e-05 TCCCCTG GAACTGGACT
chr17_57358683_57359076 1 5.45e-05 TCCCCTG GAGCTGCAGG
chr17_48230494_48230670 1 5.45e-05 TCCCCTG GAACTGGACT
chr17_48038904_48039064 1 5.45e-05 TCCCCTG AGACTGGAGT
chr17_35028454_35028639 1 5.45e-05 TCCCCTG GAGCTGAAGT
chr17_24444498_24444829 1 5.45e-05 TCCCCTG AGCCAGGGTG
chr16_92455842_92455981 2 5.45e-05 T TCCCCTG TGTTCTCCAT
chr16_89941070_89941226 1 5.45e-05 TCCCCTG GAGCTGGCGT
chr16_29785327_29785472 1 5.45e-05 TCCCCTG GAACTGGAGT
chr16_22354397_22354622 1 5.45e-05 TCCCCTG GAGCTAGAGC
chr15_91131820_91132130 1 5.45e-05 TCCCCTG AAACTGGAGT
chr15_84756161_84756358 1 5.45e-05 TCCCCTG TAACTCCCAA
chr15_81592512_81592731 1 5.45e-05 TCCCCTG GAGCTGGAGT
chr15_79492374_79492639 1 5.45e-05 TCCCCTG GGACAGTAGC
chr15_78678966_78679328 10 5.45e-05 TACCCATGG TCCCCTG GTGA
chr15_75923267_75923448 1 5.45e-05 TCCCCTG GAAGTGGAGT
chr14_10226029_10226278 1 5.45e-05 TCCCCTG CGTTCCAGAC
chr13_95020812_95020982 1 5.45e-05 TCCCCTG GGAGTTTGTT
chr13_63609235_63609447 1 5.45e-05 TCCCCTG GAGCGTGAGG
chr13_55859060_55859301 1 5.45e-05 TCCCCTG GGACTCAAGC
chr13_55494320_55494652 1 5.45e-05 TCCCCTG GAACTGGAGT
chr13_51825111_51825494 2 5.45e-05 T TCCCCTG GAACTGAAGT
chr13_51379489_51379715 1 5.45e-05 TCCCCTG CAGATGGATT
chr12_100089087_100089311 1 5.45e-05 TCCCCTG CCAGTAAGTG
chr12_81300790_81300985 1 5.45e-05 TCCCCTG GAACTGGAAT
chr12_33965653_33966007 2 5.45e-05 T TCCCCTG GAACTGGAGT
chr12_17563603_17563911 1 5.45e-05 TCCCCTG CAAGTGAGTG
chr11_114775825_114776003 1 5.45e-05 TCCCCTG GGACTGGAGT
chr11_113273929_113274176 2 5.45e-05 T TCCCCTG GGGCAGGATA
chr11_109302527_109302799 1 5.45e-05 TCCCCTG GAACTGGAGT
chr11_88999328_88999503 1 5.45e-05 TCCCCTG AATTTAGAGC
chr11_86311484_86311721 2 5.45e-05 C TCCCCTG GAACTGGAGA
chr11_58000518_58000682 1 5.45e-05 TCCCCTG CAGCTGTAGT
chr11_51379533_51379787 2 5.45e-05 T TCCCCTG GAGCTGGAGT
chr11_31594203_31594447 1 5.45e-05 TCCCCTG GAACCTGAGT
chr10_122427737_122427943 1 5.45e-05 TCCCCTG GAACTGGAGT
chr10_93924270_93924435 1 5.45e-05 TCCCCTG GTACTAGACT
chr10_93070887_93071091 2 5.45e-05 G TCCCCTG GCTTGTGTCC
chr10_67969095_67969224 2 5.45e-05 G TCCCCTG GAGCTGAGTA
chr10_66888263_66888415 1 5.45e-05 TCCCCTG TAGTTGGAGT
chr10_42662251_42662373 3 5.45e-05 TT TCCCCTG GCGCTAACAT
chr10_38784622_38784838 1 5.45e-05 TCCCCTG GAGCTCCTTA
chr10_5175839_5176051 1 5.45e-05 TCCCCTG AGACTAGGGT
chr1_95724311_95724494 7 5.45e-05 GTCGGA TCCCCTG GAGCTTC
chr1_37523509_37523772 1 5.45e-05 TCCCCTG GAATTGGAGT
chr1_33580935_33581128 2 5.45e-05 A TCCCCTG GGCCTGAGGC
chr1_12925977_12926156 1 5.45e-05 TCCCCTG GGCTAGAAAT
chr19_60662606_60662881 13 1.05e-04 GAGGTAAAAC GCCCCTG T
chr10_61573663_61573985 12 1.05e-04 GCCGGGCCTC GCCCCTG CG
chr5_136282462_136282830 2 1.60e-04 A TCCGCTG TCTCCGAGTT
chr2_168298298_168298803 12 1.60e-04 AGCCCCCACA TCCGCTG CC
chr6_108722915_108723231 2 2.61e-04 C GCCGCTG TGCAGGCTGG
chr12_12427601_12428043 13 3.09e-04 ACTGAGCAGC GCCCCGG C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
chr1_12925977_12926156 5.45e-05
chr1_33580935_33581128 5.45e-05
chr1_37523509_37523772 5.45e-05
chr1_95724311_95724494 5.45e-05
chr10_5175839_5176051 5.45e-05
chr10_38784622_38784838 5.45e-05
chr10_42662251_42662373 5.45e-05
chr10_61573663_61573985 1.05e-04
chr10_66888263_66888415 5.45e-05
chr10_67969095_67969224 5.45e-05
chr10_93070887_93071091 5.45e-05
chr10_93924270_93924435 5.45e-05
chr10_122427737_122427943 5.45e-05
chr11_31594203_31594447 5.45e-05
chr11_51379533_51379787 5.45e-05
chr11_58000518_58000682 5.45e-05
chr11_86311484_86311721 5.45e-05
chr11_88999328_88999503 5.45e-05
chr11_109302527_109302799 5.45e-05
chr11_113273929_113274176 5.45e-05
chr11_114775825_114776003 5.45e-05
chr12_12427601_12428043 3.09e-04
chr12_17563603_17563911 5.45e-05
chr12_33965653_33966007 5.45e-05
chr12_81300790_81300985 5.45e-05
chr12_100089087_100089311 5.45e-05
chr13_51379489_51379715 5.45e-05
chr13_51825111_51825494 5.45e-05
chr13_55494320_55494652 5.45e-05
chr13_55859060_55859301 5.45e-05
chr13_63609235_63609447 5.45e-05
chr13_95020812_95020982 5.45e-05
chr14_10226029_10226278 5.45e-05
chr15_75923267_75923448 5.45e-05
chr15_78678966_78679328 5.45e-05
chr15_79492374_79492639 5.45e-05
chr15_81592512_81592731 5.45e-05
chr15_84756161_84756358 5.45e-05
chr15_91131820_91132130 5.45e-05
chr16_22354397_22354622 5.45e-05
chr16_29785327_29785472 5.45e-05
chr16_89941070_89941226 5.45e-05
chr16_92455842_92455981 5.45e-05
chr17_24444498_24444829 5.45e-05
chr17_35028454_35028639 5.45e-05
chr17_48038904_48039064 5.45e-05
chr17_48230494_48230670 5.45e-05
chr17_57358683_57359076 5.45e-05
chr18_80366724_80366981 5.45e-05
chr19_4908177_4908412 5.45e-05
chr19_5428181_5428349 5.45e-05
chr19_6684072_6684299 5.45e-05
chr19_46357062_46357248 5.45e-05
chr19_56082013_56082228 5.45e-05
chr19_60662606_60662881 1.05e-04
chr2_30155137_30155319 5.45e-05
chr2_30314833_30315060 5.45e-05
chr2_38953643_38953843 5.45e-05
chr2_69469622_69469834 5.45e-05
chr2_127137054_127137253 5.45e-05
chr2_152983078_152983333 5.45e-05
chr2_155777809_155778015 5.45e-05
chr2_156112568_156112757 5.45e-05
chr2_165819987_165820194 5.45e-05
chr2_166830076_166830390 5.45e-05
chr2_168298298_168298803 1.60e-04
chr2_172053372_172053565 5.45e-05
chr3_53133563_53133757 5.45e-05
chr3_89621069_89621387 5.45e-05
chr3_94615687_94615860 5.45e-05
chr3_96617149_96617351 5.45e-05
chr3_97103889_97104182 5.45e-05
chr4_3710702_3710882 5.45e-05
chr4_35257987_35258175 5.45e-05
chr4_43498653_43498825 5.45e-05
chr4_47265625_47265784 5.45e-05
chr4_105766005_105766173 5.45e-05
chr4_119132967_119133198 5.45e-05
chr4_123636514_123636762 5.45e-05
chr4_124013119_124013275 5.45e-05
chr4_125834887_125835107 5.45e-05
chr4_126731931_126732148 5.45e-05
chr4_126829738_126829956 5.45e-05
chr4_128536155_128536397 5.45e-05
chr4_135708859_135709088 5.45e-05
chr4_148788501_148788680 5.45e-05
chr4_150282658_150282889 5.45e-05
chr5_38627994_38628169 5.45e-05
chr5_93591770_93591973 5.45e-05
chr5_101248639_101248843 5.45e-05
chr5_104468712_104468892 5.45e-05
chr5_118274631_118274833 5.45e-05
chr5_121830860_121831072 5.45e-05
chr5_122712184_122712469 5.45e-05
chr5_136282462_136282830 1.60e-04
chr5_140812681_140812960 5.45e-05
chr5_141208257_141208512 5.45e-05
chr5_142626848_142627049 5.45e-05
chr5_144121808_144121997 5.45e-05
chr5_147932783_147933045 5.45e-05
chr5_148772484_148772650 5.45e-05
chr5_149494209_149494413 5.45e-05
chr5_149690903_149691063 5.45e-05
chr6_50890197_50890435 5.45e-05
chr6_83462550_83462802 5.45e-05
chr6_91079175_91079331 5.45e-05
chr6_92134389_92134585 5.45e-05
chr6_99250671_99250886 5.45e-05
chr6_108722915_108723231 2.61e-04
chr6_112509683_112509863 5.45e-05
chr6_115643068_115643170 5.45e-05
chr6_115702790_115703002 5.45e-05
chr6_120407146_120407377 5.45e-05
chr6_134571227_134571409 5.45e-05
chr6_137704945_137705126 5.45e-05
chr6_145790786_145791048 5.45e-05
chr7_25821008_25821234 5.45e-05
chr7_29800108_29800345 5.45e-05
chr7_30847548_30847777 5.45e-05
chr7_38927219_38927492 5.45e-05
chr7_52641534_52641736 5.45e-05
chr7_108999108_108999394 5.45e-05
chr7_120849517_120849725 5.45e-05
chr7_125457402_125457629 5.45e-05
chr7_127834328_127834473 5.45e-05
chr7_148770478_148770655 5.45e-05
chr8_13467148_13467326 5.45e-05
chr8_74001479_74001832 5.45e-05
chr8_119002617_119002843 5.45e-05
chr8_122170233_122170363 5.45e-05
chr8_122908775_122908990 5.45e-05
chr8_126324843_126325077 5.45e-05
chr9_54779686_54779905 5.45e-05
chr9_56262243_56262437 5.45e-05
chr9_57857513_57857735 5.45e-05
chr9_63458113_63458335 5.45e-05
chr9_64160055_64160259 5.45e-05
chr9_66459581_66459915 5.45e-05
chr9_104121425_104121617 5.45e-05
chr9_123682479_123682738 5.45e-05
 
0
5
10
15
20

Time 575.8 secs.

Motif 4

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Summary

Sequence Logo

E-value 1.1e-075
Width 10
Sites 112
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
StandardReverse Complement

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

TC[CT]CATTA[CT]A

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
chr8_107815861_107815994 1 1.02e-06 TCCCATTACA GATGGCTGTG
chr8_107787542_107787697 1 1.02e-06 TCCCATTACA AATGGTCGTG
chr8_26145160_26145345 1 1.02e-06 TCCCATTACA GAAGGTTGTG
chr7_134372207_134372792 1 1.02e-06 TCCCATTACA GATGGTTGTG
chr3_95114806_95115332 1 1.02e-06 TCCCATTACA GATGGTTGTG
chr3_87990473_87990670 1 1.02e-06 TCCCATTACA GACTGGTTGT
chr2_167170370_167170594 1 1.02e-06 TCCCATTACA GATGGCTGTG
chr17_26406027_26406163 1 1.02e-06 TCCCATTACA GATGGTTGTG
chr16_44743015_44743167 1 1.02e-06 TCCCATTACA CATATTTGTG
chr15_83129310_83129516 1 1.02e-06 TCCCATTACA GGTGGTTTTG
chr15_78970102_78970249 1 1.02e-06 TCCCATTACA GATGGTTGTG
chr15_77588374_77588498 1 1.02e-06 TCCCATTACA GATGATTGTG
chr12_105980575_105980830 1 1.02e-06 TCCCATTACA GATGATTGTG
chr11_6426671_6426938 1 1.02e-06 TCCCATTACA GATGGTTCTG
chr10_127060546_127060708 1 1.02e-06 TCCCATTACA GATGGTCTCC
chr9_22035060_22035271 1 3.21e-06 TCCCATTATA GAAGCCACCA
chr7_52846395_52846564 1 3.21e-06 TCCCATTATA GACGTCTGTG
chr7_52429263_52429505 1 3.21e-06 TCTCATTACA GATCATGAGC
chr7_29685078_29685309 1 3.21e-06 TCTCATTACA GATGGTTATG
chr7_4747657_4747996 1 3.21e-06 TCCCATTATA GATGGTGTGA
chr5_120654307_120654533 1 3.21e-06 TCTCATTACA GATGGTTGTG
chr5_115923300_115923472 1 3.21e-06 TCTCATTACA GATGGCTGTG
chr3_97738140_97738263 1 3.21e-06 TCTCATTACA AATGGTTATG
chr18_35702295_35702493 1 3.21e-06 TCTCATTACA GTTGGTTGTG
chr16_62852795_62853043 1 3.21e-06 TCTCATTACA GACAGTTGTG
chr15_81866488_81866656 1 3.21e-06 TCTCATTACA GATGATTGTG
chr15_79943043_79943252 1 3.21e-06 TCCCATTATA CATGGTTGCG
chr14_55644540_55644697 1 3.21e-06 TCTCATTACA GGTGGTTGTG
chr9_96118322_96118584 1 4.38e-06 TCTCATTATA GGTGGTTATG
chr9_20802857_20803008 1 4.38e-06 TCTCATTATA GATGGCTATG
chr6_134404052_134404373 1 4.38e-06 TCTCATTATA GATGGCTGTG
chr19_60619302_60619492 1 4.38e-06 TCTCATTATA AATGGTTATG
chr19_44273581_44273776 1 4.38e-06 TCTCATTATA GGGAGCTGTG
chr18_61133385_61133540 1 4.38e-06 TCTCATTATA GATGGTTGTG
chr11_77534987_77535227 1 4.38e-06 TCTCATTATA GATGGTTTTG
chr10_76527562_76527759 1 4.38e-06 TCTCATTATA GGTAGTTGTG
chr1_152914006_152914163 1 4.38e-06 TCTCATTATA GGTGGCTGCG
chr1_58734472_58734744 1 4.38e-06 TCTCATTATA GAGGGTTATG
chr4_59555975_59556147 1 6.65e-06 TCACATTATA GCTGGTTGTG
chr7_138073985_138074191 1 7.60e-06 TCCCACTACA GATGGTTGTG
chr11_119876171_119876364 10 7.60e-06 AGCCACCCC TCCCACTACA G
chr13_120177751_120177891 1 9.64e-06 TCCCACTATA GATGATTATG
chr9_54478855_54478982 1 1.17e-05 TCTCACTATA GATGGTTATG
chr7_52323145_52323667 1 1.17e-05 TCTCACTATA GACAGATGGT
chr5_89118688_89118794 1 1.17e-05 TCCCCTTACA GATGGTAATG
chr4_148023546_148023689 1 1.17e-05 TCTCACTATA GATGGCTATG
chr8_129459866_129460133 1 1.37e-05 TCTCCTTACA GATGGTTGTG
chr5_135596787_135596898 1 1.37e-05 TCCCCTTATA GGTGGTTGTG
chr10_126769195_126769519 1 1.37e-05 TCCCCTTATA GATGGTTGTG
chr10_95014426_95014679 1 1.37e-05 TCCCCTTATA GATGGTTGTG
chr8_107891143_107891332 1 1.48e-05 TCTCCTTATA GATGGTTGTG
chr10_62042705_62042905 3 1.58e-05 TC CCCCATTACA GATGGTTG
chr9_78167380_78167552 1 1.99e-05 TCCCTTTACA GATGGTTGTG
chr9_14458572_14458721 1 1.99e-05 CCTCATTACA GGTGGTTGTG
chr8_121992907_121993072 1 1.99e-05 CCCCATTATA GATGATTGTG
chr2_166889746_166889910 1 1.99e-05 CCCCATTATA GATGGTTGTG
chr15_100168400_100168519 1 1.99e-05 CCTCATTACA GGTGGTTGTA
chr10_57840645_57840833 1 1.99e-05 CCCCATTATA AATGGCTGTG
chr9_65729704_65729893 1 2.55e-05 TCCTATTATA GATGGCTGTA
chr3_59548182_59548335 11 2.55e-05 TCCCATCTGA TCTCTTTACA
chr16_56131865_56132146 1 2.55e-05 TCCCTTTATA AATGGTGAGG
chr13_49142925_49143119 1 2.55e-05 CCTCATTATA GATGGTTGTG
chr11_29609590_29609807 1 2.55e-05 TCCCTTTATA GATGGCCTTA
chr11_20116538_20116677 1 2.55e-05 TCCTATTATA AAATGGTTGT
chr10_75692427_75692621 1 2.55e-05 TCCCTTTATA GATGATCATG
chr1_187093136_187093275 1 2.55e-05 TCTTATTACA GTTGGTTATG
chr9_4442954_4443228 1 2.99e-05 TCTTATTATA GATGGCTATG
chr7_3568584_3568770 1 2.99e-05 TCCCATTGCA GATGGTTGTC
chr11_84732976_84733118 1 2.99e-05 TCTCTTTATA GATGGTCATG
chr7_20297918_20298084 1 3.49e-05 TCTCATTACG GATGGTTGTG
chr4_115918672_115918859 1 3.49e-05 TCTCATTACG GATGGTTGTG
chr19_44513732_44514098 1 3.49e-05 TCTCATTGCA GATGGTTGAG
chr17_47743275_47743420 1 3.49e-05 TCTCATTACG GGTGGGTGTG
chr16_32890065_32890209 1 3.49e-05 TCCCAGTACA GTGATGGCTG
chr12_104610032_104610340 11 3.49e-05 TCTGCAAATA TCCCATTGTA
chr12_73872282_73872476 1 3.49e-05 TCTCATTGCA GATGGTTGTG
chr19_5376778_5376983 1 3.91e-05 TCCCAGTATA GATGATCGTT
chr15_100938744_100939017 1 3.91e-05 TCTCATTGTA AGTGGTTGTG
chr15_74805704_74805988 1 3.91e-05 TCTCATTATG GATGGTTGTG
chr14_61945929_61946138 1 3.91e-05 TCTCATTATG AGTAGTTGTG
chr11_45773658_45773854 1 3.91e-05 TCTCATTATG GGTGGTTGTA
chr1_64756566_64756751 1 3.91e-05 TCCCAGTATA GATGGTTTTA
chr5_124749375_124749623 1 4.02e-05 TCTCAGTATA GGTGGCGATC
chr7_13605583_13605762 1 4.12e-05 TCCCATCACA GATGCCTGTG
chr10_50973331_50973522 1 4.53e-05 TCTCATCATA GATGGTTAAG
chr1_64590405_64590581 1 4.53e-05 TCTCATCATA GAGGTTGTGG
chr2_152443247_152443444 1 4.64e-05 TCACACTATA GATGGTTGTG
chr12_16915184_16915323 1 4.64e-05 TCACACTATA GTCATGAGCA
chr11_69443467_69443666 1 4.64e-05 TCACACTATA GATGGTTATG
chr16_22953254_22953438 1 5.15e-05 TCTCGTTACA AATAGTTAGG
chr5_37141667_37141857 1 5.46e-05 TCCCATTACT GATGGTTGTG
chr2_34695821_34695940 1 5.46e-05 TCTCGTTATA GGTAGCCATG
chr9_116309471_116309708 11 6.41e-05 CTGTGCTCCT TCTCATTACT
chr7_31336671_31336760 1 6.41e-05 CCACATTACA GATGATTGTG
chr7_30646778_30646924 3 6.41e-05 GC TTCCATTACA GGCAGGTG
chr5_115054060_115054349 1 6.41e-05 TACCATTACA GATGGTTGTG
chr2_152504139_152504465 1 6.41e-05 TTCCATTACA TGGATTCACA
chr17_25267136_25267303 1 6.41e-05 TGTCATTACA GATGGTTGTA
chr7_134395895_134396319 1 7.75e-05 TGTCATTATA GATGGTATGA
chr2_154999107_154999218 10 7.75e-05 TACATCAGA TATCATTACA G
chr2_31028151_31028307 1 7.75e-05 TCTCATTAGA GGTGGCTGTG
chr19_34995806_34996034 1 7.75e-05 TCACTTTACA GATGGTTGTT
chr18_84853084_84853344 1 7.75e-05 TCATATTACA GATGGTTATG
chr15_98732060_98732248 1 7.75e-05 TCATATTACA GATGGTTGTG
chr15_76116014_76116199 1 7.75e-05 TCCCCCTATA GATGGTCGTA
chr13_54677605_54677778 1 7.75e-05 TCCCCCTATA GATGGTTGTG
chr14_56717870_56718167 1 8.35e-05 TCATATTATA GATGGTCATG
chr2_84710527_84710746 3 8.64e-05 AG TCACATTGCA GTGTAAGG
chr13_6553037_6553208 1 9.35e-05 TCCTACTACA GATGGCTATG
chr6_8228440_8228689 1 1.15e-04 TCCTCTTATA GATGGTTGTG
chr8_124365305_124365564 1 1.28e-04 TCCCCGTACA GAAGTTACAG
chr1_163144655_163144953 1 1.28e-04 TCACATCATA GGTGGCTGTG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
chr1_58734472_58734744 4.38e-06
chr1_64590405_64590581 4.53e-05
chr1_64756566_64756751 3.91e-05
chr1_152914006_152914163 4.38e-06
chr1_163144655_163144953 1.28e-04
chr1_187093136_187093275 2.55e-05
chr10_50973331_50973522 4.53e-05
chr10_57840645_57840833 1.99e-05
chr10_62042705_62042905 1.58e-05
chr10_75692427_75692621 2.55e-05
chr10_76527562_76527759 4.38e-06
chr10_95014426_95014679 1.37e-05
chr10_126769195_126769519 1.37e-05
chr10_127060546_127060708 1.02e-06
chr11_6426671_6426938 1.02e-06
chr11_20116538_20116677 2.55e-05
chr11_29609590_29609807 2.55e-05
chr11_45773658_45773854 3.91e-05
chr11_69443467_69443666 4.64e-05
chr11_77534987_77535227 4.38e-06
chr11_84732976_84733118 2.99e-05
chr11_119876171_119876364 7.60e-06
chr12_16915184_16915323 4.64e-05
chr12_73872282_73872476 3.49e-05
chr12_104610032_104610340 3.49e-05
chr12_105980575_105980830 1.02e-06
chr13_6553037_6553208 9.35e-05
chr13_49142925_49143119 2.55e-05
chr13_54677605_54677778 7.75e-05
chr13_120177751_120177891 9.64e-06
chr14_55644540_55644697 3.21e-06
chr14_56717870_56718167 8.35e-05
chr14_61945929_61946138 3.91e-05
chr15_74805704_74805988 3.91e-05
chr15_76116014_76116199 7.75e-05
chr15_77588374_77588498 1.02e-06
chr15_78970102_78970249 1.02e-06
chr15_79943043_79943252 3.21e-06
chr15_81866488_81866656 3.21e-06
chr15_83129310_83129516 1.02e-06
chr15_98732060_98732248 7.75e-05
chr15_100168400_100168519 1.99e-05
chr15_100938744_100939017 3.91e-05
chr16_22953254_22953438 5.15e-05
chr16_32890065_32890209 3.49e-05
chr16_44743015_44743167 1.02e-06
chr16_56131865_56132146 2.55e-05
chr16_62852795_62853043 3.21e-06
chr17_25267136_25267303 6.41e-05
chr17_26406027_26406163 1.02e-06
chr17_47743275_47743420 3.49e-05
chr18_35702295_35702493 3.21e-06
chr18_61133385_61133540 4.38e-06
chr18_84853084_84853344 7.75e-05
chr19_5376778_5376983 3.91e-05
chr19_34995806_34996034 7.75e-05
chr19_44273581_44273776 4.38e-06
chr19_44513732_44514098 3.49e-05
chr19_60619302_60619492 4.38e-06
chr2_31028151_31028307 7.75e-05
chr2_34695821_34695940 5.46e-05
chr2_84710527_84710746 8.64e-05
chr2_152443247_152443444 4.64e-05
chr2_152504139_152504465 6.41e-05
chr2_154999107_154999218 7.75e-05
chr2_166889746_166889910 1.99e-05
chr2_167170370_167170594 1.02e-06
chr3_59548182_59548335 2.55e-05
chr3_87990473_87990670 1.02e-06
chr3_95114806_95115332 1.02e-06
chr3_97738140_97738263 3.21e-06
chr4_59555975_59556147 6.65e-06
chr4_115918672_115918859 3.49e-05
chr4_148023546_148023689 1.17e-05
chr5_37141667_37141857 5.46e-05
chr5_89118688_89118794 1.17e-05
chr5_115054060_115054349 6.41e-05
chr5_115923300_115923472 3.21e-06
chr5_120654307_120654533 3.21e-06
chr5_124749375_124749623 4.02e-05
chr5_135596787_135596898 1.37e-05
chr6_8228440_8228689 1.15e-04
chr6_134404052_134404373 4.38e-06
chr7_3568584_3568770 2.99e-05
chr7_4747657_4747996 3.21e-06
chr7_13605583_13605762 4.12e-05
chr7_20297918_20298084 3.49e-05
chr7_29685078_29685309 3.21e-06
chr7_30646778_30646924 6.41e-05
chr7_31336671_31336760 6.41e-05
chr7_52323145_52323667 1.17e-05
chr7_52429263_52429505 3.21e-06
chr7_52846395_52846564 3.21e-06
chr7_134372207_134372792 1.02e-06
chr7_134395895_134396319 7.75e-05
chr7_138073985_138074191 7.60e-06
chr8_26145160_26145345 1.02e-06
chr8_107787542_107787697 1.02e-06
chr8_107815861_107815994 1.02e-06
chr8_107891143_107891332 1.48e-05
chr8_121992907_121993072 1.99e-05
chr8_124365305_124365564 1.28e-04
chr8_129459866_129460133 1.37e-05
chr9_4442954_4443228 2.99e-05
chr9_14458572_14458721 1.99e-05
chr9_20802857_20803008 4.38e-06
chr9_22035060_22035271 3.21e-06
chr9_54478855_54478982 1.17e-05
chr9_65729704_65729893 2.55e-05
chr9_78167380_78167552 1.99e-05
chr9_96118322_96118584 4.38e-06
chr9_116309471_116309708 6.41e-05
 
0
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Time 620.7 secs.

Motif 5

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Summary

Sequence Logo

E-value 6.7e+059
Width 10
Sites 100
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
StandardReverse Complement

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[GC][GC][CG][CGA]G[CG][CGT][GC]CG

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
chr7_127978983_127979540 2 3.97e-06 G CGCCGCCGCG TCCTCCAGG
chr2_119114009_119114613 8 6.00e-06 GGAGACT CGGCGCGGCG GGG
chr3_132972834_132973697 5 8.74e-06 GAGC GGCCGCGCCG GGCCCA
chr17_50431909_50432385 4 8.74e-06 GCT GGCCGCGCCG GGTCCTG
chr4_133805601_133805908 8 1.47e-05 AGCAGCA GGCGGCGGCG TCC
chr2_169956012_169956179 11 1.47e-05 CATCCGAGGG CGCCGCCCCG
chr2_121239322_121239494 1 1.81e-05 GGCCGCTCCG GCTTCGCTGA
chr17_48233692_48234349 6 1.81e-05 CCCCA GGCCGCTCCG AACTC
chr2_155517982_155518344 11 2.28e-05 TGGCAGCTAC CGCGGCGGCG
chr5_92392037_92392408 2 2.90e-05 C GGCGGCTGCG CGCGCAGGT
chr3_143864860_143865139 11 2.90e-05 CGTCACCGGG GGCGGCTGCG
chr2_31509959_31510172 8 2.90e-05 CGGCGGC GGCAGCGGCG GCG
chr16_17806913_17807285 9 2.90e-05 GGTGCAGC GGCAGCGGCG CT
chr8_72856113_72856206 5 4.20e-05 TCCT CGGCGCTCCG CTCTGT
chr19_44758692_44759059 1 4.20e-05 GGGCGGCGCG AGCCTCAGTC
chr9_123387408_123387742 1 4.81e-05 CCCCGCCCCG CTCCCGCCCC
chr2_30214792_30215077 11 4.81e-05 CTCCCCAAAG CCCCGCCCCG
chr15_98823422_98823792 2 4.81e-05 C CCGCGCTGCG GCCACCGCC
chr2_131012549_131012829 1 5.49e-05 GGGGGCGCCG GTTCCGGGAG
chr8_74556937_74557068 11 6.66e-05 CCTCCTTGTG CGCAGCTGCG
chr8_19331912_19332153 11 6.66e-05 CATCCTTGTG CGCAGCTGCG
chr5_149187138_149187419 6 6.66e-05 CCTCG GGCAGCGCCG GCATC
chr3_10249555_10249778 11 6.66e-05 CCTCATTGTG CGCAGCTGCG
chr16_90350073_90350248 11 6.66e-05 CCTCATTGTG CGCAGCTGCG
chr11_101286256_101286497 6 6.66e-05 GACGT GCGGGCGGCG TTTCC
chr1_94853331_94853420 11 6.66e-05 CCTCTTTGTG CGCAGCTGCG
chr18_74601857_74602196 11 7.42e-05 CGCCGGCTCC CGGGGCGCCG
chr18_38456137_38456577 3 7.42e-05 GA GCCAGCCGCG CTGAGGGC
chr11_82721562_82722133 11 7.42e-05 GCCGGAGGTT GCCCGGCGCG
chr9_37297175_37297353 7 8.79e-05 GGCCGC CGCAGCCCCG CCAC
chr5_121144519_121144802 1 8.79e-05 GGCGGGGGCG GAGGGGGCGC
chr5_113650301_113650616 11 8.79e-05 CACATAGTCT CGCGGCTCCG
chr4_57156379_57156839 8 8.79e-05 AGCCCGG CGCAGCCCCG GGG
chr3_134292873_134293118 5 8.79e-05 AGAT CGCGGCTCCG TGGCAC
chr2_127952768_127953799 7 8.79e-05 CCCGGG CGGAGCTGCG CTCG
chr2_78709196_78709489 1 1.00e-04 CCGCGCTCCG GGAGCCACGG
chr19_36132137_36132375 9 1.00e-04 CCCGGAGC GCGCGGGGCG CT
chr7_126167078_126167500 2 1.10e-04 G GGACGCTGCG AAGGGCAGG
chr11_101999806_102000089 5 1.24e-04 GACT CGCAGCTCCG TCCGAG
chr1_10029545_10029890 1 1.24e-04 GGCCGCGCGG CCTCCGCCAG
chr16_3908641_3909220 7 1.35e-04 CACCTT GCGAGCTGCG CAAC
chr13_34169818_34170238 1 1.35e-04 GCGCGGTGCG AGGTGCGGGG
chr7_7230770_7230989 4 1.51e-04 GAT CGGCGCTGGG CCCTAGA
chr16_33251548_33251714 9 1.69e-04 GCTGTGCT GGAGGCCGCG GT
chr7_150293130_150293321 11 1.86e-04 TGCTCCGCCT GGGGGCGGGG
chr5_151476095_151476434 4 1.86e-04 AAC CCACGCGGCG CTCTGCC
chr2_168590478_168590773 11 2.09e-04 ACGCCAGAGG CCGGGCTCCG
chr2_158187057_158187733 6 2.09e-04 GGGCC CGCCGCTCGG AGATG
chr12_45310592_45310966 5 2.09e-04 CGCC GGCAGGGCCG GAGCAT
chr7_86955877_86956299 8 2.29e-04 GGCGGCA GGAAGCGGCG CAG
chr19_36484070_36484350 2 2.29e-04 C GGGCTCCGCG GGGCCACTC
chr15_35256354_35256734 11 2.56e-04 GGGACGAATT CGCAGCCGGG
chr12_103707201_103707444 9 2.56e-04 TGGCGCTA GGGCCCCGCG GC
chr5_115140790_115141230 9 2.81e-04 CGCTCGCT GCGAGGCGCG GG
chr11_95375830_95376067 1 2.81e-04 CGACGGGGCG GGAGGGGCCG
chr11_78249497_78249846 6 2.81e-04 CTGAG CCGCGCTGGG GCGTG
chr19_6915042_6915253 1 3.07e-04 GCCCGCTCGG CCCCAGAGGC
chr16_4586583_4586923 8 3.07e-04 TAGCCTC GGGCGTCCCG CCC
chr11_58784594_58784767 4 3.39e-04 CTC GGGCGGTGGG CTCAAGT
chr5_140144546_140144895 5 4.10e-04 TGCG CGTCGCTGCG TCTGGT
chr4_25208922_25209070 4 4.10e-04 CTC GGCAGTCGCG TTTCTGT
chr13_42144937_42145249 8 4.10e-04 GGGATCT CCGCGTGGCG GTG
chr8_125202403_125202943 7 4.52e-04 CACCCG CCGCGCTCGG CCTT
chr5_31014814_31015126 2 4.52e-04 G CCGCGCCGCC AGGGGCTGG
chr18_82112883_82113300 11 4.52e-04 GCTCCGAAAT GCGCGGCGGG
chr10_80261615_80261802 1 4.52e-04 GCGAGGCCCG TTGGGTCGCC
chr19_4000471_4000796 4 4.95e-04 TCC CGGAGCCCGG TATGAGA
chr15_76437981_76438247 10 4.95e-04 CGCTCGCAG CCACGGCGCG C
chr14_28409549_28409795 5 4.95e-04 AGCT GCCCGCGCCC TCTCTC
chr13_43576782_43576973 7 4.95e-04 CGAACC CGCGCCCGCG TCCT
chr12_25777127_25777446 4 4.95e-04 CCT CCACGGCGCG ACCAGCT
chr11_101593934_101594354 1 4.95e-04 GGCCTGCGCG ACTGAACAGC
chr5_137943970_137944432 10 5.39e-04 TCATGGCTT GCCGGTCGCG G
chr5_136441604_136441862 9 5.39e-04 CGTCTGGT GGGCGGCGCC AG
chr4_88406441_88406628 2 5.39e-04 G GGCGCCTGCG GAGGCCGTT
chr5_36740651_36740988 11 5.86e-04 CCCTTGGCTG CGTGGCGGCG
chr13_25029365_25029475 1 5.86e-04 GGACGCGCGG CCCAGAAGCT
chr7_7252120_7252435 3 6.38e-04 GA GCACGCCGGG AAAAACCT
chr13_59686946_59687124 1 6.38e-04 CGCCCGGGCG ACACGGGCAC
chr11_105881790_105882033 3 6.38e-04 GC GCGCTCGCCG TCAAGTTC
chr14_47407968_47408267 1 6.92e-04 GCGGGCGGCC CTCTGCGCAA
chr13_54472742_54473242 11 6.92e-04 TGCTCAGCCA GCTCGCGCCG
chr10_80847075_80847284 5 6.92e-04 CAGA GGACGTCGCG CGAGAT
chr19_21346826_21347100 6 7.52e-04 CGGGC CCCGTCGGCG CTCAG
chr6_17644101_17644317 1 8.16e-04 GGGCGCGGGC TTCCTGGAGC
chr11_58807876_58808107 2 8.16e-04 C GGGCGGCCCC TGAAGCAGA
chr10_128360254_128360397 5 8.82e-04 TAGC GGGCGACCCG AGTGCC
chr1_182698603_182698991 2 8.82e-04 G CGCCGCCACG AGGGCTCGA
chr2_152365829_152366056 1 9.56e-04 CCGGGGCGGG AGACATCCCA
chr13_55570633_55570861 1 9.56e-04 GGGCCGGCCG ACATCTGGCC
chr12_84827636_84827868 11 9.56e-04 CGCAAGGACT CGCGGGGGCC
chr12_25785514_25785770 1 9.56e-04 CGCGGGTCGG GCCACCACCA
chr18_61696013_61696273 1 1.03e-03 CGCGTGCGCG GTGAGTCCAG
chr2_35867107_35867362 2 1.10e-03 G GGGGCGCGCG TAGGAGCGC
chr14_21147722_21147928 11 1.66e-03 GCCCAGGTGA GCGCACGGCG
chr11_32062187_32062596 2 1.77e-03 T GCGCGCGCGC ACGGTCGCC
chr15_94420112_94420364 10 1.89e-03 GCACCCTGC GCCGGAGCCG G
chr13_55521963_55522209 4 2.00e-03 ACT GCCCGCGCAG AAGTTGT
chr11_70376223_70376468 1 2.27e-03 CGCGTTCGCG TCACGGTCGG
chr18_36440439_36440591 7 2.87e-03 CTTGCC GCCGTTCGCG AGGC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
chr1_10029545_10029890 1.24e-04
chr1_94853331_94853420 6.66e-05
chr1_182698603_182698991 8.82e-04
chr10_80261615_80261802 4.52e-04
chr10_80847075_80847284 6.92e-04
chr10_128360254_128360397 8.82e-04
chr11_32062187_32062596 1.77e-03
chr11_58784594_58784767 3.39e-04
chr11_58807876_58808107 8.16e-04
chr11_70376223_70376468 2.27e-03
chr11_78249497_78249846 2.81e-04
chr11_82721562_82722133 7.42e-05
chr11_95375830_95376067 2.81e-04
chr11_101286256_101286497 6.66e-05
chr11_101593934_101594354 4.95e-04
chr11_101999806_102000089 1.24e-04
chr11_105881790_105882033 6.38e-04
chr12_25777127_25777446 4.95e-04
chr12_25785514_25785770 9.56e-04
chr12_45310592_45310966 2.09e-04
chr12_84827636_84827868 9.56e-04
chr12_103707201_103707444 2.56e-04
chr13_25029365_25029475 5.86e-04
chr13_34169818_34170238 1.35e-04
chr13_42144937_42145249 4.10e-04
chr13_43576782_43576973 4.95e-04
chr13_54472742_54473242 6.92e-04
chr13_55521963_55522209 2.00e-03
chr13_55570633_55570861 9.56e-04
chr13_59686946_59687124 6.38e-04
chr14_21147722_21147928 1.66e-03
chr14_28409549_28409795 4.95e-04
chr14_47407968_47408267 6.92e-04
chr15_35256354_35256734 2.56e-04
chr15_76437981_76438247 4.95e-04
chr15_94420112_94420364 1.89e-03
chr15_98823422_98823792 4.81e-05
chr16_3908641_3909220 1.35e-04
chr16_4586583_4586923 3.07e-04
chr16_17806913_17807285 2.90e-05
chr16_33251548_33251714 1.69e-04
chr16_90350073_90350248 6.66e-05
chr17_48233692_48234349 1.81e-05
chr17_50431909_50432385 8.74e-06
chr18_36440439_36440591 2.87e-03
chr18_38456137_38456577 7.42e-05
chr18_61696013_61696273 1.03e-03
chr18_74601857_74602196 7.42e-05
chr18_82112883_82113300 4.52e-04
chr19_4000471_4000796 4.95e-04
chr19_6915042_6915253 3.07e-04
chr19_21346826_21347100 7.52e-04
chr19_36132137_36132375 1.00e-04
chr19_36484070_36484350 2.29e-04
chr19_44758692_44759059 4.20e-05
chr2_30214792_30215077 4.81e-05
chr2_31509959_31510172 2.90e-05
chr2_35867107_35867362 1.10e-03
chr2_78709196_78709489 1.00e-04
chr2_119114009_119114613 6.00e-06
chr2_121239322_121239494 1.81e-05
chr2_127952768_127953799 8.79e-05
chr2_131012549_131012829 5.49e-05
chr2_152365829_152366056 9.56e-04
chr2_155517982_155518344 2.28e-05
chr2_158187057_158187733 2.09e-04
chr2_168590478_168590773 2.09e-04
chr2_169956012_169956179 1.47e-05
chr3_10249555_10249778 6.66e-05
chr3_132972834_132973697 8.74e-06
chr3_134292873_134293118 8.79e-05
chr3_143864860_143865139 2.90e-05
chr4_25208922_25209070 4.10e-04
chr4_57156379_57156839 8.79e-05
chr4_88406441_88406628 5.39e-04
chr4_133805601_133805908 1.47e-05
chr5_31014814_31015126 4.52e-04
chr5_36740651_36740988 5.86e-04
chr5_92392037_92392408 2.90e-05
chr5_113650301_113650616 8.79e-05
chr5_115140790_115141230 2.81e-04
chr5_121144519_121144802 8.79e-05
chr5_136441604_136441862 5.39e-04
chr5_137943970_137944432 5.39e-04
chr5_140144546_140144895 4.10e-04
chr5_149187138_149187419 6.66e-05
chr5_151476095_151476434 1.86e-04
chr6_17644101_17644317 8.16e-04
chr7_7230770_7230989 1.51e-04
chr7_7252120_7252435 6.38e-04
chr7_86955877_86956299 2.29e-04
chr7_126167078_126167500 1.10e-04
chr7_127978983_127979540 3.97e-06
chr7_150293130_150293321 1.86e-04
chr8_19331912_19332153 6.66e-05
chr8_72856113_72856206 4.20e-05
chr8_74556937_74557068 6.66e-05
chr8_125202403_125202943 4.52e-04
chr9_37297175_37297353 8.79e-05
chr9_123387408_123387742 4.81e-05
 
0
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20

Time 666.1 secs.

All Motifs

 Top

Combined Block Diagrams

Non-overlapping sites with a p-value better than 0.0001.
The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. The motif blocks have tool tips with more information.

Motif 1
Motif 2
Motif 3
Motif 4
Motif 5
Name Combined p-value Motif Location
chr1_12925977_12926156 4.29e-03
chr1_13141273_13141505 3.26e-03
chr1_33580935_33581128 2.27e-03
chr1_33593571_33593726 1.75e-04
chr1_34900352_34900516 7.85e-02
chr1_37523509_37523772 2.43e-05
chr1_58734472_58734744 7.27e-05
chr1_58859260_58859617 2.10e-02
chr1_64590405_64590581 5.60e-04
chr1_64756566_64756751 2.72e-04
chr1_70833850_70834031 1.16e-03
chr1_79611053_79611349 1.45e-02
chr1_84467037_84467187 6.88e-03
chr1_88049258_88049490 3.66e-03
chr1_88301525_88301724 6.97e-05
chr1_89560632_89560828 4.47e-02
chr1_91909539_91909778 1.39e-02
chr1_94853331_94853420 9.29e-04
chr1_95724311_95724494 8.77e-03
chr1_126571097_126571266 1.05e-02
chr1_135933128_135933351 3.21e-04
chr1_136332077_136332248 1.38e-03
chr1_138636155_138636455 2.21e-04
chr1_139123169_139123390 4.38e-03
chr1_152914006_152914163 4.50e-05
chr1_162720854_162720980 9.10e-05
chr1_163070240_163070442 8.97e-05
chr1_163144655_163144953 1.14e-04
chr1_163320321_163320510 6.50e-03
chr1_169236694_169236941 9.57e-03
chr1_171880878_171881090 6.42e-04
chr1_174092242_174092455 7.60e-02
chr1_180310144_180310312 1.13e-02
chr1_182160770_182161055 1.61e-02
chr1_184396150_184396369 5.81e-04
chr1_186641704_186641927 5.76e-03
chr1_187093136_187093275 2.20e-04
chr1_192736628_192736799 1.84e-03
chr10_5175839_5176051 2.20e-03
chr10_14405579_14405788 1.92e-03
chr10_20015924_20016052 1.31e-04
chr10_20091963_20092149 3.30e-03
chr10_21057082_21057321 4.41e-03
chr10_38784622_38784838 2.88e-03
chr10_42661783_42662072 7.52e-02
chr10_42662251_42662373 3.59e-03
chr10_43155683_43155865 1.33e-03
chr10_50635560_50635722 1.82e-04
chr10_50973331_50973522 7.54e-04
chr10_57840645_57840833 1.40e-04
chr10_58841619_58841797 5.42e-05
chr10_60075686_60075947 1.43e-04
chr10_62042705_62042905 4.92e-03
chr10_62788228_62788425 3.93e-02
chr10_66655205_66655429 7.82e-03
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chr5_104468712_104468892 5.09e-05
chr5_111269691_111269915 2.29e-02
chr5_112961356_112961593 1.40e-03
chr5_113650301_113650616 4.29e-02
chr5_114833321_114833580 4.26e-04
chr5_115054060_115054349 2.18e-05
chr5_115068947_115069196 1.59e-03
chr5_115615441_115615590 1.08e-02
chr5_115923300_115923472 7.06e-06
chr5_115933502_115933721 5.20e-03
chr5_117563438_117563625 2.51e-03
chr5_118274631_118274833 4.94e-05
chr5_118391640_118391880 6.39e-02
chr5_120197072_120197323 7.37e-05
chr5_120654307_120654533 2.31e-06
chr5_121144519_121144802 6.94e-03
chr5_121830860_121831072 1.85e-04
chr5_122216505_122216717 2.89e-03
chr5_122712184_122712469 5.72e-04
chr5_122884673_122884800 4.81e-03
chr5_123344044_123344309 8.73e-04
chr5_124749375_124749623 8.66e-03
chr5_125892360_125892656 8.36e-04
chr5_126444460_126444693 5.03e-03
chr5_129565053_129565317 1.37e-04
chr5_135440644_135440808 8.65e-04
chr5_135596787_135596898 5.86e-07
chr5_136379828_136380106 2.01e-03
chr5_136394537_136394733 1.38e-02
chr5_138729181_138729414 3.53e-03
chr5_140812681_140812960 9.68e-03
chr5_141208257_141208512 2.28e-03
chr5_142626848_142627049 8.53e-06
chr5_143188426_143188651 1.82e-02
chr5_143616680_143616861 6.60e-03
chr5_144046513_144046699 2.23e-02
chr5_144121808_144121997 1.96e-05
chr5_144897123_144897287 5.33e-04
chr5_147932783_147933045 5.96e-06
chr5_148139335_148139538 1.54e-03
chr5_148772484_148772650 5.39e-04
chr5_149182327_149182562 6.35e-04
chr5_149187138_149187419 8.98e-03
chr5_149191245_149191845 4.76e-04
chr5_149494209_149494413 8.89e-04
chr5_149690903_149691063 5.15e-05
chr5_149883225_149883374 6.83e-02
chr5_150977609_150977770 7.36e-03
chr5_151235657_151235826 5.99e-03
chr6_8228440_8228689 1.68e-05
chr6_13363874_13364104 4.74e-03
chr6_22396787_22397030 1.18e-02
chr6_35729844_35730026 6.18e-04
chr6_38875854_38876104 1.63e-05
chr6_40186879_40187152 4.77e-04
chr6_50890197_50890435 4.99e-03
chr6_54203237_54203455 4.62e-03
chr6_67103191_67103360 1.34e-02
chr6_72314010_72314298 4.15e-03
chr6_73155077_73155272 1.82e-04
chr6_82705408_82705635 1.21e-02
chr6_83109581_83109695 9.26e-02
chr6_83462550_83462802 5.67e-04
chr6_86049083_86049302 1.16e-04
chr6_87491888_87492231 2.91e-04
chr6_91079175_91079331 1.48e-04
chr6_92134389_92134585 1.22e-02
chr6_97054283_97054570 4.36e-04
chr6_97100303_97100475 8.31e-03
chr6_99250671_99250886 9.49e-05
chr6_108294027_108294250 2.17e-02
chr6_108391385_108391554 1.63e-03
chr6_108664504_108664634 3.42e-03
chr6_112509683_112509863 6.01e-03
chr6_114356714_114356929 4.13e-04
chr6_115496352_115496679 2.15e-03
chr6_115643068_115643170 4.02e-02
chr6_115702790_115703002 5.78e-05
chr6_115943692_115944018 1.14e-02
chr6_116148318_116148490 1.50e-03
chr6_117902448_117902644 4.00e-03
chr6_120251231_120251536 1.36e-01
chr6_120407146_120407377 6.90e-04
chr6_124296715_124296940 1.09e-04
chr6_128049984_128050161 1.48e-03
chr6_134404052_134404373 9.34e-06
chr6_134571227_134571409 9.88e-03
chr6_134947104_134947292 5.06e-04
chr6_137704945_137705126 2.29e-03
chr6_140465808_140466032 3.13e-03
chr6_142807518_142807792 2.23e-02
chr6_144219960_144220148 3.78e-06
chr6_145604341_145604449 1.56e-03
chr6_145790786_145791048 6.48e-06
chr6_146247328_146247543 3.72e-03
chr7_3568584_3568770 1.66e-05
chr7_4747657_4747996 3.02e-04
chr7_13605583_13605762 2.35e-03
chr7_18686233_18686417 7.19e-02
chr7_20297918_20298084 1.54e-05
chr7_25406299_25406510 8.00e-04
chr7_25821008_25821234 3.81e-02
chr7_29040568_29040790 7.21e-04
chr7_29685078_29685309 5.98e-06
chr7_29758192_29758382 9.08e-03
chr7_29776754_29776869 2.87e-04
chr7_29800108_29800345 3.46e-04
chr7_29822308_29822591 5.01e-03
chr7_30646778_30646924 6.05e-02
chr7_30847548_30847777 8.39e-04
chr7_31336671_31336760 9.16e-05
chr7_31532624_31532843 1.37e-04
chr7_34980756_34981024 8.04e-03
chr7_35007483_35007685 2.31e-03
chr7_35611436_35611552 3.15e-04
chr7_36711900_36712104 2.67e-02
chr7_38927219_38927492 7.69e-05
chr7_38932561_38932831 1.13e-02
chr7_51532701_51532974 4.53e-03
chr7_52323145_52323667 3.09e-02
chr7_52429263_52429505 1.16e-03
chr7_52641534_52641736 8.62e-04
chr7_52846395_52846564 1.45e-04
chr7_53716060_53716244 2.89e-03
chr7_82890940_82891177 4.05e-03
chr7_86538160_86538416 1.01e-04
chr7_98605702_98606089 1.41e-03
chr7_108938649_108938854 9.86e-04
chr7_108999108_108999394 9.39e-04
chr7_120849517_120849725 6.48e-06
chr7_125457402_125457629 8.19e-06
chr7_127834328_127834473 2.44e-04
chr7_127978983_127979540 1.04e-03
chr7_128232339_128232560 3.11e-05
chr7_130163035_130163240 8.42e-04
chr7_130476486_130476840 8.75e-03
chr7_134218736_134218925 4.00e-03
chr7_134221320_134221529 2.41e-04
chr7_134372207_134372792 1.92e-07
chr7_134395895_134396319 3.08e-02
chr7_137690713_137691137 2.73e-02
chr7_138073985_138074191 1.52e-06
chr7_140950466_140950659 1.26e-04
chr7_141016391_141016544 1.62e-04
chr7_143334624_143334797 9.17e-04
chr7_148770478_148770655 1.28e-04
chr8_11355203_11355367 2.36e-03
chr8_11430738_11431031 1.34e-04
chr8_13169606_13169832 6.15e-03
chr8_13467148_13467326 6.16e-04
chr8_19331912_19332153 2.12e-03
chr8_19588846_19589041 7.42e-04
chr8_23998187_23998379 5.62e-04
chr8_25351116_25351331 4.76e-04
chr8_26145160_26145345 7.37e-07
chr8_26776690_26776898 7.67e-04
chr8_26853366_26853676 2.23e-03
chr8_37164951_37165138 2.48e-03
chr8_46429003_46429167 4.50e-02
chr8_58999958_59000172 1.17e-02
chr8_72856113_72856206 4.45e-03
chr8_74001479_74001832 3.37e-03
chr8_74556937_74557068 9.61e-04
chr8_75192955_75193148 1.46e-02
chr8_82174425_82174624 9.12e-03
chr8_87145131_87145354 7.05e-02
chr8_97473055_97473227 2.10e-02
chr8_107787542_107787697 1.10e-05
chr8_107815861_107815994 6.10e-07
chr8_107891143_107891332 3.14e-06
chr8_108462256_108462501 7.08e-04
chr8_119002617_119002843 1.48e-03
chr8_119451840_119452218 4.64e-02
chr8_121992907_121993072 4.61e-05
chr8_122170233_122170363 2.00e-04
chr8_122887418_122887693 8.52e-04
chr8_122908775_122908990 6.40e-05
chr8_124275380_124275613 4.81e-04
chr8_126324843_126325077 2.43e-05
chr8_129033204_129033415 4.19e-03
chr8_129337604_129337810 6.21e-05
chr8_129429357_129429649 1.26e-03
chr8_129459866_129460133 2.55e-06
chr8_131041692_131041966 2.41e-02
chr9_4442954_4443228 1.75e-04
chr9_13696526_13696705 1.51e-02
chr9_14458572_14458721 1.54e-05
chr9_14650940_14651208 6.50e-03
chr9_20802857_20803008 3.36e-05
chr9_22035060_22035271 4.30e-03
chr9_26983838_26984142 8.21e-02
chr9_37297175_37297353 1.17e-02
chr9_54478855_54478982 1.93e-05
chr9_54779686_54779905 1.07e-04
chr9_56262243_56262437 4.07e-04
chr9_57506898_57507098 3.21e-04
chr9_57857513_57857735 1.13e-04
chr9_59330273_59330512 2.41e-04
chr9_60596972_60597219 2.63e-03
chr9_63458113_63458335 3.97e-05
chr9_63697494_63697737 2.32e-04
chr9_64160055_64160259 2.53e-03
chr9_65729704_65729893 1.93e-04
chr9_66003473_66003605 7.87e-03
chr9_66459581_66459915 1.60e-02
chr9_67650082_67650321 1.58e-03
chr9_69155029_69155228 6.38e-02
chr9_70050676_70050888 4.55e-03
chr9_71377820_71378024 1.19e-03
chr9_78167380_78167552 3.48e-06
chr9_96118322_96118584 2.40e-05
chr9_103205078_103205244 1.57e-03
chr9_104121425_104121617 5.22e-04
chr9_108220008_108220207 9.12e-03
chr9_108987508_108987811 4.11e-02
chr9_112696137_112696339 2.22e-03
chr9_114298538_114298788 8.63e-03
chr9_115968346_115968637 2.41e-04
chr9_116309471_116309708 5.89e-02
chr9_119715762_119715899 2.31e-03
chr9_121193629_121193923 1.12e-02
chr9_121211719_121211985 1.65e-04
chr9_121383968_121384257 1.22e-03
chr9_123387408_123387742 1.71e-02
chr9_123434384_123434507 1.66e-05
chr9_123682479_123682738 1.82e-03
 
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Top
MEME version
4.8.1 (Release date: Tue Feb 7 14:03:40 EST 2012)
Reference
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.
show training set...
Command line summary

Letter frequencies in dataset
A: 0.237   C: 0.265   G: 0.263   T: 0.235

Background letter frequencies (from analysis_manual_v4/meme/background.1):
A: 0.259   C: 0.241   G: 0.241   T: 0.259

Stopping Reason
Stopped because nmotifs = 5 reached. Program ran on p860.
show model parameters...

Explanation of MEME Results

 Top

The MEME results consist of

  • The overview of all discovered motifs.
  • Information on each of the motifs MEME discovered, including:
    1. A summary table showing the width, number of contributing sites, log likelihood ratio, statistical significance, information content and relative entropy of the motif.
    2. A sequence LOGO.
    3. Downloadable LOGO files suitable for publication.
    4. A regular expression describing the motif.
    5. Some further analysis that can be performed on the motif.
    6. A list of data formats describing the motif.
    7. The contributing sites of the motif sorted by p-value and aligned with each other.
    8. The block diagrams of the contributing sites of the motif within each sequence in the training set.
  • A combined block diagram showing an optimized (non-overlapping) tiling of all of the motifs onto each of the sequences in the training set.
  • The version of MEME and the date it was released.
  • The reference to cite if you use MEME in your research.
  • A description of the sequences you submitted (the "training set") showing the name, "weight" and length of each sequence.
  • The command line summary detailing the parameters with which you ran MEME.
  • The reason why MEME stopped and the name of the CPU on which it ran.
  • This explanation of how to interpret MEME results.

Motifs

For each motif that it discovers in the training set, MEME prints the following information:

Summary Table

This summary table gives the main attributes of the motif.

E-value
The statistical significance of the motif. MEME usually finds the most statistically significant (low E-value) motifs first. The E-value of a motif is based on its log likelihood ratio, width, sites, the background letter frequencies (given in the command line summary), and the size of the training set. The E-value is an estimate of the expected number of motifs with the given log likelihood ratio (or higher), and with the same width and site count, that one would find in a similarly sized set of random sequences. (In random sequences each position is independent with letters chosen according to the background letter frequencies.)
Width
The width of the motif. Each motif describes a pattern of a fixed with as no gaps are allowed in MEME motifs.
Sites
The number of sites contributing to the construction of the motif.
Log Likelihood Ratio
The log likelihood ratio of the motif.The log likelihood ratio is the logarithm of the ratio of the probability of the occurrences of the motif given the motif model (likelihood given the motif) versus their probability given the background model (likelihood given the null model). (Normally the background model is a 0-order Markov model using the background letter frequencies, but higher order Markov models may be specified via the -bfile option to MEME.)
Information Content
The information content of the motif in bits. It is equal to the sum of the uncorrected information content, R(), in the columns of the LOGO. This is equal relative entropy of the motif relative to a uniform background frequency model.
Relative Entropy
The relative entropy of the motif, computed in bits and relative to the background letter frequencies given in the command line summary. It is equal to the log-likelihood ratio (llr) divided by the number of contributing sites of the motif times 1/ln(2),

re = llr / (sites * ln(2)).
Sequence LOGO

MEME motifs are represented by position-specific probability matrices that specify the probability of each possible letter appearing at each possible position in an occurrence of the motif. These are displayed as "sequence LOGOS", containing stacks of letters at each position in the motif. The total height of the stack is the "information content" of that position in the motif in bits. The height of the individual letters in a stack is the probability of the letter at that position multiplied by the total information content of the stack.

Note: The MEME LOGO differs from those produced by the Weblogo program because a small-sample correction is NOT applied. However, MEME LOGOs in PNG and encapsulated postscript (EPS) formats with small-sample correction (SSC) are available by clicking on the download button with "SSC" set to "on" under Download LOGO. The MEME LOGOs without small sample correction are similarly available. Error bars are included in the LOGOs with small-sample correction.

Modern web browsers supporting the canvas element and it's text manipulation functions as described in the html 5 standard, can render the sequence LOGOs without needing the images. The browsers which work with this feature are:

  • Firefox 3.5 and above
  • Safari 4 and above
  • Google Chrome 4 and above

Unfortunately Internet Explorer 8 does not support any html 5 features.

The information content of each motif position is computed as described in the paper by Schneider and Stephens, "Sequence Logos: A New Way to Display Consensus Sequences" but the small-sample correction, e(n), is set to zero for the LOGO displayed in the MEME output. The corrected information content of position i is given by 

            R(i) for amino acids   = log2(20) - (H(i) + e(n))   (1a) 
            R(i) for nucleic acids =    2    - (H(i) + e(n))    (1b)

where H(i) is the entropy of position i,

            H(l) = - (Sum f(a,i) * log2[ f(a,i) ]).             (2)

Here, f(a,i) is the frequency of base or amino acid a at position i, and e(n) is the small-sample correction for an alignment of n letters. The height of letter a in column i is given by 

            height = f(a,i) * R(i)                              (3)

The approximation for the small-sample correction, e(n), is given by:

            e(n) = (s-1) / (2 * ln(2) * n),                     (4)

where s is 4 for nucleotides, 20 for amino acids, and n is the number of sequences in the alignment.

The letters in the logos are colored as follows.
For DNA sequences, the letter categories contain one letter each.

NUCLEIC ACIDS COLOR
A RED
C BLUE
G ORANGE
T GREEN

For proteins, the categories are based on the biochemical properties of the various amino acids.

AMINO ACIDS COLOR PROPERTIES
A, C, F, I, L, V, W and M BLUE Most hydrophobic[Kyte and Doolittle, 1982]
NQST GREEN Polar, non-charged, non-aliphatic residues
DE MAGENTA Acidic
KR RED Positively charged
H PINK  
G ORANGE  
P YELLOW  
Y TURQUOISE  

J. Kyte and R. Doolittle, 1982. "A Simple Method for Displaying the Hydropathic Character of a Protein", J. Mol Biol. 157, 105-132.

Note: the "text" output format of MEME preserves the historical MEME format where LOGOS are replaced by a simplified probability matrix, a relative entropy plot, and a multi-level consensus sequence.

Download LOGO

Logos can be generated on the fly by the meme webservice and you may specify a number of options to customize them to your needs. The options are:

Orientation
Only valid for nucleotide motifs. Generate the standard view or the reverse complemented view of the motif.
SSC
Use small sample correction and show errorbars on the image. Small sample correction is used by the Weblogo program.
Format
The format of the generated image. If the image is to be used on the web then png is recommend. If the image is to be published then eps is recommended.
Width
The width of the generated image in centimetres.
Height
The height of the generated image in centimetres.

Regular Expression

This is a regular expression (RE) describing the motif. In each column, all letters with observed frequencies greater than 0.2 are shown; less-frequent letters are not included in the RE. MEME regular expressions are interpreted as follows: single letters match that letter; groups of letters in square brackets match any of the letters in the group. Regular expressions can be used for searching for the motif in sequences (using, for example, PatMatch) but the search accuracy will usually be better with the PSSM (using, for example MAST.)

Further Analysis

Either as a group or individually the motifs have a number of options for further analysis.

MAST
Finds the best matching positions for a set of motifs in each sequence provided to it, ranked by the combined score of each sequence. For more information about MAST please read the introduction.
FIMO
Finds all matches for a motif. For more information about FIMO please read the introduction.
TOMTOM
Compares a single motif to a database of motifs. For more information about TOMTOM please read the introduction.
GOMO
Identifies possible roles of DNA binding motifs. For more information about GOMO please read the introduction.
BLOCKS
Submit to Blocks Multiple Alignment Processor where you can do several things like create phylogeny trees and search the blocks against a database of other blocks (protein only). For more information about BLOCKS Multiple Alignment Processor please visit the website.
Data Formats

The extracted data is avaliable in the following formats.

PSPM Format
The motif itself is a position-specific probability matrix giving, for each position in the pattern, the observed frequency ("probability") of each possible letter. The probability matrix is printed "sideways"--columns correspond to the letters in the alphabet (in the same order as shown in the simplified motif) and rows corresponding to the positions of the motif, position one first. The motif is preceded by a line starting with "letter-probability matrix:" and containing the length of the alphabet, width of the motif, number of occurrences of the motif, and the E-value of the motif.
Note: Earlier versions of MEME gave the posterior probabilities--the probability after applying a prior on letter frequencies--rather than the observed frequencies. These versions of MEME also gave the number of possible positions for the motif rather than the actual number of occurrences. The output from these earlier versions of MEME can be distinguished by "n=" rather than "nsites=" in the line preceding the matrix.
PSSM Format
The position-specific scoring matrix corresponding to the motif is printed for use by database search programs such as MAST. This matrix is a log-odds matrix calculated by taking 100 times the log (base 2) of the ratio p/f at each position in the motif where p is the probability of a particular letter at that position in the motif, and f is the background frequency of the letter (given in the command line summary section.) This is the same matrix that is used above in computing the p-values of the occurrences of the motif in the Sites and Block Diagrams sections. The scoring matrix is printed "sideways"--columns correspond to the letters in the alphabet (in the same order as shown in the simplified motif) and rows corresponding to the positions of the motif, position one first. The scoring matrix is preceded by a line starting with "log-odds matrix:" and containing the length of the alphabet, width of the motif, number of characters in the training set, the scoring threshold (obsolete) and the motif E-value.
Note: The probability p used to compute the PSSM is not exactly the same as the corresponding value in the Position Specific Probability Matrix (PSPM). The values of p used to compute the PSSM take into account the motif prior, whereas the values in the PSPM are just the observed frequencies of letters in the motif sites.
BLOCKS Format
For use with BLOCKS tools.
FASTA Format
The FASTA format as described here.
Raw Format
Just the sites of the sequences that contributed to the motif. One site per line.
Sites

MEME displays the occurrences (sites) of the motif in the training set. The sites are shown aligned with each other, and the ten sequence positions preceding and following each site are also shown. Each site is identified by the name of the sequence where it occurs, the strand (if both strands of DNA sequences are being used), and the position in the sequence where the site begins. When the DNA strand is specified, '+' means the sequence in the training set, and '-' means the reverse complement of the training set sequence. (For '-' strands, the 'start' position is actually the position on the positive strand where the site ends.) The sites are listed in order of increasing statistical significance (p-value). The p-value of a site is computed from the the match score of the site with the position specific scoring matrix for the motif. The p-value gives the probability of a random string (generated from the background letter frequencies) having the same match score or higher. (This is referred to as the position p-value by the MAST algorithm.)

Block Diagrams

The occurrences of the motif in the training set sequences are shown as coloured blocks on a line. One diagram is printed for each sequence showing all the sites contributating to that motif in that sequence. The sequences are listed in the same order as in the input to make it easier to compare multiple block diagrams. Additionally the best p-value for the sequence/motif combination is listed though this may not be in ascending order as with the sites. The p-value of an occurrence is the probability of a single random subsequence the length of the motif, generated according to the 0-order background model, having a score at least as high as the score of the occurrence. When the DNA strand is specified '+', it means the motif appears from left to right on the sequence, and '-' means the motif appears from right to left on the complementary strand. A sequence position scale is shown at the end of each table of block diagrams.

Combined Block Diagrams

The motif occurrences shown in the motif summary may not be exactly the same as those reported in each motif section because only motifs with a position p-value of 0.0001 that don't overlap other, more significant motif occurrences are shown.

See the documentation for MAST output for the definition of position and combined p-values.