******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYk12.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:49196782-49196826 1.0000 44 chr1:50773164-50773272 1.0000 100 chr1:55876052-55876207 1.0000 100 chr1:66742460-66742768 1.0000 100 chr1:80013627-80013936 1.0000 100 chr1:102860402-102860712 1.0000 100 chr1:107851102-107851193 1.0000 91 chr1:117166472-117166648 1.0000 100 chr1:143489358-143489403 1.0000 45 chr1:144315002-144315052 1.0000 50 chr1:144651329-144651379 1.0000 50 chr1:151855091-151855147 1.0000 56 chr1:151905406-151905446 1.0000 40 chr1:170905405-170905608 1.0000 100 chr1:179675273-179675578 1.0000 100 chr1:190646539-190646850 1.0000 100 chr1:214449005-214449305 1.0000 100 chr1:226701322-226701631 1.0000 100 chr1:241760759-241760935 1.0000 100 chr2:56622988-56623299 1.0000 100 chr2:5351736-5351774 1.0000 38 chr2:47748993-47749030 1.0000 37 chr2:79527350-79527634 1.0000 100 chr2:89650439-89650484 1.0000 45 chr2:91724611-91724658 1.0000 47 chr2:109026784-109026930 1.0000 100 chr2:131172009-131172174 1.0000 100 chr2:170135513-170135811 1.0000 100 chr2:220874876-220875183 1.0000 100 chr3:12984815-12985123 1.0000 100 chr3:54256740-54256776 1.0000 36 chr3:57631716-57632021 1.0000 100 chr3:63966958-63967099 1.0000 100 chr3:83327863-83328166 1.0000 100 chr3:100587918-100588229 1.0000 100 chr3:110355502-110355807 1.0000 100 chr3:112787770-112787974 1.0000 100 chr3:113913410-113913448 1.0000 38 chr3:150081721-150081963 1.0000 100 chr3:176824179-176824488 1.0000 100 chr3:178041064-178041205 1.0000 100 chr3:179760282-179760582 1.0000 100 chr3:180292834-180293141 1.0000 100 chr3:191048912-191048947 1.0000 35 chr4:39399251-39399297 1.0000 46 chr4:71142510-71142562 1.0000 52 chr4:100467396-100467701 1.0000 100 chr4:102224753-102224927 1.0000 100 chr4:109567555-109567641 1.0000 86 chr4:158494157-158494192 1.0000 35 chr4:179313551-179313862 1.0000 100 chr4:181228546-181228599 1.0000 53 chr5:17872575-17872741 1.0000 100 chr5:28356843-28357123 1.0000 100 chr5:38852718-38853030 1.0000 100 chr5:73920549-73920670 1.0000 100 chr5:80205785-80205913 1.0000 100 chr5:80205944-80205972 1.0000 28 chr5:85983802-85984072 1.0000 100 chr5:120021416-120021739 1.0000 100 chr5:156132458-156132767 1.0000 100 chr5:156463181-156463341 1.0000 100 chr5:175697181-175697480 1.0000 100 chr6:11172258-11172318 1.0000 60 chr6:23069655-23069806 1.0000 100 chr6:31465872-31465917 1.0000 45 chr6:80230026-80230337 1.0000 100 chr6:94471871-94472170 1.0000 100 chr6:100086555-100086863 1.0000 100 chr6:101255096-101255140 1.0000 44 chr6:105682220-105682530 1.0000 100 chr6:139657737-139658060 1.0000 100 chr6:153576209-153576508 1.0000 100 chr6:164662624-164662736 1.0000 100 chr7:15241189-15241488 1.0000 100 chr7:27283030-27283334 1.0000 100 chr7:54798312-54798374 1.0000 62 chr7:70971103-70971142 1.0000 39 chr7:71156718-71156882 1.0000 100 chr7:87788327-87788393 1.0000 66 chr7:99368655-99368725 1.0000 70 chr7:120959630-120959944 1.0000 100 chr7:123324490-123324552 1.0000 62 chr7:131116023-131116176 1.0000 100 chr7:133581476-133581782 1.0000 100 chr7:139444308-139444347 1.0000 39 chr8:17042931-17043238 1.0000 100 chr8:21150142-21150447 1.0000 100 chr8:25279469-25279609 1.0000 100 chr8:25279923-25280064 1.0000 100 chr8:27679227-27679272 1.0000 45 chr8:35178843-35179149 1.0000 100 chr8:51184877-51185071 1.0000 100 chr8:52858137-52858312 1.0000 100 chr8:58532202-58532241 1.0000 39 chr8:70435143-70435453 1.0000 100 chr8:117732110-117732165 1.0000 55 chr8:119811524-119811828 1.0000 100 chr8:142958446-142958502 1.0000 56 chr9:6659993-6660190 1.0000 100 chr9:26633488-26633796 1.0000 100 chr9:34117291-34117449 1.0000 100 chr9:38971031-38971235 1.0000 100 chr9:42405478-42405785 1.0000 100 chr9:63675988-63676299 1.0000 100 chr9:67392692-67392896 1.0000 100 chr9:126242770-126243075 1.0000 100 chrX:503249-503405 1.0000 100 chrX:870505-870663 1.0000 100 chrX:47474898-47475082 1.0000 100 chrX:68515044-68515355 1.0000 100 chrX:83712554-83712752 1.0000 100 chrX:90711468-90711748 1.0000 100 chrX:111616071-111616224 1.0000 100 chrX:117320398-117320706 1.0000 100 chrY:503249-503405 1.0000 100 chrY:870505-870663 1.0000 100 chrY:7017041-7017199 1.0000 100 chrY:7209479-7209524 1.0000 45 chrY:10880518-10880584 1.0000 66 chrY:17202757-17202973 1.0000 100 chr10:53015078-53015136 1.0000 58 chr10:73991492-73991538 1.0000 46 chr10:74115084-74115377 1.0000 100 chr10:91490609-91490919 1.0000 100 chr10:103179498-10317955 1.0000 61 chr10:108572611-10857267 1.0000 64 chr10:118219692-11821999 1.0000 100 chr11:9431465-9431520 1.0000 55 chr11:45004628-45004696 1.0000 68 chr11:65519377-65519430 1.0000 53 chr11:65519458-65519584 1.0000 100 chr11:83231898-83231940 1.0000 42 chr11:83737671-83737832 1.0000 100 chr11:95287194-95287506 1.0000 100 chr11:130468483-13046878 1.0000 100 chr12:7837715-7837754 1.0000 39 chr12:7838057-7838069 1.0000 12 chr12:8908731-8908793 1.0000 62 chr12:11105933-11106239 1.0000 100 chr12:27501134-27501445 1.0000 100 chr12:31968445-31968747 1.0000 100 chr12:49722814-49722967 1.0000 100 chr12:80190505-80190816 1.0000 100 chr12:86342583-86342738 1.0000 100 chr12:97854003-97854314 1.0000 100 chr12:123215955-12321610 1.0000 100 chr12:127553439-12755375 1.0000 100 chr13:29973258-29973556 1.0000 100 chr13:45307617-45307653 1.0000 36 chr13:45983413-45983726 1.0000 100 chr13:49666438-49666740 1.0000 100 chr13:77069340-77069538 1.0000 100 chr13:80918769-80918975 1.0000 100 chr13:112578277-11257858 1.0000 100 chr14:36237045-36237274 1.0000 100 chr14:86134945-86135099 1.0000 100 chr14:93459674-93459969 1.0000 100 chr15:29650690-29650727 1.0000 37 chr15:33001728-33001782 1.0000 54 chr15:43452912-43453218 1.0000 100 chr15:44870289-44870318 1.0000 29 chr15:45099005-45099309 1.0000 100 chr15:50312192-50312235 1.0000 43 chr15:50400632-50400847 1.0000 100 chr15:52036069-52036126 1.0000 57 chr15:78506568-78506605 1.0000 37 chr15:89356046-89356084 1.0000 38 chr16:12822695-12822744 1.0000 49 chr16:13852959-13852988 1.0000 29 chr16:22696236-22696298 1.0000 62 chr16:24182927-24183125 1.0000 100 chr16:64800787-64801098 1.0000 100 chr16:70503595-70503893 1.0000 100 chr16:74119569-74119759 1.0000 100 chr16:87940803-87941113 1.0000 100 chr17:2518019-2518174 1.0000 100 chr17:7958509-7958659 1.0000 100 chr17:64491446-64491517 1.0000 71 chr17:67631347-67631658 1.0000 100 chr17:72796742-72796800 1.0000 58 chr17:74122798-74122948 1.0000 100 chr17:82471511-82471807 1.0000 100 chr18:29952436-29952738 1.0000 100 chr19:1128113-1128156 1.0000 43 chr19:8351639-8351674 1.0000 35 chr19:10833468-10833483 1.0000 15 chr19:10833604-10833663 1.0000 59 chr19:14445899-14445950 1.0000 51 chr19:14707541-14707850 1.0000 100 chr19:15944245-15944399 1.0000 100 chr19:36886705-36887013 1.0000 100 chr19:50386910-50387096 1.0000 100 chr19:53763523-53763568 1.0000 45 chr19:53763876-53763893 1.0000 17 chr20:16598141-16598177 1.0000 36 chr20:21136734-21136791 1.0000 57 chr20:22674699-22675010 1.0000 100 chr20:38955176-38955488 1.0000 100 chr20:41528594-41528646 1.0000 52 chr20:43661048-43661123 1.0000 75 chr20:43910124-43910432 1.0000 100 chr20:49735059-49735100 1.0000 41 chr20:60860087-60860137 1.0000 50 chr21:18751573-18751879 1.0000 100 chr21:33222105-33222166 1.0000 61 chr22:24021546-24021597 1.0000 51 chr22:34640392-34640566 1.0000 100 chr22:45509615-45509716 1.0000 100 chr1_KI270765v1_alt:1618 1.0000 50 chr6_GL000251v2_alt:2943 1.0000 41 chr6_GL000254v2_alt:2807 1.0000 45 chr6_GL000256v2_alt:2765 1.0000 48 chrX_KI270880v1_alt:1866 1.0000 100 chrX_KI270913v1_alt:1757 1.0000 100 chr14_KI270847v1_alt:574 1.0000 100 chr15_KI270849v1_alt:202 1.0000 29 chr15_KI270905v1_alt:193 1.0000 37 chr19_KI270865v1_alt:207 1.0000 43 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYk12.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYk12.MemeChipResults/meme_out -mod anr -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYk12.MemeChipResults/background -dna -revcomp -nostatus model: mod= anr nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 50 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 17686 N= 219 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.242 C 0.258 G 0.258 T 0.242 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYk12.MemeChipResults/background): A 0.230 C 0.270 G 0.270 T 0.230 ******************************************************************************** ******************************************************************************** MOTIF AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 width = 31 sites = 50 llr = 2108 E-value = 4.9e-685 ******************************************************************************** -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 Description -------------------------------------------------------------------------------- Simplified A aa::::1:::::a::aaaaa:a:aaaaa911 pos.-specific C ::9aaa::a:a::a::::::::a:::::::: probability G ::::::9:::::::::::::::::::::::: matrix T ::1::::a:a:a::a:::::a:::::::199 bits 2.1 ** * * ** * ** *** ***** 1.9 ** ** *************** ***** 1.7 ** *** ********************** * 1.5 ****** ************************ Relative 1.3 ******************************* Entropy 1.1 ******************************* (60.8 bits) 0.8 ******************************* 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel AACCCCGTCTCTACTAAAAATACAAAAAATT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr14_KI270847v1_alt:574 - 65 6.92e-20 GGTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr22:34640392-34640566 - 4 6.92e-20 AACATGGTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGC chr21:18751573-18751879 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr19:50386910-50387096 + 61 6.92e-20 aacacggtga aaccccgtctctactaaaaatacaaaaaatt agccgggcg chr18:29952436-29952738 - 68 6.92e-20 GA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr16:70503595-70503893 - 66 6.92e-20 GTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr15:45099005-45099309 - 69 6.92e-20 A AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr15:43452912-43453218 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccggacgt chr14:93459674-93459969 - 65 6.92e-20 GGTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr13:80918769-80918975 - 20 6.92e-20 AACACGGTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr13:29973258-29973556 - 66 6.92e-20 GTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr12:31968445-31968747 - 68 6.92e-20 GA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCAT chr12:11105933-11106239 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr9:126242770-126243075 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr9:67392692-67392896 - 19 6.92e-20 AACACGGTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCAGGCGT chr9:42405478-42405785 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr9:38971031-38971235 + 52 6.92e-20 aacacggtga aaccccgtctctactaaaaatacaaaaaatt agccaggcgt chr8:119811524-119811828 + 2 6.92e-20 a aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr8:21150142-21150447 + 2 6.92e-20 a aaccccgtctctactaaaaatacaaaaaatt agccaggcgt chr7:133581476-133581782 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr7:27283030-27283334 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr6:153576209-153576508 + 5 6.92e-20 gtga aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr6:94471871-94472170 + 2 6.92e-20 a aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr5:175697181-175697480 + 5 6.92e-20 gtga aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr3:180292834-180293141 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr3:179760282-179760582 - 67 6.92e-20 TGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr3:110355502-110355807 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr3:83327863-83328166 + 3 6.92e-20 ga aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr3:57631716-57632021 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr2:220874876-220875183 + 1 6.92e-20 . aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr2:170135513-170135811 - 66 6.92e-20 GTGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr2:109026784-109026930 + 69 6.92e-20 aatgtggtga aaccccgtctctactaaaaatacaaaaaatt a chr1:214449005-214449305 - 67 6.92e-20 TGA AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr1:179675273-179675578 - 70 6.92e-20 . AACCCCGTCTCTACTAAAAATACAAAAAATT AGCCGGGCGT chr1:170905405-170905608 + 53 6.92e-20 aacacggtga aaccccgtctctactaaaaatacaaaaaatt agccgggcgt chr17:82471511-82471807 + 5 1.28e-19 gtga aaccccatctctactaaaaatacaaaaaatt agccgggcgt chr11:130468483-13046878 + 2 1.28e-19 a aaccccatctctactaaaaatacaaaaaatt agccgggcgt chr4:102224753-102224927 + 24 1.28e-19 aacacggtga aaccccatctctactaaaaatacaaaaaatt agccaggtgt chr3:178041064-178041205 + 65 1.28e-19 aacacggtga aaccccatctctactaaaaatacaaaaaatt agcca chr22:45509615-45509716 + 19 5.72e-19 aacatagtaa aactccgtctctactaaaaatacaaaaaatt agccaggcgt chrX:83712554-83712752 + 55 6.41e-19 aacacggtga aaccccgtctctactaaatatacaaaaaatt agccggtgtg chr9:6659993-6660190 - 16 1.24e-18 AACACGGTGA AACCCCGTCTCTACTAAAAATACAAAAAAAA TTAGCTGGGC chr4:100467396-100467701 + 2 1.24e-18 a aaccccgtctctactaaaaatacaaaaaaaa aattagccgg chr13:77069340-77069538 + 55 1.42e-18 aatatggtga aatcccgtctctactaaaaatacaaaaaaat tacacctgta chrX:47474898-47475082 + 62 1.42e-18 aacatggtga aatcccgtctctactaaaaatacaaaaattt agccgggt chr8:51184877-51185071 - 15 1.42e-18 AACATGATGA AATCCCGTCTCTACTAAAAATACAAAAAAAT TAGCCGGGCA chr8:52858137-52858312 - 5 2.76e-18 AACACAGAGA AACCCCGTCTCTACTAAAAATACAAAAATGT AGCT chrY:870505-870663 + 19 4.56e-18 aacatggtga aaccccttctctactaaaaatacaaaaatta gccgggcatg chrX:870505-870663 + 19 4.56e-18 aacatggtga aaccccttctctactaaaaatacaaaaatta gccgggcatg chr7:54798312-54798374 + 8 4.70e-18 atggtga aaccccgtctctactgaaaatataaaaaatt agccgggcat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14_KI270847v1_alt:574 6.9e-20 64_[-1]_5 chr22:34640392-34640566 6.9e-20 3_[-1]_66 chr21:18751573-18751879 6.9e-20 69_[-1] chr19:50386910-50387096 6.9e-20 60_[+1]_9 chr18:29952436-29952738 6.9e-20 67_[-1]_2 chr16:70503595-70503893 6.9e-20 65_[-1]_4 chr15:45099005-45099309 6.9e-20 68_[-1]_1 chr15:43452912-43453218 6.9e-20 [+1]_69 chr14:93459674-93459969 6.9e-20 64_[-1]_5 chr13:80918769-80918975 6.9e-20 19_[-1]_50 chr13:29973258-29973556 6.9e-20 65_[-1]_4 chr12:31968445-31968747 6.9e-20 67_[-1]_2 chr12:11105933-11106239 6.9e-20 69_[-1] chr9:126242770-126243075 6.9e-20 69_[-1] chr9:67392692-67392896 6.9e-20 18_[-1]_51 chr9:42405478-42405785 6.9e-20 [+1]_69 chr9:38971031-38971235 6.9e-20 51_[+1]_18 chr8:119811524-119811828 6.9e-20 1_[+1]_68 chr8:21150142-21150447 6.9e-20 1_[+1]_68 chr7:133581476-133581782 6.9e-20 [+1]_69 chr7:27283030-27283334 6.9e-20 [+1]_69 chr6:153576209-153576508 6.9e-20 4_[+1]_65 chr6:94471871-94472170 6.9e-20 1_[+1]_68 chr5:175697181-175697480 6.9e-20 4_[+1]_65 chr3:180292834-180293141 6.9e-20 [+1]_69 chr3:179760282-179760582 6.9e-20 66_[-1]_3 chr3:110355502-110355807 6.9e-20 69_[-1] chr3:83327863-83328166 6.9e-20 2_[+1]_67 chr3:57631716-57632021 6.9e-20 69_[-1] chr2:220874876-220875183 6.9e-20 [+1]_69 chr2:170135513-170135811 6.9e-20 65_[-1]_4 chr2:109026784-109026930 6.9e-20 68_[+1]_1 chr1:214449005-214449305 6.9e-20 66_[-1]_3 chr1:179675273-179675578 6.9e-20 69_[-1] chr1:170905405-170905608 6.9e-20 52_[+1]_17 chr17:82471511-82471807 1.3e-19 4_[+1]_65 chr11:130468483-13046878 1.3e-19 1_[+1]_68 chr4:102224753-102224927 1.3e-19 23_[+1]_46 chr3:178041064-178041205 1.3e-19 64_[+1]_5 chr22:45509615-45509716 5.7e-19 18_[+1]_51 chrX:83712554-83712752 6.4e-19 54_[+1]_15 chr9:6659993-6660190 1.2e-18 15_[-1]_54 chr4:100467396-100467701 1.2e-18 1_[+1]_68 chr13:77069340-77069538 1.4e-18 54_[+1]_15 chrX:47474898-47475082 1.4e-18 61_[+1]_8 chr8:51184877-51185071 1.4e-18 14_[-1]_55 chr8:52858137-52858312 2.8e-18 4_[-1]_65 chrY:870505-870663 4.6e-18 18_[+1]_51 chrX:870505-870663 4.6e-18 18_[+1]_51 chr7:54798312-54798374 4.7e-18 7_[+1]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AACCCCGTCTCTACTAAAAATACAAAAAATT width=31 seqs=50 chr14_KI270847v1_alt:574 ( 65) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr22:34640392-34640566 ( 4) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr21:18751573-18751879 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr19:50386910-50387096 ( 61) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr18:29952436-29952738 ( 68) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr16:70503595-70503893 ( 66) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr15:45099005-45099309 ( 69) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr15:43452912-43453218 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr14:93459674-93459969 ( 65) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr13:80918769-80918975 ( 20) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr13:29973258-29973556 ( 66) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr12:31968445-31968747 ( 68) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr12:11105933-11106239 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr9:126242770-126243075 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr9:67392692-67392896 ( 19) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr9:42405478-42405785 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr9:38971031-38971235 ( 52) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr8:119811524-119811828 ( 2) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr8:21150142-21150447 ( 2) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr7:133581476-133581782 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr7:27283030-27283334 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr6:153576209-153576508 ( 5) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr6:94471871-94472170 ( 2) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr5:175697181-175697480 ( 5) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr3:180292834-180293141 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr3:179760282-179760582 ( 67) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr3:110355502-110355807 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr3:83327863-83328166 ( 3) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr3:57631716-57632021 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr2:220874876-220875183 ( 1) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr2:170135513-170135811 ( 66) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr2:109026784-109026930 ( 69) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr1:214449005-214449305 ( 67) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr1:179675273-179675578 ( 70) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr1:170905405-170905608 ( 53) AACCCCGTCTCTACTAAAAATACAAAAAATT 1 chr17:82471511-82471807 ( 5) AACCCCATCTCTACTAAAAATACAAAAAATT 1 chr11:130468483-13046878 ( 2) AACCCCATCTCTACTAAAAATACAAAAAATT 1 chr4:102224753-102224927 ( 24) AACCCCATCTCTACTAAAAATACAAAAAATT 1 chr3:178041064-178041205 ( 65) AACCCCATCTCTACTAAAAATACAAAAAATT 1 chr22:45509615-45509716 ( 19) AACTCCGTCTCTACTAAAAATACAAAAAATT 1 chrX:83712554-83712752 ( 55) AACCCCGTCTCTACTAAATATACAAAAAATT 1 chr9:6659993-6660190 ( 16) AACCCCGTCTCTACTAAAAATACAAAAAAAA 1 chr4:100467396-100467701 ( 2) AACCCCGTCTCTACTAAAAATACAAAAAAAA 1 chr13:77069340-77069538 ( 55) AATCCCGTCTCTACTAAAAATACAAAAAAAT 1 chrX:47474898-47475082 ( 62) AATCCCGTCTCTACTAAAAATACAAAAATTT 1 chr8:51184877-51185071 ( 15) AATCCCGTCTCTACTAAAAATACAAAAAAAT 1 chr8:52858137-52858312 ( 5) AACCCCGTCTCTACTAAAAATACAAAAATGT 1 chrY:870505-870663 ( 19) AACCCCTTCTCTACTAAAAATACAAAAATTA 1 chrX:870505-870663 ( 19) AACCCCTTCTCTACTAAAAATACAAAAATTA 1 chr7:54798312-54798374 ( 8) AACCCCGTCTCTACTGAAAATATAAAAAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 11116 bayes= 9.4026 E= 4.9e-685 212 -1229 -1229 -1229 212 -1229 -1229 -1229 -1229 180 -1229 -194 -1229 186 -1229 -352 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -152 -1229 170 -252 -1229 -1229 -1229 212 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 189 -1229 -1229 -1229 -1229 -1229 212 212 -1229 -1229 -1229 -1229 189 -1229 -1229 -1229 -1229 -1229 212 209 -1229 -375 -1229 212 -1229 -1229 -1229 212 -1229 -1229 -1229 209 -1229 -1229 -352 212 -1229 -1229 -1229 -1229 -1229 -1229 212 212 -1229 -1229 -1229 -1229 186 -1229 -352 212 -1229 -1229 -1229 212 -1229 -1229 -1229 212 -1229 -1229 -1229 212 -1229 -1229 -1229 212 -1229 -1229 -1229 200 -1229 -1229 -152 -152 -1229 -375 197 -152 -1229 -1229 200 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 50 E= 4.9e-685 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.940000 0.000000 0.060000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.080000 0.000000 0.880000 0.040000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.920000 0.000000 0.000000 0.080000 0.080000 0.000000 0.020000 0.900000 0.080000 0.000000 0.000000 0.920000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCCCGTCTCTACTAAAAATACAAAAAATT MEME-1 regular expression -------------------------------------------------------------------------------- AACCCCGTCTCTACTAAAAATACAAAAAATT -------------------------------------------------------------------------------- Time 44.09 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 width = 26 sites = 50 llr = 1746 E-value = 1.2e-538 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::a::::::::::::a::::::::a pos.-specific C :aa:::a:aa::aa:a::aa:aaa:: probability G a::::::::::a:::::a::::::a: matrix T ::::aa:a::a:::a:::::a::::: bits 2.1 *** * * * * * * 1.9 * ****** **** ******* * * 1.7 ************************** 1.5 ************************** Relative 1.3 ************************** Entropy 1.1 ************************** (50.4 bits) 0.8 ************************** 0.6 ************************** 0.4 ************************** 0.2 ************************** 0.0 -------------------------- Multilevel GCCATTCTCCTGCCTCAGCCTCCCGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chr21:18751573-18751879 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr20:43910124-43910432 + 7 3.88e-16 gttcac gccattctcctgcctcagcctcccga gtagctggga chr20:22674699-22675010 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr19:14707541-14707850 + 8 3.88e-16 ggttcat gccattctcctgcctcagcctcccga gtagctggga chr17:67631347-67631658 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr16:87940803-87941113 + 8 3.88e-16 ggttcat gccattctcctgcctcagcctcccga gtagctggga chr16:74119569-74119759 - 7 3.88e-16 CTGGGTTCAC GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCT chr13:112578277-11257858 - 69 3.88e-16 GTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr13:49666438-49666740 - 64 3.88e-16 TTGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr13:45983413-45983726 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr12:127553439-12755375 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr12:97854003-97854314 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr12:11105933-11106239 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr10:91490609-91490919 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chrX:117320398-117320706 - 69 3.88e-16 GTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chrX:90711468-90711748 - 52 3.88e-16 TTGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chrX:68515044-68515355 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr9:126242770-126243075 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr9:63675988-63676299 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr9:42405478-42405785 - 70 3.88e-16 TTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr9:26633488-26633796 + 7 3.88e-16 gttcat gccattctcctgcctcagcctcccga gtagctggga chr8:70435143-70435453 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr8:35178843-35179149 - 66 3.88e-16 TGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr8:17042931-17043238 + 7 3.88e-16 gttcat gccattctcctgcctcagcctcccga gtagctggga chr7:15241189-15241488 - 63 3.88e-16 TTGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr6:105682220-105682530 - 67 3.88e-16 GGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr6:80230026-80230337 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr5:120021416-120021739 + 15 3.88e-16 ttgggttcat gccattctcctgcctcagcctcccga gtagctggga chr5:85983802-85984072 - 50 3.88e-16 TTGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr5:38852718-38853030 + 8 3.88e-16 ggttcat gccattctcctgcctcagcctcccga gtagctggga chr4:179313551-179313862 - 68 3.88e-16 GGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:180292834-180293141 - 70 3.88e-16 TTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:176824179-176824488 - 69 3.88e-16 GTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:150081721-150081963 - 38 3.88e-16 TTGGGTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:110355502-110355807 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr3:57631716-57632021 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr3:12984815-12985123 + 7 3.88e-16 gttcat gccattctcctgcctcagcctcccga gtagctggga chr2:220874876-220875183 - 70 3.88e-16 TTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr2:56622988-56623299 + 9 3.88e-16 gggttcat gccattctcctgcctcagcctcccga gtagctggga chr1:241760759-241760935 + 70 3.88e-16 ttgggttcat gccattctcctgcctcagcctcccga gtagc chr1:226701322-226701631 - 69 3.88e-16 GTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr1:179675273-179675578 + 6 3.88e-16 ttcat gccattctcctgcctcagcctcccga gtagctggga chr1:102860402-102860712 + 8 3.88e-16 ggttcat gccattctcctgcctcagcctcccga gtagctggga chr1:80013627-80013936 - 69 3.88e-16 GTTCAT GCCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr16:64800787-64801098 + 9 2.04e-15 gggttcat gccattctcctgcctcagcctcccaa gtagctgaga chr12:80190505-80190816 - 68 2.04e-15 GGTTCAC GCCATTCTCCTGCCTCAGCCTTCCGA GTAGCTGGGA chr12:27501134-27501445 - 68 2.04e-15 GGTTCAT GTCATTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr5:156132458-156132767 + 8 2.04e-15 ggttcat gccattcttctgcctcagcctcccga gtagctggga chr1:66742460-66742768 + 7 2.04e-15 gttcat gccattctcctgcctcagcctcctga gtagctggga chr15:43452912-43453218 - 70 2.43e-15 TTCAT GCCATTCTCCTGCGTCAGCCTCCCGA GTAGCTGGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:18751573-18751879 3.9e-16 5_[+2]_69 chr20:43910124-43910432 3.9e-16 6_[+2]_68 chr20:22674699-22675010 3.9e-16 67_[-2]_7 chr19:14707541-14707850 3.9e-16 7_[+2]_67 chr17:67631347-67631658 3.9e-16 67_[-2]_7 chr16:87940803-87941113 3.9e-16 7_[+2]_67 chr16:74119569-74119759 3.9e-16 6_[-2]_68 chr13:112578277-11257858 3.9e-16 68_[-2]_6 chr13:49666438-49666740 3.9e-16 63_[-2]_11 chr13:45983413-45983726 3.9e-16 8_[+2]_66 chr12:127553439-12755375 3.9e-16 8_[+2]_66 chr12:97854003-97854314 3.9e-16 8_[+2]_66 chr12:11105933-11106239 3.9e-16 5_[+2]_69 chr10:91490609-91490919 3.9e-16 67_[-2]_7 chrX:117320398-117320706 3.9e-16 68_[-2]_6 chrX:90711468-90711748 3.9e-16 51_[-2]_23 chrX:68515044-68515355 3.9e-16 67_[-2]_7 chr9:126242770-126243075 3.9e-16 5_[+2]_69 chr9:63675988-63676299 3.9e-16 8_[+2]_66 chr9:42405478-42405785 3.9e-16 69_[-2]_5 chr9:26633488-26633796 3.9e-16 6_[+2]_68 chr8:70435143-70435453 3.9e-16 67_[-2]_7 chr8:35178843-35179149 3.9e-16 65_[-2]_9 chr8:17042931-17043238 3.9e-16 6_[+2]_68 chr7:15241189-15241488 3.9e-16 62_[-2]_12 chr6:105682220-105682530 3.9e-16 66_[-2]_8 chr6:80230026-80230337 3.9e-16 8_[+2]_66 chr5:120021416-120021739 3.9e-16 14_[+2]_60 chr5:85983802-85984072 3.9e-16 49_[-2]_25 chr5:38852718-38853030 3.9e-16 7_[+2]_67 chr4:179313551-179313862 3.9e-16 67_[-2]_7 chr3:180292834-180293141 3.9e-16 69_[-2]_5 chr3:176824179-176824488 3.9e-16 68_[-2]_6 chr3:150081721-150081963 3.9e-16 37_[-2]_37 chr3:110355502-110355807 3.9e-16 5_[+2]_69 chr3:57631716-57632021 3.9e-16 5_[+2]_69 chr3:12984815-12985123 3.9e-16 6_[+2]_68 chr2:220874876-220875183 3.9e-16 69_[-2]_5 chr2:56622988-56623299 3.9e-16 8_[+2]_66 chr1:241760759-241760935 3.9e-16 69_[+2]_5 chr1:226701322-226701631 3.9e-16 68_[-2]_6 chr1:179675273-179675578 3.9e-16 5_[+2]_69 chr1:102860402-102860712 3.9e-16 7_[+2]_67 chr1:80013627-80013936 3.9e-16 68_[-2]_6 chr16:64800787-64801098 2e-15 8_[+2]_66 chr12:80190505-80190816 2e-15 67_[-2]_7 chr12:27501134-27501445 2e-15 67_[-2]_7 chr5:156132458-156132767 2e-15 7_[+2]_67 chr1:66742460-66742768 2e-15 6_[+2]_68 chr15:43452912-43453218 2.4e-15 69_[-2]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCATTCTCCTGCCTCAGCCTCCCGA width=26 seqs=50 chr21:18751573-18751879 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr20:43910124-43910432 ( 7) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr20:22674699-22675010 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr19:14707541-14707850 ( 8) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr17:67631347-67631658 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr16:87940803-87941113 ( 8) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr16:74119569-74119759 ( 7) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr13:112578277-11257858 ( 69) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr13:49666438-49666740 ( 64) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr13:45983413-45983726 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr12:127553439-12755375 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr12:97854003-97854314 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr12:11105933-11106239 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr10:91490609-91490919 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chrX:117320398-117320706 ( 69) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chrX:90711468-90711748 ( 52) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chrX:68515044-68515355 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr9:126242770-126243075 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr9:63675988-63676299 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr9:42405478-42405785 ( 70) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr9:26633488-26633796 ( 7) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr8:70435143-70435453 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr8:35178843-35179149 ( 66) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr8:17042931-17043238 ( 7) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr7:15241189-15241488 ( 63) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr6:105682220-105682530 ( 67) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr6:80230026-80230337 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr5:120021416-120021739 ( 15) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr5:85983802-85984072 ( 50) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr5:38852718-38853030 ( 8) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr4:179313551-179313862 ( 68) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:180292834-180293141 ( 70) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:176824179-176824488 ( 69) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:150081721-150081963 ( 38) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:110355502-110355807 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:57631716-57632021 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr3:12984815-12985123 ( 7) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr2:220874876-220875183 ( 70) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr2:56622988-56623299 ( 9) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr1:241760759-241760935 ( 70) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr1:226701322-226701631 ( 69) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr1:179675273-179675578 ( 6) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr1:102860402-102860712 ( 8) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr1:80013627-80013936 ( 69) GCCATTCTCCTGCCTCAGCCTCCCGA 1 chr16:64800787-64801098 ( 9) GCCATTCTCCTGCCTCAGCCTCCCAA 1 chr12:80190505-80190816 ( 68) GCCATTCTCCTGCCTCAGCCTTCCGA 1 chr12:27501134-27501445 ( 68) GTCATTCTCCTGCCTCAGCCTCCCGA 1 chr5:156132458-156132767 ( 8) GCCATTCTTCTGCCTCAGCCTCCCGA 1 chr1:66742460-66742768 ( 7) GCCATTCTCCTGCCTCAGCCTCCTGA 1 chr15:43452912-43453218 ( 70) GCCATTCTCCTGCGTCAGCCTCCCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 12211 bayes= 7.92612 E= 1.2e-538 -1229 -1229 189 -1229 -1229 186 -1229 -352 -1229 189 -1229 -1229 212 -1229 -1229 -1229 -1229 -1229 -1229 212 -1229 -1229 -1229 212 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 186 -1229 -352 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -1229 189 -1229 -1229 -1229 186 -375 -1229 -1229 -1229 -1229 212 -1229 189 -1229 -1229 212 -1229 -1229 -1229 -1229 -1229 189 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 186 -1229 -352 -1229 189 -1229 -1229 -1229 186 -1229 -352 -352 -1229 186 -1229 212 -1229 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 50 E= 1.2e-538 0.000000 0.000000 1.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.020000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.020000 0.000000 0.980000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTCCCGA MEME-2 regular expression -------------------------------------------------------------------------------- GCCATTCTCCTGCCTCAGCCTCCCGA -------------------------------------------------------------------------------- Time 81.26 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 width = 31 sites = 45 llr = 1698 E-value = 1.9e-524 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::::a::aaaaa2a1aaaa9a22921 pos.-specific C aa9::a:a::a::::::::8::::::::::8 probability G :::9:::::::::::::::::::::::::8: matrix T ::1:a:a:a::a:::::8::::::::881:: bits 2.1 * ** * *** 1.9 * ****** ****** * **** * 1.7 ** ************* * ****** * 1.5 ******************* ****** ** Relative 1.3 ************************** ** Entropy 1.1 ****************************** (54.4 bits) 0.8 ******************************* 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel CCCGTCTCTACTAAAAATACAAAAAATTAGC consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr20:43910124-43910432 - 68 8.13e-20 AC CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr20:22674699-22675010 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr19:14707541-14707850 - 69 8.13e-20 C CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr17:67631347-67631658 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr16:87940803-87941113 - 69 8.13e-20 C CCCGTCTCTACTAAAAATACAAAAAATTAGC CGAGCATGGT chr16:64800787-64801098 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr13:112578277-11257858 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr12:127553439-12755375 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr12:97854003-97854314 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr12:80190505-80190816 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr12:27501134-27501445 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr10:91490609-91490919 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chrX:117320398-117320706 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chrX:68515044-68515355 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr9:63675988-63676299 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr9:26633488-26633796 - 68 8.13e-20 AC CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr8:70435143-70435453 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr8:17042931-17043238 - 68 8.13e-20 AC CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr6:105682220-105682530 + 1 8.13e-20 . cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr6:100086555-100086863 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr6:80230026-80230337 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr5:156132458-156132767 - 69 8.13e-20 C CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr4:179313551-179313862 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr3:176824179-176824488 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr3:100587918-100588229 + 2 8.13e-20 c cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr2:56622988-56623299 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr1:226701322-226701631 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr1:190646539-190646850 - 70 8.13e-20 . CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr1:102860402-102860712 - 69 8.13e-20 C CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr1:80013627-80013936 + 3 8.13e-20 ac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr1:66742460-66742768 - 68 8.13e-20 AC CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr3:12984815-12985123 - 68 6.02e-19 AC CCTGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr11:95287194-95287506 - 70 1.86e-17 . CCCGTCTCTACTAAAAATACAAAAAAAAAAA ATTAGCCGGG chr2:79527350-79527634 + 13 2.90e-16 catggtgaga cccttctctactaaaaatacaaaaaaaaaaa aaaaaaaaaa chr8:117732110-117732165 + 5 5.35e-16 aaac cctgtctctactaaaaatacaaacagttagc cgggcatggt chr15:50400632-50400847 + 48 7.94e-16 catggtgaaa ctcctctctactaaaagtacaaaaaattagc ctggcatggt chr3:112787770-112787974 - 16 1.88e-15 ATGGTGAAAT CCTGTCTCTACTAAAAATACAAGATACTAGC CGGGCATGAT chr1:117166472-117166648 + 70 4.02e-15 atggtgaaac cctgtccctactaaaaatacaaaaaaattag chr19:36886705-36887013 + 3 5.34e-15 ac cccgtctctactaaaaaaaaaaaatacaaaa aattagccgg chr16:24182927-24183125 - 47 7.43e-15 ACGGTGAAAC CCCGTCTCTACTAAAAAAATACAAAAAAAAT TAGCTGGGCG chr14:36237045-36237274 + 43 3.35e-14 acagtgaaac cccgtccctacttaaaaaaaaaaaaaaaaat acaaaaaatc chr10:118219692-11821999 + 4 4.97e-14 aac cccgtctctactaaaaaaatacaaaaaatta gccgggagtg chr5:38852718-38853030 - 70 8.80e-14 . CCCGTCTCTACTAAAAAATACAAAAAATTAG CCGGGCGTGG chr19:15944245-15944399 - 3 1.06e-13 ATGGTGAAAC CTCGTCTCTACTAAAAAAAAAATACAAAAAA TT chrY:17202757-17202973 - 20 7.48e-13 ATGGTCAATC CCCATCTCTAATAAAATACAAAAAAAAAAAA AAAAATAGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:43910124-43910432 8.1e-20 67_[-3]_2 chr20:22674699-22675010 8.1e-20 1_[+3]_68 chr19:14707541-14707850 8.1e-20 68_[-3]_1 chr17:67631347-67631658 8.1e-20 1_[+3]_68 chr16:87940803-87941113 8.1e-20 68_[-3]_1 chr16:64800787-64801098 8.1e-20 69_[-3] chr13:112578277-11257858 8.1e-20 2_[+3]_67 chr12:127553439-12755375 8.1e-20 69_[-3] chr12:97854003-97854314 8.1e-20 69_[-3] chr12:80190505-80190816 8.1e-20 1_[+3]_68 chr12:27501134-27501445 8.1e-20 1_[+3]_68 chr10:91490609-91490919 8.1e-20 1_[+3]_68 chrX:117320398-117320706 8.1e-20 2_[+3]_67 chrX:68515044-68515355 8.1e-20 1_[+3]_68 chr9:63675988-63676299 8.1e-20 69_[-3] chr9:26633488-26633796 8.1e-20 67_[-3]_2 chr8:70435143-70435453 8.1e-20 1_[+3]_68 chr8:17042931-17043238 8.1e-20 67_[-3]_2 chr6:105682220-105682530 8.1e-20 [+3]_69 chr6:100086555-100086863 8.1e-20 2_[+3]_67 chr6:80230026-80230337 8.1e-20 69_[-3] chr5:156132458-156132767 8.1e-20 68_[-3]_1 chr4:179313551-179313862 8.1e-20 1_[+3]_68 chr3:176824179-176824488 8.1e-20 2_[+3]_67 chr3:100587918-100588229 8.1e-20 1_[+3]_68 chr2:56622988-56623299 8.1e-20 69_[-3] chr1:226701322-226701631 8.1e-20 2_[+3]_67 chr1:190646539-190646850 8.1e-20 69_[-3] chr1:102860402-102860712 8.1e-20 68_[-3]_1 chr1:80013627-80013936 8.1e-20 2_[+3]_67 chr1:66742460-66742768 8.1e-20 67_[-3]_2 chr3:12984815-12985123 6e-19 67_[-3]_2 chr11:95287194-95287506 1.9e-17 69_[-3] chr2:79527350-79527634 2.9e-16 12_[+3]_57 chr8:117732110-117732165 5.4e-16 4_[+3]_20 chr15:50400632-50400847 7.9e-16 47_[+3]_22 chr3:112787770-112787974 1.9e-15 15_[-3]_54 chr1:117166472-117166648 4e-15 69_[+3] chr19:36886705-36887013 5.3e-15 2_[+3]_67 chr16:24182927-24183125 7.4e-15 46_[-3]_23 chr14:36237045-36237274 3.4e-14 42_[+3]_27 chr10:118219692-11821999 5e-14 3_[+3]_66 chr5:38852718-38853030 8.8e-14 69_[-3] chr19:15944245-15944399 1.1e-13 2_[-3]_67 chrY:17202757-17202973 7.5e-13 19_[-3]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCGTCTCTACTAAAAATACAAAAAATTAGC width=31 seqs=45 chr20:43910124-43910432 ( 68) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr20:22674699-22675010 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr19:14707541-14707850 ( 69) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr17:67631347-67631658 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr16:87940803-87941113 ( 69) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr16:64800787-64801098 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr13:112578277-11257858 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr12:127553439-12755375 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr12:97854003-97854314 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr12:80190505-80190816 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr12:27501134-27501445 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr10:91490609-91490919 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chrX:117320398-117320706 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chrX:68515044-68515355 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr9:63675988-63676299 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr9:26633488-26633796 ( 68) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr8:70435143-70435453 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr8:17042931-17043238 ( 68) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr6:105682220-105682530 ( 1) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr6:100086555-100086863 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr6:80230026-80230337 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr5:156132458-156132767 ( 69) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr4:179313551-179313862 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr3:176824179-176824488 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr3:100587918-100588229 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr2:56622988-56623299 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:226701322-226701631 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:190646539-190646850 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:102860402-102860712 ( 69) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:80013627-80013936 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:66742460-66742768 ( 68) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr3:12984815-12985123 ( 68) CCTGTCTCTACTAAAAATACAAAAAATTAGC 1 chr11:95287194-95287506 ( 70) CCCGTCTCTACTAAAAATACAAAAAAAAAAA 1 chr2:79527350-79527634 ( 13) CCCTTCTCTACTAAAAATACAAAAAAAAAAA 1 chr8:117732110-117732165 ( 5) CCTGTCTCTACTAAAAATACAAACAGTTAGC 1 chr15:50400632-50400847 ( 48) CTCCTCTCTACTAAAAGTACAAAAAATTAGC 1 chr3:112787770-112787974 ( 16) CCTGTCTCTACTAAAAATACAAGATACTAGC 1 chr1:117166472-117166648 ( 70) CCTGTCCCTACTAAAAATACAAAAAAATTAG 1 chr19:36886705-36887013 ( 3) CCCGTCTCTACTAAAAAAAAAAAATACAAAA 1 chr16:24182927-24183125 ( 47) CCCGTCTCTACTAAAAAAATACAAAAAAAAT 1 chr14:36237045-36237274 ( 43) CCCGTCCCTACTTAAAAAAAAAAAAAAAAAT 1 chr10:118219692-11821999 ( 4) CCCGTCTCTACTAAAAAAATACAAAAAATTA 1 chr5:38852718-38853030 ( 70) CCCGTCTCTACTAAAAAATACAAAAAATTAG 1 chr19:15944245-15944399 ( 3) CTCGTCTCTACTAAAAAAAAAATACAAAAAA 1 chrY:17202757-17202973 ( 20) CCCATCTCTAATAAAATACAAAAAAAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 11116 bayes= 9.82996 E= 1.9e-524 -1214 189 -1214 -1214 -1214 182 -1214 -237 -1214 175 -1214 -137 -337 -360 179 -337 -1214 -1214 -1214 212 -1214 189 -1214 -1214 -1214 -260 -1214 206 -1214 189 -1214 -1214 -1214 -1214 -1214 212 212 -1214 -1214 -1214 -337 186 -1214 -1214 -1214 -1214 -1214 212 209 -1214 -1214 -337 212 -1214 -1214 -1214 212 -1214 -1214 -1214 212 -1214 -1214 -1214 206 -1214 -360 -337 -56 -1214 -1214 188 206 -360 -1214 -337 -105 164 -1214 -237 209 -360 -1214 -1214 206 -260 -1214 -1214 206 -1214 -360 -337 209 -360 -1214 -1214 202 -360 -1214 -237 209 -1214 -360 -1214 -20 -260 -1214 172 -37 -1214 -1214 184 202 -1214 -1214 -179 -20 -1214 153 -337 -79 153 -260 -237 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 45 E= 1.9e-524 0.000000 1.000000 0.000000 0.000000 0.000000 0.955556 0.000000 0.044444 0.000000 0.911111 0.000000 0.088889 0.022222 0.022222 0.933333 0.022222 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.044444 0.000000 0.955556 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.022222 0.977778 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.977778 0.000000 0.000000 0.022222 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.955556 0.000000 0.022222 0.022222 0.155556 0.000000 0.000000 0.844444 0.955556 0.022222 0.000000 0.022222 0.111111 0.844444 0.000000 0.044444 0.977778 0.022222 0.000000 0.000000 0.955556 0.044444 0.000000 0.000000 0.955556 0.000000 0.022222 0.022222 0.977778 0.022222 0.000000 0.000000 0.933333 0.022222 0.000000 0.044444 0.977778 0.000000 0.022222 0.000000 0.200000 0.044444 0.000000 0.755556 0.177778 0.000000 0.000000 0.822222 0.933333 0.000000 0.000000 0.066667 0.200000 0.000000 0.777778 0.022222 0.133333 0.777778 0.044444 0.044444 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-3 regular expression -------------------------------------------------------------------------------- CCCGTCTCTACTAAAAATACAAAAAA[TA]TA[GA]C -------------------------------------------------------------------------------- Time 114.88 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGGCGCCTGTAATCCCA MEME-4 width = 18 sites = 50 llr = 1234 E-value = 6.0e-335 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::::::aa::::a pos.-specific C ::::a:aa::::::aaa: probability G :aaa:a:::a:::::::: matrix T a:::::::a:a::a:::: bits 2.1 * * **** * 1.9 ****************** 1.7 ****************** 1.5 ****************** Relative 1.3 ****************** Entropy 1.1 ****************** (35.6 bits) 0.8 ****************** 0.6 ****************** 0.4 ****************** 0.2 ****************** 0.0 ------------------ Multilevel TGGGCGCCTGTAATCCCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chr14_KI270847v1_alt:574 - 32 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr21:18751573-18751879 - 37 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr20:22674699-22675010 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr19:36886705-36887013 + 53 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr19:14707541-14707850 - 39 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr19:14445899-14445950 + 15 1.89e-11 ggcatggtgg tgggcgcctgtaatccca gctactcagg chr19:8351639-8351674 + 7 1.89e-11 tggtgg tgggcgcctgtaatccca gctactcaga chr17:67631347-67631658 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr15:45099005-45099309 - 36 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr15:43452912-43453218 + 47 1.89e-11 gacgtggtgg tgggcgcctgtaatccca gctactcggg chr13:112578277-11257858 + 46 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr13:49666438-49666740 + 41 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr13:45983413-45983726 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr13:29973258-29973556 - 33 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr12:127553439-12755375 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr12:97854003-97854314 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr12:80190505-80190816 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcgga chr12:31968445-31968747 - 35 1.89e-11 GGCATGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr12:27501134-27501445 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr12:11105933-11106239 - 37 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chrX:90711468-90711748 + 29 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chrX:68515044-68515355 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr9:26633488-26633796 - 38 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr8:119811524-119811828 + 48 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr8:70435143-70435453 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr8:21150142-21150447 + 48 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr7:27283030-27283334 + 47 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr7:15241189-15241488 + 40 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr6:105682220-105682530 + 44 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr6:94471871-94472170 + 48 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr6:80230026-80230337 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr5:175697181-175697480 + 51 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr5:156132458-156132767 - 39 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr5:120021416-120021739 - 46 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr5:38852718-38853030 - 39 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr4:179313551-179313862 + 45 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr3:180292834-180293141 + 47 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr3:150081721-150081963 + 15 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr3:110355502-110355807 - 37 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr3:83327863-83328166 + 49 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr3:57631716-57632021 - 37 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr3:12984815-12985123 - 38 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr2:220874876-220875183 + 47 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr2:170135513-170135811 - 33 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr2:56622988-56623299 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr1:226701322-226701631 + 46 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg chr1:190646539-190646850 - 40 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr1:179675273-179675578 - 37 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr1:102860402-102860712 - 39 1.89e-11 GGCGTGGTGG TGGGCGCCTGTAATCCCA GCTACTCGGG chr1:80013627-80013936 + 46 1.89e-11 ggcgtggtgg tgggcgcctgtaatccca gctactcggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14_KI270847v1_alt:574 1.9e-11 31_[-4]_51 chr21:18751573-18751879 1.9e-11 36_[-4]_46 chr20:22674699-22675010 1.9e-11 44_[+4]_38 chr19:36886705-36887013 1.9e-11 52_[+4]_30 chr19:14707541-14707850 1.9e-11 38_[-4]_44 chr19:14445899-14445950 1.9e-11 14_[+4]_19 chr19:8351639-8351674 1.9e-11 6_[+4]_11 chr17:67631347-67631658 1.9e-11 44_[+4]_38 chr15:45099005-45099309 1.9e-11 35_[-4]_47 chr15:43452912-43453218 1.9e-11 46_[+4]_36 chr13:112578277-11257858 1.9e-11 45_[+4]_37 chr13:49666438-49666740 1.9e-11 40_[+4]_42 chr13:45983413-45983726 1.9e-11 39_[-4]_43 chr13:29973258-29973556 1.9e-11 32_[-4]_50 chr12:127553439-12755375 1.9e-11 39_[-4]_43 chr12:97854003-97854314 1.9e-11 39_[-4]_43 chr12:80190505-80190816 1.9e-11 44_[+4]_38 chr12:31968445-31968747 1.9e-11 34_[-4]_48 chr12:27501134-27501445 1.9e-11 44_[+4]_38 chr12:11105933-11106239 1.9e-11 36_[-4]_46 chrX:90711468-90711748 1.9e-11 28_[+4]_54 chrX:68515044-68515355 1.9e-11 44_[+4]_38 chr9:26633488-26633796 1.9e-11 37_[-4]_45 chr8:119811524-119811828 1.9e-11 47_[+4]_35 chr8:70435143-70435453 1.9e-11 44_[+4]_38 chr8:21150142-21150447 1.9e-11 47_[+4]_35 chr7:27283030-27283334 1.9e-11 46_[+4]_36 chr7:15241189-15241488 1.9e-11 39_[+4]_43 chr6:105682220-105682530 1.9e-11 43_[+4]_39 chr6:94471871-94472170 1.9e-11 47_[+4]_35 chr6:80230026-80230337 1.9e-11 39_[-4]_43 chr5:175697181-175697480 1.9e-11 50_[+4]_32 chr5:156132458-156132767 1.9e-11 38_[-4]_44 chr5:120021416-120021739 1.9e-11 45_[-4]_37 chr5:38852718-38853030 1.9e-11 38_[-4]_44 chr4:179313551-179313862 1.9e-11 44_[+4]_38 chr3:180292834-180293141 1.9e-11 46_[+4]_36 chr3:150081721-150081963 1.9e-11 14_[+4]_68 chr3:110355502-110355807 1.9e-11 36_[-4]_46 chr3:83327863-83328166 1.9e-11 48_[+4]_34 chr3:57631716-57632021 1.9e-11 36_[-4]_46 chr3:12984815-12985123 1.9e-11 37_[-4]_45 chr2:220874876-220875183 1.9e-11 46_[+4]_36 chr2:170135513-170135811 1.9e-11 32_[-4]_50 chr2:56622988-56623299 1.9e-11 39_[-4]_43 chr1:226701322-226701631 1.9e-11 45_[+4]_37 chr1:190646539-190646850 1.9e-11 39_[-4]_43 chr1:179675273-179675578 1.9e-11 36_[-4]_46 chr1:102860402-102860712 1.9e-11 38_[-4]_44 chr1:80013627-80013936 1.9e-11 45_[+4]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGGCGCCTGTAATCCCA width=18 seqs=50 chr14_KI270847v1_alt:574 ( 32) TGGGCGCCTGTAATCCCA 1 chr21:18751573-18751879 ( 37) TGGGCGCCTGTAATCCCA 1 chr20:22674699-22675010 ( 45) TGGGCGCCTGTAATCCCA 1 chr19:36886705-36887013 ( 53) TGGGCGCCTGTAATCCCA 1 chr19:14707541-14707850 ( 39) TGGGCGCCTGTAATCCCA 1 chr19:14445899-14445950 ( 15) TGGGCGCCTGTAATCCCA 1 chr19:8351639-8351674 ( 7) TGGGCGCCTGTAATCCCA 1 chr17:67631347-67631658 ( 45) TGGGCGCCTGTAATCCCA 1 chr15:45099005-45099309 ( 36) TGGGCGCCTGTAATCCCA 1 chr15:43452912-43453218 ( 47) TGGGCGCCTGTAATCCCA 1 chr13:112578277-11257858 ( 46) TGGGCGCCTGTAATCCCA 1 chr13:49666438-49666740 ( 41) TGGGCGCCTGTAATCCCA 1 chr13:45983413-45983726 ( 40) TGGGCGCCTGTAATCCCA 1 chr13:29973258-29973556 ( 33) TGGGCGCCTGTAATCCCA 1 chr12:127553439-12755375 ( 40) TGGGCGCCTGTAATCCCA 1 chr12:97854003-97854314 ( 40) TGGGCGCCTGTAATCCCA 1 chr12:80190505-80190816 ( 45) TGGGCGCCTGTAATCCCA 1 chr12:31968445-31968747 ( 35) TGGGCGCCTGTAATCCCA 1 chr12:27501134-27501445 ( 45) TGGGCGCCTGTAATCCCA 1 chr12:11105933-11106239 ( 37) TGGGCGCCTGTAATCCCA 1 chrX:90711468-90711748 ( 29) TGGGCGCCTGTAATCCCA 1 chrX:68515044-68515355 ( 45) TGGGCGCCTGTAATCCCA 1 chr9:26633488-26633796 ( 38) TGGGCGCCTGTAATCCCA 1 chr8:119811524-119811828 ( 48) TGGGCGCCTGTAATCCCA 1 chr8:70435143-70435453 ( 45) TGGGCGCCTGTAATCCCA 1 chr8:21150142-21150447 ( 48) TGGGCGCCTGTAATCCCA 1 chr7:27283030-27283334 ( 47) TGGGCGCCTGTAATCCCA 1 chr7:15241189-15241488 ( 40) TGGGCGCCTGTAATCCCA 1 chr6:105682220-105682530 ( 44) TGGGCGCCTGTAATCCCA 1 chr6:94471871-94472170 ( 48) TGGGCGCCTGTAATCCCA 1 chr6:80230026-80230337 ( 40) TGGGCGCCTGTAATCCCA 1 chr5:175697181-175697480 ( 51) TGGGCGCCTGTAATCCCA 1 chr5:156132458-156132767 ( 39) TGGGCGCCTGTAATCCCA 1 chr5:120021416-120021739 ( 46) TGGGCGCCTGTAATCCCA 1 chr5:38852718-38853030 ( 39) TGGGCGCCTGTAATCCCA 1 chr4:179313551-179313862 ( 45) TGGGCGCCTGTAATCCCA 1 chr3:180292834-180293141 ( 47) TGGGCGCCTGTAATCCCA 1 chr3:150081721-150081963 ( 15) TGGGCGCCTGTAATCCCA 1 chr3:110355502-110355807 ( 37) TGGGCGCCTGTAATCCCA 1 chr3:83327863-83328166 ( 49) TGGGCGCCTGTAATCCCA 1 chr3:57631716-57632021 ( 37) TGGGCGCCTGTAATCCCA 1 chr3:12984815-12985123 ( 38) TGGGCGCCTGTAATCCCA 1 chr2:220874876-220875183 ( 47) TGGGCGCCTGTAATCCCA 1 chr2:170135513-170135811 ( 33) TGGGCGCCTGTAATCCCA 1 chr2:56622988-56623299 ( 40) TGGGCGCCTGTAATCCCA 1 chr1:226701322-226701631 ( 46) TGGGCGCCTGTAATCCCA 1 chr1:190646539-190646850 ( 40) TGGGCGCCTGTAATCCCA 1 chr1:179675273-179675578 ( 37) TGGGCGCCTGTAATCCCA 1 chr1:102860402-102860712 ( 39) TGGGCGCCTGTAATCCCA 1 chr1:80013627-80013936 ( 46) TGGGCGCCTGTAATCCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 13963 bayes= 8.61183 E= 6.0e-335 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 189 -1229 -1229 -1229 -1229 189 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -1229 -1229 -1229 212 212 -1229 -1229 -1229 212 -1229 -1229 -1229 -1229 -1229 -1229 212 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 212 -1229 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 50 E= 6.0e-335 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGCGCCTGTAATCCCA MEME-4 regular expression -------------------------------------------------------------------------------- TGGGCGCCTGTAATCCCA -------------------------------------------------------------------------------- Time 145.27 secs. ******************************************************************************** ******************************************************************************** MOTIF TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 width = 31 sites = 50 llr = 1886 E-value = 2.2e-587 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::::::a::a:a:::2:2:9::a::a:2: pos.-specific C :::a:::::3::a:::9:a89:aa:aa:9:a probability G ::a::aaa::::::aa:8:::1:::::::8: matrix T a:::a::::7a:::::1:::::::::::1:: bits 2.1 * * * ** * * * 1.9 *** ** ** ** * * ** ** 1.7 ********* ****** * ******* * 1.5 ********* ****** * ********* * Relative 1.3 ********* ******* * ********* * Entropy 1.1 ******************************* (54.4 bits) 0.8 ******************************* 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel TAGCTGGGATTACAGGCGCCCACCACCACGC consensus C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr14:93459674-93459969 + 28 4.04e-19 gcctcccgag tagctgggattacaggcgcccaccaccacgc ccggctaatt chr7:133581476-133581782 - 38 4.04e-19 GCCTCCCGAG TAGCTGGGATTACAGGCGCCCACCACCACGC CCGGCTAATT chr7:120959630-120959944 + 37 4.04e-19 gcctcccgag tagctgggattacaggcgcccaccaccacgc ccggctaatt chr6:139657737-139658060 + 42 4.04e-19 gcctcccgag tagctgggattacaggcgcccaccaccacgc ccggctaatt chr6:100086555-100086863 - 37 4.04e-19 GCCTCCCGAG TAGCTGGGATTACAGGCGCCCACCACCACGC CCGGCTAATT chr5:28356843-28357123 + 41 4.04e-19 gcctcccgag tagctgggattacaggcgcccaccaccacgc ccggctaatt chr3:100587918-100588229 - 36 4.04e-19 GCCTCCCGAG TAGCTGGGATTACAGGCGCCCACCACCACGC CCGGCTAATT chr20:43910124-43910432 + 34 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr20:38955176-38955488 - 36 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr18:29952436-29952738 + 31 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr17:82471511-82471807 - 42 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr16:70503595-70503893 + 29 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr10:91490609-91490919 - 36 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chrX:117320398-117320706 - 37 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr9:63675988-63676299 + 36 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr9:42405478-42405785 - 38 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr8:17042931-17043238 + 34 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr5:85983802-85984072 - 18 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr4:100467396-100467701 - 43 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr3:176824179-176824488 - 37 8.78e-19 GCCTCCCGAG TAGCTGGGACTACAGGCGCCCACCACCACGC CCGGCTAATT chr1:214449005-214449305 + 30 8.78e-19 gcctcccgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr1:66742460-66742768 + 34 8.78e-19 gcctcctgag tagctgggactacaggcgcccaccaccacgc ccggctaatt chr17:72796742-72796800 + 28 1.22e-18 gcctcctgag tagctgggattacaggcacccaccaccacgc chr9:126242770-126243075 + 33 1.22e-18 gcctcccgag tagctgggattacaggcacccaccaccacgc ccggctaatt chr8:35178843-35179149 - 34 1.22e-18 GCCTCCCGAG TAGCTGGGATTACAGGCACCCACCACCACGC CCGGGTAATT chr7:139444308-139444347 + 1 2.66e-18 . tagctgggattacaggtgcccaccaccacgc ctggctaa chr3:179760282-179760582 + 30 2.66e-18 gcctcccgag tagctgggattacaggtgcccaccaccacgc ccggctaatt chr11:130468483-13046878 - 39 5.57e-18 GCCTCCCGAG TAGCTGGGATTACAGGCGCCCGCCACCACGC CCGGCTAATT chr11:95287194-95287506 + 30 5.57e-18 gcctcccgag tagctgggattacaggcgcccgccaccacgc ccggctaatt chr22:45509615-45509716 - 56 7.24e-18 CCCTCCTGAG TAGCTGGGATTACAGGCGCCTACCACCACGC CTGGCTAATT chr16:64800787-64801098 + 36 7.24e-18 gcctcccaag tagctgagattacaggcgcccaccaccacgc ccggctaatt chrY:7209479-7209524 - 2 8.51e-18 GCCTGCCGAG TAGCTGGGATTACAGGTGCCCACCACCACAC C chr10:118219692-11821999 - 40 1.02e-17 GCCTCCCAAG TAGCTGGGATTACAGGCGCCCACCACCACTC CCGGCTAATT chr1_KI270765v1_alt:1618 - 7 1.19e-17 AGCTCCAAAG TAGCTGGGATTACAGGCACACACCACCACAC CCGGCT chr2:91724611-91724658 + 9 1.19e-17 ctccaaag tagctgggattacaggcacacaccaccacac ccggctga chr2:89650439-89650484 + 9 1.19e-17 ctccaaag tagctgggattacaggcacacaccaccacac ccggct chr1:144651329-144651379 - 7 1.19e-17 AGCTCCAAAG TAGCTGGGATTACAGGCACACACCACCACAC CCGGCT chr1:144315002-144315052 + 14 1.19e-17 agctccaaag tagctgggattacaggcacacaccaccacac ccggct chr1:143489358-143489403 + 9 1.19e-17 ctccaaag tagctgggattacaggcacacaccaccacac ccggct chr16:87940803-87941113 + 35 4.98e-17 gcctcccgag tagctgggattacaggcgcccgccaccatgc tcggctaatt chr6:153576209-153576508 - 42 6.31e-17 GCCTCCCGAG TAGCTGGGATTACAGGCGCCCGCCATCACGC CCGGCTAATT chr10:103179498-10317955 + 7 6.72e-17 cccaag tagctgggattacaggtgcacaccaccatgc ccggctaatt chr16:24182927-24183125 + 9 1.01e-16 ctcccgag tagctgggactacaggtgcccatcaccacgc ccagctaatt chr16:12822695-12822744 + 11 2.18e-16 gcctcccgat tagctgggattacaggcactcaccaccacgt ctggctaa chr15:78506568-78506605 - 2 2.18e-16 CCGAG TAGTTGGGATTACAGGGGCCCACCACCACGC C chr11:83231898-83231940 - 10 2.76e-16 AA TAGCTGGGATTACAGGCACACACCATCATGC CCGACTAAT chr7:99368655-99368725 + 15 2.91e-16 agtctccgag tagctgggattacaggcgtataccaccacgc ctggctaatt chr11:45004628-45004696 - 14 5.16e-16 GCCTCCCAAG TTGCTGGGATTACAGGCACTCACCACCACAC CTGGCTAACT chr4:102224753-102224927 - 61 6.70e-16 CCTCCAGAG TAGCTGGGACTATAAGCGCCCACCACCACAC CTGGCTAATT chr2:79527350-79527634 - 62 2.91e-15 CTCCTGAG TAGCTGAGATTACAGGTGCCAACCACCAGGC CTGGTTAATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:93459674-93459969 4e-19 27_[+5]_42 chr7:133581476-133581782 4e-19 37_[-5]_32 chr7:120959630-120959944 4e-19 36_[+5]_33 chr6:139657737-139658060 4e-19 41_[+5]_28 chr6:100086555-100086863 4e-19 36_[-5]_33 chr5:28356843-28357123 4e-19 40_[+5]_29 chr3:100587918-100588229 4e-19 35_[-5]_34 chr20:43910124-43910432 8.8e-19 33_[+5]_36 chr20:38955176-38955488 8.8e-19 35_[-5]_34 chr18:29952436-29952738 8.8e-19 30_[+5]_39 chr17:82471511-82471807 8.8e-19 41_[-5]_28 chr16:70503595-70503893 8.8e-19 28_[+5]_41 chr10:91490609-91490919 8.8e-19 35_[-5]_34 chrX:117320398-117320706 8.8e-19 36_[-5]_33 chr9:63675988-63676299 8.8e-19 35_[+5]_34 chr9:42405478-42405785 8.8e-19 37_[-5]_32 chr8:17042931-17043238 8.8e-19 33_[+5]_36 chr5:85983802-85984072 8.8e-19 17_[-5]_52 chr4:100467396-100467701 8.8e-19 42_[-5]_27 chr3:176824179-176824488 8.8e-19 36_[-5]_33 chr1:214449005-214449305 8.8e-19 29_[+5]_40 chr1:66742460-66742768 8.8e-19 33_[+5]_36 chr17:72796742-72796800 1.2e-18 27_[+5] chr9:126242770-126243075 1.2e-18 32_[+5]_37 chr8:35178843-35179149 1.2e-18 33_[-5]_36 chr7:139444308-139444347 2.7e-18 [+5]_8 chr3:179760282-179760582 2.7e-18 29_[+5]_40 chr11:130468483-13046878 5.6e-18 38_[-5]_31 chr11:95287194-95287506 5.6e-18 29_[+5]_40 chr22:45509615-45509716 7.2e-18 55_[-5]_14 chr16:64800787-64801098 7.2e-18 35_[+5]_34 chrY:7209479-7209524 8.5e-18 1_[-5]_13 chr10:118219692-11821999 1e-17 39_[-5]_30 chr1_KI270765v1_alt:1618 1.2e-17 6_[-5]_13 chr2:91724611-91724658 1.2e-17 8_[+5]_8 chr2:89650439-89650484 1.2e-17 8_[+5]_6 chr1:144651329-144651379 1.2e-17 6_[-5]_13 chr1:144315002-144315052 1.2e-17 13_[+5]_6 chr1:143489358-143489403 1.2e-17 8_[+5]_6 chr16:87940803-87941113 5e-17 34_[+5]_35 chr6:153576209-153576508 6.3e-17 41_[-5]_28 chr10:103179498-10317955 6.7e-17 6_[+5]_24 chr16:24182927-24183125 1e-16 8_[+5]_61 chr16:12822695-12822744 2.2e-16 10_[+5]_8 chr15:78506568-78506605 2.2e-16 1_[-5]_5 chr11:83231898-83231940 2.8e-16 9_[-5]_2 chr7:99368655-99368725 2.9e-16 14_[+5]_25 chr11:45004628-45004696 5.2e-16 13_[-5]_24 chr4:102224753-102224927 6.7e-16 60_[-5]_9 chr2:79527350-79527634 2.9e-15 61_[-5]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAGCTGGGAYTACAGGCGCCCACCACCACGC width=31 seqs=50 chr14:93459674-93459969 ( 28) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr7:133581476-133581782 ( 38) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr7:120959630-120959944 ( 37) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr6:139657737-139658060 ( 42) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr6:100086555-100086863 ( 37) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr5:28356843-28357123 ( 41) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr3:100587918-100588229 ( 36) TAGCTGGGATTACAGGCGCCCACCACCACGC 1 chr20:43910124-43910432 ( 34) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr20:38955176-38955488 ( 36) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr18:29952436-29952738 ( 31) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr17:82471511-82471807 ( 42) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr16:70503595-70503893 ( 29) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr10:91490609-91490919 ( 36) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chrX:117320398-117320706 ( 37) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr9:63675988-63676299 ( 36) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr9:42405478-42405785 ( 38) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr8:17042931-17043238 ( 34) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr5:85983802-85984072 ( 18) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr4:100467396-100467701 ( 43) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr3:176824179-176824488 ( 37) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr1:214449005-214449305 ( 30) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr1:66742460-66742768 ( 34) TAGCTGGGACTACAGGCGCCCACCACCACGC 1 chr17:72796742-72796800 ( 28) TAGCTGGGATTACAGGCACCCACCACCACGC 1 chr9:126242770-126243075 ( 33) TAGCTGGGATTACAGGCACCCACCACCACGC 1 chr8:35178843-35179149 ( 34) TAGCTGGGATTACAGGCACCCACCACCACGC 1 chr7:139444308-139444347 ( 1) TAGCTGGGATTACAGGTGCCCACCACCACGC 1 chr3:179760282-179760582 ( 30) TAGCTGGGATTACAGGTGCCCACCACCACGC 1 chr11:130468483-13046878 ( 39) TAGCTGGGATTACAGGCGCCCGCCACCACGC 1 chr11:95287194-95287506 ( 30) TAGCTGGGATTACAGGCGCCCGCCACCACGC 1 chr22:45509615-45509716 ( 56) TAGCTGGGATTACAGGCGCCTACCACCACGC 1 chr16:64800787-64801098 ( 36) TAGCTGAGATTACAGGCGCCCACCACCACGC 1 chrY:7209479-7209524 ( 2) TAGCTGGGATTACAGGTGCCCACCACCACAC 1 chr10:118219692-11821999 ( 40) TAGCTGGGATTACAGGCGCCCACCACCACTC 1 chr1_KI270765v1_alt:1618 ( 7) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr2:91724611-91724658 ( 9) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr2:89650439-89650484 ( 9) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr1:144651329-144651379 ( 7) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr1:144315002-144315052 ( 14) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr1:143489358-143489403 ( 9) TAGCTGGGATTACAGGCACACACCACCACAC 1 chr16:87940803-87941113 ( 35) TAGCTGGGATTACAGGCGCCCGCCACCATGC 1 chr6:153576209-153576508 ( 42) TAGCTGGGATTACAGGCGCCCGCCATCACGC 1 chr10:103179498-10317955 ( 7) TAGCTGGGATTACAGGTGCACACCACCATGC 1 chr16:24182927-24183125 ( 9) TAGCTGGGACTACAGGTGCCCATCACCACGC 1 chr16:12822695-12822744 ( 11) TAGCTGGGATTACAGGCACTCACCACCACGT 1 chr15:78506568-78506605 ( 2) TAGTTGGGATTACAGGGGCCCACCACCACGC 1 chr11:83231898-83231940 ( 10) TAGCTGGGATTACAGGCACACACCATCATGC 1 chr7:99368655-99368725 ( 15) TAGCTGGGATTACAGGCGTATACCACCACGC 1 chr11:45004628-45004696 ( 14) TTGCTGGGATTACAGGCACTCACCACCACAC 1 chr4:102224753-102224927 ( 61) TAGCTGGGACTATAAGCGCCCACCACCACAC 1 chr2:79527350-79527634 ( 62) TAGCTGAGATTACAGGTGCCAACCACCAGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 11116 bayes= 7.78999 E= 2.2e-587 -1229 -1229 -1229 212 209 -1229 -1229 -352 -1229 -1229 189 -1229 -1229 186 -1229 -352 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -252 -1229 183 -1229 -1229 -1229 189 -1229 212 -1229 -1229 -1229 -1229 33 -1229 152 -1229 -1229 -1229 212 212 -1229 -1229 -1229 -1229 186 -1229 -352 212 -1229 -1229 -1229 -352 -1229 186 -1229 -1229 -1229 189 -1229 -1229 167 -375 -94 6 -1229 149 -1229 -1229 186 -1229 -352 -35 153 -1229 -252 -352 180 -1229 -252 200 -1229 -175 -1229 -1229 186 -1229 -352 -1229 189 -1229 -1229 212 -1229 -1229 -1229 -1229 183 -1229 -252 -1229 189 -1229 -1229 212 -1229 -1229 -1229 -1229 177 -375 -194 -35 -1229 157 -352 -1229 186 -1229 -352 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 50 E= 2.2e-587 0.000000 0.000000 0.000000 1.000000 0.980000 0.000000 0.000000 0.020000 0.000000 0.000000 1.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.040000 0.000000 0.960000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.340000 0.000000 0.660000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 0.020000 0.000000 0.980000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.860000 0.020000 0.120000 0.240000 0.000000 0.760000 0.000000 0.000000 0.980000 0.000000 0.020000 0.180000 0.780000 0.000000 0.040000 0.020000 0.940000 0.000000 0.040000 0.920000 0.000000 0.080000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.920000 0.020000 0.060000 0.180000 0.000000 0.800000 0.020000 0.000000 0.980000 0.000000 0.020000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGAYTACAGGCGCCCACCACCACGC MEME-5 regular expression -------------------------------------------------------------------------------- TAGCTGGGA[TC]TACAGGC[GA]CCCACCACCACGC -------------------------------------------------------------------------------- Time 175.60 secs. ******************************************************************************** ******************************************************************************** MOTIF TTCTCCTGCCTCAGCCTCCCRA MEME-6 width = 22 sites = 50 llr = 1265 E-value = 6.2e-338 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 Description -------------------------------------------------------------------------------- Simplified A :::1:::1::::7:::::::3a pos.-specific C :3a:aa1:a9:8::aa:aa9:: probability G :::1:::9::::3a::::::7: matrix T a7:8::91::a1::::a::1:: bits 2.1 * * * 1.9 * * ** * * ** * * 1.7 * * ** * * ****** * 1.5 * * *** *** ******* * Relative 1.3 *** **************** * Entropy 1.1 ********************** (36.5 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TTCTCCTGCCTCAGCCTCCCGA consensus C G A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr14_KI270847v1_alt:574 + 5 8.57e-14 gcca ttctcctgcctcagcctcccga gtagctggga chr20:38955176-38955488 - 68 8.57e-14 GTTCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr19:36886705-36887013 - 76 8.57e-14 CCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr18:29952436-29952738 + 8 8.57e-14 catgcca ttctcctgcctcagcctcccga gtagctggga chr17:82471511-82471807 - 74 8.57e-14 TGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr16:70503595-70503893 + 6 8.57e-14 tgcca ttctcctgcctcagcctcccga gtagctggga chr15:45099005-45099309 + 9 8.57e-14 tcatgcca ttctcctgcctcagcctcccga gtagctggga chr14:93459674-93459969 + 5 8.57e-14 gcca ttctcctgcctcagcctcccga gtagctggga chr13:29973258-29973556 + 6 8.57e-14 tgcca ttctcctgcctcagcctcccga gtagctggga chr12:31968445-31968747 + 8 8.57e-14 catgcca ttctcctgcctcagcctcccga gtagctggga chr11:130468483-13046878 - 71 8.57e-14 TCACGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr11:95287194-95287506 + 7 8.57e-14 atgcca ttctcctgcctcagcctcccga gtagctggga chr8:119811524-119811828 - 71 8.57e-14 TCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr7:133581476-133581782 - 70 8.57e-14 TTCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr7:120959630-120959944 + 14 8.57e-14 gttcatgcca ttctcctgcctcagcctcccga gtagctggga chr7:27283030-27283334 - 70 8.57e-14 TTCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr6:153576209-153576508 - 74 8.57e-14 TGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr6:139657737-139658060 + 19 8.57e-14 gttcatgcca ttctcctgcctcagcctcccga gtagctggga chr6:100086555-100086863 - 69 8.57e-14 GTTCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr6:94471871-94472170 - 71 8.57e-14 TCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr5:175697181-175697480 - 74 8.57e-14 TGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr5:28356843-28357123 + 18 8.57e-14 gttcatgcca ttctcctgcctcagcctcccga gtagctggga chr4:100467396-100467701 - 75 8.57e-14 GCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:179760282-179760582 + 7 8.57e-14 atgcca ttctcctgcctcagcctcccga gtagctggga chr3:100587918-100588229 - 68 8.57e-14 GTTCATGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr3:83327863-83328166 - 72 8.57e-14 CACGCCA TTCTCCTGCCTCAGCCTCCCGA GTAGCTGGGA chr2:170135513-170135811 + 6 8.57e-14 tgcca ttctcctgcctcagcctcccga gtagctggga chr1:214449005-214449305 + 7 8.57e-14 atgcca ttctcctgcctcagcctcccga gtagctggga chr1:190646539-190646850 + 13 8.57e-14 gttcatgcca ttctcctgcctcagcctcccga gtagctggga chr10:118219692-11821999 - 72 1.59e-13 CATGCCA TTCTCCTGCCTCAGCCTCCCAA GTAGCTGGGA chr7:71156718-71156882 + 75 4.46e-13 gctcaagtga tcctcctgcctcagcctcccaa agcg chr8:21150142-21150447 - 71 2.44e-12 TCATGCCA TTCTCCTGCTTCAGCCTCCCGA GTAGCTGGGA chr7:123324490-123324552 - 36 5.06e-12 ATGCC ATCTCCTGCCTCAGCCTCCCGA GTAGTTGGGA chr16:22696236-22696298 + 2 6.66e-12 a ttctcctgcatcagcctcccaa gtagctggaa chr13:45307617-45307653 - 13 7.52e-12 CA TCCTCCTGCCTTGGCCTCCCAA GTAGCTGGGA chr11:83737671-83737832 - 9 2.60e-11 GACCTCGTTA TCCACCTGCCTTGGCCTCCCAA AGTGCTGG chr11:65519458-65519584 + 54 2.60e-11 gaccttgtga tccacctgccttggcctcccaa agtgatggga chr11:65519377-65519430 + 2 2.72e-11 a ttctcctgactcagcctcctga gtagctggga chr17:74122798-74122948 + 69 2.89e-11 gaccttgtga tccacccgcctcggcctcccaa agtgctggga chr14:86134945-86135099 + 68 3.03e-11 gacttcgtga tccgcctgcttcagcctcccaa agtgctggga chr17:72796742-72796800 + 5 4.05e-11 gcaa ttctcccacctcagcctcctga gtagctggga chr6:23069655-23069806 + 67 4.25e-11 aacctcatga tcctcccacctcggcctcccaa agtgctggga chr8:52858137-52858312 + 79 7.68e-11 gacctcatga tccacctgcctcggtctcccaa chr17:2518019-2518174 + 69 8.88e-11 gaccttgtga tccgcctgcctgggcctcccaa agtgctggga chr22:34640392-34640566 + 78 9.80e-11 gacctcgtga tccaccttccttggcctcccaa a chr5:80205785-80205913 - 25 1.10e-10 GACCTCACGA TCCGCCTGCCTTGGCCTCCTAA AGTGCTGGGA chr12:86342583-86342738 + 69 1.17e-10 gatctcgtga tccgcccacctcggcctcccaa agtgctggga chr1:117166472-117166648 - 1 1.83e-10 GACCTTGTGA TCCACCCGCCTCGGCCTTCCAA chrX_KI270913v1_alt:1757 + 70 2.43e-10 gacctcgtga tccgccctccttggcctcccaa agcgctggg chrX_KI270880v1_alt:1866 + 70 2.43e-10 gacctcgtga tccgccctccttggcctcccaa agcgctggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14_KI270847v1_alt:574 8.6e-14 4_[+6]_74 chr20:38955176-38955488 8.6e-14 67_[-6]_11 chr19:36886705-36887013 8.6e-14 75_[-6]_3 chr18:29952436-29952738 8.6e-14 7_[+6]_71 chr17:82471511-82471807 8.6e-14 73_[-6]_5 chr16:70503595-70503893 8.6e-14 5_[+6]_73 chr15:45099005-45099309 8.6e-14 8_[+6]_70 chr14:93459674-93459969 8.6e-14 4_[+6]_74 chr13:29973258-29973556 8.6e-14 5_[+6]_73 chr12:31968445-31968747 8.6e-14 7_[+6]_71 chr11:130468483-13046878 8.6e-14 70_[-6]_8 chr11:95287194-95287506 8.6e-14 6_[+6]_72 chr8:119811524-119811828 8.6e-14 70_[-6]_8 chr7:133581476-133581782 8.6e-14 69_[-6]_9 chr7:120959630-120959944 8.6e-14 13_[+6]_65 chr7:27283030-27283334 8.6e-14 69_[-6]_9 chr6:153576209-153576508 8.6e-14 73_[-6]_5 chr6:139657737-139658060 8.6e-14 18_[+6]_60 chr6:100086555-100086863 8.6e-14 68_[-6]_10 chr6:94471871-94472170 8.6e-14 70_[-6]_8 chr5:175697181-175697480 8.6e-14 73_[-6]_5 chr5:28356843-28357123 8.6e-14 17_[+6]_61 chr4:100467396-100467701 8.6e-14 74_[-6]_4 chr3:179760282-179760582 8.6e-14 6_[+6]_72 chr3:100587918-100588229 8.6e-14 67_[-6]_11 chr3:83327863-83328166 8.6e-14 71_[-6]_7 chr2:170135513-170135811 8.6e-14 5_[+6]_73 chr1:214449005-214449305 8.6e-14 6_[+6]_72 chr1:190646539-190646850 8.6e-14 12_[+6]_66 chr10:118219692-11821999 1.6e-13 71_[-6]_7 chr7:71156718-71156882 4.5e-13 74_[+6]_4 chr8:21150142-21150447 2.4e-12 70_[-6]_8 chr7:123324490-123324552 5.1e-12 35_[-6]_5 chr16:22696236-22696298 6.7e-12 1_[+6]_39 chr13:45307617-45307653 7.5e-12 12_[-6]_2 chr11:83737671-83737832 2.6e-11 8_[-6]_70 chr11:65519458-65519584 2.6e-11 53_[+6]_25 chr11:65519377-65519430 2.7e-11 1_[+6]_30 chr17:74122798-74122948 2.9e-11 68_[+6]_10 chr14:86134945-86135099 3e-11 67_[+6]_11 chr17:72796742-72796800 4.1e-11 4_[+6]_32 chr6:23069655-23069806 4.3e-11 66_[+6]_12 chr8:52858137-52858312 7.7e-11 78_[+6] chr17:2518019-2518174 8.9e-11 68_[+6]_10 chr22:34640392-34640566 9.8e-11 77_[+6]_1 chr5:80205785-80205913 1.1e-10 24_[-6]_54 chr12:86342583-86342738 1.2e-10 68_[+6]_10 chr1:117166472-117166648 1.8e-10 [-6]_78 chrX_KI270913v1_alt:1757 2.4e-10 69_[+6]_9 chrX_KI270880v1_alt:1866 2.4e-10 69_[+6]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTCTCCTGCCTCAGCCTCCCRA width=22 seqs=50 chr14_KI270847v1_alt:574 ( 5) TTCTCCTGCCTCAGCCTCCCGA 1 chr20:38955176-38955488 ( 68) TTCTCCTGCCTCAGCCTCCCGA 1 chr19:36886705-36887013 ( 76) TTCTCCTGCCTCAGCCTCCCGA 1 chr18:29952436-29952738 ( 8) TTCTCCTGCCTCAGCCTCCCGA 1 chr17:82471511-82471807 ( 74) TTCTCCTGCCTCAGCCTCCCGA 1 chr16:70503595-70503893 ( 6) TTCTCCTGCCTCAGCCTCCCGA 1 chr15:45099005-45099309 ( 9) TTCTCCTGCCTCAGCCTCCCGA 1 chr14:93459674-93459969 ( 5) TTCTCCTGCCTCAGCCTCCCGA 1 chr13:29973258-29973556 ( 6) TTCTCCTGCCTCAGCCTCCCGA 1 chr12:31968445-31968747 ( 8) TTCTCCTGCCTCAGCCTCCCGA 1 chr11:130468483-13046878 ( 71) TTCTCCTGCCTCAGCCTCCCGA 1 chr11:95287194-95287506 ( 7) TTCTCCTGCCTCAGCCTCCCGA 1 chr8:119811524-119811828 ( 71) TTCTCCTGCCTCAGCCTCCCGA 1 chr7:133581476-133581782 ( 70) TTCTCCTGCCTCAGCCTCCCGA 1 chr7:120959630-120959944 ( 14) TTCTCCTGCCTCAGCCTCCCGA 1 chr7:27283030-27283334 ( 70) TTCTCCTGCCTCAGCCTCCCGA 1 chr6:153576209-153576508 ( 74) TTCTCCTGCCTCAGCCTCCCGA 1 chr6:139657737-139658060 ( 19) TTCTCCTGCCTCAGCCTCCCGA 1 chr6:100086555-100086863 ( 69) TTCTCCTGCCTCAGCCTCCCGA 1 chr6:94471871-94472170 ( 71) TTCTCCTGCCTCAGCCTCCCGA 1 chr5:175697181-175697480 ( 74) TTCTCCTGCCTCAGCCTCCCGA 1 chr5:28356843-28357123 ( 18) TTCTCCTGCCTCAGCCTCCCGA 1 chr4:100467396-100467701 ( 75) TTCTCCTGCCTCAGCCTCCCGA 1 chr3:179760282-179760582 ( 7) TTCTCCTGCCTCAGCCTCCCGA 1 chr3:100587918-100588229 ( 68) TTCTCCTGCCTCAGCCTCCCGA 1 chr3:83327863-83328166 ( 72) TTCTCCTGCCTCAGCCTCCCGA 1 chr2:170135513-170135811 ( 6) TTCTCCTGCCTCAGCCTCCCGA 1 chr1:214449005-214449305 ( 7) TTCTCCTGCCTCAGCCTCCCGA 1 chr1:190646539-190646850 ( 13) TTCTCCTGCCTCAGCCTCCCGA 1 chr10:118219692-11821999 ( 72) TTCTCCTGCCTCAGCCTCCCAA 1 chr7:71156718-71156882 ( 75) TCCTCCTGCCTCAGCCTCCCAA 1 chr8:21150142-21150447 ( 71) TTCTCCTGCTTCAGCCTCCCGA 1 chr7:123324490-123324552 ( 36) ATCTCCTGCCTCAGCCTCCCGA 1 chr16:22696236-22696298 ( 2) TTCTCCTGCATCAGCCTCCCAA 1 chr13:45307617-45307653 ( 13) TCCTCCTGCCTTGGCCTCCCAA 1 chr11:83737671-83737832 ( 9) TCCACCTGCCTTGGCCTCCCAA 1 chr11:65519458-65519584 ( 54) TCCACCTGCCTTGGCCTCCCAA 1 chr11:65519377-65519430 ( 2) TTCTCCTGACTCAGCCTCCTGA 1 chr17:74122798-74122948 ( 69) TCCACCCGCCTCGGCCTCCCAA 1 chr14:86134945-86135099 ( 68) TCCGCCTGCTTCAGCCTCCCAA 1 chr17:72796742-72796800 ( 5) TTCTCCCACCTCAGCCTCCTGA 1 chr6:23069655-23069806 ( 67) TCCTCCCACCTCGGCCTCCCAA 1 chr8:52858137-52858312 ( 79) TCCACCTGCCTCGGTCTCCCAA 1 chr17:2518019-2518174 ( 69) TCCGCCTGCCTGGGCCTCCCAA 1 chr22:34640392-34640566 ( 78) TCCACCTTCCTTGGCCTCCCAA 1 chr5:80205785-80205913 ( 25) TCCGCCTGCCTTGGCCTCCTAA 1 chr12:86342583-86342738 ( 69) TCCGCCCACCTCGGCCTCCCAA 1 chr1:117166472-117166648 ( 1) TCCACCCGCCTCGGCCTTCCAA 1 chrX_KI270913v1_alt:1757 ( 70) TCCGCCCTCCTTGGCCTCCCAA 1 chrX_KI270880v1_alt:1866 ( 70) TCCGCCCTCCTTGGCCTCCCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 13087 bayes= 8.51811 E= 6.2e-338 -352 -1229 -1229 209 -1229 15 -1229 161 -1229 189 -1229 -1229 -94 -1229 -117 172 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 -95 -1229 190 -194 -1229 170 -194 -352 186 -1229 -1229 -352 180 -1229 -252 -1229 -1229 -1229 212 -1229 164 -375 -72 169 -1229 -5 -1229 -1229 -1229 189 -1229 -1229 186 -1229 -352 -1229 189 -1229 -1229 -1229 -1229 -1229 212 -1229 186 -1229 -352 -1229 189 -1229 -1229 -1229 180 -1229 -194 56 -1229 129 -1229 212 -1229 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 50 E= 6.2e-338 0.020000 0.000000 0.000000 0.980000 0.000000 0.300000 0.000000 0.700000 0.000000 1.000000 0.000000 0.000000 0.120000 0.000000 0.120000 0.760000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.140000 0.000000 0.860000 0.060000 0.000000 0.880000 0.060000 0.020000 0.980000 0.000000 0.000000 0.020000 0.940000 0.000000 0.040000 0.000000 0.000000 0.000000 1.000000 0.000000 0.840000 0.020000 0.140000 0.740000 0.000000 0.260000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.980000 0.000000 0.020000 0.000000 1.000000 0.000000 0.000000 0.000000 0.940000 0.000000 0.060000 0.340000 0.000000 0.660000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTCCTGCCTCAGCCTCCCRA MEME-6 regular expression -------------------------------------------------------------------------------- T[TC]CTCCTGCCTC[AG]GCCTCCC[GA]A -------------------------------------------------------------------------------- Time 201.49 secs. ******************************************************************************** ******************************************************************************** MOTIF TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 width = 41 sites = 25 llr = 1230 E-value = 3.6e-361 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 Description -------------------------------------------------------------------------------- Simplified A ::9:::a::a:::::::1a::1::::a::::2::a:::2:: pos.-specific C ::::9a::::::::a:8:::a:a91::aa:8:::::a6:aa probability G ::1a:::aa::aa::::8:::::::a:::::8:a::::8:: matrix T aa::1:::::a::a:a2::a:9:19::::a1:a::a:4::: bits 2.1 ** * ** * * 1.9 ** *** ** *** *** * ** ***** 1.7 **** *********** ***** ****** ***** ** 1.5 **************** ************ ***** ** Relative 1.3 ***************** ************ ***** ** Entropy 1.1 ***************************************** (71.0 bits) 0.8 ***************************************** 0.6 ***************************************** 0.4 ***************************************** 0.2 ***************************************** 0.0 ----------------------------------------- Multilevel TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCC consensus T A TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------------------- chrX:111616071-111616224 + 33 3.18e-25 tttcaccgtg ttagccaggatggtctcgatctcctgacctcgtgatccgcc cgccttggcc chr9:6659993-6660190 + 55 3.18e-25 tttcaccgtg ttagccaggatggtctcgatctcctgacctcgtgatccgcc cgcct chrX:83712554-83712752 - 6 5.88e-25 TTTCACCGTG TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCC CGCCT chr2:131172009-131172174 + 38 5.88e-25 tttcaccgca ttagccaggatggtctcgatctcctgacctcgtgatctgcc ccgcctcggc chr17:7958509-7958659 + 32 1.13e-24 tttcagtgtg ttagccaggatggtctcgatctcctgacctcatgatccgcc cgcctggtcc chr8:51184877-51185071 + 54 3.33e-24 tttcatcatg ttagccaggatggtctcaatctcctgacctcgtgatctgcc cgcctc chr5:156463181-156463341 + 36 3.33e-24 tttcactgtg ttagccaggatggtctcgatctcctgaccttgtgatctgcc ttccttggcc chr7:131116023-131116176 - 29 5.38e-24 TTTCACCATG TTAGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCC CGCCTCGGCA chrX:47474898-47475082 - 13 8.27e-24 TTTCACCATG TTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACC CGCCTCGGCC chr1:170905405-170905608 - 4 1.34e-23 TTTCACCGTG TTAGCCAGGATGGTCTTGATCTCCTGACCTCATGATCCACC TGT chr13:80918769-80918975 + 59 2.09e-23 tttcaccgtg ttagccaggatggcctcgatctcctgacctcgtgatccgcc c chr13:77069340-77069538 - 6 3.77e-23 TTTCACCATA TTAGCCAGGATGGTCTCGATCTCCTGATCTCATGATCCGCC CGCCT chr19:15944245-15944399 + 45 5.98e-23 tttcaccatg ttatccaggatggtcttgatctcctgacctcgtgatctgcc cacctcagcc chr9:34117291-34117449 + 35 6.29e-23 tttcaccgtg ttagccaggatggtcttgatctcctcacctcgtgatctgcc tgcctcggcc chrY:503249-503405 + 35 7.90e-23 tttcaccgtg ttggccaggatggtctcgatctcttgacctcgtgatccgcc ctccttggcc chrX:503249-503405 + 35 7.90e-23 tttcaccgtg ttggccaggatggtctcgatctcttgacctcgtgatccgcc ctccttggcc chr12:49722814-49722967 - 29 1.12e-22 TTTCACCATG TTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACT CGCCTCGGCC chr19:50386910-50387096 - 12 1.54e-22 TTTCACCGTG TTAGCCAGGATGGTCTTGGTCTCCTGACCTCATGATCTGCC CGCCTCGGCC chr9:67392692-67392896 + 58 2.33e-22 tttcaccgtg ttagccaggatggtctcgatcacccgacctcatgatctgcc gg chr9:38971031-38971235 - 3 2.33e-22 TTTCACCGTG TTAGCCAGGATGGTCTCGATCACCCGACCTCATGATCTGCC GG chr1:55876052-55876207 - 28 1.28e-21 TTTCACCGTG TTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGGTCCGCC CACCTCAGCA chrY:7017041-7017199 - 25 2.79e-21 TTTCACCATG TTAGTCAGAATGGTCTCGATCTCCTGACCTGGTGATCCACC CACCTCGGCT chr3:112787770-112787974 + 58 3.18e-21 tttcaccatg ttagccaggatggtctcgagctcctgaccctgtgatccacc tg chr3:178041064-178041205 - 16 6.04e-21 TTTCACCGTG TTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGACCCATC CGCCTCAGCC chr12:123215955-12321610 - 29 1.15e-20 TTTCACCGTG TTAGCCAGGATAATCCCAATCTCCTGACCTCGTGATCTGCC CGCCTTGGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:111616071-111616224 3.2e-25 32_[+7]_27 chr9:6659993-6660190 3.2e-25 54_[+7]_5 chrX:83712554-83712752 5.9e-25 5_[-7]_54 chr2:131172009-131172174 5.9e-25 37_[+7]_22 chr17:7958509-7958659 1.1e-24 31_[+7]_28 chr8:51184877-51185071 3.3e-24 53_[+7]_6 chr5:156463181-156463341 3.3e-24 35_[+7]_24 chr7:131116023-131116176 5.4e-24 28_[-7]_31 chrX:47474898-47475082 8.3e-24 12_[-7]_47 chr1:170905405-170905608 1.3e-23 3_[-7]_56 chr13:80918769-80918975 2.1e-23 58_[+7]_1 chr13:77069340-77069538 3.8e-23 5_[-7]_54 chr19:15944245-15944399 6e-23 44_[+7]_15 chr9:34117291-34117449 6.3e-23 34_[+7]_25 chrY:503249-503405 7.9e-23 34_[+7]_25 chrX:503249-503405 7.9e-23 34_[+7]_25 chr12:49722814-49722967 1.1e-22 28_[-7]_31 chr19:50386910-50387096 1.5e-22 11_[-7]_48 chr9:67392692-67392896 2.3e-22 57_[+7]_2 chr9:38971031-38971235 2.3e-22 2_[-7]_57 chr1:55876052-55876207 1.3e-21 27_[-7]_32 chrY:7017041-7017199 2.8e-21 24_[-7]_35 chr3:112787770-112787974 3.2e-21 57_[+7]_2 chr3:178041064-178041205 6e-21 15_[-7]_44 chr12:123215955-12321610 1.2e-20 28_[-7]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC width=41 seqs=25 chrX:111616071-111616224 ( 33) TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCC 1 chr9:6659993-6660190 ( 55) TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCC 1 chrX:83712554-83712752 ( 6) TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCC 1 chr2:131172009-131172174 ( 38) TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCC 1 chr17:7958509-7958659 ( 32) TTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCC 1 chr8:51184877-51185071 ( 54) TTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCTGCC 1 chr5:156463181-156463341 ( 36) TTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCC 1 chr7:131116023-131116176 ( 29) TTAGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCC 1 chrX:47474898-47475082 ( 13) TTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACC 1 chr1:170905405-170905608 ( 4) TTAGCCAGGATGGTCTTGATCTCCTGACCTCATGATCCACC 1 chr13:80918769-80918975 ( 59) TTAGCCAGGATGGCCTCGATCTCCTGACCTCGTGATCCGCC 1 chr13:77069340-77069538 ( 6) TTAGCCAGGATGGTCTCGATCTCCTGATCTCATGATCCGCC 1 chr19:15944245-15944399 ( 45) TTATCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCC 1 chr9:34117291-34117449 ( 35) TTAGCCAGGATGGTCTTGATCTCCTCACCTCGTGATCTGCC 1 chrY:503249-503405 ( 35) TTGGCCAGGATGGTCTCGATCTCTTGACCTCGTGATCCGCC 1 chrX:503249-503405 ( 35) TTGGCCAGGATGGTCTCGATCTCTTGACCTCGTGATCCGCC 1 chr12:49722814-49722967 ( 29) TTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACT 1 chr19:50386910-50387096 ( 12) TTAGCCAGGATGGTCTTGGTCTCCTGACCTCATGATCTGCC 1 chr9:67392692-67392896 ( 58) TTAGCCAGGATGGTCTCGATCACCCGACCTCATGATCTGCC 1 chr9:38971031-38971235 ( 3) TTAGCCAGGATGGTCTCGATCACCCGACCTCATGATCTGCC 1 chr1:55876052-55876207 ( 28) TTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGGTCCGCC 1 chrY:7017041-7017199 ( 25) TTAGTCAGAATGGTCTCGATCTCCTGACCTGGTGATCCACC 1 chr3:112787770-112787974 ( 58) TTAGCCAGGATGGTCTCGAGCTCCTGACCCTGTGATCCACC 1 chr3:178041064-178041205 ( 16) TTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGACCCATC 1 chr12:123215955-12321610 ( 29) TTAGCCAGGATAATCCCAATCTCCTGACCTCGTGATCTGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 41 n= 8926 bayes= 8.18338 E= 3.6e-361 -1129 -1129 -1129 212 -1129 -1129 -1129 212 200 -1129 -175 -1129 -1129 -1129 183 -252 -1129 177 -1129 -152 -1129 189 -1129 -1129 212 -1129 -1129 -1129 -1129 -1129 189 -1129 -252 -1129 183 -1129 212 -1129 -1129 -1129 -1129 -1129 -1129 212 -252 -1129 183 -1129 -252 -1129 183 -1129 -1129 -275 -1129 206 -1129 189 -1129 -1129 -1129 -275 -1129 206 -1129 157 -1129 -20 -94 -275 164 -1129 206 -1129 -275 -1129 -1129 -1129 -275 206 -1129 189 -1129 -1129 -152 -1129 -1129 200 -1129 183 -1129 -252 -1129 177 -1129 -152 -1129 -175 -1129 200 -1129 -275 183 -1129 212 -1129 -1129 -1129 -1129 183 -1129 -252 -1129 189 -1129 -1129 -1129 -275 -1129 206 -1129 164 -275 -94 6 -1129 149 -1129 -1129 -1129 -1129 212 -1129 -1129 189 -1129 206 -1129 -275 -1129 -1129 -275 -1129 206 -1129 189 -1129 -1129 -1129 105 -1129 94 6 -1129 149 -1129 -1129 183 -1129 -252 -1129 183 -1129 -252 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 41 nsites= 25 E= 3.6e-361 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.920000 0.000000 0.080000 0.000000 0.000000 0.000000 0.960000 0.040000 0.000000 0.920000 0.000000 0.080000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.040000 0.000000 0.960000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.040000 0.000000 0.960000 0.000000 0.040000 0.000000 0.960000 0.000000 0.000000 0.040000 0.000000 0.960000 0.000000 1.000000 0.000000 0.000000 0.000000 0.040000 0.000000 0.960000 0.000000 0.800000 0.000000 0.200000 0.120000 0.040000 0.840000 0.000000 0.960000 0.000000 0.040000 0.000000 0.000000 0.000000 0.040000 0.960000 0.000000 1.000000 0.000000 0.000000 0.080000 0.000000 0.000000 0.920000 0.000000 0.960000 0.000000 0.040000 0.000000 0.920000 0.000000 0.080000 0.000000 0.080000 0.000000 0.920000 0.000000 0.040000 0.960000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 1.000000 0.000000 0.000000 0.000000 0.040000 0.000000 0.960000 0.000000 0.840000 0.040000 0.120000 0.240000 0.000000 0.760000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.960000 0.000000 0.040000 0.000000 0.000000 0.040000 0.000000 0.960000 0.000000 1.000000 0.000000 0.000000 0.000000 0.560000 0.000000 0.440000 0.240000 0.000000 0.760000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 0.960000 0.000000 0.040000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCYGCC MEME-7 regular expression -------------------------------------------------------------------------------- TTAGCCAGGATGGTCT[CT]GATCTCCTGACCTC[GA]TGATC[CT][GA]CC -------------------------------------------------------------------------------- Time 225.22 secs. ******************************************************************************** ******************************************************************************** MOTIF TGARACYCCGTCTCWAMWAAAA MEME-8 width = 22 sites = 48 llr = 1070 E-value = 1.5e-258 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 Description -------------------------------------------------------------------------------- Simplified A :1a4a::::2::::5966a99a pos.-specific C :::::a597::9:91:41:::: probability G :9:5:::::8:::1::::::1: matrix T 9:::::413:a:a:5::4:::: bits 2.1 * * * * 1.9 * * * * * * 1.7 * * ** * * * * ** 1.5 * * ** * * * * **** Relative 1.3 *** ** * **** * **** Entropy 1.1 *** ** * ***** ** **** (32.2 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TGAGACCCCGTCTCTAAAAAAA consensus A T TA A CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr16:13852959-13852988 + 4 2.64e-13 gag tgagactccgtctcaaaaaaaa aaaa chr6:164662624-164662736 + 63 2.64e-13 ggcgaaagag tgagactccgtctcaaaaaaaa aaaaaaaaaa chr6:101255096-101255140 + 11 2.64e-13 tgggcaatga tgagactccgtctcaaaaaaaa aaaaaaaaaa chr5:73920549-73920670 - 1 2.64e-13 GGCGAAAGAG TGAGACTCCGTCTCAAAAAAAA chr4:158494157-158494192 + 2 2.64e-13 g tgagactccgtctcaaaaaaaa aaaaaaaaaa chr3:54256740-54256776 + 4 2.64e-13 gag tgagactccgtctcaaaaaaaa aaaaaaaaaa chr1:107851102-107851193 + 56 2.64e-13 ggagaaagag tgagactccgtctcaaaaaaaa aaaaaaaaaa chr20:16598141-16598177 + 13 1.06e-12 ggtgaaacag tgagactctgtctcaaaaaaaa aa chr1:151905406-151905446 - 4 1.06e-12 AGGGTGAGAG TGAGACTCTGTCTCAAAAAAAA AAA chr17:2518019-2518174 - 7 1.22e-12 GCTAACACGG TGAAACCCCGTCTCTACTAAAA ATACAA chr12:123215955-12321610 + 75 1.22e-12 gctaacacgg tgaaaccccgtctctactaaaa atac chr12:86342583-86342738 - 7 1.22e-12 GCTAACATGG TGAAACCCCGTCTCTACTAAAA ATACAA chr12:49722814-49722967 + 75 1.22e-12 gctaacatgg tgaaaccccgtctctactaaaa acaa chrX:111616071-111616224 - 6 1.22e-12 GCTAACACGG TGAAACCCCGTCTCTACTAAAA ATACA chr20:43661048-43661123 + 47 1.97e-12 caaaccagag tgagaccccatctctaaaaaaa aaaaaaa chr15:50312192-50312235 + 18 2.08e-12 tgggcaagag tgagactccatctcaaaaaaaa aaaa chr11:9431465-9431520 - 6 2.08e-12 GGTGACAGAG TGAGACTCCATCTCAAAAAAAA AAAAA chr9:34117291-34117449 - 8 2.22e-12 GCTAACACGG TGAAACCCTGTCTCTACTAAAA ATACAAA chr6:23069655-23069806 - 5 3.16e-12 GCTAACACAG TGAAACCCCATCTCTACTAAAA ATAC chr3:191048912-191048947 - 11 5.69e-12 GAG TGAGACTTCGTCTCAAAAAAAA AAAAAAAAAA chr3:113913410-113913448 + 5 6.64e-12 agag tgagactctgtctccaaaaaaa aaaaaaaaaa chr19_KI270865v1_alt:207 + 12 7.69e-12 agcgagagag tgagactccgtctcaaaaaaga aaaaaataaa chr19:1128113-1128156 + 12 7.69e-12 agcgagagag tgagactccgtctcaaaaaaga aaaaaataaa chr20:49735059-49735100 - 6 1.07e-11 AGCCTAAGAG TAAGACCCTGTCTCAAAAAAAA AAAAA chr2:5351736-5351774 + 12 1.07e-11 ggtgaaagag taagactctgtctcaaaaaaaa aaaaa chr21:33222105-33222166 - 13 2.87e-11 GCAATAAGAG TGAGACTCTGACTCAAAAAAAA AAAAAAAAAA chr17:64491446-64491517 + 50 4.10e-11 ggcaaaagag tgagactatgtctctaaaaaaa chr7:131116023-131116176 + 75 4.10e-11 actaacatgg tgaaaccccatctccactaaaa agac chr17:74122798-74122948 - 7 5.06e-11 GCTAACACGG TTAAACCCCGTCTCTACTAAAA ATACAA chr5:17872575-17872741 - 7 6.43e-11 GCTAACATGG TGAAACCCCGTCTCTACTAAAT ATACAA chrX_KI270913v1_alt:1757 - 8 7.31e-11 GCCAACACGG TGAAACCCCGTCTGTACCAAAA ATACAAA chrX_KI270880v1_alt:1866 - 8 7.31e-11 GCCAACACGG TGAAACCCCGTCTGTACCAAAA ATACAAA chrY:503249-503405 - 8 7.31e-11 GCCAACACGG TGAAACCCCGTCTGTACCAAAA ATACAAA chrX:503249-503405 - 8 7.31e-11 GCCAACACGG TGAAACCCCGTCTGTACCAAAA ATACAAA chr10:53015078-53015136 + 27 8.35e-11 agcaacagag tgagaccccatctcaaaaataa ataaataaaa chr5:156463181-156463341 - 9 9.36e-11 GCTAACACAG TGAAACCCCATCTCTCCTAAAA AAAATACA chr2:131172009-131172174 - 11 1.42e-10 GCTAATGCGG TGAAACCCCATCTCTACTAGAA AAAATACAAA chr1:151855091-151855147 + 30 3.06e-10 ggaggccgag tgagaccttgtcttaaaaaaaa aaaaa chr1:55876052-55876207 + 75 4.43e-10 ctaacacggt gaaaaccctgtctctactaaaa atat chr17:7958509-7958659 - 5 6.28e-10 GCTAACACAC TGAAACCCCTTCTCTCCTAAAA ATAC chr1:49196782-49196826 - 11 6.78e-10 GGCAAAAGAG TGAGATCCTGTCTCAAAAACAA CAAAAACAAA chrY:7017041-7017199 + 71 7.29e-10 actaacatgg tgaaaaccagtctctactaaaa atacaaaa chr11:83737671-83737832 + 71 8.98e-10 gttaacactg tgaaaccccaattctactaaaa atagaaaa chr4:39399251-39399297 + 16 1.43e-09 tgggcaagag tgacaccctatctctgaaaaaa aaaaaaaga chr15:33001728-33001782 - 2 2.21e-09 AGCGAGGGAG TGAGACTTTGTATCAAAAAAGA A chr4:109567555-109567641 - 31 6.56e-09 CATGGTGAAA CCAAACTCGGTCTCTACTAAAA TACAAAAAAT chr7:87788327-87788393 + 36 1.61e-08 ggaaacagag tgagacactgtgtccaaaacaa agagaaaaa chr6:11172258-11172318 + 33 1.70e-08 agtgtctgag gcagactccgtttaaaaaaaaa aaaaaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:13852959-13852988 2.6e-13 3_[+8]_4 chr6:164662624-164662736 2.6e-13 62_[+8]_16 chr6:101255096-101255140 2.6e-13 10_[+8]_12 chr5:73920549-73920670 2.6e-13 [-8]_78 chr4:158494157-158494192 2.6e-13 1_[+8]_12 chr3:54256740-54256776 2.6e-13 3_[+8]_11 chr1:107851102-107851193 2.6e-13 55_[+8]_14 chr20:16598141-16598177 1.1e-12 12_[+8]_2 chr1:151905406-151905446 1.1e-12 3_[-8]_15 chr17:2518019-2518174 1.2e-12 6_[-8]_72 chr12:123215955-12321610 1.2e-12 74_[+8]_4 chr12:86342583-86342738 1.2e-12 6_[-8]_72 chr12:49722814-49722967 1.2e-12 74_[+8]_4 chrX:111616071-111616224 1.2e-12 5_[-8]_73 chr20:43661048-43661123 2e-12 46_[+8]_7 chr15:50312192-50312235 2.1e-12 17_[+8]_4 chr11:9431465-9431520 2.1e-12 5_[-8]_28 chr9:34117291-34117449 2.2e-12 7_[-8]_71 chr6:23069655-23069806 3.2e-12 4_[-8]_74 chr3:191048912-191048947 5.7e-12 10_[-8]_3 chr3:113913410-113913448 6.6e-12 4_[+8]_12 chr19_KI270865v1_alt:207 7.7e-12 11_[+8]_10 chr19:1128113-1128156 7.7e-12 11_[+8]_10 chr20:49735059-49735100 1.1e-11 5_[-8]_14 chr2:5351736-5351774 1.1e-11 11_[+8]_5 chr21:33222105-33222166 2.9e-11 12_[-8]_27 chr17:64491446-64491517 4.1e-11 49_[+8] chr7:131116023-131116176 4.1e-11 74_[+8]_4 chr17:74122798-74122948 5.1e-11 6_[-8]_72 chr5:17872575-17872741 6.4e-11 6_[-8]_72 chrX_KI270913v1_alt:1757 7.3e-11 7_[-8]_71 chrX_KI270880v1_alt:1866 7.3e-11 7_[-8]_71 chrY:503249-503405 7.3e-11 7_[-8]_71 chrX:503249-503405 7.3e-11 7_[-8]_71 chr10:53015078-53015136 8.4e-11 26_[+8]_10 chr5:156463181-156463341 9.4e-11 8_[-8]_70 chr2:131172009-131172174 1.4e-10 10_[-8]_68 chr1:151855091-151855147 3.1e-10 29_[+8]_5 chr1:55876052-55876207 4.4e-10 74_[+8]_4 chr17:7958509-7958659 6.3e-10 4_[-8]_74 chr1:49196782-49196826 6.8e-10 10_[-8]_12 chrY:7017041-7017199 7.3e-10 70_[+8]_8 chr11:83737671-83737832 9e-10 70_[+8]_8 chr4:39399251-39399297 1.4e-09 15_[+8]_9 chr15:33001728-33001782 2.2e-09 1_[-8]_31 chr4:109567555-109567641 6.6e-09 30_[-8]_34 chr7:87788327-87788393 1.6e-08 35_[+8]_9 chr6:11172258-11172318 1.7e-08 32_[+8]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGARACYCCGTCTCWAMWAAAA width=22 seqs=48 chr16:13852959-13852988 ( 4) TGAGACTCCGTCTCAAAAAAAA 1 chr6:164662624-164662736 ( 63) TGAGACTCCGTCTCAAAAAAAA 1 chr6:101255096-101255140 ( 11) TGAGACTCCGTCTCAAAAAAAA 1 chr5:73920549-73920670 ( 1) TGAGACTCCGTCTCAAAAAAAA 1 chr4:158494157-158494192 ( 2) TGAGACTCCGTCTCAAAAAAAA 1 chr3:54256740-54256776 ( 4) TGAGACTCCGTCTCAAAAAAAA 1 chr1:107851102-107851193 ( 56) TGAGACTCCGTCTCAAAAAAAA 1 chr20:16598141-16598177 ( 13) TGAGACTCTGTCTCAAAAAAAA 1 chr1:151905406-151905446 ( 4) TGAGACTCTGTCTCAAAAAAAA 1 chr17:2518019-2518174 ( 7) TGAAACCCCGTCTCTACTAAAA 1 chr12:123215955-12321610 ( 75) TGAAACCCCGTCTCTACTAAAA 1 chr12:86342583-86342738 ( 7) TGAAACCCCGTCTCTACTAAAA 1 chr12:49722814-49722967 ( 75) TGAAACCCCGTCTCTACTAAAA 1 chrX:111616071-111616224 ( 6) TGAAACCCCGTCTCTACTAAAA 1 chr20:43661048-43661123 ( 47) TGAGACCCCATCTCTAAAAAAA 1 chr15:50312192-50312235 ( 18) TGAGACTCCATCTCAAAAAAAA 1 chr11:9431465-9431520 ( 6) TGAGACTCCATCTCAAAAAAAA 1 chr9:34117291-34117449 ( 8) TGAAACCCTGTCTCTACTAAAA 1 chr6:23069655-23069806 ( 5) TGAAACCCCATCTCTACTAAAA 1 chr3:191048912-191048947 ( 11) TGAGACTTCGTCTCAAAAAAAA 1 chr3:113913410-113913448 ( 5) TGAGACTCTGTCTCCAAAAAAA 1 chr19_KI270865v1_alt:207 ( 12) TGAGACTCCGTCTCAAAAAAGA 1 chr19:1128113-1128156 ( 12) TGAGACTCCGTCTCAAAAAAGA 1 chr20:49735059-49735100 ( 6) TAAGACCCTGTCTCAAAAAAAA 1 chr2:5351736-5351774 ( 12) TAAGACTCTGTCTCAAAAAAAA 1 chr21:33222105-33222166 ( 13) TGAGACTCTGACTCAAAAAAAA 1 chr17:64491446-64491517 ( 50) TGAGACTATGTCTCTAAAAAAA 1 chr7:131116023-131116176 ( 75) TGAAACCCCATCTCCACTAAAA 1 chr17:74122798-74122948 ( 7) TTAAACCCCGTCTCTACTAAAA 1 chr5:17872575-17872741 ( 7) TGAAACCCCGTCTCTACTAAAT 1 chrX_KI270913v1_alt:1757 ( 8) TGAAACCCCGTCTGTACCAAAA 1 chrX_KI270880v1_alt:1866 ( 8) TGAAACCCCGTCTGTACCAAAA 1 chrY:503249-503405 ( 8) TGAAACCCCGTCTGTACCAAAA 1 chrX:503249-503405 ( 8) TGAAACCCCGTCTGTACCAAAA 1 chr10:53015078-53015136 ( 27) TGAGACCCCATCTCAAAAATAA 1 chr5:156463181-156463341 ( 9) TGAAACCCCATCTCTCCTAAAA 1 chr2:131172009-131172174 ( 11) TGAAACCCCATCTCTACTAGAA 1 chr1:151855091-151855147 ( 30) TGAGACCTTGTCTTAAAAAAAA 1 chr1:55876052-55876207 ( 75) GAAAACCCTGTCTCTACTAAAA 1 chr17:7958509-7958659 ( 5) TGAAACCCCTTCTCTCCTAAAA 1 chr1:49196782-49196826 ( 11) TGAGATCCTGTCTCAAAAACAA 1 chrY:7017041-7017199 ( 71) TGAAAACCAGTCTCTACTAAAA 1 chr11:83737671-83737832 ( 71) TGAAACCCCAATTCTACTAAAA 1 chr4:39399251-39399297 ( 16) TGACACCCTATCTCTGAAAAAA 1 chr15:33001728-33001782 ( 2) TGAGACTTTGTATCAAAAAAGA 1 chr4:109567555-109567641 ( 31) CCAAACTCGGTCTCTACTAAAA 1 chr7:87788327-87788393 ( 36) TGAGACACTGTGTCCAAAACAA 1 chr6:11172258-11172318 ( 33) GCAGACTCCGTTTAAAAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 13087 bayes= 8.53446 E= 1.5e-258 -1223 -369 -269 203 -188 -269 170 -346 212 -1223 -1223 -1223 93 -369 100 -1223 212 -1223 -1223 -1223 -346 183 -1223 -346 -346 100 -1223 93 -346 176 -1223 -188 -346 130 -369 34 -14 -1223 151 -346 -246 -1223 -1223 206 -346 176 -369 -246 -1223 -1223 -1223 212 -346 170 -170 -346 100 -211 -1223 106 203 -269 -369 -1223 129 70 -1223 -1223 129 -170 -1223 62 212 -1223 -1223 -1223 200 -269 -369 -346 203 -1223 -211 -1223 209 -1223 -1223 -346 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 48 E= 1.5e-258 0.000000 0.020833 0.041667 0.937500 0.062500 0.041667 0.875000 0.020833 1.000000 0.000000 0.000000 0.000000 0.437500 0.020833 0.541667 0.000000 1.000000 0.000000 0.000000 0.000000 0.020833 0.958333 0.000000 0.020833 0.020833 0.541667 0.000000 0.437500 0.020833 0.916667 0.000000 0.062500 0.020833 0.666667 0.020833 0.291667 0.208333 0.000000 0.770833 0.020833 0.041667 0.000000 0.000000 0.958333 0.020833 0.916667 0.020833 0.041667 0.000000 0.000000 0.000000 1.000000 0.020833 0.875000 0.083333 0.020833 0.458333 0.062500 0.000000 0.479167 0.937500 0.041667 0.020833 0.000000 0.562500 0.437500 0.000000 0.000000 0.562500 0.083333 0.000000 0.354167 1.000000 0.000000 0.000000 0.000000 0.916667 0.041667 0.020833 0.020833 0.937500 0.000000 0.062500 0.000000 0.979167 0.000000 0.000000 0.020833 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGARACYCCGTCTCWAMWAAAA MEME-8 regular expression -------------------------------------------------------------------------------- TGA[GA]AC[CT]C[CT][GA]TCTC[TA]A[AC][AT]AAAA -------------------------------------------------------------------------------- Time 246.28 secs. ******************************************************************************** ******************************************************************************** MOTIF CGGGCGTGGTGG MEME-9 width = 12 sites = 50 llr = 783 E-value = 1.2e-152 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 Description -------------------------------------------------------------------------------- Simplified A :1:::::::::: pos.-specific C a:::a::::::: probability G :9aa:a:aa:aa matrix T ::::::a::a:: bits 2.1 * * 1.9 * *** ****** 1.7 * ********** 1.5 ************ Relative 1.3 ************ Entropy 1.1 ************ (22.6 bits) 0.8 ************ 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CGGGCGTGGTGG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr14_KI270847v1_alt:574 - 50 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr21:18751573-18751879 - 55 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr20:22674699-22675010 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr19:36886705-36887013 + 41 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr19:14707541-14707850 - 57 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr17:67631347-67631658 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr15:45099005-45099309 - 54 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr13:112578277-11257858 + 34 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr13:80918769-80918975 - 5 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGG chr13:45983413-45983726 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr13:29973258-29973556 - 51 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr12:127553439-12755375 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr12:97854003-97854314 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr12:80190505-80190816 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr12:27501134-27501445 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr12:11105933-11106239 - 55 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chrX:68515044-68515355 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr9:26633488-26633796 - 56 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr8:119811524-119811828 + 36 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr8:70435143-70435453 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr7:27283030-27283334 + 35 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr7:15241189-15241488 + 28 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr6:105682220-105682530 + 32 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr6:94471871-94472170 + 36 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr6:80230026-80230337 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr5:175697181-175697480 + 39 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr5:156132458-156132767 - 57 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr5:120021416-120021739 - 64 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr5:38852718-38853030 - 57 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr4:179313551-179313862 + 33 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr3:180292834-180293141 + 35 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr3:150081721-150081963 + 3 1.09e-07 gc cgggcgtggtgg tgggcgcctg chr3:110355502-110355807 - 55 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr3:83327863-83328166 + 37 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr3:57631716-57632021 - 55 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr3:12984815-12985123 - 56 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr2:220874876-220875183 + 35 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr2:170135513-170135811 - 51 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr2:56622988-56623299 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr1:226701322-226701631 + 34 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr1:190646539-190646850 - 58 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr1:179675273-179675578 - 55 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr1:170905405-170905608 + 87 1.09e-07 aaaaattagc cgggcgtggtgg tg chr1:102860402-102860712 - 57 1.09e-07 AAAAATTAGC CGGGCGTGGTGG TGGGCGCCTG chr1:80013627-80013936 + 34 1.09e-07 aaaaattagc cgggcgtggtgg tgggcgcctg chr13:49666438-49666740 + 29 2.02e-07 aaaaattagc caggcgtggtgg tgggcgcctg chrX:90711468-90711748 + 17 2.02e-07 aaaaattagc caggcgtggtgg tgggcgcctg chr9:67392692-67392896 - 4 2.02e-07 AAAAATTAGC CAGGCGTGGTGG TGG chr7:123324490-123324552 + 4 2.02e-07 agc caggcgtggtgg gcacctgtaa chr12:31968445-31968747 - 53 2.94e-07 AAAAATTAGC CGGGCATGGTGG TGGGCGCCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14_KI270847v1_alt:574 1.1e-07 49_[-9]_39 chr21:18751573-18751879 1.1e-07 54_[-9]_34 chr20:22674699-22675010 1.1e-07 32_[+9]_56 chr19:36886705-36887013 1.1e-07 40_[+9]_48 chr19:14707541-14707850 1.1e-07 56_[-9]_32 chr17:67631347-67631658 1.1e-07 32_[+9]_56 chr15:45099005-45099309 1.1e-07 53_[-9]_35 chr13:112578277-11257858 1.1e-07 33_[+9]_55 chr13:80918769-80918975 1.1e-07 4_[-9]_84 chr13:45983413-45983726 1.1e-07 57_[-9]_31 chr13:29973258-29973556 1.1e-07 50_[-9]_38 chr12:127553439-12755375 1.1e-07 57_[-9]_31 chr12:97854003-97854314 1.1e-07 57_[-9]_31 chr12:80190505-80190816 1.1e-07 32_[+9]_56 chr12:27501134-27501445 1.1e-07 32_[+9]_56 chr12:11105933-11106239 1.1e-07 54_[-9]_34 chrX:68515044-68515355 1.1e-07 32_[+9]_56 chr9:26633488-26633796 1.1e-07 55_[-9]_33 chr8:119811524-119811828 1.1e-07 35_[+9]_53 chr8:70435143-70435453 1.1e-07 32_[+9]_56 chr7:27283030-27283334 1.1e-07 34_[+9]_54 chr7:15241189-15241488 1.1e-07 27_[+9]_61 chr6:105682220-105682530 1.1e-07 31_[+9]_57 chr6:94471871-94472170 1.1e-07 35_[+9]_53 chr6:80230026-80230337 1.1e-07 57_[-9]_31 chr5:175697181-175697480 1.1e-07 38_[+9]_50 chr5:156132458-156132767 1.1e-07 56_[-9]_32 chr5:120021416-120021739 1.1e-07 63_[-9]_25 chr5:38852718-38853030 1.1e-07 56_[-9]_32 chr4:179313551-179313862 1.1e-07 32_[+9]_56 chr3:180292834-180293141 1.1e-07 34_[+9]_54 chr3:150081721-150081963 1.1e-07 2_[+9]_86 chr3:110355502-110355807 1.1e-07 54_[-9]_34 chr3:83327863-83328166 1.1e-07 36_[+9]_52 chr3:57631716-57632021 1.1e-07 54_[-9]_34 chr3:12984815-12985123 1.1e-07 55_[-9]_33 chr2:220874876-220875183 1.1e-07 34_[+9]_54 chr2:170135513-170135811 1.1e-07 50_[-9]_38 chr2:56622988-56623299 1.1e-07 57_[-9]_31 chr1:226701322-226701631 1.1e-07 33_[+9]_55 chr1:190646539-190646850 1.1e-07 57_[-9]_31 chr1:179675273-179675578 1.1e-07 54_[-9]_34 chr1:170905405-170905608 1.1e-07 86_[+9]_2 chr1:102860402-102860712 1.1e-07 56_[-9]_32 chr1:80013627-80013936 1.1e-07 33_[+9]_55 chr13:49666438-49666740 2e-07 28_[+9]_60 chrX:90711468-90711748 2e-07 16_[+9]_72 chr9:67392692-67392896 2e-07 3_[-9]_85 chr7:123324490-123324552 2e-07 3_[+9]_47 chr12:31968445-31968747 2.9e-07 52_[-9]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGGGCGTGGTGG width=12 seqs=50 chr14_KI270847v1_alt:574 ( 50) CGGGCGTGGTGG 1 chr21:18751573-18751879 ( 55) CGGGCGTGGTGG 1 chr20:22674699-22675010 ( 33) CGGGCGTGGTGG 1 chr19:36886705-36887013 ( 41) CGGGCGTGGTGG 1 chr19:14707541-14707850 ( 57) CGGGCGTGGTGG 1 chr17:67631347-67631658 ( 33) CGGGCGTGGTGG 1 chr15:45099005-45099309 ( 54) CGGGCGTGGTGG 1 chr13:112578277-11257858 ( 34) CGGGCGTGGTGG 1 chr13:80918769-80918975 ( 5) CGGGCGTGGTGG 1 chr13:45983413-45983726 ( 58) CGGGCGTGGTGG 1 chr13:29973258-29973556 ( 51) CGGGCGTGGTGG 1 chr12:127553439-12755375 ( 58) CGGGCGTGGTGG 1 chr12:97854003-97854314 ( 58) CGGGCGTGGTGG 1 chr12:80190505-80190816 ( 33) CGGGCGTGGTGG 1 chr12:27501134-27501445 ( 33) CGGGCGTGGTGG 1 chr12:11105933-11106239 ( 55) CGGGCGTGGTGG 1 chrX:68515044-68515355 ( 33) CGGGCGTGGTGG 1 chr9:26633488-26633796 ( 56) CGGGCGTGGTGG 1 chr8:119811524-119811828 ( 36) CGGGCGTGGTGG 1 chr8:70435143-70435453 ( 33) CGGGCGTGGTGG 1 chr7:27283030-27283334 ( 35) CGGGCGTGGTGG 1 chr7:15241189-15241488 ( 28) CGGGCGTGGTGG 1 chr6:105682220-105682530 ( 32) CGGGCGTGGTGG 1 chr6:94471871-94472170 ( 36) CGGGCGTGGTGG 1 chr6:80230026-80230337 ( 58) CGGGCGTGGTGG 1 chr5:175697181-175697480 ( 39) CGGGCGTGGTGG 1 chr5:156132458-156132767 ( 57) CGGGCGTGGTGG 1 chr5:120021416-120021739 ( 64) CGGGCGTGGTGG 1 chr5:38852718-38853030 ( 57) CGGGCGTGGTGG 1 chr4:179313551-179313862 ( 33) CGGGCGTGGTGG 1 chr3:180292834-180293141 ( 35) CGGGCGTGGTGG 1 chr3:150081721-150081963 ( 3) CGGGCGTGGTGG 1 chr3:110355502-110355807 ( 55) CGGGCGTGGTGG 1 chr3:83327863-83328166 ( 37) CGGGCGTGGTGG 1 chr3:57631716-57632021 ( 55) CGGGCGTGGTGG 1 chr3:12984815-12985123 ( 56) CGGGCGTGGTGG 1 chr2:220874876-220875183 ( 35) CGGGCGTGGTGG 1 chr2:170135513-170135811 ( 51) CGGGCGTGGTGG 1 chr2:56622988-56623299 ( 58) CGGGCGTGGTGG 1 chr1:226701322-226701631 ( 34) CGGGCGTGGTGG 1 chr1:190646539-190646850 ( 58) CGGGCGTGGTGG 1 chr1:179675273-179675578 ( 55) CGGGCGTGGTGG 1 chr1:170905405-170905608 ( 87) CGGGCGTGGTGG 1 chr1:102860402-102860712 ( 57) CGGGCGTGGTGG 1 chr1:80013627-80013936 ( 34) CGGGCGTGGTGG 1 chr13:49666438-49666740 ( 29) CAGGCGTGGTGG 1 chrX:90711468-90711748 ( 17) CAGGCGTGGTGG 1 chr9:67392692-67392896 ( 4) CAGGCGTGGTGG 1 chr7:123324490-123324552 ( 4) CAGGCGTGGTGG 1 chr12:31968445-31968747 ( 53) CGGGCATGGTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 15277 bayes= 8.7419 E= 1.2e-152 -1229 189 -1229 -1229 -152 -1229 177 -1229 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 189 -1229 -1229 -352 -1229 186 -1229 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -1229 -1229 -1229 212 -1229 -1229 189 -1229 -1229 -1229 189 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 50 E= 1.2e-152 0.000000 1.000000 0.000000 0.000000 0.080000 0.000000 0.920000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.020000 0.000000 0.980000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGTGGTGG MEME-9 regular expression -------------------------------------------------------------------------------- CGGGCGTGGTGG -------------------------------------------------------------------------------- Time 264.55 secs. ******************************************************************************** ******************************************************************************** MOTIF TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 width = 30 sites = 18 llr = 554 E-value = 6.9e-117 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 Description -------------------------------------------------------------------------------- Simplified A 11711:81:9:11:::1191::1:11a::: pos.-specific C 1:1188::11::::a:6::1a:981::99: probability G 113811289::99:::191::::::9:::: matrix T 78::11:1::a11a:a3::9:a:28::11a bits 2.1 * * * * * * 1.9 * *** ** * * 1.7 ** *** * *** ***** 1.5 *** *** ****** ***** Relative 1.3 * * ******** ************* Entropy 1.1 * * * ******** ************* (44.4 bits) 0.8 **************** ************* 0.6 ****************************** 0.4 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel TTAGCCAGGATGGTCTCGATCTCCTGACCT consensus G G T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr14:36237045-36237274 - 2 9.25e-19 TTTCACTGTG TTAGCCAGGATGGTCTCGATCTCCTGACCT C chrX_KI270913v1_alt:1757 + 35 2.85e-17 tttcaccgtg ttggccaggatggtctcgatctcttgacct cgtgatccgc chrX_KI270880v1_alt:1866 + 35 2.85e-17 tttcaccgtg ttggccaggatggtctcgatctcttgacct cgtgatccgc chr8:52858137-52858312 + 44 4.29e-17 tttctctgtg ttagccaggatggtcttgatctccagacct catgatccac chr11:83737671-83737832 - 36 1.32e-16 TTTCACAGTG TTAACCAAGATGGTCTCGATCTCCTGACCT CGTTATCCAC chr17:2518019-2518174 + 34 1.72e-16 tttcaccgtg ttagctgggatggtcttgatctcctgacct tgtgatccgc chr11:65519458-65519584 + 19 3.92e-16 tttcaccgtg ttagccaggatggtctggatctccagacct tgtgatccac chr15:50400632-50400847 - 8 4.39e-16 TTTCACCATG TTAGCCAGGATGTTCTCAATCTCCTGACCT CGTGATC chr1:117166472-117166648 - 28 6.61e-16 TTCACCATGT GTAGCCAGGATGGTCTAGATCTCCTGACCT TGTGATCCAC chr12:86342583-86342738 + 34 1.00e-15 tttcaccatg ttagccaggatgatctcgatctcctgatct cgtgatccgc chr22:34640392-34640566 + 43 1.34e-15 tttcaccatg ttagccaggattgtctcggtctcctgacct cgtgatccac chr14:86134945-86135099 + 33 1.46e-15 acaccccgtg ttagccaggatggtctcgacctcctgactt cgtgatccgc chr17:74122798-74122948 + 34 2.13e-15 tttaaccgtg ttagccaggatagtctcaatctcttgacct tgtgatccac chr6:23069655-23069806 + 32 2.56e-15 tttcactgtg ttagccaggatggtcttgatctcccaacct catgatcctc chr8:25279923-25280064 + 25 2.40e-13 ttttaccatg ctgggcaggctggtcttgaactcctgacct caagtgatcc chr5:17872575-17872741 + 39 8.19e-12 ccatgttagc caggatgacctggtctcgatctcctgacct catgatccgt chr5:80205785-80205913 - 52 9.94e-12 CATGTTGGCC AGGATGGTCATGGTCTTGATCTCCTGACCT CACGATCCGC chrY:17202757-17202973 + 64 2.53e-11 tgaccatgtt agccaggtgatggtctcgatctactgacct cgtcacc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:36237045-36237274 9.2e-19 1_[-10]_69 chrX_KI270913v1_alt:1757 2.9e-17 34_[+10]_36 chrX_KI270880v1_alt:1866 2.9e-17 34_[+10]_36 chr8:52858137-52858312 4.3e-17 43_[+10]_27 chr11:83737671-83737832 1.3e-16 35_[-10]_35 chr17:2518019-2518174 1.7e-16 33_[+10]_37 chr11:65519458-65519584 3.9e-16 18_[+10]_52 chr15:50400632-50400847 4.4e-16 7_[-10]_63 chr1:117166472-117166648 6.6e-16 27_[-10]_43 chr12:86342583-86342738 1e-15 33_[+10]_37 chr22:34640392-34640566 1.3e-15 42_[+10]_28 chr14:86134945-86135099 1.5e-15 32_[+10]_38 chr17:74122798-74122948 2.1e-15 33_[+10]_37 chr6:23069655-23069806 2.6e-15 31_[+10]_39 chr8:25279923-25280064 2.4e-13 24_[+10]_46 chr5:17872575-17872741 8.2e-12 38_[+10]_32 chr5:80205785-80205913 9.9e-12 51_[-10]_19 chrY:17202757-17202973 2.5e-11 63_[+10]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTAGCCAGGATGGTCTCGATCTCCTGACCT width=30 seqs=18 chr14:36237045-36237274 ( 2) TTAGCCAGGATGGTCTCGATCTCCTGACCT 1 chrX_KI270913v1_alt:1757 ( 35) TTGGCCAGGATGGTCTCGATCTCTTGACCT 1 chrX_KI270880v1_alt:1866 ( 35) TTGGCCAGGATGGTCTCGATCTCTTGACCT 1 chr8:52858137-52858312 ( 44) TTAGCCAGGATGGTCTTGATCTCCAGACCT 1 chr11:83737671-83737832 ( 36) TTAACCAAGATGGTCTCGATCTCCTGACCT 1 chr17:2518019-2518174 ( 34) TTAGCTGGGATGGTCTTGATCTCCTGACCT 1 chr11:65519458-65519584 ( 19) TTAGCCAGGATGGTCTGGATCTCCAGACCT 1 chr15:50400632-50400847 ( 8) TTAGCCAGGATGTTCTCAATCTCCTGACCT 1 chr1:117166472-117166648 ( 28) GTAGCCAGGATGGTCTAGATCTCCTGACCT 1 chr12:86342583-86342738 ( 34) TTAGCCAGGATGATCTCGATCTCCTGATCT 1 chr22:34640392-34640566 ( 43) TTAGCCAGGATTGTCTCGGTCTCCTGACCT 1 chr14:86134945-86135099 ( 33) TTAGCCAGGATGGTCTCGACCTCCTGACTT 1 chr17:74122798-74122948 ( 34) TTAGCCAGGATAGTCTCAATCTCTTGACCT 1 chr6:23069655-23069806 ( 32) TTAGCCAGGATGGTCTTGATCTCCCAACCT 1 chr8:25279923-25280064 ( 25) CTGGGCAGGCTGGTCTTGAACTCCTGACCT 1 chr5:17872575-17872741 ( 39) CAGGATGACCTGGTCTCGATCTCCTGACCT 1 chr5:80205785-80205913 ( 52) AGGATGGTCATGGTCTTGATCTCCTGACCT 1 chrY:17202757-17202973 ( 64) AGCCAGGTGATGGTCTCGATCTACTGACCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 11335 bayes= 9.43078 E= 6.9e-117 -105 -128 -228 165 -205 -1081 -128 186 154 -228 4 -1081 -105 -228 162 -1081 -105 153 -228 -205 -1081 153 -128 -105 176 -1081 -28 -1081 -105 -1081 153 -105 -1081 -128 172 -1081 195 -128 -1081 -1081 -1081 -1081 -1081 212 -205 -1081 172 -205 -205 -1081 172 -205 -1081 -1081 -1081 212 -1081 189 -1081 -1081 -1081 -1081 -1081 212 -205 118 -228 27 -105 -1081 172 -1081 204 -1081 -228 -1081 -205 -228 -1081 195 -1081 189 -1081 -1081 -1081 -1081 -1081 212 -205 181 -1081 -1081 -1081 162 -1081 -46 -105 -228 -1081 186 -205 -1081 181 -1081 212 -1081 -1081 -1081 -1081 181 -1081 -205 -1081 181 -1081 -205 -1081 -1081 -1081 212 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 18 E= 6.9e-117 0.111111 0.111111 0.055556 0.722222 0.055556 0.000000 0.111111 0.833333 0.666667 0.055556 0.277778 0.000000 0.111111 0.055556 0.833333 0.000000 0.111111 0.777778 0.055556 0.055556 0.000000 0.777778 0.111111 0.111111 0.777778 0.000000 0.222222 0.000000 0.111111 0.000000 0.777778 0.111111 0.000000 0.111111 0.888889 0.000000 0.888889 0.111111 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.055556 0.000000 0.888889 0.055556 0.055556 0.000000 0.888889 0.055556 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.055556 0.611111 0.055556 0.277778 0.111111 0.000000 0.888889 0.000000 0.944444 0.000000 0.055556 0.000000 0.055556 0.055556 0.000000 0.888889 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.055556 0.944444 0.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.111111 0.055556 0.000000 0.833333 0.055556 0.000000 0.944444 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.944444 0.000000 0.055556 0.000000 0.944444 0.000000 0.055556 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAGCCAGGATGGTCTCGATCTCCTGACCT MEME-10 regular expression -------------------------------------------------------------------------------- TT[AG]GCC[AG]GGATGGTCT[CT]GATCTCCTGACCT -------------------------------------------------------------------------------- Time 282.41 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:49196782-49196826 1.61e-06 10_[-8(6.78e-10)]_12 chr1:50773164-50773272 2.47e-02 18_[-8(1.48e-05)]_60 chr1:55876052-55876207 2.42e-33 27_[-7(1.28e-21)]_6_[+8(4.43e-10)]_\ 4 chr1:66742460-66742768 1.68e-54 6_[+2(2.04e-15)]_1_[+5(8.78e-19)]_3_\ [-3(8.13e-20)]_2 chr1:80013627-80013936 3.26e-58 2_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_6 chr1:102860402-102860712 3.42e-58 7_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)]_1 chr1:107851102-107851193 1.80e-13 55_[+8(2.64e-13)]_14 chr1:117166472-117166648 2.35e-58 16_[-7(2.29e-18)]_9_[+1(2.37e-15)]_\ 3 chr1:143489358-143489403 8.06e-18 8_[+5(1.19e-17)]_6 chr1:144315002-144315052 1.42e-17 13_[+5(1.19e-17)]_6 chr1:144651329-144651379 1.42e-17 6_[-5(1.19e-17)]_13 chr1:151855091-151855147 3.28e-07 29_[+8(3.06e-10)]_5 chr1:151905406-151905446 3.29e-07 3_[-8(1.06e-12)]_15 chr1:170905405-170905608 5.16e-71 3_[-7(1.34e-23)]_8_[+1(6.92e-20)]_3_\ [+9(1.09e-07)]_2 chr1:179675273-179675578 6.49e-74 5_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)] chr1:190646539-190646850 9.16e-58 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)] chr1:214449005-214449305 9.00e-81 2_[+2(3.88e-16)]_1_[+5(8.78e-19)]_6_\ [-1(6.92e-20)]_3 chr1:226701322-226701631 3.26e-58 2_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_6 chr1:241760759-241760935 3.32e-17 69_[+2(3.88e-16)]_5 chr2:56622988-56623299 9.16e-58 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)] chr2:5351736-5351774 9.30e-06 11_[+8(1.07e-11)]_5 chr2:47748993-47749030 9.38e-08 2_[-4(8.64e-09)]_[-9(4.31e-05)]_5 chr2:79527350-79527634 4.27e-36 12_[+3(2.90e-16)]_18_[-5(2.91e-15)]_\ 8 chr2:89650439-89650484 8.06e-18 8_[+5(1.19e-17)]_6 chr2:91724611-91724658 5.77e-18 8_[+5(1.19e-17)]_8 chr2:109026784-109026930 5.39e-24 15_[-6(3.30e-07)]_31_[+1(6.92e-20)]_\ 1 chr2:131172009-131172174 6.87e-40 10_[-8(1.42e-10)]_5_[+7(5.88e-25)]_\ 22 chr2:170135513-170135811 9.26e-83 1_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)]_4 chr2:220874876-220875183 6.49e-74 [+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_5 chr3:12984815-12985123 3.08e-57 6_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(6.02e-19)]_2 chr3:54256740-54256776 5.73e-11 3_[+8(2.64e-13)]_11 chr3:57631716-57632021 6.49e-74 5_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)] chr3:63966958-63967099 3.95e-03 61_[+2(1.38e-05)]_13 chr3:83327863-83328166 6.49e-74 2_[+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_3 chr3:100587918-100588229 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chr3:110355502-110355807 6.49e-74 5_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)] chr3:112787770-112787974 4.92e-48 3_[-9(8.84e-06)]_[-3(1.88e-15)]_11_\ [+7(3.18e-21)]_2 chr3:113913410-113913448 7.64e-13 4_[+8(6.64e-12)]_12 chr3:150081721-150081963 9.04e-42 5_[-5(4.04e-19)]_1_[-2(3.88e-16)]_\ 37 chr3:176824179-176824488 2.96e-56 2_[+3(8.13e-20)]_3_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_6 chr3:178041064-178041205 9.78e-60 15_[-7(6.04e-21)]_8_[+1(1.28e-19)]_\ 5 chr3:179760282-179760582 1.38e-80 2_[+2(3.88e-16)]_1_[+5(2.66e-18)]_6_\ [-1(6.92e-20)]_3 chr3:180292834-180293141 6.49e-74 [+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_5 chr3:191048912-191048947 3.72e-10 10_[-8(5.69e-12)]_3 chr4:39399251-39399297 3.53e-06 15_[+8(1.43e-09)]_9 chr4:71142510-71142562 1.83e-03 [-1(1.28e-06)]_21 chr4:100467396-100467701 1.39e-68 1_[+1(1.24e-18)]_10_[-5(8.78e-19)]_\ 1_[-2(3.88e-16)] chr4:102224753-102224927 4.17e-49 23_[+1(1.28e-19)]_6_[-5(6.70e-16)]_\ 9 chr4:109567555-109567641 3.96e-13 4_[-9(8.55e-05)]_2_[-1(2.02e-10)]_\ 37 chr4:158494157-158494192 9.17e-15 1_[+8(2.64e-13)]_12 chr4:179313551-179313862 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chr4:181228546-181228599 2.32e-09 16_[+5(9.33e-11)]_6 chr5:17872575-17872741 5.85e-22 6_[-8(6.43e-11)]_10_[+10(8.19e-12)]_\ 32 chr5:28356843-28357123 4.60e-42 13_[+2(3.88e-16)]_1_[+5(4.04e-19)]_\ 29 chr5:38852718-38853030 1.30e-52 7_[+2(3.88e-16)]_1_[+5(4.04e-19)]_4_\ [-3(8.80e-14)] chr5:73920549-73920670 6.45e-07 [-8(2.64e-13)]_78 chr5:80205785-80205913 2.24e-20 1_[+4(1.39e-05)]_5_[-6(1.10e-10)]_5_\ [-10(9.94e-12)]_19 chr5:80205944-80205972 1.53e-02 14_[+9(3.13e-06)]_2 chr5:85983802-85984072 5.38e-40 17_[-5(8.78e-19)]_1_[-2(3.88e-16)]_\ 25 chr5:120021416-120021739 9.76e-42 14_[+2(3.88e-16)]_1_[+5(4.04e-19)]_\ 28 chr5:156132458-156132767 2.03e-54 7_[+2(2.04e-15)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)]_1 chr5:156463181-156463341 2.99e-41 8_[-8(9.36e-11)]_5_[+7(3.33e-24)]_\ 24 chr5:175697181-175697480 9.26e-83 4_[+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_1 chr6:11172258-11172318 9.26e-06 32_[+8(1.70e-08)]_6 chr6:23069655-23069806 1.32e-38 4_[-8(3.16e-12)]_5_[+7(5.46e-18)]_\ 28 chr6:31465872-31465917 3.33e-02 16_[-9(3.74e-07)]_17 chr6:80230026-80230337 9.16e-58 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)] chr6:94471871-94472170 6.49e-74 1_[+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_4 chr6:100086555-100086863 3.26e-58 2_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_6 chr6:101255096-101255140 3.81e-14 10_[+8(2.64e-13)]_12 chr6:105682220-105682530 9.16e-58 [+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_8 chr6:139657737-139658060 9.76e-42 14_[+2(3.88e-16)]_1_[+5(4.04e-19)]_\ 28 chr6:153576209-153576508 1.12e-77 4_[+1(6.92e-20)]_6_[-5(6.31e-17)]_1_\ [-2(3.88e-16)]_1 chr6:164662624-164662736 3.75e-16 62_[+8(2.64e-13)]_16 chr7:15241189-15241488 4.60e-42 30_[-5(4.04e-19)]_1_[-2(3.88e-16)]_\ 12 chr7:27283030-27283334 6.49e-74 [+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_5 chr7:54798312-54798374 1.53e-28 7_[+1(4.70e-18)]_3_[+9(2.94e-07)]_9 chr7:70971103-70971142 5.66e-01 39 chr7:71156718-71156882 4.42e-13 74_[+6(4.46e-13)]_4 chr7:87788327-87788393 4.88e-03 35_[+8(1.61e-08)]_9 chr7:99368655-99368725 3.39e-15 14_[+5(2.91e-16)]_25 chr7:120959630-120959944 4.60e-42 9_[+2(3.88e-16)]_1_[+5(4.04e-19)]_\ 33 chr7:123324490-123324552 5.93e-27 3_[-5(6.67e-11)]_1_[-6(5.06e-12)]_5 chr7:131116023-131116176 7.32e-41 28_[-7(5.38e-24)]_5_[+8(4.10e-11)]_\ 4 chr7:133581476-133581782 6.49e-74 [+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_5 chr7:139444308-139444347 5.98e-21 [+5(2.66e-18)]_8 chr8:17042931-17043238 2.96e-56 6_[+2(3.88e-16)]_1_[+5(8.78e-19)]_3_\ [-3(8.13e-20)]_2 chr8:21150142-21150447 2.25e-70 1_[+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(2.27e-14)]_4 chr8:25279469-25279609 4.77e-01 100 chr8:25279923-25280064 6.94e-17 24_[+10(2.40e-13)]_7_[+6(6.36e-08)]_\ 17 chr8:27679227-27679272 4.50e-01 45 chr8:35178843-35179149 1.70e-40 33_[-5(1.22e-18)]_1_[-2(3.88e-16)]_\ 9 chr8:51184877-51185071 6.29e-62 14_[-1(1.42e-18)]_8_[+7(3.33e-24)]_\ 6 chr8:52858137-52858312 7.31e-63 4_[-1(2.76e-18)]_8_[+7(2.08e-20)]_\ 16 chr8:58532202-58532241 5.58e-08 [-4(5.82e-10)]_21 chr8:70435143-70435453 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chr8:117732110-117732165 2.04e-20 4_[+3(5.35e-16)]_[+9(8.84e-06)]_8 chr8:119811524-119811828 6.49e-74 1_[+1(6.92e-20)]_6_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_4 chr8:142958446-142958502 3.34e-12 23_[-5(1.30e-12)]_2 chr9:6659993-6660190 1.44e-64 15_[-1(1.24e-18)]_8_[+7(3.18e-25)]_\ 5 chr9:26633488-26633796 3.26e-58 6_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)]_2 chr9:34117291-34117449 8.41e-37 7_[-8(2.22e-12)]_5_[+7(6.29e-23)]_\ 25 chr9:38971031-38971235 2.05e-64 2_[-7(2.33e-22)]_8_[+1(6.92e-20)]_3_\ [+9(2.02e-07)]_3 chr9:42405478-42405785 6.18e-72 [+1(6.92e-20)]_6_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_5 chr9:63675988-63676299 8.49e-56 8_[+2(3.88e-16)]_1_[+5(8.78e-19)]_3_\ [-3(8.13e-20)] chr9:67392692-67392896 2.05e-64 3_[-9(2.02e-07)]_3_[-1(6.92e-20)]_8_\ [+7(2.33e-22)]_2 chr9:126242770-126243075 6.75e-72 5_[+2(3.88e-16)]_1_[+5(1.22e-18)]_6_\ [-1(6.92e-20)] chrX:503249-503405 2.25e-41 7_[-8(7.31e-11)]_5_[+7(7.90e-23)]_\ 25 chrX:870505-870663 4.03e-37 18_[+1(4.56e-18)]_5_[-5(1.06e-10)]_\ 15 chrX:47474898-47475082 3.95e-61 12_[-7(8.27e-24)]_8_[+1(1.42e-18)]_\ 8 chrX:68515044-68515355 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chrX:83712554-83712752 1.12e-64 5_[-7(5.88e-25)]_8_[+1(6.41e-19)]_2_\ [+9(4.31e-05)]_1 chrX:90711468-90711748 3.25e-41 19_[-5(4.04e-19)]_1_[-2(3.88e-16)]_\ 23 chrX:111616071-111616224 4.64e-45 5_[-8(1.22e-12)]_5_[+7(3.18e-25)]_\ 27 chrX:117320398-117320706 2.96e-56 2_[+3(8.13e-20)]_3_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_6 chrY:503249-503405 2.25e-41 7_[-8(7.31e-11)]_5_[+7(7.90e-23)]_\ 25 chrY:870505-870663 4.03e-37 18_[+1(4.56e-18)]_5_[-5(1.06e-10)]_\ 15 chrY:7017041-7017199 3.59e-35 24_[-7(2.79e-21)]_5_[+8(7.29e-10)]_\ 8 chrY:7209479-7209524 2.09e-17 1_[-5(8.51e-18)]_13 chrY:10880518-10880584 2.84e-03 1_[-8(3.36e-05)]_9_[+3(9.27e-05)]_3 chrY:17202757-17202973 1.43e-20 19_[-3(7.48e-13)]_13_\ [+10(2.53e-11)]_7 chr10:53015078-53015136 3.95e-07 26_[+8(8.35e-11)]_10 chr10:73991492-73991538 1.88e-08 3_[+2(1.40e-09)]_17 chr10:74115084-74115377 3.18e-05 36_[+1(2.65e-05)]_16_[+9(6.04e-06)]_\ 5 chr10:91490609-91490919 3.10e-56 1_[+3(8.13e-20)]_3_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_7 chr10:103179498-10317955 9.59e-18 6_[+5(6.72e-17)]_24 chr10:108572611-10857267 1.62e-05 11_[-5(4.20e-08)]_22 chr10:118219692-11821999 3.77e-59 [+1(2.56e-14)]_8_[-5(1.02e-17)]_1_\ [-2(2.04e-15)]_3 chr11:9431465-9431520 1.81e-06 5_[-8(2.08e-12)]_28 chr11:45004628-45004696 1.63e-20 13_[-5(5.16e-16)]_1_[-6(9.90e-09)]_\ 1 chr11:65519377-65519430 2.26e-09 1_[+6(2.72e-11)]_5_[-4(2.20e-06)]_7 chr11:65519458-65519584 2.22e-34 18_[+7(2.19e-18)]_21_[-4(1.39e-05)]_\ 2 chr11:83231898-83231940 2.22e-17 9_[-5(2.76e-16)]_2 chr11:83737671-83737832 1.50e-37 24_[-7(6.84e-17)]_5_[+8(8.98e-10)]_\ 8 chr11:95287194-95287506 6.19e-56 2_[+2(3.88e-16)]_1_[+5(5.57e-18)]_9_\ [-3(1.86e-17)] chr11:130468483-13046878 1.46e-69 1_[+1(1.28e-19)]_6_[-5(5.57e-18)]_1_\ [-2(3.88e-16)]_4 chr12:7837715-7837754 3.36e-11 [+5(2.72e-11)]_8 chr12:7838057-7838069 6.50e-01 12 chr12:8908731-8908793 1.22e-01 62 chr12:11105933-11106239 6.49e-74 5_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)] chr12:27501134-27501445 1.64e-57 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(2.04e-15)]_7 chr12:31968445-31968747 4.86e-73 3_[+2(3.88e-16)]_1_[+5(5.57e-18)]_6_\ [-1(6.92e-20)]_2 chr12:49722814-49722967 1.27e-43 28_[-7(1.12e-22)]_5_[+8(1.22e-12)]_\ 4 chr12:80190505-80190816 7.06e-56 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(2.04e-15)]_7 chr12:86342583-86342738 1.62e-42 6_[-8(1.22e-12)]_5_[+7(2.61e-22)]_\ 26 chr12:97854003-97854314 9.16e-58 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)] chr12:123215955-12321610 5.41e-36 28_[-7(1.15e-20)]_5_[+8(1.22e-12)]_\ 4 chr12:127553439-12755375 9.16e-58 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)] chr13:29973258-29973556 9.26e-83 1_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)]_4 chr13:45307617-45307653 4.60e-05 12_[-6(7.52e-12)]_2 chr13:45983413-45983726 1.25e-43 8_[+2(3.88e-16)]_1_[+5(4.04e-19)]_\ 34 chr13:49666438-49666740 5.57e-42 31_[-5(4.04e-19)]_1_[-2(3.88e-16)]_\ 11 chr13:77069340-77069538 7.24e-60 5_[-7(3.77e-23)]_8_[+1(1.42e-18)]_\ 15 chr13:80918769-80918975 9.48e-68 4_[-9(1.09e-07)]_3_[-1(6.92e-20)]_8_\ [+7(2.09e-23)]_1 chr13:112578277-11257858 3.26e-58 2_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_6 chr14:36237045-36237274 3.94e-32 1_[-10(9.25e-19)]_11_[+3(3.35e-14)]_\ 13_[+9(3.13e-06)]_2 chr14:86134945-86135099 2.35e-34 32_[+7(6.47e-19)]_27 chr14:93459674-93459969 9.26e-83 [+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)]_5 chr15:29650690-29650727 3.51e-02 7_[+4(2.66e-07)]_12 chr15:33001728-33001782 1.52e-03 1_[-8(2.21e-09)]_31 chr15:43452912-43453218 4.22e-67 [+1(6.92e-20)]_6_[-5(1.43e-17)]_1_\ [-2(2.43e-15)]_5 chr15:44870289-44870318 5.68e-01 29 chr15:45099005-45099309 6.49e-74 4_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)]_1 chr15:50312192-50312235 3.35e-07 17_[+8(2.08e-12)]_4 chr15:50400632-50400847 1.07e-30 7_[-10(4.39e-16)]_10_[+3(7.94e-16)]_\ [+9(8.84e-06)]_10 chr15:52036069-52036126 1.62e-10 24_[-5(2.63e-11)]_2 chr15:78506568-78506605 8.33e-17 1_[-5(2.18e-16)]_5 chr15:89356046-89356084 3.88e-09 [-5(6.61e-08)]_7 chr16:12822695-12822744 5.89e-16 10_[+5(2.18e-16)]_8 chr16:13852959-13852988 4.83e-09 3_[+8(2.64e-13)]_4 chr16:22696236-22696298 8.95e-19 1_[+6(6.66e-12)]_1_[+5(1.30e-12)]_7 chr16:24182927-24183125 1.15e-42 8_[+5(1.01e-16)]_7_[-3(7.43e-15)]_\ 23 chr16:64800787-64801098 2.96e-54 8_[+2(2.04e-15)]_1_[+5(7.24e-18)]_3_\ [-3(8.13e-20)] chr16:70503595-70503893 9.00e-81 1_[+2(3.88e-16)]_1_[+5(8.78e-19)]_6_\ [-1(6.92e-20)]_4 chr16:74119569-74119759 9.45e-16 6_[-2(3.88e-16)]_68 chr16:87940803-87941113 6.24e-54 7_[+2(3.88e-16)]_1_[+5(4.98e-17)]_3_\ [-3(8.13e-20)]_1 chr17:2518019-2518174 2.51e-40 6_[-8(1.22e-12)]_5_[+7(2.89e-18)]_\ 26 chr17:7958509-7958659 1.14e-41 4_[-8(6.28e-10)]_5_[+7(1.13e-24)]_\ 28 chr17:64491446-64491517 3.45e-06 49_[+8(4.10e-11)] chr17:67631347-67631658 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chr17:72796742-72796800 4.67e-30 4_[+6(4.05e-11)]_1_[+5(1.22e-18)] chr17:74122798-74122948 1.90e-41 6_[-8(5.06e-11)]_5_[+7(4.21e-21)]_\ 26 chr17:82471511-82471807 1.23e-78 4_[+1(1.28e-19)]_6_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_1 chr18:29952436-29952738 6.18e-72 3_[+2(3.88e-16)]_1_[+5(8.78e-19)]_6_\ [-1(6.92e-20)]_2 chr19:1128113-1128156 1.36e-07 11_[+8(7.69e-12)]_10 chr19:8351639-8351674 7.80e-05 6_[+4(1.89e-11)]_11 chr19:10833468-10833483 9.88e-01 15 chr19:10833604-10833663 7.93e-10 8_[-5(3.09e-11)]_20 chr19:14445899-14445950 6.69e-20 5_[-5(5.57e-18)]_15 chr19:14707541-14707850 3.42e-58 7_[+2(3.88e-16)]_1_[+5(4.04e-19)]_3_\ [-3(8.13e-20)]_1 chr19:15944245-15944399 7.07e-48 2_[-3(1.06e-13)]_11_[+7(5.98e-23)]_\ 15 chr19:36886705-36887013 3.39e-44 2_[+3(5.34e-15)]_10_[-5(4.04e-19)]_\ 1_[-6(8.57e-14)]_3 chr19:50386910-50387096 2.95e-64 11_[-7(1.54e-22)]_8_[+1(6.92e-20)]_\ 9 chr19:53763523-53763568 7.71e-13 7_[+5(5.63e-13)]_7 chr19:53763876-53763893 9.75e-01 17 chr20:16598141-16598177 3.47e-07 12_[+8(1.06e-12)]_2 chr20:21136734-21136791 8.34e-06 9_[+5(5.18e-09)]_17 chr20:22674699-22675010 3.42e-58 1_[+3(8.13e-20)]_3_[-5(4.04e-19)]_1_\ [-2(3.88e-16)]_7 chr20:38955176-38955488 1.11e-44 1_[+3(6.32e-08)]_3_[-5(8.78e-19)]_1_\ [-2(3.88e-16)]_7 chr20:41528594-41528646 2.07e-08 11_[-5(2.40e-11)]_10 chr20:43661048-43661123 1.71e-06 46_[+8(1.97e-12)]_7 chr20:43910124-43910432 2.96e-56 6_[+2(3.88e-16)]_1_[+5(8.78e-19)]_3_\ [-3(8.13e-20)]_2 chr20:49735059-49735100 3.58e-06 5_[-8(1.07e-11)]_14 chr20:60860087-60860137 3.96e-12 10_[+5(1.91e-11)]_9 chr21:18751573-18751879 6.49e-74 5_[+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)] chr21:33222105-33222166 2.50e-10 12_[-8(2.87e-11)]_27 chr22:24021546-24021597 1.81e-07 16_[+5(1.58e-09)]_4 chr22:34640392-34640566 4.14e-72 3_[-1(6.92e-20)]_8_[+7(4.13e-20)]_\ 17 chr22:45509615-45509716 1.17e-51 18_[+1(5.72e-19)]_6_[-5(7.24e-18)]_\ 14 chr1_KI270765v1_alt:1618 1.42e-17 6_[-5(1.19e-17)]_13 chr6_GL000251v2_alt:2943 2.01e-02 16_[-9(3.74e-07)]_13 chr6_GL000254v2_alt:2807 3.33e-02 16_[-9(3.74e-07)]_17 chr6_GL000256v2_alt:2765 4.73e-02 16_[-9(3.74e-07)]_20 chrX_KI270880v1_alt:1866 2.25e-41 7_[-8(7.31e-11)]_5_[+7(7.90e-23)]_\ 25 chrX_KI270913v1_alt:1757 2.25e-41 7_[-8(7.31e-11)]_5_[+7(7.90e-23)]_\ 25 chr14_KI270847v1_alt:574 9.26e-83 [+2(3.88e-16)]_1_[+5(4.04e-19)]_6_\ [-1(6.92e-20)]_5 chr15_KI270849v1_alt:202 5.68e-01 29 chr15_KI270905v1_alt:193 3.51e-02 7_[+4(2.66e-07)]_12 chr19_KI270865v1_alt:207 1.36e-07 11_[+8(7.69e-12)]_10 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: indra ********************************************************************************