******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYj4.MemeChipResults/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:91080440-91080517 1.0000 77 chr7:4699285-4699351 1.0000 66 chr11:67141384-67141484 1.0000 100 chr5:53605732-53605832 1.0000 100 chr8:127188699-127188799 1.0000 100 chr1:7890076-7890141 1.0000 65 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chr12:101250085-10125018 1.0000 100 chr13:47108288-47108388 1.0000 100 chr12:123376102-12337620 1.0000 100 chr6:42549860-42549960 1.0000 100 chrY:10667713-10667781 1.0000 68 chr5:146845305-146845405 1.0000 100 chr7:141404024-141404124 1.0000 100 chr3:48765664-48765752 1.0000 88 chr5:143363487-143363587 1.0000 100 chr2:212099204-212099270 1.0000 66 chr1:173198527-173198627 1.0000 100 chrX:81091845-81091945 1.0000 100 chr9:122735475-122735575 1.0000 100 chr7:57493745-57493809 1.0000 64 chr6:52340928-52340999 1.0000 71 chr11:80215519-80215619 1.0000 100 chr8:56284818-56284896 1.0000 78 chr11:113929725-11392982 1.0000 100 chr1:2007567-2007658 1.0000 91 chr10:103436015-10343610 1.0000 86 chr10:112185664-11218576 1.0000 100 chr6:80626160-80626260 1.0000 100 chr2:72380357-72380457 1.0000 100 chr3:171499931-171499999 1.0000 68 chr10:55678731-55678831 1.0000 100 chr8:102956659-102956759 1.0000 100 chr10:18074242-18074342 1.0000 100 chr1:236043516-236043616 1.0000 100 chr5:81151385-81151453 1.0000 68 chr10:20861201-20861301 1.0000 100 chr3:121554503-121554575 1.0000 72 chr1:70439663-70439763 1.0000 100 chr10:125863450-12586355 1.0000 100 chr3:95361036-95361117 1.0000 81 chr3:121561346-121561446 1.0000 100 chr6:25500765-25500865 1.0000 100 chr7:142598683-142598783 1.0000 100 chr7:93919933-93920033 1.0000 100 chr3:96409157-96409228 1.0000 71 chr9:94764861-94764961 1.0000 100 chr4:136153089-136153154 1.0000 65 chr10:10494994-10495094 1.0000 100 chr8:20827012-20827112 1.0000 100 chr12:86443581-86443681 1.0000 100 chr10:103183508-10318360 1.0000 100 chr9:29621060-29621160 1.0000 100 chr2:159242051-159242151 1.0000 100 chr2:227421572-227421619 1.0000 47 chr1:35813127-35813227 1.0000 100 chr1:105614447-105614547 1.0000 100 chr2:78822074-78822174 1.0000 100 chr10:24159497-24159597 1.0000 100 chr5:61968010-61968110 1.0000 100 chr3:129799528-129799628 1.0000 100 chr9:40200832-40200932 1.0000 100 chr2:26823213-26823313 1.0000 100 chrY:56834649-56834717 1.0000 68 chr12:110459231-11045933 1.0000 100 chr10:61496108-61496167 1.0000 59 chr1:247033252-247033352 1.0000 100 chr5:53876123-53876223 1.0000 100 chr15:30847484-30847539 1.0000 55 chr2:48204090-48204160 1.0000 70 chrX:677003-677103 1.0000 100 chr1:199381036-199381108 1.0000 72 chr10:55978206-55978280 1.0000 74 chr3:33997368-33997468 1.0000 100 chr8:80286977-80287058 1.0000 81 chr14:82205874-82205974 1.0000 100 chr6:6939368-6939468 1.0000 100 chr1:160234190-160234257 1.0000 67 chr9:89308502-89308578 1.0000 76 chr9:568468-568517 1.0000 49 chr1:180296845-180296945 1.0000 100 chr7:87049272-87049372 1.0000 100 chr3:109450844-109450944 1.0000 100 chr9:135428352-135428452 1.0000 100 chr7:66384415-66384515 1.0000 100 chr6:16914951-16915051 1.0000 100 chr6:42329708-42329808 1.0000 100 chr4:122970474-122970539 1.0000 65 chr7:69390876-69390962 1.0000 86 chr3:133502305-133502405 1.0000 100 chr6:43822021-43822121 1.0000 100 chr11:46836804-46836860 1.0000 56 chrY:677003-677103 1.0000 100 chr5:120085858-120085949 1.0000 91 chr11:61213110-61213179 1.0000 69 chr5:43507796-43507896 1.0000 100 chr10:122031397-12203149 1.0000 100 chr2:232088118-232088218 1.0000 100 chr9:105496202-105496299 1.0000 97 chr2:239334740-239334840 1.0000 100 chr12:1677999-1678058 1.0000 59 chr7:84538597-84538696 1.0000 99 chr12:8257003-8257076 1.0000 73 chr8:22940484-22940584 1.0000 100 chr5:70072840-70072940 1.0000 100 chr5:2460947-2461047 1.0000 100 chr5:54297787-54297887 1.0000 100 chrY:10951442-10951505 1.0000 63 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYj4.MemeChipResults/seqs-sampled -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYj4.MemeChipResults/meme_out -mod anr -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYj4.MemeChipResults/background -dna -revcomp -nostatus model: mod= anr nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 50 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 53046 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.244 C 0.256 G 0.256 T 0.244 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYj4.MemeChipResults/background): A 0.235 C 0.265 G 0.265 T 0.235 ******************************************************************************** ******************************************************************************** MOTIF CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 width = 31 sites = 50 llr = 1929 E-value = 7.8e-581 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::2:::::a::aaaaa:7:aaaaaa21821 pos.-specific C aa8::a:a::a::::::::a::::::::::8 probability G :::8::::::::::::::3::::::::::71 matrix T ::2:a:a:a::a:::::a::::::::8921: bits 2.1 * * ** ******* **** * 1.9 * ************** ****** 1.7 ** ************** ******* 1.5 ** ************** ******* ** Relative 1.3 ** ************************** Entropy 1.0 ***************************** (55.7 bits) 0.8 ******************************* 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel CCCGTCTCTACTAAAAATACAAAAAATTAGC consensus A G A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr9:135428352-135428452 + 1 1.11e-19 . cccgtctctactaaaaatacaaaaaattagc caggcgtggt chr1:236043516-236043616 + 2 1.11e-19 c cccgtctctactaaaaatacaaaaaattagc tgggcgtggt chr4:112684722-112684822 + 3 1.11e-19 ac cccgtctctactaaaaatacaaaaaattagc cgggcatggc chr3:32904539-32904639 + 8 1.11e-19 gtgaaac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr12:66593786-66593886 + 4 1.11e-19 aac cccgtctctactaaaaatacaaaaaattagc tgggtgtggt chr10:26094416-26094516 - 68 1.11e-19 AC CCCGTCTCTACTAAAAATACAAAAAATTAGC CAGGCGTGGT chr1:163012678-163012778 - 64 1.11e-19 TGAAAC CCCGTCTCTACTAAAAATACAAAAAATTAGC CGGGTGTGGT chr2:133172640-133172740 - 49 1.11e-19 ACAGTGAAAA CCCGTCTCTACTAAAAATACAAAAAATTAGC TGGGCGTGTT chr14:89611524-89611624 + 5 1.11e-19 aaac cccgtctctactaaaaatacaaaaaattagc cgggcatggc chr11:12627341-12627441 - 70 1.11e-19 . CCCGTCTCTACTAAAAATACAAAAAATTAGC TGGGCGTGGT chr6:112860999-112861099 + 16 1.11e-19 acggtgaaac cccgtctctactaaaaatacaaaaaattagc cgggcgtggt chr5:61968010-61968110 - 65 4.35e-19 GAAAC CCCGTCTCTACTAAAAATGCAAAAAATTAGC TGGGCGTGGT chr2:56120982-56121082 - 65 4.35e-19 GAAAC CCCATCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr3:33238627-33238727 + 3 4.35e-19 ac cccgtctctactaaaaatgcaaaaaattagc tgggcgtggt chr1:23898335-23898435 - 67 4.35e-19 AAC CCCGTCTCTACTAAAAATGCAAAAAATTAGC CGGGCGTGGT chr8:30892752-30892852 + 7 4.35e-19 taaaac cccgtctctactaaaaatgcaaaaaattagc cgggcgtggt chr6:36299323-36299423 - 69 4.35e-19 C CCCGTCTCTACTAAAAATGCAAAAAATTAGC TGGGCGTGGT chr3:126877273-126877373 + 10 4.35e-19 cggtgaaac cccatctctactaaaaatacaaaaaattagc tgggcgtggt chr9:15569533-15569633 + 3 4.35e-19 ac cccgtctctactaaaaatgcaaaaaattagc cgggcgtggt chr3:149568761-149568861 - 67 4.35e-19 AAC CCCGTCTCTACTAAAAATGCAAAAAATTAGC TGGGTGTGGT chr9:67218341-67218441 + 8 4.35e-19 gtgaaac cccgtctctactaaaaatgcaaaaaattagc caggcatggt chr6:15093621-15093721 + 6 4.35e-19 aaaac cccgtctctactaaaaatgcaaaaaattagc caggcatggt chr12:110459231-11045933 - 68 6.47e-19 AC CCTGTCTCTACTAAAAATACAAAAAATTAGC CAGGCATGGT chr7:18991358-18991458 + 4 6.47e-19 aac cctgtctctactaaaaatacaaaaaattagc caggtgtggt chr7:75570290-75570390 - 64 6.47e-19 TGAAAC CCTGTCTCTACTAAAAATACAAAAAATTAGC CGGGCGTGGT chr6:160599062-160599162 + 11 6.47e-19 acagtgaaac cctgtctctactaaaaatacaaaaaattagc cgggtgtggt chr5:2460947-2461047 + 7 1.39e-18 tgaaac cccatctctactaaaaatgcaaaaaattagc caggcgtggt chr2:216641999-216642099 - 64 1.39e-18 TGAAAC CCCATCTCTACTAAAAATGCAAAAAATTAGC TGGGCGTGGT chr13:49257488-49257588 + 21 1.39e-18 atggtgaaac cccatctctactaaaaatgcaaaaaattagc cgggcgtggt chr9:29621060-29621160 + 7 2.11e-18 tgaaat cctgtctctactaaaaatacaaaaaattaac cgggcatggt chr1:219994640-219994740 - 70 2.11e-18 . CCTGTCTCTACTAAAAATGCAAAAAATTAGC TGGGTGTGGT chrX:111310050-111310150 + 15 3.28e-18 acggtgaaac ctcgtctctactaaaaatacaaaaaattagc caggcgtggt chr2:32481484-32481584 + 6 3.81e-18 gaaat cccgtctctactaaaaatagaaaaaattagc tggacgtggt chr6:139491925-139492025 + 8 6.94e-18 gtgaaac ccggtctctactaaaaatacaaaaaattagc tgggcgtggc chr9:129018612-129018712 + 9 9.09e-18 ggtgaaac ctcatctctactaaaaatacaaaaaattagc cgagcgtggt chr2:39205480-39205580 + 1 1.01e-17 . cccgtctctactaaaaatagaaaaaattaac caggcgtggt chr7:141404024-141404124 + 2 1.90e-17 c cccatctctactaaaaatacaaaatattagc tgggcgtggt chr12:120128835-12012893 - 70 2.67e-17 . CCCGTCTCTACTAAAAATACAAAAAAATTAG CCAGGCGTGG chr6:137419295-137419395 + 22 2.67e-17 ctggtgaaac cccgtctctactaaaaatacaaaaaaattag ccgggtgtgg chr11:19759090-19759190 - 61 2.67e-17 CGGTGAAAC CCCGTCTCTACTAAAAATACAAAAAAATTAG CCGGGCATGG chr13:22723569-22723669 - 61 2.67e-17 CTGTGAAAT CCCGTCTCTACTAAAAATACAAAAAAATTAG CCAGGCGTGG chr6:1968979-1969079 + 2 5.31e-17 c cccatctctactaaaaatacaaaaaaattag ctgggcatgg chr5:99909767-99909867 + 16 5.31e-17 gtggtgaaac cccatctctactaaaaatacaaaaaaattag ccgggcatgg chr1:36009929-36010029 - 69 6.33e-17 T CCTGTCTCTACTAAAAATACAAAAAAATTAG CCAGGCGTGG chr2:121302741-121302841 + 5 6.33e-17 aaac tccatctctactaaaaatacaaaaaataagc tgggcatggt chr9:119959087-119959187 + 4 8.68e-17 aac cccgtctctactaaaaatgcaaaaaaaaaaa ttagctaggc chr2:139276187-139276287 + 14 1.61e-16 acggtgaaac cccgtctctactaaaaatacaaaaaaaaaca gccgggcgtg chr4:1442888-1442988 - 70 1.68e-16 . CCCATCTCTACTAAAAATACAAAAAATAATT AGCCGGGCGT chr8:20827012-20827112 - 67 3.23e-16 AAC CCTGTCTCTACTAAAAATACAAAAAAAATTA GCCGGGCGTG chr6:56030632-56030732 + 1 3.23e-16 . cctgtctctactaaaaatacaaaaaaaatta gtggggcgtg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:135428352-135428452 1.1e-19 [+1]_69 chr1:236043516-236043616 1.1e-19 1_[+1]_68 chr4:112684722-112684822 1.1e-19 2_[+1]_67 chr3:32904539-32904639 1.1e-19 7_[+1]_62 chr12:66593786-66593886 1.1e-19 3_[+1]_66 chr10:26094416-26094516 1.1e-19 67_[-1]_2 chr1:163012678-163012778 1.1e-19 63_[-1]_6 chr2:133172640-133172740 1.1e-19 48_[-1]_21 chr14:89611524-89611624 1.1e-19 4_[+1]_65 chr11:12627341-12627441 1.1e-19 69_[-1] chr6:112860999-112861099 1.1e-19 15_[+1]_54 chr5:61968010-61968110 4.4e-19 64_[-1]_5 chr2:56120982-56121082 4.4e-19 64_[-1]_5 chr3:33238627-33238727 4.4e-19 2_[+1]_67 chr1:23898335-23898435 4.4e-19 66_[-1]_3 chr8:30892752-30892852 4.4e-19 6_[+1]_63 chr6:36299323-36299423 4.4e-19 68_[-1]_1 chr3:126877273-126877373 4.4e-19 9_[+1]_60 chr9:15569533-15569633 4.4e-19 2_[+1]_67 chr3:149568761-149568861 4.4e-19 66_[-1]_3 chr9:67218341-67218441 4.4e-19 7_[+1]_62 chr6:15093621-15093721 4.4e-19 5_[+1]_64 chr12:110459231-11045933 6.5e-19 67_[-1]_2 chr7:18991358-18991458 6.5e-19 3_[+1]_66 chr7:75570290-75570390 6.5e-19 63_[-1]_6 chr6:160599062-160599162 6.5e-19 10_[+1]_59 chr5:2460947-2461047 1.4e-18 6_[+1]_63 chr2:216641999-216642099 1.4e-18 63_[-1]_6 chr13:49257488-49257588 1.4e-18 20_[+1]_49 chr9:29621060-29621160 2.1e-18 6_[+1]_63 chr1:219994640-219994740 2.1e-18 69_[-1] chrX:111310050-111310150 3.3e-18 14_[+1]_55 chr2:32481484-32481584 3.8e-18 5_[+1]_64 chr6:139491925-139492025 6.9e-18 7_[+1]_62 chr9:129018612-129018712 9.1e-18 8_[+1]_61 chr2:39205480-39205580 1e-17 [+1]_69 chr7:141404024-141404124 1.9e-17 1_[+1]_68 chr12:120128835-12012893 2.7e-17 69_[-1] chr6:137419295-137419395 2.7e-17 21_[+1]_48 chr11:19759090-19759190 2.7e-17 60_[-1]_9 chr13:22723569-22723669 2.7e-17 60_[-1]_9 chr6:1968979-1969079 5.3e-17 1_[+1]_68 chr5:99909767-99909867 5.3e-17 15_[+1]_54 chr1:36009929-36010029 6.3e-17 68_[-1]_1 chr2:121302741-121302841 6.3e-17 4_[+1]_65 chr9:119959087-119959187 8.7e-17 3_[+1]_66 chr2:139276187-139276287 1.6e-16 13_[+1]_56 chr4:1442888-1442988 1.7e-16 69_[-1] chr8:20827012-20827112 3.2e-16 66_[-1]_3 chr6:56030632-56030732 3.2e-16 [+1]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCGTCTCTACTAAAAATACAAAAAATTAGC width=31 seqs=50 chr9:135428352-135428452 ( 1) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:236043516-236043616 ( 2) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr4:112684722-112684822 ( 3) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr3:32904539-32904639 ( 8) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr12:66593786-66593886 ( 4) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr10:26094416-26094516 ( 68) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr1:163012678-163012778 ( 64) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr2:133172640-133172740 ( 49) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr14:89611524-89611624 ( 5) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr11:12627341-12627441 ( 70) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr6:112860999-112861099 ( 16) CCCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr5:61968010-61968110 ( 65) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr2:56120982-56121082 ( 65) CCCATCTCTACTAAAAATACAAAAAATTAGC 1 chr3:33238627-33238727 ( 3) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr1:23898335-23898435 ( 67) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr8:30892752-30892852 ( 7) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr6:36299323-36299423 ( 69) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr3:126877273-126877373 ( 10) CCCATCTCTACTAAAAATACAAAAAATTAGC 1 chr9:15569533-15569633 ( 3) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr3:149568761-149568861 ( 67) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr9:67218341-67218441 ( 8) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr6:15093621-15093721 ( 6) CCCGTCTCTACTAAAAATGCAAAAAATTAGC 1 chr12:110459231-11045933 ( 68) CCTGTCTCTACTAAAAATACAAAAAATTAGC 1 chr7:18991358-18991458 ( 4) CCTGTCTCTACTAAAAATACAAAAAATTAGC 1 chr7:75570290-75570390 ( 64) CCTGTCTCTACTAAAAATACAAAAAATTAGC 1 chr6:160599062-160599162 ( 11) CCTGTCTCTACTAAAAATACAAAAAATTAGC 1 chr5:2460947-2461047 ( 7) CCCATCTCTACTAAAAATGCAAAAAATTAGC 1 chr2:216641999-216642099 ( 64) CCCATCTCTACTAAAAATGCAAAAAATTAGC 1 chr13:49257488-49257588 ( 21) CCCATCTCTACTAAAAATGCAAAAAATTAGC 1 chr9:29621060-29621160 ( 7) CCTGTCTCTACTAAAAATACAAAAAATTAAC 1 chr1:219994640-219994740 ( 70) CCTGTCTCTACTAAAAATGCAAAAAATTAGC 1 chrX:111310050-111310150 ( 15) CTCGTCTCTACTAAAAATACAAAAAATTAGC 1 chr2:32481484-32481584 ( 6) CCCGTCTCTACTAAAAATAGAAAAAATTAGC 1 chr6:139491925-139492025 ( 8) CCGGTCTCTACTAAAAATACAAAAAATTAGC 1 chr9:129018612-129018712 ( 9) CTCATCTCTACTAAAAATACAAAAAATTAGC 1 chr2:39205480-39205580 ( 1) CCCGTCTCTACTAAAAATAGAAAAAATTAAC 1 chr7:141404024-141404124 ( 2) CCCATCTCTACTAAAAATACAAAATATTAGC 1 chr12:120128835-12012893 ( 70) CCCGTCTCTACTAAAAATACAAAAAAATTAG 1 chr6:137419295-137419395 ( 22) CCCGTCTCTACTAAAAATACAAAAAAATTAG 1 chr11:19759090-19759190 ( 61) CCCGTCTCTACTAAAAATACAAAAAAATTAG 1 chr13:22723569-22723669 ( 61) CCCGTCTCTACTAAAAATACAAAAAAATTAG 1 chr6:1968979-1969079 ( 2) CCCATCTCTACTAAAAATACAAAAAAATTAG 1 chr5:99909767-99909867 ( 16) CCCATCTCTACTAAAAATACAAAAAAATTAG 1 chr1:36009929-36010029 ( 69) CCTGTCTCTACTAAAAATACAAAAAAATTAG 1 chr2:121302741-121302841 ( 5) TCCATCTCTACTAAAAATACAAAAAATAAGC 1 chr9:119959087-119959187 ( 4) CCCGTCTCTACTAAAAATGCAAAAAAAAAAA 1 chr2:139276187-139276287 ( 14) CCCGTCTCTACTAAAAATACAAAAAAAAACA 1 chr4:1442888-1442988 ( 70) CCCATCTCTACTAAAAATACAAAAAATAATT 1 chr8:20827012-20827112 ( 67) CCTGTCTCTACTAAAAATACAAAAAAAATTA 1 chr6:56030632-56030732 ( 1) CCTGTCTCTACTAAAAATACAAAAAAAATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 35046 bayes= 9.45105 E= 7.8e-581 -1229 189 -1229 -355 -1229 186 -1229 -256 -1229 160 -372 -39 -10 -1229 156 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 209 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 -1229 209 161 -1229 8 -1229 -1229 186 -272 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 206 -1229 -1229 -355 209 -1229 -1229 -1229 -10 -1229 -1229 173 -97 -1229 -1229 190 180 -1229 -1229 -39 -24 -372 144 -197 -156 152 -92 -355 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 50 E= 7.8e-581 0.000000 0.980000 0.000000 0.020000 0.000000 0.960000 0.000000 0.040000 0.000000 0.800000 0.020000 0.180000 0.220000 0.000000 0.780000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.720000 0.000000 0.280000 0.000000 0.000000 0.960000 0.040000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 0.220000 0.000000 0.000000 0.780000 0.120000 0.000000 0.000000 0.880000 0.820000 0.000000 0.000000 0.180000 0.200000 0.020000 0.720000 0.060000 0.080000 0.760000 0.140000 0.020000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGTCTCTACTAAAAATACAAAAAATTAGC MEME-1 regular expression -------------------------------------------------------------------------------- CCC[GA]TCTCTACTAAAAAT[AG]CAAAAAA[TA]TA[GA]C -------------------------------------------------------------------------------- Time 758.25 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 width = 31 sites = 50 llr = 1972 E-value = 8.9e-600 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::aaa::::2:::::a1:aaaaa2729aaaa pos.-specific C :::::aaa9::a:a::9::::::::81:::: probability G :a:::::::8::::::::::::::2:::::: matrix T a:::::::1:a:a:a::a:::::81:::::: bits 2.1 * * * * * * ***** *** 1.9 ***** * ****** ****** **** 1.7 ******** ************* **** 1.5 ********* ************** ***** Relative 1.3 ************************ ****** Entropy 1.0 ************************ ****** (56.9 bits) 0.8 ******************************* 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel TGAAACCCCGTCTCTACTAAAAATACAAAAA consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr14:82205874-82205974 - 68 1.11e-19 AG TGAAACCCCGTCTCTACTAAAAATACAAAAA ATTAGCCGGG chr6:25500765-25500865 - 68 1.11e-19 AG TGAAACCCCGTCTCTACTAAAAATACAAAAA AAAAATAGCC chr10:125863450-12586355 - 69 1.11e-19 G TGAAACCCCGTCTCTACTAAAAATACAAAAA AAATTAGCTG chr4:26598393-26598493 - 70 1.11e-19 . TGAAACCCCGTCTCTACTAAAAATACAAAAA ATTAGCTGGG chr3:153294488-153294588 - 61 1.11e-19 CTAAAACGA TGAAACCCCGTCTCTACTAAAAATACAAAAA ACCAGCCAAG chr8:102944936-102945036 - 69 1.11e-19 G TGAAACCCCGTCTCTACTAAAAATACAAAAA GAAATTAGCC chr4:120896692-120896792 - 65 1.11e-19 CACGA TGAAACCCCGTCTCTACTAAAAATACAAAAA ATTAGCCGGG chr2:6969760-6969860 - 70 1.11e-19 . TGAAACCCCGTCTCTACTAAAAATACAAAAA TTAGCCGGGC chr1:8731826-8731926 - 58 1.11e-19 GCTAACACAG TGAAACCCCGTCTCTACTAAAAATACAAAAA AATTAGCCGG chr12:112378761-11237886 + 2 1.11e-19 g tgaaaccccgtctctactaaaaatacaaaaa ttagctgggt chr13:67697717-67697817 + 2 1.11e-19 g tgaaaccccgtctctactaaaaatacaaaaa aattagccag chr2:74024935-74025035 + 4 1.11e-19 cag tgaaaccccgtctctactaaaaatacaaaaa agttagccgg chrX:52798733-52798833 + 4 1.11e-19 cga tgaaaccccgtctctactaaaaatacaaaaa attagccagg chr8:106757202-106757302 - 60 1.11e-19 GCTAACACAG TGAAACCCCGTCTCTACTAAAAATACAAAAA CAAAATTAGC chr14:37739881-37739981 + 3 1.11e-19 ag tgaaaccccgtctctactaaaaatacaaaaa aattacccag chrX:29534686-29534786 + 2 2.11e-19 g tgaaaccccatctctactaaaaatacaaaaa aattagccgg chr12:3967131-3967231 + 4 2.11e-19 cgg tgaaaccccatctctactaaaaatacaaaaa aaaaaaaaaa chr2:215217933-215218033 - 55 2.11e-19 GCTAACACAG TGAAACCCCATCTCTACTAAAAATACAAAAA TAGTCCCAGC chr5:132537846-132537946 + 8 2.11e-19 aacatgg tgaaaccccatctctactaaaaatacaaaaa aattagccag chr1:14465118-14465218 + 1 2.11e-19 . tgaaaccccatctctactaaaaatacaaaaa attggccagg chr6:134656753-134656853 + 3 2.11e-19 gg tgaaaccccatctctactaaaaatacaaaaa attagccagg chr5:160124328-160124428 + 10 2.11e-19 ctaacatgg tgaaaccccatctctactaaaaatacaaaaa attagccagg chr12:111622106-11162220 - 67 2.11e-19 CAG TGAAACCCCATCTCTACTAAAAATACAAAAA TTAGCCGGGC chr3:109450844-109450944 + 2 4.35e-19 g tgaaaccccgtctctactaaaaatgcaaaaa attagccagg chr2:203032376-203032476 + 29 4.35e-19 gctaacacgg tgaaaccccgtctctactaaaaatgcaaaaa aagattagcc chr2:203210381-203210481 + 2 4.35e-19 g tgaaaccccgtctctactaaaaatgcaaaaa aagattagct chr12:14215106-14215206 + 2 4.35e-19 g tgaaaccccgtctctactaaaaatgcaaaaa accagacagg chr9:39148526-39148626 - 69 4.35e-19 G TGAAACCCCGTCTCTACTAAAAATGCAAAAA ATTAGCCAGG chr5:52912754-52912854 - 66 4.35e-19 ACGG TGAAACCCCGTCTCTACTAAAAATGCAAAAA ATTAGCCGGG chr10:55678731-55678831 - 69 8.47e-19 G TGAAACCCTGTCTCTACTAAAAATACAAAAA ATTAGCCAGG chr6:2239689-2239789 - 62 8.47e-19 TAACATAG TGAAACCCTGTCTCTACTAAAAATACAAAAA AATTAGCTGG chr1:36246560-36246660 + 11 8.47e-19 gctaacatgg tgaaaccctgtctctactaaaaatacaaaaa attagccggg chr13:89718507-89718607 + 9 8.47e-19 taacacgg tgaaaccccatctctactaaaaataaaaaaa aaaattagcc chr8:5583965-5584065 - 69 8.47e-19 G TGAAACCCTGTCTCTACTAAAAATACAAAAA ATAAGCCAGG chr6:42329708-42329808 + 4 1.08e-18 tgg tgaaaccccatctctactaaaaatgcaaaaa attagccggg chr2:61168871-61168971 - 63 1.08e-18 AACAGGG TGAAACCCCATCTCTACTAAAAATGCAAAAA TTAGCCGGGC chr6:33230395-33230495 + 6 1.08e-18 cgcgg tgaaaccccatctctactaaaaatgcaaaaa aattagccgg chr6:53576464-53576564 + 10 1.49e-18 ctaacatgg tgaaaccccgtctctactaaaaaaaaaaaaa ttagccaggc chr9:61962019-61962119 + 6 1.49e-18 cacgg tgaaaccccgtctctactaaaaaaaaaaaaa aaaaaattag chr1:156028668-156028768 - 69 2.02e-18 G TGAAATCCCGTCTCTACTAAAAATACAAAAA AATTAGCCGG chr12:32046271-32046371 - 63 4.78e-18 AACACAG TGAAACCCCGTCTCTACTAAAAATACAAAAG AAATTAGCCA chr1:35813127-35813227 + 2 1.08e-17 g tgaaatcctgtctctactaaaaatacaaaaa attagccggg chr3:141922685-141922785 + 2 1.08e-17 g tgaaaccccgtctctactaaaaattacaaaa aattagctgg chr1:225697925-225698025 + 5 2.74e-17 actg tgaaaccccgtctctactaaaaaatacaaaa aattagccgg chr5:59702129-59702229 - 66 2.74e-17 GGTG TGAAACCCCGTCTCTACTAAAAAATACAAAA AATTAGCCGG chr7:76345185-76345285 - 70 2.74e-17 . TGAAACCCCGTCTCTACTAAAAAATACAAAA AATTAGCTGG chr11:67141384-67141484 + 2 2.74e-17 g tgaaaccccgtctctactaaaaaatacaaaa aataagccag chr8:6309353-6309453 - 65 1.92e-16 CACGG TGAAACCCCGTCTCTAATAAAAAATATAAAA AAGTAGCCAG chr7:34686911-34686985 + 36 5.30e-15 ggcgacagag tgagactccgtctcaaaaaaaaaaaaaaaaa aaaagaaa chr2:112354003-112354078 + 42 5.30e-15 ggtgacagag tgagactccgtctcaaaaaaaaaaaaaaaaa aaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:82205874-82205974 1.1e-19 67_[-2]_2 chr6:25500765-25500865 1.1e-19 67_[-2]_2 chr10:125863450-12586355 1.1e-19 68_[-2]_1 chr4:26598393-26598493 1.1e-19 69_[-2] chr3:153294488-153294588 1.1e-19 60_[-2]_9 chr8:102944936-102945036 1.1e-19 68_[-2]_1 chr4:120896692-120896792 1.1e-19 64_[-2]_5 chr2:6969760-6969860 1.1e-19 69_[-2] chr1:8731826-8731926 1.1e-19 57_[-2]_12 chr12:112378761-11237886 1.1e-19 1_[+2]_68 chr13:67697717-67697817 1.1e-19 1_[+2]_68 chr2:74024935-74025035 1.1e-19 3_[+2]_66 chrX:52798733-52798833 1.1e-19 3_[+2]_66 chr8:106757202-106757302 1.1e-19 59_[-2]_10 chr14:37739881-37739981 1.1e-19 2_[+2]_67 chrX:29534686-29534786 2.1e-19 1_[+2]_68 chr12:3967131-3967231 2.1e-19 3_[+2]_66 chr2:215217933-215218033 2.1e-19 54_[-2]_15 chr5:132537846-132537946 2.1e-19 7_[+2]_62 chr1:14465118-14465218 2.1e-19 [+2]_69 chr6:134656753-134656853 2.1e-19 2_[+2]_67 chr5:160124328-160124428 2.1e-19 9_[+2]_60 chr12:111622106-11162220 2.1e-19 66_[-2]_3 chr3:109450844-109450944 4.4e-19 1_[+2]_68 chr2:203032376-203032476 4.4e-19 28_[+2]_41 chr2:203210381-203210481 4.4e-19 1_[+2]_68 chr12:14215106-14215206 4.4e-19 1_[+2]_68 chr9:39148526-39148626 4.4e-19 68_[-2]_1 chr5:52912754-52912854 4.4e-19 65_[-2]_4 chr10:55678731-55678831 8.5e-19 68_[-2]_1 chr6:2239689-2239789 8.5e-19 61_[-2]_8 chr1:36246560-36246660 8.5e-19 10_[+2]_59 chr13:89718507-89718607 8.5e-19 8_[+2]_61 chr8:5583965-5584065 8.5e-19 68_[-2]_1 chr6:42329708-42329808 1.1e-18 3_[+2]_66 chr2:61168871-61168971 1.1e-18 62_[-2]_7 chr6:33230395-33230495 1.1e-18 5_[+2]_64 chr6:53576464-53576564 1.5e-18 9_[+2]_60 chr9:61962019-61962119 1.5e-18 5_[+2]_64 chr1:156028668-156028768 2e-18 68_[-2]_1 chr12:32046271-32046371 4.8e-18 62_[-2]_7 chr1:35813127-35813227 1.1e-17 1_[+2]_68 chr3:141922685-141922785 1.1e-17 1_[+2]_68 chr1:225697925-225698025 2.7e-17 4_[+2]_65 chr5:59702129-59702229 2.7e-17 65_[-2]_4 chr7:76345185-76345285 2.7e-17 69_[-2] chr11:67141384-67141484 2.7e-17 1_[+2]_68 chr8:6309353-6309453 1.9e-16 64_[-2]_5 chr7:34686911-34686985 5.3e-15 35_[+2]_8 chr2:112354003-112354078 5.3e-15 41_[+2]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAAACCCCGTCTCTACTAAAAATACAAAAA width=31 seqs=50 chr14:82205874-82205974 ( 68) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr6:25500765-25500865 ( 68) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr10:125863450-12586355 ( 69) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr4:26598393-26598493 ( 70) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr3:153294488-153294588 ( 61) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr8:102944936-102945036 ( 69) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr4:120896692-120896792 ( 65) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr2:6969760-6969860 ( 70) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr1:8731826-8731926 ( 58) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr12:112378761-11237886 ( 2) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr13:67697717-67697817 ( 2) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr2:74024935-74025035 ( 4) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chrX:52798733-52798833 ( 4) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr8:106757202-106757302 ( 60) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chr14:37739881-37739981 ( 3) TGAAACCCCGTCTCTACTAAAAATACAAAAA 1 chrX:29534686-29534786 ( 2) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr12:3967131-3967231 ( 4) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr2:215217933-215218033 ( 55) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr5:132537846-132537946 ( 8) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr1:14465118-14465218 ( 1) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr6:134656753-134656853 ( 3) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr5:160124328-160124428 ( 10) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr12:111622106-11162220 ( 67) TGAAACCCCATCTCTACTAAAAATACAAAAA 1 chr3:109450844-109450944 ( 2) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr2:203032376-203032476 ( 29) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr2:203210381-203210481 ( 2) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr12:14215106-14215206 ( 2) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr9:39148526-39148626 ( 69) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr5:52912754-52912854 ( 66) TGAAACCCCGTCTCTACTAAAAATGCAAAAA 1 chr10:55678731-55678831 ( 69) TGAAACCCTGTCTCTACTAAAAATACAAAAA 1 chr6:2239689-2239789 ( 62) TGAAACCCTGTCTCTACTAAAAATACAAAAA 1 chr1:36246560-36246660 ( 11) TGAAACCCTGTCTCTACTAAAAATACAAAAA 1 chr13:89718507-89718607 ( 9) TGAAACCCCATCTCTACTAAAAATAAAAAAA 1 chr8:5583965-5584065 ( 69) TGAAACCCTGTCTCTACTAAAAATACAAAAA 1 chr6:42329708-42329808 ( 4) TGAAACCCCATCTCTACTAAAAATGCAAAAA 1 chr2:61168871-61168971 ( 63) TGAAACCCCATCTCTACTAAAAATGCAAAAA 1 chr6:33230395-33230495 ( 6) TGAAACCCCATCTCTACTAAAAATGCAAAAA 1 chr6:53576464-53576564 ( 10) TGAAACCCCGTCTCTACTAAAAAAAAAAAAA 1 chr9:61962019-61962119 ( 6) TGAAACCCCGTCTCTACTAAAAAAAAAAAAA 1 chr1:156028668-156028768 ( 69) TGAAATCCCGTCTCTACTAAAAATACAAAAA 1 chr12:32046271-32046371 ( 63) TGAAACCCCGTCTCTACTAAAAATACAAAAG 1 chr1:35813127-35813227 ( 2) TGAAATCCTGTCTCTACTAAAAATACAAAAA 1 chr3:141922685-141922785 ( 2) TGAAACCCCGTCTCTACTAAAAATTACAAAA 1 chr1:225697925-225698025 ( 5) TGAAACCCCGTCTCTACTAAAAAATACAAAA 1 chr5:59702129-59702229 ( 66) TGAAACCCCGTCTCTACTAAAAAATACAAAA 1 chr7:76345185-76345285 ( 70) TGAAACCCCGTCTCTACTAAAAAATACAAAA 1 chr11:67141384-67141484 ( 2) TGAAACCCCGTCTCTACTAAAAAATACAAAA 1 chr8:6309353-6309453 ( 65) TGAAACCCCGTCTCTAATAAAAAATATAAAA 1 chr7:34686911-34686985 ( 36) TGAGACTCCGTCTCAAAAAAAAAAAAAAAAA 1 chr2:112354003-112354078 ( 42) TGAGACTCCGTCTCAAAAAAAAAAAAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 35046 bayes= 11.0607 E= 8.9e-600 -1229 -1229 -1229 209 -1229 -1229 192 -1229 209 -1229 -1229 -1229 203 -1229 -272 -1229 209 -1229 -1229 -1229 -1229 186 -1229 -256 -1229 186 -1229 -256 -1229 192 -1229 -1229 -1229 177 -1229 -124 3 -1229 152 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -256 -1229 -1229 203 209 -1229 -1229 -1229 -197 183 -1229 -1229 -256 -1229 -1229 203 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 -39 -1229 -1229 180 157 -1229 -56 -97 -10 156 -1229 -1229 190 -140 -1229 -355 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 206 -1229 -372 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 50 E= 8.9e-600 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 0.960000 0.000000 0.040000 0.000000 1.000000 0.000000 0.000000 0.000000 0.900000 0.000000 0.100000 0.240000 0.000000 0.760000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.040000 0.000000 0.000000 0.960000 1.000000 0.000000 0.000000 0.000000 0.060000 0.940000 0.000000 0.000000 0.040000 0.000000 0.000000 0.960000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.180000 0.000000 0.000000 0.820000 0.700000 0.000000 0.180000 0.120000 0.220000 0.780000 0.000000 0.000000 0.880000 0.100000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAAACCCCGTCTCTACTAAAAATACAAAAA MEME-2 regular expression -------------------------------------------------------------------------------- TGAAACCCC[GA]TCTCTACTAAAAATA[CA]AAAAA -------------------------------------------------------------------------------- Time 1491.00 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 width = 31 sites = 50 llr = 1761 E-value = 3.2e-508 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::a::aaaaa:7:aaaaaa517521231 pos.-specific C :a:a::a::::::::9::::::::::583:: probability G ::::::::::::::3::::::::::53:469 matrix T a:a:a::a:::::a::::::::593::11:: bits 2.1 * * **** *** 1.9 ************** ****** 1.7 ************** ****** 1.5 ************** ******* * * Relative 1.3 ************** ******* ** * Entropy 1.0 ************************* * (50.8 bits) 0.8 ************************* * ** 0.6 ************************** * ** 0.4 **************************** ** 0.2 ******************************* 0.0 ------------------------------- Multilevel TCTCTACTAAAAATACAAAAAATTAGCCGGG consensus G A TAG CA sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr9:40200832-40200932 + 3 4.22e-19 cg tctctactaaaaatacaaaaaattagccggg tgtggtggcc chr11:80215519-80215619 + 7 4.22e-19 accctg tctctactaaaaatacaaaaaattagccggg catggtggcg chr9:67836790-67836890 + 3 4.22e-19 cg tctctactaaaaatacaaaaaattagccggg cgtggtggcc chr11:84445634-84445734 + 9 4.22e-19 aaaccccg tctctactaaaaatacaaaaaattagccggg tgtggtagcg chr12:98768452-98768552 + 11 4.22e-19 tgaaacccgg tctctactaaaaatacaaaaaattagccggg cgtgctggcg chr9:64347049-64347149 + 3 4.22e-19 cg tctctactaaaaatacaaaaaattagccggg tgtggtggcc chr3:78859800-78859900 + 12 4.22e-19 gtgaaacccg tctctactaaaaatacaaaaaattagccggg cgtggtggcg chr10:18074242-18074342 + 9 1.82e-18 aaaccccg tctctactaaaaatacaaaaaattagccgag cgtagtggtg chr15:20347115-20347215 - 61 1.82e-18 GAAGCCCCA TCTCTACTAAAAATACAAAAAATTAGCCGAG TGTGGTGGCA chr2:26823213-26823313 + 17 2.22e-18 tgaaaaccca tctctactaaaaatacaaaaaattagccagg cgtggtggca chr4:84168672-84168772 + 1 2.22e-18 . tctctactaaaaatacaaaaaattagccagg cgtagtggtg chr14:46964919-46965019 - 62 4.27e-18 AAACCCCG TCTCTACTAAAAATGCAAAAAATTAGCCGGG CGTGGTGGCG chr14:71105553-71105653 - 54 4.27e-18 TGAAACCCTG TCTCTACTAAAAATGCAAAAAAATAGCCGGG CGTGGTGGCA chr15:41704377-41704477 + 8 6.21e-18 aaccctg tctctactaaaaatacaaaaaattagccaag agtggtggtg chr2:47954125-47954225 + 7 9.82e-18 accctg tctctactaaaaatacaaaaaaattagccgg gcgcggtggc chr1:28511389-28511489 - 50 9.82e-18 TGAAACCCCT TCTCTACTAAAAATACAAAAAAATTAGCCGG GTGTGGCGGC chr3:106557866-106557966 - 65 1.16e-17 CTCCA TCTCTACTAAAAATGCAAAAAATTAGCCAGG TGTAGTGGCG chr6:43822021-43822121 + 8 1.31e-17 aacccca tctctactaaaaatacaaaaaattagctggg cgtggtggtg chr10:35249912-35250012 + 10 1.31e-17 gaaaccccg tctctactaaaaatacaaaaaattagctggg catggtggcg chr8:100968192-100968292 - 66 1.31e-17 TCCG TCTCTACTAAAAATACAAAAAATTAGCTGGG CGTGTTGGCG chr10:36609967-36610067 - 66 1.80e-17 CCCG TCTCTACTAAAAATACAAAAAAATTAGCCAG GCGTGGTGGC chr1:165264921-165265021 + 9 2.74e-17 aaaccctg tctctactaaaaatgcaaaaaaattagccgg gcatggtggc chr4:108871317-108871417 - 59 2.74e-17 TGAAACCCTG TCTCTACTAAAAATGCAAAAAAATTAGCCGG GCGTAGTGGC chr4:35354740-35354840 + 8 2.74e-17 aacccag tctctactaaaaatgcaaaaaatttagccgg gtgtggcggt chr8:25402294-25402394 - 61 3.35e-17 GAAACCTCG TCTCTACTAAAAATGCAAAAAAATAGCTGGG CATGGTGGCG chr2:20127386-20127486 - 63 3.35e-17 AACCCCG TCTCTACTAAAAATGCAAAAAATTAGCTGGG CGTGGTGGCG chr10:96965014-96965114 - 60 4.44e-17 TGAAACTCCC TCTCTACTAAAAATGCAAAAAAATTAGCCAG GCGTGGTGGC chr8:15385900-15386000 - 62 4.44e-17 AAACCCCG TCTCTACTAAAAATGCAAAAAAATTAGCCAG GCATGGTGGC chr8:4668466-4668566 - 70 4.44e-17 . TCTCTACTAAAAATGCAAAAAAATTAGCCAG GCGTGGTGGC chr4:2970673-2970773 - 58 4.44e-17 TGAAACTCCA TCTCTACTAAAAATGCAAAAAAATTAGCCAG GCATGGCGGC chr9:87365319-87365419 + 8 4.44e-17 aaccctg tctctactaaaaatgcaaaaaaattagccag gcatggtggc chr2:72380357-72380457 + 20 8.28e-17 tgaaacccaa tctctactaaaaatgcaaaaaaattagctgg gcgtggtggc chr1:231246887-231246987 + 17 1.18e-16 tgaaacctcg tctctactataaatacaaaaaattagccggg catggtggcg chr2:126904912-126905012 + 6 1.29e-16 ccccg tctctactaaaaatacaaaacattagccggg cgtggtggca chr1:238243926-238244026 + 7 2.02e-16 accctg tctctactaaaaatacaaaaacttaggcggg cgtggtggtg chr6:42019997-42020097 + 5 2.21e-16 cccg tctctactaaaaatgcaaaaaaattagccga gcatggtggc chr11:9345150-9345250 + 10 3.42e-16 gacaccccg actctactaaaaatacaaaaaaataagccag gagtggtggc chr9:11695307-11695407 + 5 3.72e-16 cctg tctctactaaaaatgtaaaaaattagccagg catggtggtg chr7:64177392-64177492 - 65 8.44e-16 CCCTG TCTCCACTAAAAATACAAAAAATTATCCGGG CGTGGTGGTG chr8:22940484-22940584 - 62 9.05e-16 AAACCCCG TCTCTACTGAAAATACAAAAAAATTAACCAG GCGTGGTGGT chr6:80626160-80626260 + 13 9.05e-16 tggcacccca tctctattaaaaatacaaaaaaattagctgg gcatggtggt chr12:118254757-11825485 - 63 9.70e-16 AACCCCG TCTCTACTAAAAATACAAAAAAAAAAATTAG CCAGGCGTGG chr7:75871197-75871297 + 4 9.70e-16 cca tctctactaaaaatacaaaaaaaaaaattag ctgggcgttg chr2:181418864-181418964 - 64 1.11e-15 ACCCTG TCTCTACTAAAAATAAAAAAAATTACCCAGG TGTGGTGGCA chr3:104863386-104863486 + 7 2.27e-15 acccca tctcacctaaaaatacaaaaaattaaccggg cgtggtggcg chr12:22834190-22834290 + 1 3.32e-15 . tctctactaaaaatacaaaaaaaaaaaaaaa aaaaaaaaat chr12:60556010-60556110 - 66 3.32e-15 CCCG TCTCTACTAAAAATACAAAAAAAAAAAAAAA AAAAAAATTA chr4:10620820-10620920 + 10 7.56e-15 gaagccccg tctctactaaaaatacaaaaaaaaaaaaaat tagcccggcg chr8:103424023-103424123 - 62 4.68e-14 AAACCCTG TCTCTACTAAAAATAAAAATAAATAAAAAAA TTAGCCGGGA chrX:17880008-17880108 + 2 4.68e-14 g tctctactaaaaatacaaaaaaaattagccg ggcgtagtgg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:40200832-40200932 4.2e-19 2_[+3]_67 chr11:80215519-80215619 4.2e-19 6_[+3]_63 chr9:67836790-67836890 4.2e-19 2_[+3]_67 chr11:84445634-84445734 4.2e-19 8_[+3]_61 chr12:98768452-98768552 4.2e-19 10_[+3]_59 chr9:64347049-64347149 4.2e-19 2_[+3]_67 chr3:78859800-78859900 4.2e-19 11_[+3]_58 chr10:18074242-18074342 1.8e-18 8_[+3]_61 chr15:20347115-20347215 1.8e-18 60_[-3]_9 chr2:26823213-26823313 2.2e-18 16_[+3]_53 chr4:84168672-84168772 2.2e-18 [+3]_69 chr14:46964919-46965019 4.3e-18 61_[-3]_8 chr14:71105553-71105653 4.3e-18 53_[-3]_16 chr15:41704377-41704477 6.2e-18 7_[+3]_62 chr2:47954125-47954225 9.8e-18 6_[+3]_63 chr1:28511389-28511489 9.8e-18 49_[-3]_20 chr3:106557866-106557966 1.2e-17 64_[-3]_5 chr6:43822021-43822121 1.3e-17 7_[+3]_62 chr10:35249912-35250012 1.3e-17 9_[+3]_60 chr8:100968192-100968292 1.3e-17 65_[-3]_4 chr10:36609967-36610067 1.8e-17 65_[-3]_4 chr1:165264921-165265021 2.7e-17 8_[+3]_61 chr4:108871317-108871417 2.7e-17 58_[-3]_11 chr4:35354740-35354840 2.7e-17 7_[+3]_62 chr8:25402294-25402394 3.3e-17 60_[-3]_9 chr2:20127386-20127486 3.3e-17 62_[-3]_7 chr10:96965014-96965114 4.4e-17 59_[-3]_10 chr8:15385900-15386000 4.4e-17 61_[-3]_8 chr8:4668466-4668566 4.4e-17 69_[-3] chr4:2970673-2970773 4.4e-17 57_[-3]_12 chr9:87365319-87365419 4.4e-17 7_[+3]_62 chr2:72380357-72380457 8.3e-17 19_[+3]_50 chr1:231246887-231246987 1.2e-16 16_[+3]_53 chr2:126904912-126905012 1.3e-16 5_[+3]_64 chr1:238243926-238244026 2e-16 6_[+3]_63 chr6:42019997-42020097 2.2e-16 4_[+3]_65 chr11:9345150-9345250 3.4e-16 9_[+3]_60 chr9:11695307-11695407 3.7e-16 4_[+3]_65 chr7:64177392-64177492 8.4e-16 64_[-3]_5 chr8:22940484-22940584 9e-16 61_[-3]_8 chr6:80626160-80626260 9e-16 12_[+3]_57 chr12:118254757-11825485 9.7e-16 62_[-3]_7 chr7:75871197-75871297 9.7e-16 3_[+3]_66 chr2:181418864-181418964 1.1e-15 63_[-3]_6 chr3:104863386-104863486 2.3e-15 6_[+3]_63 chr12:22834190-22834290 3.3e-15 [+3]_69 chr12:60556010-60556110 3.3e-15 65_[-3]_4 chr4:10620820-10620920 7.6e-15 9_[+3]_60 chr8:103424023-103424123 4.7e-14 61_[-3]_8 chrX:17880008-17880108 4.7e-14 1_[+3]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTCTACTAAAAATACAAAAAAWTARSCSRG width=31 seqs=50 chr9:40200832-40200932 ( 3) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr11:80215519-80215619 ( 7) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr9:67836790-67836890 ( 3) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr11:84445634-84445734 ( 9) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr12:98768452-98768552 ( 11) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr9:64347049-64347149 ( 3) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr3:78859800-78859900 ( 12) TCTCTACTAAAAATACAAAAAATTAGCCGGG 1 chr10:18074242-18074342 ( 9) TCTCTACTAAAAATACAAAAAATTAGCCGAG 1 chr15:20347115-20347215 ( 61) TCTCTACTAAAAATACAAAAAATTAGCCGAG 1 chr2:26823213-26823313 ( 17) TCTCTACTAAAAATACAAAAAATTAGCCAGG 1 chr4:84168672-84168772 ( 1) TCTCTACTAAAAATACAAAAAATTAGCCAGG 1 chr14:46964919-46965019 ( 62) TCTCTACTAAAAATGCAAAAAATTAGCCGGG 1 chr14:71105553-71105653 ( 54) TCTCTACTAAAAATGCAAAAAAATAGCCGGG 1 chr15:41704377-41704477 ( 8) TCTCTACTAAAAATACAAAAAATTAGCCAAG 1 chr2:47954125-47954225 ( 7) TCTCTACTAAAAATACAAAAAAATTAGCCGG 1 chr1:28511389-28511489 ( 50) TCTCTACTAAAAATACAAAAAAATTAGCCGG 1 chr3:106557866-106557966 ( 65) TCTCTACTAAAAATGCAAAAAATTAGCCAGG 1 chr6:43822021-43822121 ( 8) TCTCTACTAAAAATACAAAAAATTAGCTGGG 1 chr10:35249912-35250012 ( 10) TCTCTACTAAAAATACAAAAAATTAGCTGGG 1 chr8:100968192-100968292 ( 66) TCTCTACTAAAAATACAAAAAATTAGCTGGG 1 chr10:36609967-36610067 ( 66) TCTCTACTAAAAATACAAAAAAATTAGCCAG 1 chr1:165264921-165265021 ( 9) TCTCTACTAAAAATGCAAAAAAATTAGCCGG 1 chr4:108871317-108871417 ( 59) TCTCTACTAAAAATGCAAAAAAATTAGCCGG 1 chr4:35354740-35354840 ( 8) TCTCTACTAAAAATGCAAAAAATTTAGCCGG 1 chr8:25402294-25402394 ( 61) TCTCTACTAAAAATGCAAAAAAATAGCTGGG 1 chr2:20127386-20127486 ( 63) TCTCTACTAAAAATGCAAAAAATTAGCTGGG 1 chr10:96965014-96965114 ( 60) TCTCTACTAAAAATGCAAAAAAATTAGCCAG 1 chr8:15385900-15386000 ( 62) TCTCTACTAAAAATGCAAAAAAATTAGCCAG 1 chr8:4668466-4668566 ( 70) TCTCTACTAAAAATGCAAAAAAATTAGCCAG 1 chr4:2970673-2970773 ( 58) TCTCTACTAAAAATGCAAAAAAATTAGCCAG 1 chr9:87365319-87365419 ( 8) TCTCTACTAAAAATGCAAAAAAATTAGCCAG 1 chr2:72380357-72380457 ( 20) TCTCTACTAAAAATGCAAAAAAATTAGCTGG 1 chr1:231246887-231246987 ( 17) TCTCTACTATAAATACAAAAAATTAGCCGGG 1 chr2:126904912-126905012 ( 6) TCTCTACTAAAAATACAAAACATTAGCCGGG 1 chr1:238243926-238244026 ( 7) TCTCTACTAAAAATACAAAAACTTAGGCGGG 1 chr6:42019997-42020097 ( 5) TCTCTACTAAAAATGCAAAAAAATTAGCCGA 1 chr11:9345150-9345250 ( 10) ACTCTACTAAAAATACAAAAAAATAAGCCAG 1 chr9:11695307-11695407 ( 5) TCTCTACTAAAAATGTAAAAAATTAGCCAGG 1 chr7:64177392-64177492 ( 65) TCTCCACTAAAAATACAAAAAATTATCCGGG 1 chr8:22940484-22940584 ( 62) TCTCTACTGAAAATACAAAAAAATTAACCAG 1 chr6:80626160-80626260 ( 13) TCTCTATTAAAAATACAAAAAAATTAGCTGG 1 chr12:118254757-11825485 ( 63) TCTCTACTAAAAATACAAAAAAAAAAATTAG 1 chr7:75871197-75871297 ( 4) TCTCTACTAAAAATACAAAAAAAAAAATTAG 1 chr2:181418864-181418964 ( 64) TCTCTACTAAAAATAAAAAAAATTACCCAGG 1 chr3:104863386-104863486 ( 7) TCTCACCTAAAAATACAAAAAATTAACCGGG 1 chr12:22834190-22834290 ( 1) TCTCTACTAAAAATACAAAAAAAAAAAAAAA 1 chr12:60556010-60556110 ( 66) TCTCTACTAAAAATACAAAAAAAAAAAAAAA 1 chr4:10620820-10620920 ( 10) TCTCTACTAAAAATACAAAAAAAAAAAAAAT 1 chr8:103424023-103424123 ( 62) TCTCTACTAAAAATAAAAATAAATAAAAAAA 1 chrX:17880008-17880108 ( 2) TCTCTACTAAAAATACAAAAAAAATTAGCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 35046 bayes= 11.374 E= 3.2e-508 -355 -1229 -1229 206 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -355 -372 -1229 203 206 -372 -1229 -1229 -1229 189 -1229 -355 -1229 -1229 -1229 209 206 -1229 -372 -1229 206 -1229 -1229 -355 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 -1229 209 153 -1229 27 -1229 -256 183 -1229 -355 209 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 206 -1229 -1229 -355 206 -372 -1229 -1229 206 -372 -1229 -1229 103 -1229 -1229 114 -97 -1229 -1229 190 153 -1229 -1229 44 97 -372 86 -256 -56 98 27 -1229 -156 152 -372 -75 -24 18 67 -156 53 -372 127 -1229 -156 -1229 177 -355 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 50 E= 3.2e-508 0.020000 0.000000 0.000000 0.980000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.020000 0.020000 0.000000 0.960000 0.980000 0.020000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 0.000000 0.000000 1.000000 0.980000 0.000000 0.020000 0.000000 0.980000 0.000000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.680000 0.000000 0.320000 0.000000 0.040000 0.940000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.000000 0.020000 0.980000 0.020000 0.000000 0.000000 0.980000 0.020000 0.000000 0.000000 0.480000 0.000000 0.000000 0.520000 0.120000 0.000000 0.000000 0.880000 0.680000 0.000000 0.000000 0.320000 0.460000 0.020000 0.480000 0.040000 0.160000 0.520000 0.320000 0.000000 0.080000 0.760000 0.020000 0.140000 0.200000 0.300000 0.420000 0.080000 0.340000 0.020000 0.640000 0.000000 0.080000 0.000000 0.900000 0.020000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCTACTAAAAATACAAAAAAWTARSCSRG MEME-3 regular expression -------------------------------------------------------------------------------- TCTCTACTAAAAAT[AG]CAAAAAA[TA]T[AT][GA][CG]C[GCA][GA]G -------------------------------------------------------------------------------- Time 2196.49 secs. ******************************************************************************** ******************************************************************************** MOTIF TTCACGCCATTCTCCTGCCTCA MEME-4 width = 22 sites = 50 llr = 1498 E-value = 3.4e-414 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::a::::a::::::::::::a pos.-specific C ::a:8:aa:::a:aa::aa:a: probability G :::::a::::::::::a::::: matrix T aa::2::::aa:a::a:::a:: bits 2.1 ** * *** * * * * 1.9 **** ***************** 1.7 **** ***************** 1.5 **** ***************** Relative 1.3 ********************** Entropy 1.0 ********************** (43.2 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TTCACGCCATTCTCCTGCCTCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr6:43822021-43822121 - 79 6.14e-14 . TTCACGCCATTCTCCTGCCTCA GCCTCCCAAG chr3:133502305-133502405 - 77 6.14e-14 GG TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr7:87049272-87049372 + 11 6.14e-14 gcctcccggg ttcacgccattctcctgcctca gcctcccgag chr3:33997368-33997468 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCCTCCCAAG chrX:81091845-81091945 - 52 6.14e-14 GCCTCCTGGG TTCACGCCATTCTCCTGCCTCA GCCTCCTGAG chr7:141404024-141404124 - 77 6.14e-14 GG TTCACGCCATTCTCCTGCCTCA GCCACCTGAG chr4:112684722-112684822 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr1:238243926-238244026 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCCTCCTGAG chr4:92006631-92006731 + 48 6.14e-14 gcctcccagg ttcacgccattctcctgcctca gccctcagac chr8:4668466-4668566 + 7 6.14e-14 ccctgg ttcacgccattctcctgcctca gcctccagag chr14:63717311-63717411 + 4 6.14e-14 agg ttcacgccattctcctgcctca acctcccgag chr8:133686219-133686319 + 40 6.14e-14 gcctcctggg ttcacgccattctcctgcctca gcctcctgag chr12:120128835-12012893 + 7 6.14e-14 cctggg ttcacgccattctcctgcctca gcctcctgag chr7:87698087-87698187 + 7 6.14e-14 cccggg ttcacgccattctcctgcctca gcctcccgag chr2:68753904-68754004 + 29 6.14e-14 gcctcccagg ttcacgccattctcctgcctca gcctcccaag chr2:47954125-47954225 - 79 6.14e-14 . TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr14:103472386-10347248 - 71 6.14e-14 CTCCCAGG TTCACGCCATTCTCCTGCCTCA GCCTCCTGAG chr11:99306624-99306724 - 4 6.14e-14 ACCTCCCGGG TTCACGCCATTCTCCTGCCTCA GCC chr3:106557866-106557966 + 3 6.14e-14 gg ttcacgccattctcctgcctca gcctcccaag chrX:71771439-71771539 + 7 6.14e-14 cccagg ttcacgccattctcctgcctca gcctcccaag chr1:191571244-191571344 - 53 6.14e-14 ACCTTCTGGG TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr14:80617219-80617319 + 1 6.14e-14 . ttcacgccattctcctgcctca gcctccccag chr9:15569533-15569633 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr3:149568761-149568861 + 1 6.14e-14 . ttcacgccattctcctgcctca gcctcccgag chr2:20127386-20127486 + 1 6.14e-14 . ttcacgccattctcctgcctca gcctcccaag chr2:181418864-181418964 + 2 6.14e-14 a ttcacgccattctcctgcctca gcctcccaag chr1:45749487-45749587 + 14 6.14e-14 gcctcccggg ttcacgccattctcctgcctca gcctcccgag chrX:15297011-15297111 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCCTCCCCAG chr15:30048379-30048479 - 67 6.14e-14 GCCTCCCGGG TTCACGCCATTCTCCTGCCTCA GCCTCCTGAG chrX:17880008-17880108 - 75 6.14e-14 CGGG TTCACGCCATTCTCCTGCCTCA GCCTCCCAAG chr6:7306135-7306235 + 1 6.14e-14 . ttcacgccattctcctgcctca gcctcccaag chr5:9840893-9840993 + 78 6.14e-14 gcctcccggt ttcacgccattctcctgcctca g chr6:168726838-168726938 + 19 6.14e-14 gcctcctggg ttcacgccattctcctgcctca gcctcccgac chr7:121047717-121047817 + 11 6.14e-14 gcctcctggg ttcacgccattctcctgcctca gcctccggtg chr4:117950484-117950584 - 62 6.14e-14 GCCTCCCGGG TTCACGCCATTCTCCTGCCTCA GCCTCCCCAG chr2:132932921-132933021 + 11 6.14e-14 gcctcccggg ttcacgccattctcctgcctca gcctcccgag chr3:141034513-141034613 + 12 6.14e-14 acctcccagg ttcacgccattctcctgcctca gcctcccgag chr3:65952532-65952632 - 79 6.14e-14 . TTCACGCCATTCTCCTGCCTCA GCCTCCCGAG chr8:108424541-108424641 + 22 6.14e-14 gccttctggg ttcacgccattctcctgcctca gcctcccgag chr3:104863386-104863486 - 78 6.14e-14 G TTCACGCCATTCTCCTGCCTCA GCATCCCGAG chr5:83516160-83516260 - 7 6.14e-14 ACCTCCCAGG TTCACGCCATTCTCCTGCCTCA GCCTCC chr4:77704903-77705003 + 3 1.16e-13 gg ttcatgccattctcctgcctca gcctcctgaa chr3:96253865-96253965 + 40 1.16e-13 gccttctggg ttcatgccattctcctgcctca gcctccccag chr1:219994640-219994740 + 4 1.16e-13 ggg ttcatgccattctcctgcctca gcctcccaag chr10:26094416-26094516 + 2 1.16e-13 g ttcatgccattctcctgcctca gcctccccag chr2:215217933-215218033 + 11 1.16e-13 gcctctcggg ttcatgccattctcctgcctca gcctcccaag chr7:91205785-91205885 + 3 1.16e-13 gg ttcatgccattctcctgcctca gcctcctaag chr3:166895595-166895695 + 79 1.16e-13 gcctcctggg ttcatgccattctcctgcctca chr7:138387138-138387238 + 11 1.16e-13 gcctcccggg ttcatgccattctcctgcctca gcctcccgag chr5:71196562-71196662 + 3 1.16e-13 gg ttcatgccattctcctgcctca gcctcccgag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:43822021-43822121 6.1e-14 78_[-4] chr3:133502305-133502405 6.1e-14 76_[-4]_2 chr7:87049272-87049372 6.1e-14 10_[+4]_68 chr3:33997368-33997468 6.1e-14 77_[-4]_1 chrX:81091845-81091945 6.1e-14 51_[-4]_27 chr7:141404024-141404124 6.1e-14 76_[-4]_2 chr4:112684722-112684822 6.1e-14 77_[-4]_1 chr1:238243926-238244026 6.1e-14 77_[-4]_1 chr4:92006631-92006731 6.1e-14 47_[+4]_31 chr8:4668466-4668566 6.1e-14 6_[+4]_72 chr14:63717311-63717411 6.1e-14 3_[+4]_75 chr8:133686219-133686319 6.1e-14 39_[+4]_39 chr12:120128835-12012893 6.1e-14 6_[+4]_72 chr7:87698087-87698187 6.1e-14 6_[+4]_72 chr2:68753904-68754004 6.1e-14 28_[+4]_50 chr2:47954125-47954225 6.1e-14 78_[-4] chr14:103472386-10347248 6.1e-14 70_[-4]_8 chr11:99306624-99306724 6.1e-14 3_[-4]_75 chr3:106557866-106557966 6.1e-14 2_[+4]_76 chrX:71771439-71771539 6.1e-14 6_[+4]_72 chr1:191571244-191571344 6.1e-14 52_[-4]_26 chr14:80617219-80617319 6.1e-14 [+4]_78 chr9:15569533-15569633 6.1e-14 77_[-4]_1 chr3:149568761-149568861 6.1e-14 [+4]_78 chr2:20127386-20127486 6.1e-14 [+4]_78 chr2:181418864-181418964 6.1e-14 1_[+4]_77 chr1:45749487-45749587 6.1e-14 13_[+4]_65 chrX:15297011-15297111 6.1e-14 77_[-4]_1 chr15:30048379-30048479 6.1e-14 66_[-4]_12 chrX:17880008-17880108 6.1e-14 74_[-4]_4 chr6:7306135-7306235 6.1e-14 [+4]_78 chr5:9840893-9840993 6.1e-14 77_[+4]_1 chr6:168726838-168726938 6.1e-14 18_[+4]_60 chr7:121047717-121047817 6.1e-14 10_[+4]_68 chr4:117950484-117950584 6.1e-14 61_[-4]_17 chr2:132932921-132933021 6.1e-14 10_[+4]_68 chr3:141034513-141034613 6.1e-14 11_[+4]_67 chr3:65952532-65952632 6.1e-14 78_[-4] chr8:108424541-108424641 6.1e-14 21_[+4]_57 chr3:104863386-104863486 6.1e-14 77_[-4]_1 chr5:83516160-83516260 6.1e-14 6_[-4]_72 chr4:77704903-77705003 1.2e-13 2_[+4]_76 chr3:96253865-96253965 1.2e-13 39_[+4]_39 chr1:219994640-219994740 1.2e-13 3_[+4]_75 chr10:26094416-26094516 1.2e-13 1_[+4]_77 chr2:215217933-215218033 1.2e-13 10_[+4]_68 chr7:91205785-91205885 1.2e-13 2_[+4]_76 chr3:166895595-166895695 1.2e-13 78_[+4] chr7:138387138-138387238 1.2e-13 10_[+4]_68 chr5:71196562-71196662 1.2e-13 2_[+4]_76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTCACGCCATTCTCCTGCCTCA width=22 seqs=50 chr6:43822021-43822121 ( 79) TTCACGCCATTCTCCTGCCTCA 1 chr3:133502305-133502405 ( 77) TTCACGCCATTCTCCTGCCTCA 1 chr7:87049272-87049372 ( 11) TTCACGCCATTCTCCTGCCTCA 1 chr3:33997368-33997468 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chrX:81091845-81091945 ( 52) TTCACGCCATTCTCCTGCCTCA 1 chr7:141404024-141404124 ( 77) TTCACGCCATTCTCCTGCCTCA 1 chr4:112684722-112684822 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr1:238243926-238244026 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr4:92006631-92006731 ( 48) TTCACGCCATTCTCCTGCCTCA 1 chr8:4668466-4668566 ( 7) TTCACGCCATTCTCCTGCCTCA 1 chr14:63717311-63717411 ( 4) TTCACGCCATTCTCCTGCCTCA 1 chr8:133686219-133686319 ( 40) TTCACGCCATTCTCCTGCCTCA 1 chr12:120128835-12012893 ( 7) TTCACGCCATTCTCCTGCCTCA 1 chr7:87698087-87698187 ( 7) TTCACGCCATTCTCCTGCCTCA 1 chr2:68753904-68754004 ( 29) TTCACGCCATTCTCCTGCCTCA 1 chr2:47954125-47954225 ( 79) TTCACGCCATTCTCCTGCCTCA 1 chr14:103472386-10347248 ( 71) TTCACGCCATTCTCCTGCCTCA 1 chr11:99306624-99306724 ( 4) TTCACGCCATTCTCCTGCCTCA 1 chr3:106557866-106557966 ( 3) TTCACGCCATTCTCCTGCCTCA 1 chrX:71771439-71771539 ( 7) TTCACGCCATTCTCCTGCCTCA 1 chr1:191571244-191571344 ( 53) TTCACGCCATTCTCCTGCCTCA 1 chr14:80617219-80617319 ( 1) TTCACGCCATTCTCCTGCCTCA 1 chr9:15569533-15569633 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr3:149568761-149568861 ( 1) TTCACGCCATTCTCCTGCCTCA 1 chr2:20127386-20127486 ( 1) TTCACGCCATTCTCCTGCCTCA 1 chr2:181418864-181418964 ( 2) TTCACGCCATTCTCCTGCCTCA 1 chr1:45749487-45749587 ( 14) TTCACGCCATTCTCCTGCCTCA 1 chrX:15297011-15297111 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr15:30048379-30048479 ( 67) TTCACGCCATTCTCCTGCCTCA 1 chrX:17880008-17880108 ( 75) TTCACGCCATTCTCCTGCCTCA 1 chr6:7306135-7306235 ( 1) TTCACGCCATTCTCCTGCCTCA 1 chr5:9840893-9840993 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr6:168726838-168726938 ( 19) TTCACGCCATTCTCCTGCCTCA 1 chr7:121047717-121047817 ( 11) TTCACGCCATTCTCCTGCCTCA 1 chr4:117950484-117950584 ( 62) TTCACGCCATTCTCCTGCCTCA 1 chr2:132932921-132933021 ( 11) TTCACGCCATTCTCCTGCCTCA 1 chr3:141034513-141034613 ( 12) TTCACGCCATTCTCCTGCCTCA 1 chr3:65952532-65952632 ( 79) TTCACGCCATTCTCCTGCCTCA 1 chr8:108424541-108424641 ( 22) TTCACGCCATTCTCCTGCCTCA 1 chr3:104863386-104863486 ( 78) TTCACGCCATTCTCCTGCCTCA 1 chr5:83516160-83516260 ( 7) TTCACGCCATTCTCCTGCCTCA 1 chr4:77704903-77705003 ( 3) TTCATGCCATTCTCCTGCCTCA 1 chr3:96253865-96253965 ( 40) TTCATGCCATTCTCCTGCCTCA 1 chr1:219994640-219994740 ( 4) TTCATGCCATTCTCCTGCCTCA 1 chr10:26094416-26094516 ( 2) TTCATGCCATTCTCCTGCCTCA 1 chr2:215217933-215218033 ( 11) TTCATGCCATTCTCCTGCCTCA 1 chr7:91205785-91205885 ( 3) TTCATGCCATTCTCCTGCCTCA 1 chr3:166895595-166895695 ( 79) TTCATGCCATTCTCCTGCCTCA 1 chr7:138387138-138387238 ( 11) TTCATGCCATTCTCCTGCCTCA 1 chr5:71196562-71196662 ( 3) TTCATGCCATTCTCCTGCCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 40446 bayes= 10.1486 E= 3.4e-414 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 163 -1229 -39 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 50 E= 3.4e-414 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.820000 0.000000 0.180000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCACGCCATTCTCCTGCCTCA MEME-4 regular expression -------------------------------------------------------------------------------- TTCACGCCATTCTCCTGCCTCA -------------------------------------------------------------------------------- Time 2877.92 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 width = 32 sites = 50 llr = 1833 E-value = 6.5e-538 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 1:::::a::1:a1::1:a:3a::::3::::a: pos.-specific C ::a:::::::a:::::9:71::a:7::a:a:9 probability G 9a::aa:a:9::9:a9:::6:::::6a::::: matrix T :::a::::a::::a::1:3::a:a31::a::1 bits 2.1 * * * * 1.9 ** * * * ** * **** *** * 1.7 ********* ** ***** **** ***** 1.5 ************ ***** **** ****** Relative 1.3 ****************** **** ****** Entropy 1.0 ******************* ***** ****** (52.9 bits) 0.8 ******************* ***** ****** 0.6 ******************************** 0.4 ******************************** 0.2 ******************************** 0.0 -------------------------------- Multilevel GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC consensus TA TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------------- chr1:173198527-173198627 - 29 9.03e-20 CTGTCACCCA GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC TGCAAGCTCC chr5:120824418-120824514 - 21 9.03e-20 CTGTCGCCCA GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC TGCAAGCTCT chr12:95164229-95164329 + 41 9.03e-20 ctgtcaccca ggctggagtgcagtggcacgatctcggctcac ggcaagctcc chr5:172020571-172020671 + 51 1.71e-19 ctgtcgccca ggctggagtgcagtggcacaatctcggctcac tgcaagcacc chr6:19491581-19491678 + 45 1.71e-19 ctgatgccca ggctggagtgcagtggcacaatctcggctcac tgcaagctcc chr3:81877268-81877368 + 35 2.52e-19 ctgtcgccca ggctggagtgcagtggcatgatctcggctcac tgcaaactct chrX:98400090-98400190 - 34 2.52e-19 CTGTTGCCCA GGCTGGAGTGCAGTGGCATGATCTCGGCTCAC TGCAAGCTCC chr1:216237428-216237524 - 9 3.32e-19 CTGTCGCCCA GGCTGGAGTGCAGTGGCACGATCTCAGCTCAC TGCAAGCT chr9:74318654-74318754 + 37 3.32e-19 ctgtcgccca ggctggagtgcagtggcacgatctcagctcac tgcaagatct chr10:16829812-16829912 + 49 4.13e-19 ctgtcgccca ggctggagtgcagtggcacgatcttggctcac tgcaagctcc chr11:99306624-99306724 - 46 4.13e-19 CTGTCGCCCA GGCTGGAGTGCAGTGGCACGATCTTGGCTCAC TGCAAGCTCC chr8:138828663-138828763 - 29 7.74e-19 CTGTCGCCTA GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC TGCAAGCTCT chrX:105907171-105907260 - 14 7.74e-19 CTGTCACCCG GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC TGCAAATCCT chr3:133017982-133018082 - 33 7.74e-19 CTGTCGCCCA GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC TGCAAGCTCC chr3:166895595-166895695 + 27 9.11e-19 ctgtcaccca ggctggagtgcagtggcataatctcagctcac tgcaagctct chr5:106464842-106464942 - 29 1.36e-18 CTGTCACCCA GGCTGGAGTGCAGTGGCACGATCTCTGCTCAC TGCAAGCTCT chr7:1128822-1128889 + 18 2.12e-18 ctgtcacccg ggctggagtgcagtggcacgatctcggctcat cccaccatca chr6:157045469-157045555 + 42 2.37e-18 ctgtcaccca ggctggagtgcagtggcaccatcttggctcac tgcaagctcc chr7:122463324-122463424 + 29 4.14e-18 ctgttgccca ggctggagtgcaatggcatgatctcggctcac tgcaagctcc chr1:12000000-12000100 - 29 4.14e-18 CTCTTGCCCA GGCTGGAGTACAGTGGCACAATCTCAGCTCAC TGCAAGCTCC chr2:72209408-72209508 - 43 4.82e-18 CTGTTGCCCA GGCTGGAGTACAGTGGCACAATCTTGGCTCAC TGCAATCTCT chr9:6630159-6630259 - 36 4.82e-18 TTGTCACCCA GGCTGGGGTGCAGTGGCACGATCTCGGCTCAC TGCAAGCTCC chr7:84538597-84538696 - 19 5.67e-18 CTGTCGCCCA GGCTGGAGTGCAGTGGCAAGATCTCGGCTCAC TGCAAACTCT chr2:233484093-233484178 - 7 5.67e-18 CTGTTGCCCA GGCTGGAGTGCAGTGGTACGATCTTGGCTCAC TGCGAG chr8:5142174-5142247 + 36 5.67e-18 ttgtcgccca ggctggagtgcagtggcacaatctcggcttac tgcaag chr7:69078355-69078452 + 46 7.67e-18 ctgtcgccca ggctggagtgcagtggtacaatctcagctcac tgcaaattct chr10:112185664-11218576 - 33 9.01e-18 CTGTCACCCA AGCTGGAGTGCAGTGGCACAATCTTGGCTCAC TGCAAGCTCT chr11:28843870-28843970 + 33 1.15e-17 ttgtcaccca agctggagtgcagtggcatgatcttggctcac cgcaaactac chr6:155512308-155512408 + 42 1.27e-17 ctgctgccca ggctggagtgcagtggcaccatctctgctcac tgcaagctcc chr4:81068971-81069068 + 49 1.67e-17 ctgtcgccca ggctggagtgcagtggcacaatctcggcccac tgcaagctct chr10:103183508-10318360 + 46 2.29e-17 ctgtcttcca ggctggagtacagtggcaccatctcagctcac tgcaagctct chr2:7188707-7188807 - 34 2.65e-17 CTGCCGCCCA GGCTGGAGTGCAGTAGCACAATCTCAGCTCAC TGCAAGCTCC chr2:173283868-173283952 - 13 3.09e-17 CTGTCACCCA GGGTGGAGTGCAGTGGCATGATCTCAGCTCAC TGCAAGCTCC chr11:19691555-19691655 + 43 3.44e-17 ctgtggccca ggctggagtgcagtggcatgatctcaggtcac tgcaagctcc chr4:47400921-47401021 + 45 3.71e-17 gtgtcaccca ggctggagtgcaatggcacgatctccgctcac tgcaagctcc chr2:19915850-19915940 - 13 4.14e-17 CTGTTGCCCT GGCTAGAGTGCAGTGGCATAATCTCAGCTCAC TGCACGCTCC chr7:105400351-105400440 + 42 4.54e-17 ctgttgccta ggctggagtgtagtggcaccatctcggctcac tgcaaactct chr4:5069185-5069285 + 48 5.30e-17 ctgtcgccca ggctggggtacagtggcacaatctcggctcac tgcaaactcc chr11:28117994-28118094 + 44 7.10e-17 ctgtcgtcca ggctggagtacagtggcacaatctcagcttac tgcaagctcc chr1:92734465-92734562 + 50 8.68e-17 ctgtcgccca ggctgcagtgcagtggcatgatctccgctcac tgcaagctcc chr7:72483935-72484009 + 35 8.68e-17 ctgttgccca ggctggagtgcaatgacacaatcttggctcac tgcaaact chr6:41411261-41411357 + 57 1.24e-16 ctgtcaccca ggctggaatgcagtgacacaatcttggctcac ggcaaact chr14:72090045-72090133 - 10 4.28e-16 CTGTCACCCG GGCTGGAGTGCAGTGGCATGATCTCGGCTCTG CTGAAGGCT chr1:178873889-178873989 + 28 7.98e-16 ctgtcaccca agcgggagtgcagtggtacgatctcggctcac tacaagctcc chr8:42434400-42434484 + 36 8.52e-16 ctgtcgccca ggctggagtgcagtggcatggtcccagctcac tgcaagctct chr1:144656234-144656327 + 45 1.72e-15 ctgttgccca ggttggagtgcactggcatgatctctgctcac tgcaaactct chr10:15903815-15903915 + 47 2.46e-15 ctgttgccca gactggagtgcagtggcacaatcttggctcct tgcaagctcc chr14:21273239-21273306 + 27 2.64e-15 ctttccccca ggctggagtgaagtggcacgatcacagctcat tgcaatctc chr14:52148597-52148686 + 36 9.82e-15 ctgtcatcca gactgcaatgcagtgacatgatctcagctcac tgcaaagtct chr1:72320072-72320172 - 35 4.27e-14 CTGTCGCCCA GGCTGGAGGGCATTGGCACTATCTTGACTCAC TGCAAGCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:173198527-173198627 9e-20 28_[-5]_40 chr5:120824418-120824514 9e-20 20_[-5]_44 chr12:95164229-95164329 9e-20 40_[+5]_28 chr5:172020571-172020671 1.7e-19 50_[+5]_18 chr6:19491581-19491678 1.7e-19 44_[+5]_21 chr3:81877268-81877368 2.5e-19 34_[+5]_34 chrX:98400090-98400190 2.5e-19 33_[-5]_35 chr1:216237428-216237524 3.3e-19 8_[-5]_56 chr9:74318654-74318754 3.3e-19 36_[+5]_32 chr10:16829812-16829912 4.1e-19 48_[+5]_20 chr11:99306624-99306724 4.1e-19 45_[-5]_23 chr8:138828663-138828763 7.7e-19 28_[-5]_40 chrX:105907171-105907260 7.7e-19 13_[-5]_44 chr3:133017982-133018082 7.7e-19 32_[-5]_36 chr3:166895595-166895695 9.1e-19 26_[+5]_42 chr5:106464842-106464942 1.4e-18 28_[-5]_40 chr7:1128822-1128889 2.1e-18 17_[+5]_18 chr6:157045469-157045555 2.4e-18 41_[+5]_13 chr7:122463324-122463424 4.1e-18 28_[+5]_40 chr1:12000000-12000100 4.1e-18 28_[-5]_40 chr2:72209408-72209508 4.8e-18 42_[-5]_26 chr9:6630159-6630259 4.8e-18 35_[-5]_33 chr7:84538597-84538696 5.7e-18 18_[-5]_49 chr2:233484093-233484178 5.7e-18 6_[-5]_47 chr8:5142174-5142247 5.7e-18 35_[+5]_6 chr7:69078355-69078452 7.7e-18 45_[+5]_20 chr10:112185664-11218576 9e-18 32_[-5]_36 chr11:28843870-28843970 1.2e-17 32_[+5]_36 chr6:155512308-155512408 1.3e-17 41_[+5]_27 chr4:81068971-81069068 1.7e-17 48_[+5]_17 chr10:103183508-10318360 2.3e-17 45_[+5]_23 chr2:7188707-7188807 2.7e-17 33_[-5]_35 chr2:173283868-173283952 3.1e-17 12_[-5]_40 chr11:19691555-19691655 3.4e-17 42_[+5]_26 chr4:47400921-47401021 3.7e-17 44_[+5]_24 chr2:19915850-19915940 4.1e-17 12_[-5]_46 chr7:105400351-105400440 4.5e-17 41_[+5]_16 chr4:5069185-5069285 5.3e-17 47_[+5]_21 chr11:28117994-28118094 7.1e-17 43_[+5]_25 chr1:92734465-92734562 8.7e-17 49_[+5]_16 chr7:72483935-72484009 8.7e-17 34_[+5]_8 chr6:41411261-41411357 1.2e-16 56_[+5]_8 chr14:72090045-72090133 4.3e-16 9_[-5]_47 chr1:178873889-178873989 8e-16 27_[+5]_41 chr8:42434400-42434484 8.5e-16 35_[+5]_17 chr1:144656234-144656327 1.7e-15 44_[+5]_17 chr10:15903815-15903915 2.5e-15 46_[+5]_22 chr14:21273239-21273306 2.6e-15 26_[+5]_9 chr14:52148597-52148686 9.8e-15 35_[+5]_22 chr1:72320072-72320172 4.3e-14 34_[-5]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC width=32 seqs=50 chr1:173198527-173198627 ( 29) GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC 1 chr5:120824418-120824514 ( 21) GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC 1 chr12:95164229-95164329 ( 41) GGCTGGAGTGCAGTGGCACGATCTCGGCTCAC 1 chr5:172020571-172020671 ( 51) GGCTGGAGTGCAGTGGCACAATCTCGGCTCAC 1 chr6:19491581-19491678 ( 45) GGCTGGAGTGCAGTGGCACAATCTCGGCTCAC 1 chr3:81877268-81877368 ( 35) GGCTGGAGTGCAGTGGCATGATCTCGGCTCAC 1 chrX:98400090-98400190 ( 34) GGCTGGAGTGCAGTGGCATGATCTCGGCTCAC 1 chr1:216237428-216237524 ( 9) GGCTGGAGTGCAGTGGCACGATCTCAGCTCAC 1 chr9:74318654-74318754 ( 37) GGCTGGAGTGCAGTGGCACGATCTCAGCTCAC 1 chr10:16829812-16829912 ( 49) GGCTGGAGTGCAGTGGCACGATCTTGGCTCAC 1 chr11:99306624-99306724 ( 46) GGCTGGAGTGCAGTGGCACGATCTTGGCTCAC 1 chr8:138828663-138828763 ( 29) GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC 1 chrX:105907171-105907260 ( 14) GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC 1 chr3:133017982-133018082 ( 33) GGCTGGAGTGCAGTGGCATGATCTTGGCTCAC 1 chr3:166895595-166895695 ( 27) GGCTGGAGTGCAGTGGCATAATCTCAGCTCAC 1 chr5:106464842-106464942 ( 29) GGCTGGAGTGCAGTGGCACGATCTCTGCTCAC 1 chr7:1128822-1128889 ( 18) GGCTGGAGTGCAGTGGCACGATCTCGGCTCAT 1 chr6:157045469-157045555 ( 42) GGCTGGAGTGCAGTGGCACCATCTTGGCTCAC 1 chr7:122463324-122463424 ( 29) GGCTGGAGTGCAATGGCATGATCTCGGCTCAC 1 chr1:12000000-12000100 ( 29) GGCTGGAGTACAGTGGCACAATCTCAGCTCAC 1 chr2:72209408-72209508 ( 43) GGCTGGAGTACAGTGGCACAATCTTGGCTCAC 1 chr9:6630159-6630259 ( 36) GGCTGGGGTGCAGTGGCACGATCTCGGCTCAC 1 chr7:84538597-84538696 ( 19) GGCTGGAGTGCAGTGGCAAGATCTCGGCTCAC 1 chr2:233484093-233484178 ( 7) GGCTGGAGTGCAGTGGTACGATCTTGGCTCAC 1 chr8:5142174-5142247 ( 36) GGCTGGAGTGCAGTGGCACAATCTCGGCTTAC 1 chr7:69078355-69078452 ( 46) GGCTGGAGTGCAGTGGTACAATCTCAGCTCAC 1 chr10:112185664-11218576 ( 33) AGCTGGAGTGCAGTGGCACAATCTTGGCTCAC 1 chr11:28843870-28843970 ( 33) AGCTGGAGTGCAGTGGCATGATCTTGGCTCAC 1 chr6:155512308-155512408 ( 42) GGCTGGAGTGCAGTGGCACCATCTCTGCTCAC 1 chr4:81068971-81069068 ( 49) GGCTGGAGTGCAGTGGCACAATCTCGGCCCAC 1 chr10:103183508-10318360 ( 46) GGCTGGAGTACAGTGGCACCATCTCAGCTCAC 1 chr2:7188707-7188807 ( 34) GGCTGGAGTGCAGTAGCACAATCTCAGCTCAC 1 chr2:173283868-173283952 ( 13) GGGTGGAGTGCAGTGGCATGATCTCAGCTCAC 1 chr11:19691555-19691655 ( 43) GGCTGGAGTGCAGTGGCATGATCTCAGGTCAC 1 chr4:47400921-47401021 ( 45) GGCTGGAGTGCAATGGCACGATCTCCGCTCAC 1 chr2:19915850-19915940 ( 13) GGCTAGAGTGCAGTGGCATAATCTCAGCTCAC 1 chr7:105400351-105400440 ( 42) GGCTGGAGTGTAGTGGCACCATCTCGGCTCAC 1 chr4:5069185-5069285 ( 48) GGCTGGGGTACAGTGGCACAATCTCGGCTCAC 1 chr11:28117994-28118094 ( 44) GGCTGGAGTACAGTGGCACAATCTCAGCTTAC 1 chr1:92734465-92734562 ( 50) GGCTGCAGTGCAGTGGCATGATCTCCGCTCAC 1 chr7:72483935-72484009 ( 35) GGCTGGAGTGCAATGACACAATCTTGGCTCAC 1 chr6:41411261-41411357 ( 57) GGCTGGAATGCAGTGACACAATCTTGGCTCAC 1 chr14:72090045-72090133 ( 10) GGCTGGAGTGCAGTGGCATGATCTCGGCTCTG 1 chr1:178873889-178873989 ( 28) AGCGGGAGTGCAGTGGTACGATCTCGGCTCAC 1 chr8:42434400-42434484 ( 36) GGCTGGAGTGCAGTGGCATGGTCCCAGCTCAC 1 chr1:144656234-144656327 ( 45) GGTTGGAGTGCACTGGCATGATCTCTGCTCAC 1 chr10:15903815-15903915 ( 47) GACTGGAGTGCAGTGGCACAATCTTGGCTCCT 1 chr14:21273239-21273306 ( 27) GGCTGGAGTGAAGTGGCACGATCACAGCTCAT 1 chr14:52148597-52148686 ( 36) GACTGCAATGCAGTGACATGATCTCAGCTCAC 1 chr1:72320072-72320172 ( 35) GGCTGGAGGGCATTGGCACTATCTTGACTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 32 n= 34446 bayes= 10.5601 E= 6.5e-538 -197 -1229 183 -1229 -256 -1229 186 -1229 -1229 186 -372 -355 -1229 -1229 -372 206 -355 -1229 189 -1229 -1229 -272 186 -1229 203 -1229 -272 -1229 -256 -1229 186 -1229 -1229 -1229 -372 206 -124 -1229 177 -1229 -355 186 -1229 -355 209 -1229 -1229 -1229 -197 -372 177 -355 -1229 -1229 -1229 209 -355 -1229 189 -1229 -197 -1229 183 -1229 -1229 183 -1229 -197 209 -1229 -1229 -1229 -355 132 -1229 44 44 -172 113 -355 206 -1229 -372 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -355 -372 -1229 203 -1229 144 -1229 25 25 -272 123 -197 -355 -1229 189 -1229 -1229 189 -372 -1229 -1229 -372 -1229 206 -1229 186 -1229 -256 203 -372 -1229 -355 -1229 180 -372 -197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 32 nsites= 50 E= 6.5e-538 0.060000 0.000000 0.940000 0.000000 0.040000 0.000000 0.960000 0.000000 0.000000 0.960000 0.020000 0.020000 0.000000 0.000000 0.020000 0.980000 0.020000 0.000000 0.980000 0.000000 0.000000 0.040000 0.960000 0.000000 0.960000 0.000000 0.040000 0.000000 0.040000 0.000000 0.960000 0.000000 0.000000 0.000000 0.020000 0.980000 0.100000 0.000000 0.900000 0.000000 0.020000 0.960000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 0.060000 0.020000 0.900000 0.020000 0.000000 0.000000 0.000000 1.000000 0.020000 0.000000 0.980000 0.000000 0.060000 0.000000 0.940000 0.000000 0.000000 0.940000 0.000000 0.060000 1.000000 0.000000 0.000000 0.000000 0.020000 0.660000 0.000000 0.320000 0.320000 0.080000 0.580000 0.020000 0.980000 0.000000 0.020000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.020000 0.020000 0.000000 0.960000 0.000000 0.720000 0.000000 0.280000 0.280000 0.040000 0.620000 0.060000 0.020000 0.000000 0.980000 0.000000 0.000000 0.980000 0.020000 0.000000 0.000000 0.020000 0.000000 0.980000 0.000000 0.960000 0.000000 0.040000 0.960000 0.020000 0.000000 0.020000 0.000000 0.920000 0.020000 0.060000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCTGGAGTGCAGTGGCACRATCTCGGCTCAC MEME-5 regular expression -------------------------------------------------------------------------------- GGCTGGAGTGCAGTGGCA[CT][GA]ATCT[CT][GA]GCTCAC -------------------------------------------------------------------------------- Time 3534.80 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGAGGCTGAGGCAGGAGAATG MEME-6 width = 22 sites = 50 llr = 1509 E-value = 1.2e-418 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 Description -------------------------------------------------------------------------------- Simplified A :::a:::::a:::a::a:aa:: pos.-specific C ::::::a:::::a::::::::: probability G aaa:aa::a:aa::aa:a:::a matrix T :::::::a::::::::::::a: bits 2.1 * * * * * *** 1.9 ********************** 1.7 ********************** 1.5 ********************** Relative 1.3 ********************** Entropy 1.0 ********************** (43.6 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel GGGAGGCTGAGGCAGGAGAATG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr5:43507796-43507896 + 75 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gcgt chr7:66384415-66384515 - 17 7.69e-14 CCAGCTGCTG GGGAGGCTGAGGCAGGAGAATG GTATGAACCT chr9:135428352-135428452 + 69 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gcatgaaccc chr5:53876123-53876223 + 78 7.69e-14 ccagctactc gggaggctgaggcaggagaatg g chr1:35813127-35813227 + 76 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gcg chr2:159242051-159242151 - 1 7.69e-14 CCAGCTGCTT GGGAGGCTGAGGCAGGAGAATG chr7:142598683-142598783 + 75 7.69e-14 ctcgctactc gggaggctgaggcaggagaatg gcgt chr6:42549860-42549960 + 73 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gcgtga chr12:101250085-10125018 - 5 7.69e-14 GGTGGGTGCT GGGAGGCTGAGGCAGGAGAATG GCGT chr4:9766246-9766346 + 52 7.69e-14 aatgctgctc gggaggctgaggcaggagaatg tcatgaaccc chr7:34689323-34689423 + 70 7.69e-14 acagctactc gggaggctgaggcaggagaatg gcatgaccc chr7:90263807-90263907 + 79 7.69e-14 ccagctactc gggaggctgaggcaggagaatg chrX:29534686-29534786 + 77 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gc chr12:66593786-66593886 + 72 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gtgtgaa chr1:23898335-23898435 - 8 7.69e-14 CCAGCTGCTT GGGAGGCTGAGGCAGGAGAATG GTGTGAA chr3:49200996-49201096 - 3 7.69e-14 CCAGCTACTT GGGAGGCTGAGGCAGGAGAATG GC chr2:28786574-28786674 + 32 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gcatgaaccc chr11:84445634-84445734 + 73 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gcgtga chr1:179277742-179277842 + 71 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gcatgaac chr8:102944936-102945036 - 1 7.69e-14 CCAGCTGCTT GGGAGGCTGAGGCAGGAGAATG chr6:139491925-139492025 + 76 7.69e-14 ccagttgctg gggaggctgaggcaggagaatg gcg chr1:163012678-163012778 - 5 7.69e-14 CCAGCTGCTT GGGAGGCTGAGGCAGGAGAATG GTGT chr11:67340614-67340714 - 3 7.69e-14 CCAGCTGCTT GGGAGGCTGAGGCAGGAGAATG GC chr13:36930988-36931088 - 4 7.69e-14 TCAGCTACTC GGGAGGCTGAGGCAGGAGAATG GCA chr2:6969760-6969860 - 6 7.69e-14 CCAGCTGCTG GGGAGGCTGAGGCAGGAGAATG ATGTG chr3:151984442-151984542 + 74 7.69e-14 ctagctactc gggaggctgaggcaggagaatg gcgtg chr10:2538305-2538405 + 75 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gcat chr12:118254757-11825485 - 3 7.69e-14 CCAGCTGCTC GGGAGGCTGAGGCAGGAGAATG GC chr2:121302741-121302841 + 73 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gcgtga chr9:30639856-30639956 + 78 7.69e-14 ctagctactc gggaggctgaggcaggagaatg g chr12:110188050-11018815 + 72 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gcatgaa chr5:69132514-69132614 + 31 7.69e-14 ccagctcctc gggaggctgaggcaggagaatg gtgtgaaccc chr9:81310960-81311060 - 7 7.69e-14 CCAGCTGCTC GGGAGGCTGAGGCAGGAGAATG GCGTGA chr5:69921644-69921744 + 70 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gcatgaacc chr12:112378761-11237886 + 75 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gtgt chr10:90826679-90826779 + 58 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gcatgaaccc chr7:100044386-100044486 + 79 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg chr4:35354740-35354840 + 73 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gcgtga chr1:104291685-104291785 - 4 7.69e-14 CTACTCAGGA GGGAGGCTGAGGCAGGAGAATG GCG chrX:52798733-52798833 + 78 7.69e-14 ccagttgctc gggaggctgaggcaggagaatg g chr6:134656753-134656853 + 77 7.69e-14 ccagctgctg gggaggctgaggcaggagaatg gc chr8:17038694-17038794 + 58 7.69e-14 ccagctgctc gggaggctgaggcaggagaatg gcttgaacct chr13:24621895-24621995 - 5 7.69e-14 CCAGCTACTC GGGAGGCTGAGGCAGGAGAATG GCGT chr4:1442888-1442988 - 8 7.69e-14 CCAGATACTC GGGAGGCTGAGGCAGGAGAATG GCGCAAA chr8:116462031-116462131 - 13 7.69e-14 CCAGGTGCTC GGGAGGCTGAGGCAGGAGAATG TTGTGAACCG chr9:129018612-129018712 + 76 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gca chr6:15093621-15093721 + 76 7.69e-14 ccagctactc gggaggctgaggcaggagaatg gct chr5:29874329-29874429 - 27 7.69e-14 CCAGCTACTT GGGAGGCTGAGGCAGGAGAATG GTGTGAACCC chr2:130352898-130352998 - 50 7.69e-14 CCAGCTGCTC GGGAGGCTGAGGCAGGAGAATG GCTTGAACCC chr14:37739881-37739981 + 78 7.69e-14 ccagctgttc gggaggctgaggcaggagaatg g -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:43507796-43507896 7.7e-14 74_[+6]_4 chr7:66384415-66384515 7.7e-14 16_[-6]_62 chr9:135428352-135428452 7.7e-14 68_[+6]_10 chr5:53876123-53876223 7.7e-14 77_[+6]_1 chr1:35813127-35813227 7.7e-14 75_[+6]_3 chr2:159242051-159242151 7.7e-14 [-6]_78 chr7:142598683-142598783 7.7e-14 74_[+6]_4 chr6:42549860-42549960 7.7e-14 72_[+6]_6 chr12:101250085-10125018 7.7e-14 4_[-6]_74 chr4:9766246-9766346 7.7e-14 51_[+6]_27 chr7:34689323-34689423 7.7e-14 69_[+6]_9 chr7:90263807-90263907 7.7e-14 78_[+6] chrX:29534686-29534786 7.7e-14 76_[+6]_2 chr12:66593786-66593886 7.7e-14 71_[+6]_7 chr1:23898335-23898435 7.7e-14 7_[-6]_71 chr3:49200996-49201096 7.7e-14 2_[-6]_76 chr2:28786574-28786674 7.7e-14 31_[+6]_47 chr11:84445634-84445734 7.7e-14 72_[+6]_6 chr1:179277742-179277842 7.7e-14 70_[+6]_8 chr8:102944936-102945036 7.7e-14 [-6]_78 chr6:139491925-139492025 7.7e-14 75_[+6]_3 chr1:163012678-163012778 7.7e-14 4_[-6]_74 chr11:67340614-67340714 7.7e-14 2_[-6]_76 chr13:36930988-36931088 7.7e-14 3_[-6]_75 chr2:6969760-6969860 7.7e-14 5_[-6]_73 chr3:151984442-151984542 7.7e-14 73_[+6]_5 chr10:2538305-2538405 7.7e-14 74_[+6]_4 chr12:118254757-11825485 7.7e-14 2_[-6]_76 chr2:121302741-121302841 7.7e-14 72_[+6]_6 chr9:30639856-30639956 7.7e-14 77_[+6]_1 chr12:110188050-11018815 7.7e-14 71_[+6]_7 chr5:69132514-69132614 7.7e-14 30_[+6]_48 chr9:81310960-81311060 7.7e-14 6_[-6]_72 chr5:69921644-69921744 7.7e-14 69_[+6]_9 chr12:112378761-11237886 7.7e-14 74_[+6]_4 chr10:90826679-90826779 7.7e-14 57_[+6]_21 chr7:100044386-100044486 7.7e-14 78_[+6] chr4:35354740-35354840 7.7e-14 72_[+6]_6 chr1:104291685-104291785 7.7e-14 3_[-6]_75 chrX:52798733-52798833 7.7e-14 77_[+6]_1 chr6:134656753-134656853 7.7e-14 76_[+6]_2 chr8:17038694-17038794 7.7e-14 57_[+6]_21 chr13:24621895-24621995 7.7e-14 4_[-6]_74 chr4:1442888-1442988 7.7e-14 7_[-6]_71 chr8:116462031-116462131 7.7e-14 12_[-6]_66 chr9:129018612-129018712 7.7e-14 75_[+6]_3 chr6:15093621-15093721 7.7e-14 75_[+6]_3 chr5:29874329-29874429 7.7e-14 26_[-6]_52 chr2:130352898-130352998 7.7e-14 49_[-6]_29 chr14:37739881-37739981 7.7e-14 77_[+6]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGAGGCTGAGGCAGGAGAATG width=22 seqs=50 chr5:43507796-43507896 ( 75) GGGAGGCTGAGGCAGGAGAATG 1 chr7:66384415-66384515 ( 17) GGGAGGCTGAGGCAGGAGAATG 1 chr9:135428352-135428452 ( 69) GGGAGGCTGAGGCAGGAGAATG 1 chr5:53876123-53876223 ( 78) GGGAGGCTGAGGCAGGAGAATG 1 chr1:35813127-35813227 ( 76) GGGAGGCTGAGGCAGGAGAATG 1 chr2:159242051-159242151 ( 1) GGGAGGCTGAGGCAGGAGAATG 1 chr7:142598683-142598783 ( 75) GGGAGGCTGAGGCAGGAGAATG 1 chr6:42549860-42549960 ( 73) GGGAGGCTGAGGCAGGAGAATG 1 chr12:101250085-10125018 ( 5) GGGAGGCTGAGGCAGGAGAATG 1 chr4:9766246-9766346 ( 52) GGGAGGCTGAGGCAGGAGAATG 1 chr7:34689323-34689423 ( 70) GGGAGGCTGAGGCAGGAGAATG 1 chr7:90263807-90263907 ( 79) GGGAGGCTGAGGCAGGAGAATG 1 chrX:29534686-29534786 ( 77) GGGAGGCTGAGGCAGGAGAATG 1 chr12:66593786-66593886 ( 72) GGGAGGCTGAGGCAGGAGAATG 1 chr1:23898335-23898435 ( 8) GGGAGGCTGAGGCAGGAGAATG 1 chr3:49200996-49201096 ( 3) GGGAGGCTGAGGCAGGAGAATG 1 chr2:28786574-28786674 ( 32) GGGAGGCTGAGGCAGGAGAATG 1 chr11:84445634-84445734 ( 73) GGGAGGCTGAGGCAGGAGAATG 1 chr1:179277742-179277842 ( 71) GGGAGGCTGAGGCAGGAGAATG 1 chr8:102944936-102945036 ( 1) GGGAGGCTGAGGCAGGAGAATG 1 chr6:139491925-139492025 ( 76) GGGAGGCTGAGGCAGGAGAATG 1 chr1:163012678-163012778 ( 5) GGGAGGCTGAGGCAGGAGAATG 1 chr11:67340614-67340714 ( 3) GGGAGGCTGAGGCAGGAGAATG 1 chr13:36930988-36931088 ( 4) GGGAGGCTGAGGCAGGAGAATG 1 chr2:6969760-6969860 ( 6) GGGAGGCTGAGGCAGGAGAATG 1 chr3:151984442-151984542 ( 74) GGGAGGCTGAGGCAGGAGAATG 1 chr10:2538305-2538405 ( 75) GGGAGGCTGAGGCAGGAGAATG 1 chr12:118254757-11825485 ( 3) GGGAGGCTGAGGCAGGAGAATG 1 chr2:121302741-121302841 ( 73) GGGAGGCTGAGGCAGGAGAATG 1 chr9:30639856-30639956 ( 78) GGGAGGCTGAGGCAGGAGAATG 1 chr12:110188050-11018815 ( 72) GGGAGGCTGAGGCAGGAGAATG 1 chr5:69132514-69132614 ( 31) GGGAGGCTGAGGCAGGAGAATG 1 chr9:81310960-81311060 ( 7) GGGAGGCTGAGGCAGGAGAATG 1 chr5:69921644-69921744 ( 70) GGGAGGCTGAGGCAGGAGAATG 1 chr12:112378761-11237886 ( 75) GGGAGGCTGAGGCAGGAGAATG 1 chr10:90826679-90826779 ( 58) GGGAGGCTGAGGCAGGAGAATG 1 chr7:100044386-100044486 ( 79) GGGAGGCTGAGGCAGGAGAATG 1 chr4:35354740-35354840 ( 73) GGGAGGCTGAGGCAGGAGAATG 1 chr1:104291685-104291785 ( 4) GGGAGGCTGAGGCAGGAGAATG 1 chrX:52798733-52798833 ( 78) GGGAGGCTGAGGCAGGAGAATG 1 chr6:134656753-134656853 ( 77) GGGAGGCTGAGGCAGGAGAATG 1 chr8:17038694-17038794 ( 58) GGGAGGCTGAGGCAGGAGAATG 1 chr13:24621895-24621995 ( 5) GGGAGGCTGAGGCAGGAGAATG 1 chr4:1442888-1442988 ( 8) GGGAGGCTGAGGCAGGAGAATG 1 chr8:116462031-116462131 ( 13) GGGAGGCTGAGGCAGGAGAATG 1 chr9:129018612-129018712 ( 76) GGGAGGCTGAGGCAGGAGAATG 1 chr6:15093621-15093721 ( 76) GGGAGGCTGAGGCAGGAGAATG 1 chr5:29874329-29874429 ( 27) GGGAGGCTGAGGCAGGAGAATG 1 chr2:130352898-130352998 ( 50) GGGAGGCTGAGGCAGGAGAATG 1 chr14:37739881-37739981 ( 78) GGGAGGCTGAGGCAGGAGAATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 40446 bayes= 9.65807 E= 1.2e-418 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 209 -1229 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 50 E= 1.2e-418 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGAGGCTGAGGCAGGAGAATG MEME-6 regular expression -------------------------------------------------------------------------------- GGGAGGCTGAGGCAGGAGAATG -------------------------------------------------------------------------------- Time 4170.10 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGGAGTGCAGTGGCACRATCT MEME-7 width = 22 sites = 50 llr = 1481 E-value = 1.0e-406 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 Description -------------------------------------------------------------------------------- Simplified A ::::a::::a:::::a:6a::: pos.-specific C a:::::::a:::::a:a:::a: probability G ::aa:a:a::a:aa:::4:::: matrix T :a::::a::::a:::::::a:a bits 2.1 * * * * * * ** * 1.9 ***************** **** 1.7 ***************** **** 1.5 ***************** **** Relative 1.3 ***************** **** Entropy 1.0 ********************** (42.7 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel CTGGAGTGCAGTGGCACAATCT consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chrY:10951442-10951505 + 34 6.14e-14 gtcacccaag ctggagtgcagtggcacaatct caagtcac chr9:105496202-105496299 + 48 6.14e-14 gtcgcccagg ctggagtgcagtggcacaatct ctctgctcac chrY:56834649-56834717 + 39 6.14e-14 gtcacccagg ctggagtgcagtggcacaatct ctgctcac chr3:95361036-95361117 - 13 6.14e-14 GTTGCCCAGG CTGGAGTGCAGTGGCACAATCT CGGCTCACTG chr10:103436015-10343610 + 59 6.14e-14 gttgcccagg ctggagtgcagtggcacaatct tggctc chr7:57493745-57493809 - 9 6.14e-14 GTCACCCAGG CTGGAGTGCAGTGGCACAATCT CAGCTCAC chrY:10651604-10651672 + 39 6.14e-14 gtcactcagg ctggagtgcagtggcacaatct cagctcac chrY:10648193-10648261 + 39 6.14e-14 gaaacccaga ctggagtgcagtggcacaatct cagcacac chr7:1128271-1128331 + 13 6.14e-14 gtcacccggg ctggagtgcagtggcacaatct cggctcatcc chr15:30846550-30846618 - 8 6.14e-14 GTCACCCAGC CTGGAGTGCAGTGGCACAATCT CAGTTCA chr8:42434059-42434126 + 45 6.14e-14 gttgcccagg ctggagtgcagtggcacaatct c chr15:30847030-30847085 - 8 6.14e-14 GTCATCCAGG CTGGAGTGCAGTGGCACAATCT CAGCTCA chr15:30846234-30846289 - 8 6.14e-14 GTCACCCAGG CTGGAGTGCAGTGGCACAATCT CAGCTCA chr13:72102950-72103029 - 6 6.14e-14 TGTCACCCAG CTGGAGTGCAGTGGCACAATCT TGGCT chr14:82192449-82192539 + 52 6.14e-14 attgcccagg ctggagtgcagtggcacaatct tggctcactg chrY:10805575-10805643 + 39 6.14e-14 gtcacccagc ctggagtgcagtggcacaatct tagctgac chr1:69192955-69193017 + 41 6.14e-14 gttgctcggg ctggagtgcagtggcacaatct chr7:85732351-85732435 - 5 6.14e-14 GTCGCCCAGG CTGGAGTGCAGTGGCACAATCT TGGC chrY:11006515-11006583 + 39 6.14e-14 gtcaccgagg ctggagtgcagtggcacaatct cagctcac chr1:3936637-3936690 + 20 6.14e-14 gtcacccagt ctggagtgcagtggcacaatct gggctcactg chr15:30846092-30846149 - 9 6.14e-14 GTCACCTAGG CTGGAGTGCAGTGGCACAATCT CAGCTCAC chr1:44875141-44875211 - 1 6.14e-14 GTTGCCCAGG CTGGAGTGCAGTGGCACAATCT chr5:21669465-21669520 + 11 6.14e-14 gtcacttagg ctggagtgcagtggcacaatct cggctcacag chr5:9840893-9840993 + 28 6.14e-14 tttcacccag ctggagtgcagtggcacaatct cagctcactg chr15:30844974-30845029 - 8 6.14e-14 GTCACCCAGG CTGGAGTGCAGTGGCACAATCT CAGCTCA chrY:10629763-10629831 + 39 6.14e-14 gaaacccaga ctggagtgcagtggcacaatct cagcacac chrY:10846784-10846840 + 27 6.14e-14 gtcacccaga ctggagtgcagtggcacaatct tagctcac chr2:197966845-197966945 + 39 6.14e-14 gtcgcccagg ctggagtgcagtggcacaatct tggctcactg chrY:10896205-10896270 + 36 6.14e-14 gtcacacagg ctggagtgcagtggcacaatct caacccac chrY:56836194-56836250 + 27 6.14e-14 gtcaccctgg ctggagtgcagtggcacaatct cagctcac chr15:30845982-30846059 - 8 6.14e-14 GTCACCTAGG CTGGAGTGCAGTGGCACAATCT CAGCTCA chr5:120085858-120085949 + 43 1.30e-13 gttgtccagg ctggagtgcagtggcacgatct tggctcactg chr4:122970474-122970539 + 44 1.30e-13 gtcacccagg ctggagtgcagtggcacgatct chr1:199381036-199381108 + 43 1.30e-13 gtcgcccagg ctggagtgcagtggcacgatct cggctcac chr3:121554503-121554575 - 6 1.30e-13 ATTGGCCAGG CTGGAGTGCAGTGGCACGATCT TGGCT chr9:122735475-122735575 + 35 1.30e-13 gtcacccagg ctggagtgcagtggcacgatct tggctcactg chr5:143363487-143363587 - 34 1.30e-13 GTCACCCAGG CTGGAGTGCAGTGGCACGATCT CAGCTCACTG chr5:63593474-63593557 - 7 1.30e-13 GTCGCCTAGG CTGGAGTGCAGTGGCACGATCT CGGCTC chr2:63402652-63402743 + 37 1.30e-13 gtcgcccagg ctggagtgcagtggcacgatct tggctcactg chr2:112354003-112354078 - 6 1.30e-13 GTCACCCAGG CTGGAGTGCAGTGGCACGATCT CGGCT chr4:142294778-142294856 - 2 1.30e-13 GTCGCCCGGG CTGGAGTGCAGTGGCACGATCT C chr9:120743660-120743745 - 14 1.30e-13 GTTGCCCAGG CTGGAGTGCAGTGGCACGATCT CGGCTCACTG chr6:17249723-17249807 - 13 1.30e-13 GTCGCCCAGG CTGGAGTGCAGTGGCACGATCT CAGCTCACTG chr1:18247045-18247125 + 52 1.30e-13 gtcgcccagg ctggagtgcagtggcacgatct ctgcaca chr6:62656211-62656311 - 28 1.30e-13 GTCACCCAGG CTGGAGTGCAGTGGCACGATCT CGGCTCACTG chr11:65709460-65709531 + 45 1.30e-13 gttgcccagg ctggagtgcagtggcacgatct tggct chr6:7652151-7652251 + 15 1.30e-13 gtcgcccagg ctggagtgcagtggcacgatct cggctcactg chr10:23125623-23125723 + 47 1.30e-13 gtcgcccagg ctggagtgcagtggcacgatct cggctcactg chr6:136317897-136317974 + 41 1.30e-13 gtcacccagg ctggagtgcagtggcacgatct caggtttgct chrY:10808851-10808900 + 20 1.85e-13 ttcaaccaga ctggagtgcagtggcataatct ttgctcac -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrY:10951442-10951505 6.1e-14 33_[+7]_8 chr9:105496202-105496299 6.1e-14 47_[+7]_28 chrY:56834649-56834717 6.1e-14 38_[+7]_8 chr3:95361036-95361117 6.1e-14 12_[-7]_47 chr10:103436015-10343610 6.1e-14 58_[+7]_6 chr7:57493745-57493809 6.1e-14 8_[-7]_34 chrY:10651604-10651672 6.1e-14 38_[+7]_8 chrY:10648193-10648261 6.1e-14 38_[+7]_8 chr7:1128271-1128331 6.1e-14 12_[+7]_26 chr15:30846550-30846618 6.1e-14 7_[-7]_39 chr8:42434059-42434126 6.1e-14 44_[+7]_1 chr15:30847030-30847085 6.1e-14 7_[-7]_26 chr15:30846234-30846289 6.1e-14 7_[-7]_26 chr13:72102950-72103029 6.1e-14 5_[-7]_52 chr14:82192449-82192539 6.1e-14 51_[+7]_17 chrY:10805575-10805643 6.1e-14 38_[+7]_8 chr1:69192955-69193017 6.1e-14 40_[+7] chr7:85732351-85732435 6.1e-14 4_[-7]_58 chrY:11006515-11006583 6.1e-14 38_[+7]_8 chr1:3936637-3936690 6.1e-14 19_[+7]_12 chr15:30846092-30846149 6.1e-14 8_[-7]_27 chr1:44875141-44875211 6.1e-14 [-7]_48 chr5:21669465-21669520 6.1e-14 10_[+7]_23 chr5:9840893-9840993 6.1e-14 27_[+7]_51 chr15:30844974-30845029 6.1e-14 7_[-7]_26 chrY:10629763-10629831 6.1e-14 38_[+7]_8 chrY:10846784-10846840 6.1e-14 26_[+7]_8 chr2:197966845-197966945 6.1e-14 38_[+7]_40 chrY:10896205-10896270 6.1e-14 35_[+7]_8 chrY:56836194-56836250 6.1e-14 26_[+7]_8 chr15:30845982-30846059 6.1e-14 7_[-7]_48 chr5:120085858-120085949 1.3e-13 42_[+7]_27 chr4:122970474-122970539 1.3e-13 43_[+7] chr1:199381036-199381108 1.3e-13 42_[+7]_8 chr3:121554503-121554575 1.3e-13 5_[-7]_45 chr9:122735475-122735575 1.3e-13 34_[+7]_44 chr5:143363487-143363587 1.3e-13 33_[-7]_45 chr5:63593474-63593557 1.3e-13 6_[-7]_55 chr2:63402652-63402743 1.3e-13 36_[+7]_33 chr2:112354003-112354078 1.3e-13 5_[-7]_48 chr4:142294778-142294856 1.3e-13 1_[-7]_55 chr9:120743660-120743745 1.3e-13 13_[-7]_50 chr6:17249723-17249807 1.3e-13 12_[-7]_50 chr1:18247045-18247125 1.3e-13 51_[+7]_7 chr6:62656211-62656311 1.3e-13 27_[-7]_51 chr11:65709460-65709531 1.3e-13 44_[+7]_5 chr6:7652151-7652251 1.3e-13 14_[+7]_64 chr10:23125623-23125723 1.3e-13 46_[+7]_32 chr6:136317897-136317974 1.3e-13 40_[+7]_15 chrY:10808851-10808900 1.9e-13 19_[+7]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGGAGTGCAGTGGCACRATCT width=22 seqs=50 chrY:10951442-10951505 ( 34) CTGGAGTGCAGTGGCACAATCT 1 chr9:105496202-105496299 ( 48) CTGGAGTGCAGTGGCACAATCT 1 chrY:56834649-56834717 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chr3:95361036-95361117 ( 13) CTGGAGTGCAGTGGCACAATCT 1 chr10:103436015-10343610 ( 59) CTGGAGTGCAGTGGCACAATCT 1 chr7:57493745-57493809 ( 9) CTGGAGTGCAGTGGCACAATCT 1 chrY:10651604-10651672 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chrY:10648193-10648261 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chr7:1128271-1128331 ( 13) CTGGAGTGCAGTGGCACAATCT 1 chr15:30846550-30846618 ( 8) CTGGAGTGCAGTGGCACAATCT 1 chr8:42434059-42434126 ( 45) CTGGAGTGCAGTGGCACAATCT 1 chr15:30847030-30847085 ( 8) CTGGAGTGCAGTGGCACAATCT 1 chr15:30846234-30846289 ( 8) CTGGAGTGCAGTGGCACAATCT 1 chr13:72102950-72103029 ( 6) CTGGAGTGCAGTGGCACAATCT 1 chr14:82192449-82192539 ( 52) CTGGAGTGCAGTGGCACAATCT 1 chrY:10805575-10805643 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chr1:69192955-69193017 ( 41) CTGGAGTGCAGTGGCACAATCT 1 chr7:85732351-85732435 ( 5) CTGGAGTGCAGTGGCACAATCT 1 chrY:11006515-11006583 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chr1:3936637-3936690 ( 20) CTGGAGTGCAGTGGCACAATCT 1 chr15:30846092-30846149 ( 9) CTGGAGTGCAGTGGCACAATCT 1 chr1:44875141-44875211 ( 1) CTGGAGTGCAGTGGCACAATCT 1 chr5:21669465-21669520 ( 11) CTGGAGTGCAGTGGCACAATCT 1 chr5:9840893-9840993 ( 28) CTGGAGTGCAGTGGCACAATCT 1 chr15:30844974-30845029 ( 8) CTGGAGTGCAGTGGCACAATCT 1 chrY:10629763-10629831 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chrY:10846784-10846840 ( 27) CTGGAGTGCAGTGGCACAATCT 1 chr2:197966845-197966945 ( 39) CTGGAGTGCAGTGGCACAATCT 1 chrY:10896205-10896270 ( 36) CTGGAGTGCAGTGGCACAATCT 1 chrY:56836194-56836250 ( 27) CTGGAGTGCAGTGGCACAATCT 1 chr15:30845982-30846059 ( 8) CTGGAGTGCAGTGGCACAATCT 1 chr5:120085858-120085949 ( 43) CTGGAGTGCAGTGGCACGATCT 1 chr4:122970474-122970539 ( 44) CTGGAGTGCAGTGGCACGATCT 1 chr1:199381036-199381108 ( 43) CTGGAGTGCAGTGGCACGATCT 1 chr3:121554503-121554575 ( 6) CTGGAGTGCAGTGGCACGATCT 1 chr9:122735475-122735575 ( 35) CTGGAGTGCAGTGGCACGATCT 1 chr5:143363487-143363587 ( 34) CTGGAGTGCAGTGGCACGATCT 1 chr5:63593474-63593557 ( 7) CTGGAGTGCAGTGGCACGATCT 1 chr2:63402652-63402743 ( 37) CTGGAGTGCAGTGGCACGATCT 1 chr2:112354003-112354078 ( 6) CTGGAGTGCAGTGGCACGATCT 1 chr4:142294778-142294856 ( 2) CTGGAGTGCAGTGGCACGATCT 1 chr9:120743660-120743745 ( 14) CTGGAGTGCAGTGGCACGATCT 1 chr6:17249723-17249807 ( 13) CTGGAGTGCAGTGGCACGATCT 1 chr1:18247045-18247125 ( 52) CTGGAGTGCAGTGGCACGATCT 1 chr6:62656211-62656311 ( 28) CTGGAGTGCAGTGGCACGATCT 1 chr11:65709460-65709531 ( 45) CTGGAGTGCAGTGGCACGATCT 1 chr6:7652151-7652251 ( 15) CTGGAGTGCAGTGGCACGATCT 1 chr10:23125623-23125723 ( 47) CTGGAGTGCAGTGGCACGATCT 1 chr6:136317897-136317974 ( 41) CTGGAGTGCAGTGGCACGATCT 1 chrY:10808851-10808900 ( 20) CTGGAGTGCAGTGGCATAATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 40446 bayes= 10.1486 E= 1.0e-406 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -1229 -1229 192 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 189 -1229 -355 144 -1229 44 -1229 209 -1229 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 50 E= 1.0e-406 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.640000 0.000000 0.360000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTGCAGTGGCACRATCT MEME-7 regular expression -------------------------------------------------------------------------------- CTGGAGTGCAGTGGCAC[AG]ATCT -------------------------------------------------------------------------------- Time 4795.79 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCATTCTCCTGCCTCAGCCTC MEME-8 width = 22 sites = 50 llr = 1469 E-value = 2.6e-401 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 Description -------------------------------------------------------------------------------- Simplified A 2::a::::::::::::a::::: pos.-specific C :aa:::a:aa::aa:a::aa:a probability G 8::::::::::a:::::a:::: matrix T ::::aa:a::a:::a:::::a: bits 2.1 *** * * * * 1.9 ********************* 1.7 ********************* 1.5 ********************* Relative 1.3 ********************** Entropy 1.0 ********************** (42.4 bits) 0.8 ********************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel GCCATTCTCCTGCCTCAGCCTC consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr10:122031397-12203149 + 7 7.69e-14 gttcat gccattctcctgcctcagcctc ccgagtagct chr6:42329708-42329808 - 79 7.69e-14 . GCCATTCTCCTGCCTCAGCCTC CGGAGTAGCT chr6:16914951-16915051 + 6 7.69e-14 ttcat gccattctcctgcctcagcctc cggagtagct chr14:82205874-82205974 + 1 7.69e-14 . gccattctcctgcctcagcctc ccaagcagct chr9:29621060-29621160 - 77 7.69e-14 AC GCCATTCTCCTGCCTCAGCCTC CAGAGCAGTT chr1:165264921-165265021 - 76 7.69e-14 CCC GCCATTCTCCTGCCTCAGCCTC CTGAGTAGCC chr14:46964919-46965019 + 5 7.69e-14 tcac gccattctcctgcctcagcctc ccgagcagct chr10:120759828-12075992 - 79 7.69e-14 . GCCATTCTCCTGCCTCAGCCTC CCAAGTAGCT chr3:32904539-32904639 - 75 7.69e-14 TCAC GCCATTCTCCTGCCTCAGCCTC TCAAGCAGCT chr2:32481484-32481584 - 76 7.69e-14 CAT GCCATTCTCCTGCCTCAGCCTC CCAAGCAGCT chr2:216641999-216642099 + 4 7.69e-14 cat gccattctcctgcctcagcctc ctgagtagct chr8:15385900-15386000 + 4 7.69e-14 cac gccattctcctgcctcagcctc ctgagtagct chr9:104659686-104659786 + 4 7.69e-14 cac gccattctcctgcctcagcctc cctagcagct chr9:130358678-130358778 + 5 7.69e-14 tcac gccattctcctgcctcagcctc ccgagcagct chr3:33238627-33238727 - 73 7.69e-14 GTTTAG GCCATTCTCCTGCCTCAGCCTC CCAAGTAGCT chr6:35513362-35513462 - 72 7.69e-14 GGTACAC GCCATTCTCCTGCCTCAGCCTC CTGAGTAGCT chr7:111648390-111648490 - 78 7.69e-14 C GCCATTCTCCTGCCTCAGCCTC CTGAGCAGCT chr5:14395785-14395885 - 65 7.69e-14 CCAGGTTCAT GCCATTCTCCTGCCTCAGCCTC CGGAGCAGCT chr12:98768452-98768552 - 77 7.69e-14 AC GCCATTCTCCTGCCTCAGCCTC CTGAGCAGCT chr1:14465118-14465218 - 77 7.69e-14 AC GCCATTCTCCTGCCTCAGCCTC CCAAGCAGCT chr7:75871197-75871297 - 75 7.69e-14 TCAC GCCATTCTCCTGCCTCAGCCTC CTGAGCAGCT chr13:67697717-67697817 - 79 7.69e-14 . GCCATTCTCCTGCCTCAGCCTC CCAAGCAGCT chr6:42019997-42020097 - 72 7.69e-14 GGTTCGT GCCATTCTCCTGCCTCAGCCTC CTGAGTAGCT chr8:97998239-97998339 - 77 7.69e-14 AC GCCATTCTCCTGCCTCAGCCTC CTGAGCAGTT chr13:99096491-99096591 - 68 7.69e-14 CCGGGTTCAT GCCATTCTCCTGCCTCAGCCTC CAGAGCAGCT chr2:89130434-89130534 + 59 7.69e-14 ccgggttcag gccattctcctgcctcagcctc ccaaggagct chr2:26773218-26773318 - 79 7.69e-14 . GCCATTCTCCTGCCTCAGCCTC CTGAGCAGCT chr6:7652151-7652251 + 70 7.69e-14 ccgggttcaa gccattctcctgcctcagcctc ccgagcagc chr14:47298677-47298777 + 5 7.69e-14 tcac gccattctcctgcctcagcctc ctgagtagct chr2:39205480-39205580 - 71 7.69e-14 GGGTTCCC GCCATTCTCCTGCCTCAGCCTC CTGAGTAGCT chr9:19168445-19168545 - 77 7.69e-14 AC GCCATTCTCCTGCCTCAGCCTC CGAAGCAGCT chr12:111622106-11162220 + 1 7.69e-14 . gccattctcctgcctcagcctc ccagcctcct chr9:11695307-11695407 - 71 7.69e-14 AGGTTCAT GCCATTCTCCTGCCTCAGCCTC CCAAGTAGCT chr3:78859800-78859900 - 78 7.69e-14 T GCCATTCTCCTGCCTCAGCCTC TCGAGTAGCT chr5:53605732-53605832 - 76 7.69e-14 CAC GCCATTCTCCTGCCTCAGCCTC CTCAGCAGCT chr3:109450844-109450944 - 78 1.46e-13 C ACCATTCTCCTGCCTCAGCCTC CCAAGTAGCT chr12:31666638-31666738 + 6 1.46e-13 ttcac accattctcctgcctcagcctc ctgagtagct chr6:1968979-1969079 - 73 1.46e-13 GTTCAC ACCATTCTCCTGCCTCAGCCTC CCAAGCAGCT chr7:64177392-64177492 + 8 1.46e-13 ggttcac accattctcctgcctcagcctc tagagtagct chr12:128847276-12884737 - 75 1.46e-13 TCAC ACCATTCTCCTGCCTCAGCCTC CGGAGCAGGT chr2:218819597-218819697 + 1 1.46e-13 . accattctcctgcctcagcctc ccgagtagct chr8:25402294-25402394 + 4 1.46e-13 cac accattctcctgcctcagcctc ctgagtagct chr3:195476340-195476440 + 2 1.46e-13 c accattctcctgcctcagcctc cagagtagct chr8:86936458-86936558 - 79 1.46e-13 . ACCATTCTCCTGCCTCAGCCTC CTGAGTAGCT chr15:20347115-20347215 + 4 1.46e-13 cac accattctcctgcctcagcctc ctgagcagct chr11:9345150-9345250 - 77 1.46e-13 AT ACCATTCTCCTGCCTCAGCCTC CTGAGTAGCT chr8:127188699-127188799 - 67 1.46e-13 CCGGGTTCAC ACCATTCTCCTGCCTCAGCCTC CCAAGTAGCT chrY:1855179-1855279 - 66 2.83e-13 CCAGGTTCAA GCTATTCTCCTGCCTCAGCCTC GTGAGTAGCT chr4:182262716-182262816 + 21 2.83e-13 ccgggttcac gccattctcctgcttcagcctc ccgagcagct chr12:14299164-14299264 + 11 3.69e-13 ccaggttcac gccattctcccgcctcagcctc ccaagtagct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:122031397-12203149 7.7e-14 6_[+8]_72 chr6:42329708-42329808 7.7e-14 78_[-8] chr6:16914951-16915051 7.7e-14 5_[+8]_73 chr14:82205874-82205974 7.7e-14 [+8]_78 chr9:29621060-29621160 7.7e-14 76_[-8]_2 chr1:165264921-165265021 7.7e-14 75_[-8]_3 chr14:46964919-46965019 7.7e-14 4_[+8]_74 chr10:120759828-12075992 7.7e-14 78_[-8] chr3:32904539-32904639 7.7e-14 74_[-8]_4 chr2:32481484-32481584 7.7e-14 75_[-8]_3 chr2:216641999-216642099 7.7e-14 3_[+8]_75 chr8:15385900-15386000 7.7e-14 3_[+8]_75 chr9:104659686-104659786 7.7e-14 3_[+8]_75 chr9:130358678-130358778 7.7e-14 4_[+8]_74 chr3:33238627-33238727 7.7e-14 72_[-8]_6 chr6:35513362-35513462 7.7e-14 71_[-8]_7 chr7:111648390-111648490 7.7e-14 77_[-8]_1 chr5:14395785-14395885 7.7e-14 64_[-8]_14 chr12:98768452-98768552 7.7e-14 76_[-8]_2 chr1:14465118-14465218 7.7e-14 76_[-8]_2 chr7:75871197-75871297 7.7e-14 74_[-8]_4 chr13:67697717-67697817 7.7e-14 78_[-8] chr6:42019997-42020097 7.7e-14 71_[-8]_7 chr8:97998239-97998339 7.7e-14 76_[-8]_2 chr13:99096491-99096591 7.7e-14 67_[-8]_11 chr2:89130434-89130534 7.7e-14 58_[+8]_20 chr2:26773218-26773318 7.7e-14 78_[-8] chr6:7652151-7652251 7.7e-14 69_[+8]_9 chr14:47298677-47298777 7.7e-14 4_[+8]_74 chr2:39205480-39205580 7.7e-14 70_[-8]_8 chr9:19168445-19168545 7.7e-14 76_[-8]_2 chr12:111622106-11162220 7.7e-14 [+8]_78 chr9:11695307-11695407 7.7e-14 70_[-8]_8 chr3:78859800-78859900 7.7e-14 77_[-8]_1 chr5:53605732-53605832 7.7e-14 75_[-8]_3 chr3:109450844-109450944 1.5e-13 77_[-8]_1 chr12:31666638-31666738 1.5e-13 5_[+8]_73 chr6:1968979-1969079 1.5e-13 72_[-8]_6 chr7:64177392-64177492 1.5e-13 7_[+8]_71 chr12:128847276-12884737 1.5e-13 74_[-8]_4 chr2:218819597-218819697 1.5e-13 [+8]_78 chr8:25402294-25402394 1.5e-13 3_[+8]_75 chr3:195476340-195476440 1.5e-13 1_[+8]_77 chr8:86936458-86936558 1.5e-13 78_[-8] chr15:20347115-20347215 1.5e-13 3_[+8]_75 chr11:9345150-9345250 1.5e-13 76_[-8]_2 chr8:127188699-127188799 1.5e-13 66_[-8]_12 chrY:1855179-1855279 2.8e-13 65_[-8]_13 chr4:182262716-182262816 2.8e-13 20_[+8]_58 chr12:14299164-14299264 3.7e-13 10_[+8]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCATTCTCCTGCCTCAGCCTC width=22 seqs=50 chr10:122031397-12203149 ( 7) GCCATTCTCCTGCCTCAGCCTC 1 chr6:42329708-42329808 ( 79) GCCATTCTCCTGCCTCAGCCTC 1 chr6:16914951-16915051 ( 6) GCCATTCTCCTGCCTCAGCCTC 1 chr14:82205874-82205974 ( 1) GCCATTCTCCTGCCTCAGCCTC 1 chr9:29621060-29621160 ( 77) GCCATTCTCCTGCCTCAGCCTC 1 chr1:165264921-165265021 ( 76) GCCATTCTCCTGCCTCAGCCTC 1 chr14:46964919-46965019 ( 5) GCCATTCTCCTGCCTCAGCCTC 1 chr10:120759828-12075992 ( 79) GCCATTCTCCTGCCTCAGCCTC 1 chr3:32904539-32904639 ( 75) GCCATTCTCCTGCCTCAGCCTC 1 chr2:32481484-32481584 ( 76) GCCATTCTCCTGCCTCAGCCTC 1 chr2:216641999-216642099 ( 4) GCCATTCTCCTGCCTCAGCCTC 1 chr8:15385900-15386000 ( 4) GCCATTCTCCTGCCTCAGCCTC 1 chr9:104659686-104659786 ( 4) GCCATTCTCCTGCCTCAGCCTC 1 chr9:130358678-130358778 ( 5) GCCATTCTCCTGCCTCAGCCTC 1 chr3:33238627-33238727 ( 73) GCCATTCTCCTGCCTCAGCCTC 1 chr6:35513362-35513462 ( 72) GCCATTCTCCTGCCTCAGCCTC 1 chr7:111648390-111648490 ( 78) GCCATTCTCCTGCCTCAGCCTC 1 chr5:14395785-14395885 ( 65) GCCATTCTCCTGCCTCAGCCTC 1 chr12:98768452-98768552 ( 77) GCCATTCTCCTGCCTCAGCCTC 1 chr1:14465118-14465218 ( 77) GCCATTCTCCTGCCTCAGCCTC 1 chr7:75871197-75871297 ( 75) GCCATTCTCCTGCCTCAGCCTC 1 chr13:67697717-67697817 ( 79) GCCATTCTCCTGCCTCAGCCTC 1 chr6:42019997-42020097 ( 72) GCCATTCTCCTGCCTCAGCCTC 1 chr8:97998239-97998339 ( 77) GCCATTCTCCTGCCTCAGCCTC 1 chr13:99096491-99096591 ( 68) GCCATTCTCCTGCCTCAGCCTC 1 chr2:89130434-89130534 ( 59) GCCATTCTCCTGCCTCAGCCTC 1 chr2:26773218-26773318 ( 79) GCCATTCTCCTGCCTCAGCCTC 1 chr6:7652151-7652251 ( 70) GCCATTCTCCTGCCTCAGCCTC 1 chr14:47298677-47298777 ( 5) GCCATTCTCCTGCCTCAGCCTC 1 chr2:39205480-39205580 ( 71) GCCATTCTCCTGCCTCAGCCTC 1 chr9:19168445-19168545 ( 77) GCCATTCTCCTGCCTCAGCCTC 1 chr12:111622106-11162220 ( 1) GCCATTCTCCTGCCTCAGCCTC 1 chr9:11695307-11695407 ( 71) GCCATTCTCCTGCCTCAGCCTC 1 chr3:78859800-78859900 ( 78) GCCATTCTCCTGCCTCAGCCTC 1 chr5:53605732-53605832 ( 76) GCCATTCTCCTGCCTCAGCCTC 1 chr3:109450844-109450944 ( 78) ACCATTCTCCTGCCTCAGCCTC 1 chr12:31666638-31666738 ( 6) ACCATTCTCCTGCCTCAGCCTC 1 chr6:1968979-1969079 ( 73) ACCATTCTCCTGCCTCAGCCTC 1 chr7:64177392-64177492 ( 8) ACCATTCTCCTGCCTCAGCCTC 1 chr12:128847276-12884737 ( 75) ACCATTCTCCTGCCTCAGCCTC 1 chr2:218819597-218819697 ( 1) ACCATTCTCCTGCCTCAGCCTC 1 chr8:25402294-25402394 ( 4) ACCATTCTCCTGCCTCAGCCTC 1 chr3:195476340-195476440 ( 2) ACCATTCTCCTGCCTCAGCCTC 1 chr8:86936458-86936558 ( 79) ACCATTCTCCTGCCTCAGCCTC 1 chr15:20347115-20347215 ( 4) ACCATTCTCCTGCCTCAGCCTC 1 chr11:9345150-9345250 ( 77) ACCATTCTCCTGCCTCAGCCTC 1 chr8:127188699-127188799 ( 67) ACCATTCTCCTGCCTCAGCCTC 1 chrY:1855179-1855279 ( 66) GCTATTCTCCTGCCTCAGCCTC 1 chr4:182262716-182262816 ( 21) GCCATTCTCCTGCTTCAGCCTC 1 chr12:14299164-14299264 ( 11) GCCATTCTCCCGCCTCAGCCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 40446 bayes= 10.1486 E= 2.6e-401 3 -1229 152 -1229 -1229 192 -1229 -1229 -1229 189 -1229 -355 209 -1229 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 -372 -1229 206 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 189 -1229 -355 -1229 -1229 -1229 209 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 192 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 50 E= 2.6e-401 0.240000 0.000000 0.760000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.020000 0.000000 0.980000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATTCTCCTGCCTCAGCCTC MEME-8 regular expression -------------------------------------------------------------------------------- [GA]CCATTCTCCTGCCTCAGCCTC -------------------------------------------------------------------------------- Time 5403.94 secs. ******************************************************************************** ******************************************************************************** MOTIF TAGCTGGGACTACAGGCGCC MEME-9 width = 20 sites = 50 llr = 1331 E-value = 5.0e-346 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 Description -------------------------------------------------------------------------------- Simplified A :a::::::a::a:a:::::: pos.-specific C 3::a:::::a::a:::a:aa probability G ::a::aaa::::::aa:a:: matrix T 7:::a:::::a::::::::: bits 2.1 * * * ** * 1.9 ******************* 1.7 ******************* 1.5 ******************* Relative 1.3 ******************** Entropy 1.0 ******************** (38.4 bits) 0.8 ******************** 0.6 ******************** 0.4 ******************** 0.2 ******************** 0.0 -------------------- Multilevel TAGCTGGGACTACAGGCGCC consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chr3:133502305-133502405 - 47 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CGCCACCACA chr1:247033252-247033352 - 55 1.23e-12 GCCTCCCAAG TAGCTGGGACTACAGGCGCC CGCCACCATG chr12:86443581-86443681 + 35 1.23e-12 gcctcccgag tagctgggactacaggcgcc tgccaccatg chr10:10494994-10495094 - 61 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CGCCACCATG chr7:142598683-142598783 - 45 1.23e-12 GAGTAGCGAG TAGCTGGGACTACAGGCGCC CACCACTAGG chr2:72380357-72380457 - 62 1.23e-12 GCCTTCTGAG TAGCTGGGACTACAGGCGCC TGCCACCACG chr11:113929725-11392982 + 31 1.23e-12 gccgcccgag tagctgggactacaggcgcc cacgaccacg chrX:81091845-81091945 - 22 1.23e-12 GCCTCCTGAG TAGCTGGGACTACAGGCGCC TGCCACCACG chr6:42549860-42549960 - 50 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CGCCACCACA chr2:56120982-56121082 + 31 1.23e-12 gcctcccgag tagctgggactacaggcgcc cgccaccacg chr8:15385900-15386000 + 31 1.23e-12 gcctcctgag tagctgggactacaggcgcc cgccaccatg chr1:44556565-44556665 + 27 1.23e-12 gtctccctag tagctgggactacaggcgcc tgcaccacgc chr3:33238627-33238727 - 48 1.23e-12 GCCTCCCAAG TAGCTGGGACTACAGGCGCC CGCCACCACG chr10:93884910-93885010 + 28 1.23e-12 gccttccaag tagctgggactacaggcgcc tgccaccacg chr12:49773616-49773716 + 33 1.23e-12 gccttctgag tagctgggactacaggcgcc caccactgca chr2:28786574-28786674 - 9 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CACTGCCA chr3:82780318-82780418 + 24 1.23e-12 gcctcccgag tagctgggactacaggcgcc cgccaccacg chr10:73784364-73784464 + 27 1.23e-12 gcctcccgag tagctgggactacaggcgcc caccaccacg chr1:179277742-179277842 - 48 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC TGCCACCACG chrY:1855179-1855279 - 41 1.23e-12 GCCTCGTGAG TAGCTGGGACTACAGGCGCC CGCCACCACA chr2:61168871-61168971 + 24 1.23e-12 gcctcctgag tagctgggactacaggcgcc tgccaccaag chr8:30892752-30892852 - 52 1.23e-12 GCCTCCCAAG TAGCTGGGACTACAGGCGCC TGCAACCACG chr6:36299323-36299423 + 35 1.23e-12 gtctcccgag tagctgggactacaggcgcc cgctaccacg chr9:119959087-119959187 - 54 1.23e-12 GCCTCCCCAG TAGCTGGGACTACAGGCGCC TGCCACCACG chr2:20127386-20127486 + 33 1.23e-12 gcctcccaag tagctgggactacaggcgcc cgccaccacg chr12:14299164-14299264 + 38 1.23e-12 gcctcccaag tagctgggactacaggcgcc caccactaca chr10:16761575-16761675 - 51 1.23e-12 GCCTCCCAAG TAGCTGGGACTACAGGCGCC TGCCACCACG chr4:108871317-108871417 + 28 1.23e-12 gcctcccgag tagctgggactacaggcgcc cgccactacg chr10:123552082-12355218 + 26 1.23e-12 gcctccagag tagctgggactacaggcgcc cgccaccatg chr2:141206300-141206400 - 54 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CGCCACCACG chr4:117950484-117950584 - 32 1.23e-12 GCCTCCCCAG TAGCTGGGACTACAGGCGCC GGCCACCACG chr3:65952532-65952632 - 49 1.23e-12 GCCTCCCGAG TAGCTGGGACTACAGGCGCC CGCCACCACG chr9:86833509-86833609 - 57 1.23e-12 GCCTCCTGAG TAGCTGGGACTACAGGCGCC TGCCACCAGG chr2:39205480-39205580 - 46 1.23e-12 GCCTCCTGAG TAGCTGGGACTACAGGCGCC TGCCACCACG chr8:86936458-86936558 - 54 1.23e-12 GCCTCCTGAG TAGCTGGGACTACAGGCGCC TACCACCACA chr5:29874329-29874429 + 52 1.23e-12 gcctcccaag tagctgggactacaggcgcc cgccaccacg chr12:110459231-11045933 + 34 2.61e-12 gcctcccgag cagctgggactacaggcgcc cgccaccatg chr8:20827012-20827112 + 31 2.61e-12 gcctccagag cagctgggactacaggcgcc caccaccacg chr1:236043516-236043616 - 47 2.61e-12 GCGTCCCGAG CAGCTGGGACTACAGGCGCC CACCACCACG chr4:26598393-26598493 + 30 2.61e-12 gcctcctgag cagctgggactacaggcgcc cgccaccacg chr14:46964919-46965019 + 32 2.61e-12 gcctcccgag cagctgggactacaggcgcc cgccaccacg chr1:238243926-238244026 - 48 2.61e-12 GCCTCCTGAG CAGCTGGGACTACAGGCGCC CACCACCACG chr3:149568761-149568861 + 33 2.61e-12 gcctcccgag cagctgggactacaggcgcc cgccaccaca chr1:45749487-45749587 + 46 2.61e-12 gcctcccgag cagctgggactacaggcgcc cgccaccacg chr7:75570290-75570390 + 30 2.61e-12 gcctcctgag cagctgggactacaggcgcc cgccaccacg chr8:87036312-87036412 - 49 2.61e-12 GCTTCCCAAG CAGCTGGGACTACAGGCGCC CACCACCACG chr11:12627341-12627441 + 36 2.61e-12 gcctcctgag cagctgggactacaggcgcc cgccaccacg chr8:108424541-108424641 + 54 2.61e-12 gcctcccgag cagctgggactacaggcgcc tgccaccacg chr2:108142161-108142261 - 53 2.61e-12 ACCTCCCGAG CAGCTGGGACTACAGGCGCC CACCACTGCG chr10:120759828-12075992 - 54 8.27e-12 GCCTCCCAAG TAGCTGGGACTACAGGTACC AGCCACCACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:133502305-133502405 1.2e-12 46_[-9]_34 chr1:247033252-247033352 1.2e-12 54_[-9]_26 chr12:86443581-86443681 1.2e-12 34_[+9]_46 chr10:10494994-10495094 1.2e-12 60_[-9]_20 chr7:142598683-142598783 1.2e-12 44_[-9]_36 chr2:72380357-72380457 1.2e-12 61_[-9]_19 chr11:113929725-11392982 1.2e-12 30_[+9]_50 chrX:81091845-81091945 1.2e-12 21_[-9]_59 chr6:42549860-42549960 1.2e-12 49_[-9]_31 chr2:56120982-56121082 1.2e-12 30_[+9]_50 chr8:15385900-15386000 1.2e-12 30_[+9]_50 chr1:44556565-44556665 1.2e-12 26_[+9]_54 chr3:33238627-33238727 1.2e-12 47_[-9]_33 chr10:93884910-93885010 1.2e-12 27_[+9]_53 chr12:49773616-49773716 1.2e-12 32_[+9]_48 chr2:28786574-28786674 1.2e-12 8_[-9]_72 chr3:82780318-82780418 1.2e-12 23_[+9]_57 chr10:73784364-73784464 1.2e-12 26_[+9]_54 chr1:179277742-179277842 1.2e-12 47_[-9]_33 chrY:1855179-1855279 1.2e-12 40_[-9]_40 chr2:61168871-61168971 1.2e-12 23_[+9]_57 chr8:30892752-30892852 1.2e-12 51_[-9]_29 chr6:36299323-36299423 1.2e-12 34_[+9]_46 chr9:119959087-119959187 1.2e-12 53_[-9]_27 chr2:20127386-20127486 1.2e-12 32_[+9]_48 chr12:14299164-14299264 1.2e-12 37_[+9]_43 chr10:16761575-16761675 1.2e-12 50_[-9]_30 chr4:108871317-108871417 1.2e-12 27_[+9]_53 chr10:123552082-12355218 1.2e-12 25_[+9]_55 chr2:141206300-141206400 1.2e-12 53_[-9]_27 chr4:117950484-117950584 1.2e-12 31_[-9]_49 chr3:65952532-65952632 1.2e-12 48_[-9]_32 chr9:86833509-86833609 1.2e-12 56_[-9]_24 chr2:39205480-39205580 1.2e-12 45_[-9]_35 chr8:86936458-86936558 1.2e-12 53_[-9]_27 chr5:29874329-29874429 1.2e-12 51_[+9]_29 chr12:110459231-11045933 2.6e-12 33_[+9]_47 chr8:20827012-20827112 2.6e-12 30_[+9]_50 chr1:236043516-236043616 2.6e-12 46_[-9]_34 chr4:26598393-26598493 2.6e-12 29_[+9]_51 chr14:46964919-46965019 2.6e-12 31_[+9]_49 chr1:238243926-238244026 2.6e-12 47_[-9]_33 chr3:149568761-149568861 2.6e-12 32_[+9]_48 chr1:45749487-45749587 2.6e-12 45_[+9]_35 chr7:75570290-75570390 2.6e-12 29_[+9]_51 chr8:87036312-87036412 2.6e-12 48_[-9]_32 chr11:12627341-12627441 2.6e-12 35_[+9]_45 chr8:108424541-108424641 2.6e-12 53_[+9]_27 chr2:108142161-108142261 2.6e-12 52_[-9]_28 chr10:120759828-12075992 8.3e-12 53_[-9]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAGCTGGGACTACAGGCGCC width=20 seqs=50 chr3:133502305-133502405 ( 47) TAGCTGGGACTACAGGCGCC 1 chr1:247033252-247033352 ( 55) TAGCTGGGACTACAGGCGCC 1 chr12:86443581-86443681 ( 35) TAGCTGGGACTACAGGCGCC 1 chr10:10494994-10495094 ( 61) TAGCTGGGACTACAGGCGCC 1 chr7:142598683-142598783 ( 45) TAGCTGGGACTACAGGCGCC 1 chr2:72380357-72380457 ( 62) TAGCTGGGACTACAGGCGCC 1 chr11:113929725-11392982 ( 31) TAGCTGGGACTACAGGCGCC 1 chrX:81091845-81091945 ( 22) TAGCTGGGACTACAGGCGCC 1 chr6:42549860-42549960 ( 50) TAGCTGGGACTACAGGCGCC 1 chr2:56120982-56121082 ( 31) TAGCTGGGACTACAGGCGCC 1 chr8:15385900-15386000 ( 31) TAGCTGGGACTACAGGCGCC 1 chr1:44556565-44556665 ( 27) TAGCTGGGACTACAGGCGCC 1 chr3:33238627-33238727 ( 48) TAGCTGGGACTACAGGCGCC 1 chr10:93884910-93885010 ( 28) TAGCTGGGACTACAGGCGCC 1 chr12:49773616-49773716 ( 33) TAGCTGGGACTACAGGCGCC 1 chr2:28786574-28786674 ( 9) TAGCTGGGACTACAGGCGCC 1 chr3:82780318-82780418 ( 24) TAGCTGGGACTACAGGCGCC 1 chr10:73784364-73784464 ( 27) TAGCTGGGACTACAGGCGCC 1 chr1:179277742-179277842 ( 48) TAGCTGGGACTACAGGCGCC 1 chrY:1855179-1855279 ( 41) TAGCTGGGACTACAGGCGCC 1 chr2:61168871-61168971 ( 24) TAGCTGGGACTACAGGCGCC 1 chr8:30892752-30892852 ( 52) TAGCTGGGACTACAGGCGCC 1 chr6:36299323-36299423 ( 35) TAGCTGGGACTACAGGCGCC 1 chr9:119959087-119959187 ( 54) TAGCTGGGACTACAGGCGCC 1 chr2:20127386-20127486 ( 33) TAGCTGGGACTACAGGCGCC 1 chr12:14299164-14299264 ( 38) TAGCTGGGACTACAGGCGCC 1 chr10:16761575-16761675 ( 51) TAGCTGGGACTACAGGCGCC 1 chr4:108871317-108871417 ( 28) TAGCTGGGACTACAGGCGCC 1 chr10:123552082-12355218 ( 26) TAGCTGGGACTACAGGCGCC 1 chr2:141206300-141206400 ( 54) TAGCTGGGACTACAGGCGCC 1 chr4:117950484-117950584 ( 32) TAGCTGGGACTACAGGCGCC 1 chr3:65952532-65952632 ( 49) TAGCTGGGACTACAGGCGCC 1 chr9:86833509-86833609 ( 57) TAGCTGGGACTACAGGCGCC 1 chr2:39205480-39205580 ( 46) TAGCTGGGACTACAGGCGCC 1 chr8:86936458-86936558 ( 54) TAGCTGGGACTACAGGCGCC 1 chr5:29874329-29874429 ( 52) TAGCTGGGACTACAGGCGCC 1 chr12:110459231-11045933 ( 34) CAGCTGGGACTACAGGCGCC 1 chr8:20827012-20827112 ( 31) CAGCTGGGACTACAGGCGCC 1 chr1:236043516-236043616 ( 47) CAGCTGGGACTACAGGCGCC 1 chr4:26598393-26598493 ( 30) CAGCTGGGACTACAGGCGCC 1 chr14:46964919-46965019 ( 32) CAGCTGGGACTACAGGCGCC 1 chr1:238243926-238244026 ( 48) CAGCTGGGACTACAGGCGCC 1 chr3:149568761-149568861 ( 33) CAGCTGGGACTACAGGCGCC 1 chr1:45749487-45749587 ( 46) CAGCTGGGACTACAGGCGCC 1 chr7:75570290-75570390 ( 30) CAGCTGGGACTACAGGCGCC 1 chr8:87036312-87036412 ( 49) CAGCTGGGACTACAGGCGCC 1 chr11:12627341-12627441 ( 36) CAGCTGGGACTACAGGCGCC 1 chr8:108424541-108424641 ( 54) CAGCTGGGACTACAGGCGCC 1 chr2:108142161-108142261 ( 53) CAGCTGGGACTACAGGCGCC 1 chr10:120759828-12075992 ( 54) TAGCTGGGACTACAGGTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 41646 bayes= 10.1909 E= 5.0e-346 -1229 -2 -1229 165 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 209 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 -1229 -1229 209 209 -1229 -1229 -1229 -1229 192 -1229 -1229 209 -1229 -1229 -1229 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 189 -1229 -355 -355 -1229 189 -1229 -1229 192 -1229 -1229 -1229 192 -1229 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 50 E= 5.0e-346 0.000000 0.260000 0.000000 0.740000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.980000 0.000000 0.020000 0.020000 0.000000 0.980000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGCTGGGACTACAGGCGCC MEME-9 regular expression -------------------------------------------------------------------------------- [TC]AGCTGGGACTACAGGCGCC -------------------------------------------------------------------------------- Time 5992.53 secs. ******************************************************************************** ******************************************************************************** MOTIF CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 width = 27 sites = 50 llr = 1368 E-value = 1.6e-345 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 Description -------------------------------------------------------------------------------- Simplified A ::a:::::11:29:91a1:3a:a:::: pos.-specific C 8a::aa::::5::9::::5::::9185 probability G 1::9:::a99:8:::8:916:a:::1: matrix T 1:::::a:::5:::::::41::::915 bits 2.1 * * 1.9 * * * * *** 1.7 ** **** * * * *** 1.5 ********* *** * ***** Relative 1.3 ********* ****** ***** Entropy 1.0 ********** ******* ****** (39.5 bits) 0.8 ****************** ******* 0.6 *************************** 0.4 *************************** 0.2 *************************** 0.0 --------------------------- Multilevel CCAGCCTGGGCGACAGAGCGAGACTCC consensus TA TA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chr5:14500000-14500071 + 19 1.67e-16 ccactgcact ccagcctgggtgacagagcgagactct gtctcaaaaa chr1:44713021-44713084 - 19 1.67e-16 CCATTGCACT CCAGCCTGGGTGACAGAGCGAGACTCC GTCTTAAAAA chr9:89308502-89308578 - 23 3.54e-16 CCACTGCACT CCAGCCTGGGCGACAGAGCGAGACTCC GTCTCAAAAA chr12:8257003-8257076 + 26 5.03e-16 ccactgtact ccagcctgggtgacagagtgagactcc atctcaaaaa chr3:182034389-182034460 - 23 8.19e-16 TCATTGCAAT CCAGCCTGGGTGACAGAGCAAGACTCT GTCTCAGAAA chrX:133002669-133002758 - 36 8.19e-16 CCATTGCACT CCAGCCTGGGCGACAGAGTGAGACTCC GAAAAAAAAA chr9:92371995-92372060 + 16 2.00e-15 ccactgtact ccagcctgggcaacagagtgagactcc atctaaaaaa chr11:47897984-47898061 + 17 2.15e-15 ccactgcact ccagcctgggcaacagagcaagactcc gtctcaaaaa chr7:76108474-76108547 + 29 2.15e-15 ccaccacact ccagcctgggcaacagagcaagactcc ttctcaaaaa chr8:96234708-96234798 + 32 4.89e-15 ccattgcact ccagcctgggcgacaaagcaagactcc gtctcaaaga chr6:52340928-52340999 - 29 9.48e-15 CCACTGCACC GCAGCCTGGGCGACAGAGTGAGACTCC ATCTCAAATG chr13:79846367-79846443 + 32 9.48e-15 ccattgaact ccagcctgggtgacagagcaagactgc gtctcaaaaa chr5:140756139-140756207 - 27 1.41e-14 CCACTGCACT TCAGCCTGGGCGACAGAGCAAGACTCT GTCTCAAAAA chr3:48765664-48765752 + 28 1.61e-14 tcactgcact ccagcctgggtgacagagtgagaccct catttcaaaa chr7:69390876-69390962 - 26 2.36e-14 CCACTGAATT CTAGCCTGGGCGACAGAGTGAGACTCT GTCTTAAAAT chr2:217764430-217764495 + 19 2.36e-14 ccactgcagt ccagcctgggcaacagagggagactcc atgtcaaaaa chr14:43074975-43075055 + 24 2.36e-14 tcactgcact ccagcctgggtgacacagcaagactct gtctcaaaaa chr14:106139512-10613958 - 30 2.36e-14 CCACTGCACT CCAGCCTGGGTGACAGAGCAAGATTCT GTCTCAAAAA chr1:91080440-91080517 + 22 2.36e-14 ccactgcact ccagcctgggcaacagagggagactcc atctcaaaaa chr11:44501863-44501940 + 26 2.64e-14 ccactgcgct ccagcctgggcgacagagtgagacact ctgtcaaaaa chr10:99986536-99986624 + 27 2.88e-14 ccactgtact ccagcctgggagacagagcaagactcc gtctcaaaaa chr9:89113431-89113510 + 27 3.26e-14 ccactgcact acagcctgggcgacagagcgagactcc atctcaaaaa chr14:80999919-80999999 - 36 5.68e-14 CCACTGCACT CCAGCCTGGGTGACAGAGCAAGAGTCT GTCTCAAAAA chr7:63432587-63432663 + 22 5.68e-14 ccactgcact ccagcgtgggtgacagagcaagactcc gtctcgataa chr3:138309675-138309746 + 27 6.90e-14 ccactgcact ccagcctgggtgacagagctagactgt ctcaaaagaa chr1:2007567-2007658 + 31 1.12e-13 caactgcact tcagcctgggcgacagaacaagactcc atctcaaaaa chr11:119995671-11999574 + 32 1.35e-13 ccactgccct gcagcctgggtgacagagcaagacttt gtctcaaaaa chr10:61496108-61496167 - 18 1.50e-13 CCACTGCACT CCAGCCTGGGTGACGGAGCTAGACTCC ATCTTTAAAA chr1:24690671-24690750 - 25 1.65e-13 TCACTGCACT CCAGCCTGGATGACAGAGTGAGACTTC ATCTCAAAAA chr9:32312451-32312528 + 16 2.46e-13 ccaccacact ccagcctgtgtgacaaagtgagactct gtctcaaaaa chr12:94883425-94883489 + 14 3.03e-13 ccatggcact ccagcctaggtgacagaatgagactct atctccaaaa chr4:136153089-136153154 - 25 3.74e-13 CCACTGCACT CCAGCCTGGGCGACCAAGCAAGACTCC ATCTCAAGCA chr11:61213110-61213179 + 25 4.14e-13 ccattgtact ccagcctgggcgacacagagagactcc agctcagaaa chr1:71745719-71745808 + 32 4.59e-13 ccactgccct ctagcctgggcgacagagcaagactat gtcaaaaacc chr9:94764861-94764961 - 35 7.30e-13 CCACTGCTCT CCACCCTGGGTGACAGAGTGAGACCCT GTCTTATAAA chr11:110139864-11013993 - 28 9.47e-13 CCACTGCACT CCAGCCTGAGTGACAAAGCGAGACTCA GTCTCAAAAA chr7:90307667-90307738 + 15 1.03e-12 ccactggact ccagcctgggtgacagagtgaggttct gtctcaaaaa chr12:132439680-13243976 - 36 1.03e-12 CTGCTGCACT GCAGCCTGGGTGACAGAGGGAGACCCT GTCACAAAAA chr3:171499931-171499999 - 24 1.31e-12 CCACTGCACT CCAGCCTCAGCAACAGAGTGAGACTCC GACTCAAAAA chrX:6526347-6526426 + 32 1.54e-12 ccactgcact ccagcctgggtgacagaccaagaatct atcttgaaaa chr1:159838189-159838271 + 30 1.81e-12 ccactgcact tcagcccgggcaacagagtgagactcc gtctcaatta chr2:25368304-25368378 - 23 2.30e-12 CCACTGCATT CCAACCTGGATGACAGAATAAGACTCT GTCTTAAAAA chrY:7027705-7027779 + 18 2.69e-12 ccaccgcact ccagcctgggcgacagaacgacacttc atctcaaaaa chr3:48400264-48400351 - 36 4.00e-12 CCACCACACT CCAGCCTGAGCAGCAGAATGAGACTCT GTCTCAAAAA chr1:160234190-160234257 + 21 4.34e-12 ccactgtact ccagcctgagcaaaagagtgagactgc acctcaaaaa chr8:141665190-141665263 - 21 7.07e-12 CCAGTGCTCT CCAGCCTGGGCCCCAGAGCTAGACTCT GTCTCCAAAA chr5:40933924-40934016 - 35 9.66e-12 CCACTGCACT CCAGCCTGGGCAATAAAGTGAGACACC GTCTCAAAAA chr2:212099204-212099270 + 15 3.68e-11 ccactgcact gcagcctgggtgaaaaagccagactgt gtctcaaata chr6:43595957-43596030 + 28 7.28e-11 ccactgcact ccaacctggatgacggagtgtgactct gtctcaaaaa chr8:80286977-80287058 - 32 1.03e-09 CCACTGCAGT CCAGCATGGCCAGCAGAGCCAGACTAC GTCTCAAAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:14500000-14500071 1.7e-16 18_[+10]_26 chr1:44713021-44713084 1.7e-16 18_[-10]_18 chr9:89308502-89308578 3.5e-16 22_[-10]_27 chr12:8257003-8257076 5e-16 25_[+10]_21 chr3:182034389-182034460 8.2e-16 22_[-10]_22 chrX:133002669-133002758 8.2e-16 35_[-10]_27 chr9:92371995-92372060 2e-15 15_[+10]_23 chr11:47897984-47898061 2.1e-15 16_[+10]_34 chr7:76108474-76108547 2.1e-15 28_[+10]_18 chr8:96234708-96234798 4.9e-15 31_[+10]_32 chr6:52340928-52340999 9.5e-15 28_[-10]_16 chr13:79846367-79846443 9.5e-15 31_[+10]_18 chr5:140756139-140756207 1.4e-14 26_[-10]_15 chr3:48765664-48765752 1.6e-14 27_[+10]_34 chr7:69390876-69390962 2.4e-14 25_[-10]_34 chr2:217764430-217764495 2.4e-14 18_[+10]_20 chr14:43074975-43075055 2.4e-14 23_[+10]_30 chr14:106139512-10613958 2.4e-14 29_[-10]_12 chr1:91080440-91080517 2.4e-14 21_[+10]_29 chr11:44501863-44501940 2.6e-14 25_[+10]_25 chr10:99986536-99986624 2.9e-14 26_[+10]_35 chr9:89113431-89113510 3.3e-14 26_[+10]_26 chr14:80999919-80999999 5.7e-14 35_[-10]_18 chr7:63432587-63432663 5.7e-14 21_[+10]_28 chr3:138309675-138309746 6.9e-14 26_[+10]_18 chr1:2007567-2007658 1.1e-13 30_[+10]_34 chr11:119995671-11999574 1.3e-13 31_[+10]_19 chr10:61496108-61496167 1.5e-13 17_[-10]_15 chr1:24690671-24690750 1.6e-13 24_[-10]_28 chr9:32312451-32312528 2.5e-13 15_[+10]_35 chr12:94883425-94883489 3e-13 13_[+10]_24 chr4:136153089-136153154 3.7e-13 24_[-10]_14 chr11:61213110-61213179 4.1e-13 24_[+10]_18 chr1:71745719-71745808 4.6e-13 31_[+10]_31 chr9:94764861-94764961 7.3e-13 34_[-10]_39 chr11:110139864-11013993 9.5e-13 27_[-10]_16 chr7:90307667-90307738 1e-12 14_[+10]_30 chr12:132439680-13243976 1e-12 35_[-10]_22 chr3:171499931-171499999 1.3e-12 23_[-10]_18 chrX:6526347-6526426 1.5e-12 31_[+10]_21 chr1:159838189-159838271 1.8e-12 29_[+10]_26 chr2:25368304-25368378 2.3e-12 22_[-10]_25 chrY:7027705-7027779 2.7e-12 17_[+10]_30 chr3:48400264-48400351 4e-12 35_[-10]_25 chr1:160234190-160234257 4.3e-12 20_[+10]_20 chr8:141665190-141665263 7.1e-12 20_[-10]_26 chr5:40933924-40934016 9.7e-12 34_[-10]_31 chr2:212099204-212099270 3.7e-11 14_[+10]_25 chr6:43595957-43596030 7.3e-11 27_[+10]_19 chr8:80286977-80287058 1e-09 31_[-10]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAGCCTGGGYGACAGAGYRAGACTCY width=27 seqs=50 chr5:14500000-14500071 ( 19) CCAGCCTGGGTGACAGAGCGAGACTCT 1 chr1:44713021-44713084 ( 19) CCAGCCTGGGTGACAGAGCGAGACTCC 1 chr9:89308502-89308578 ( 23) CCAGCCTGGGCGACAGAGCGAGACTCC 1 chr12:8257003-8257076 ( 26) CCAGCCTGGGTGACAGAGTGAGACTCC 1 chr3:182034389-182034460 ( 23) CCAGCCTGGGTGACAGAGCAAGACTCT 1 chrX:133002669-133002758 ( 36) CCAGCCTGGGCGACAGAGTGAGACTCC 1 chr9:92371995-92372060 ( 16) CCAGCCTGGGCAACAGAGTGAGACTCC 1 chr11:47897984-47898061 ( 17) CCAGCCTGGGCAACAGAGCAAGACTCC 1 chr7:76108474-76108547 ( 29) CCAGCCTGGGCAACAGAGCAAGACTCC 1 chr8:96234708-96234798 ( 32) CCAGCCTGGGCGACAAAGCAAGACTCC 1 chr6:52340928-52340999 ( 29) GCAGCCTGGGCGACAGAGTGAGACTCC 1 chr13:79846367-79846443 ( 32) CCAGCCTGGGTGACAGAGCAAGACTGC 1 chr5:140756139-140756207 ( 27) TCAGCCTGGGCGACAGAGCAAGACTCT 1 chr3:48765664-48765752 ( 28) CCAGCCTGGGTGACAGAGTGAGACCCT 1 chr7:69390876-69390962 ( 26) CTAGCCTGGGCGACAGAGTGAGACTCT 1 chr2:217764430-217764495 ( 19) CCAGCCTGGGCAACAGAGGGAGACTCC 1 chr14:43074975-43075055 ( 24) CCAGCCTGGGTGACACAGCAAGACTCT 1 chr14:106139512-10613958 ( 30) CCAGCCTGGGTGACAGAGCAAGATTCT 1 chr1:91080440-91080517 ( 22) CCAGCCTGGGCAACAGAGGGAGACTCC 1 chr11:44501863-44501940 ( 26) CCAGCCTGGGCGACAGAGTGAGACACT 1 chr10:99986536-99986624 ( 27) CCAGCCTGGGAGACAGAGCAAGACTCC 1 chr9:89113431-89113510 ( 27) ACAGCCTGGGCGACAGAGCGAGACTCC 1 chr14:80999919-80999999 ( 36) CCAGCCTGGGTGACAGAGCAAGAGTCT 1 chr7:63432587-63432663 ( 22) CCAGCGTGGGTGACAGAGCAAGACTCC 1 chr3:138309675-138309746 ( 27) CCAGCCTGGGTGACAGAGCTAGACTGT 1 chr1:2007567-2007658 ( 31) TCAGCCTGGGCGACAGAACAAGACTCC 1 chr11:119995671-11999574 ( 32) GCAGCCTGGGTGACAGAGCAAGACTTT 1 chr10:61496108-61496167 ( 18) CCAGCCTGGGTGACGGAGCTAGACTCC 1 chr1:24690671-24690750 ( 25) CCAGCCTGGATGACAGAGTGAGACTTC 1 chr9:32312451-32312528 ( 16) CCAGCCTGTGTGACAAAGTGAGACTCT 1 chr12:94883425-94883489 ( 14) CCAGCCTAGGTGACAGAATGAGACTCT 1 chr4:136153089-136153154 ( 25) CCAGCCTGGGCGACCAAGCAAGACTCC 1 chr11:61213110-61213179 ( 25) CCAGCCTGGGCGACACAGAGAGACTCC 1 chr1:71745719-71745808 ( 32) CTAGCCTGGGCGACAGAGCAAGACTAT 1 chr9:94764861-94764961 ( 35) CCACCCTGGGTGACAGAGTGAGACCCT 1 chr11:110139864-11013993 ( 28) CCAGCCTGAGTGACAAAGCGAGACTCA 1 chr7:90307667-90307738 ( 15) CCAGCCTGGGTGACAGAGTGAGGTTCT 1 chr12:132439680-13243976 ( 36) GCAGCCTGGGTGACAGAGGGAGACCCT 1 chr3:171499931-171499999 ( 24) CCAGCCTCAGCAACAGAGTGAGACTCC 1 chrX:6526347-6526426 ( 32) CCAGCCTGGGTGACAGACCAAGAATCT 1 chr1:159838189-159838271 ( 30) TCAGCCCGGGCAACAGAGTGAGACTCC 1 chr2:25368304-25368378 ( 23) CCAACCTGGATGACAGAATAAGACTCT 1 chrY:7027705-7027779 ( 18) CCAGCCTGGGCGACAGAACGACACTTC 1 chr3:48400264-48400351 ( 36) CCAGCCTGAGCAGCAGAATGAGACTCT 1 chr1:160234190-160234257 ( 21) CCAGCCTGAGCAAAAGAGTGAGACTGC 1 chr8:141665190-141665263 ( 21) CCAGCCTGGGCCCCAGAGCTAGACTCT 1 chr5:40933924-40934016 ( 35) CCAGCCTGGGCAATAAAGTGAGACACC 1 chr2:212099204-212099270 ( 15) GCAGCCTGGGTGAAAAAGCCAGACTGT 1 chr6:43595957-43596030 ( 28) CCAACCTGGATGACGGAGTGTGACTCT 1 chr8:80286977-80287058 ( 32) CCAGCATGGCCAGCAGAGCCAGACTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 37446 bayes= 11.1563 E= 1.6e-345 -355 167 -172 -197 -1229 186 -1229 -256 209 -1229 -1229 -1229 -256 -372 183 -1229 -1229 192 -1229 -1229 -355 186 -372 -1229 -1229 -372 -1229 206 -355 -372 186 -1229 -156 -1229 177 -355 -197 -372 180 -1229 -355 92 -1229 103 -10 -372 152 -1229 200 -372 -272 -1229 -256 183 -1229 -355 200 -372 -272 -1229 -97 -272 167 -1229 209 -1229 -1229 -1229 -124 -372 173 -1229 -355 103 -214 69 53 -272 108 -197 206 -1229 -1229 -355 -1229 -372 189 -1229 206 -1229 -372 -1229 -355 180 -372 -256 -256 -214 -1229 193 -256 163 -172 -197 -355 98 -1229 97 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 50 E= 1.6e-345 0.020000 0.840000 0.080000 0.060000 0.000000 0.960000 0.000000 0.040000 1.000000 0.000000 0.000000 0.000000 0.040000 0.020000 0.940000 0.000000 0.000000 1.000000 0.000000 0.000000 0.020000 0.960000 0.020000 0.000000 0.000000 0.020000 0.000000 0.980000 0.020000 0.020000 0.960000 0.000000 0.080000 0.000000 0.900000 0.020000 0.060000 0.020000 0.920000 0.000000 0.020000 0.500000 0.000000 0.480000 0.220000 0.020000 0.760000 0.000000 0.940000 0.020000 0.040000 0.000000 0.040000 0.940000 0.000000 0.020000 0.940000 0.020000 0.040000 0.000000 0.120000 0.040000 0.840000 0.000000 1.000000 0.000000 0.000000 0.000000 0.100000 0.020000 0.880000 0.000000 0.020000 0.540000 0.060000 0.380000 0.340000 0.040000 0.560000 0.060000 0.980000 0.000000 0.000000 0.020000 0.000000 0.020000 0.980000 0.000000 0.980000 0.000000 0.020000 0.000000 0.020000 0.920000 0.020000 0.040000 0.040000 0.060000 0.000000 0.900000 0.040000 0.820000 0.080000 0.060000 0.020000 0.520000 0.000000 0.460000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGCCTGGGYGACAGAGYRAGACTCY MEME-10 regular expression -------------------------------------------------------------------------------- CCAGCCTGGG[CT][GA]ACAGAG[CT][GA]AGACTC[CT] -------------------------------------------------------------------------------- Time 6563.73 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:91080440-91080517 1.52e-28 3_[-7(3.77e-13)]_14_[+2(1.02e-10)]_\ 7 chr7:4699285-4699351 1.45e-18 [-2(1.29e-09)]_12_[+7(6.37e-08)]_1 chr11:67141384-67141484 1.35e-45 1_[+2(2.74e-17)]_21_[-9(9.38e-12)]_\ 3_[+6(3.08e-12)]_2 chr5:53605732-53605832 1.72e-40 5_[+1(3.33e-15)]_14_[-9(8.49e-09)]_\ 5_[-8(7.69e-14)]_3 chr8:127188699-127188799 4.10e-32 [+3(9.95e-06)]_10_[-9(4.82e-12)]_3_\ [+6(7.69e-14)]_14 chr1:7890076-7890141 8.96e-11 17_[+10(2.13e-11)]_21 chr3:2677329-2677397 3.58e-08 26_[-10(4.59e-13)]_15 chr15:30845982-30846059 1.02e-17 7_[-7(6.14e-14)]_14_[+2(6.20e-06)]_\ 3 chrY:56832983-56833038 2.03e-19 23_[+5(2.73e-14)] chr5:139012418-139012460 1.72e-01 5_[+9(9.10e-06)]_17 chr5:93225021-93225121 2.65e-22 2_[+1(1.03e-09)]_22_[-9(5.45e-11)]_\ 3_[+6(3.08e-12)] chr9:6630159-6630259 1.11e-27 35_[-5(4.82e-18)]_33 chr2:108142161-108142261 2.21e-47 [+2(7.29e-16)]_21_[-9(2.61e-12)]_3_\ [+6(3.08e-12)]_3 chr1:170603802-170603902 1.13e-30 5_[-6(5.94e-11)]_3_[+9(4.82e-12)]_\ 19_[-3(5.71e-15)] chr14:37739881-37739981 1.78e-54 2_[+2(1.11e-19)]_21_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_1 chr2:173283868-173283952 2.79e-25 12_[-5(3.09e-17)]_40 chr9:61962019-61962119 9.14e-34 5_[+2(1.49e-18)]_25_[-9(7.29e-12)]_\ 19 chr3:90178165-90178265 4.52e-20 21_[+9(1.32e-09)]_25_[-1(1.97e-13)]_\ 3 chr11:9345150-9345250 2.13e-43 9_[+3(3.42e-16)]_11_[-9(2.29e-10)]_\ 5_[-8(1.46e-13)]_2 chr2:130352898-130352998 6.60e-31 49_[-6(7.69e-14)]_3_[+9(7.29e-12)]_\ 6 chrX:6526347-6526426 2.86e-28 5_[-5(2.49e-17)]_42 chr3:78859800-78859900 7.24e-56 7_[+1(1.11e-19)]_14_[-9(2.15e-09)]_\ 5_[-8(7.69e-14)]_1 chr1:24690671-24690750 9.63e-39 2_[-2(3.25e-13)]_12_[+5(9.01e-18)]_\ 2 chr9:11695307-11695407 4.65e-56 4_[+3(3.72e-16)]_10_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)]_10 chr13:70007399-70007455 6.32e-04 13_[+10(2.74e-07)]_16 chr5:71196562-71196662 1.04e-41 9_[-6(7.69e-14)]_3_[+9(7.29e-12)]_\ 12_[-3(4.28e-13)]_3 chr12:95164229-95164329 5.41e-34 40_[+5(9.03e-20)]_28 chr9:87365319-87365419 6.57e-44 7_[+3(4.44e-17)]_11_[-9(4.82e-12)]_\ 3_[+6(5.07e-12)]_6 chr6:33230395-33230495 5.99e-40 5_[+2(1.08e-18)]_21_[-9(2.29e-10)]_\ 23 chr12:111622106-11162220 1.07e-50 2_[-6(7.69e-14)]_3_[+9(4.02e-09)]_\ 19_[-2(2.11e-19)]_3 chrY:10794944-10795007 3.82e-08 34_[+7(1.97e-11)]_7 chr3:133017982-133018082 7.50e-32 32_[-5(7.74e-19)]_36 chr14:72090045-72090133 7.92e-41 9_[-5(4.28e-16)]_12_[+2(8.63e-12)]_\ 4 chr1:37786143-37786243 3.58e-42 8_[-6(3.08e-12)]_3_[+9(3.53e-10)]_\ 13_[-1(2.59e-13)]_3 chr2:72209408-72209508 1.05e-28 [-4(2.01e-06)]_20_[-5(4.82e-18)]_26 chr12:74694922-74695022 4.30e-27 7_[+2(2.94e-14)]_25_[-9(2.61e-12)]_\ 17 chr2:87877522-87877622 1.99e-34 3_[+3(2.55e-08)]_12_[-9(4.82e-12)]_\ 3_[+6(3.08e-12)]_9 chrY:56836194-56836250 5.42e-26 24_[+5(5.58e-19)] chr4:139293930-139294030 4.39e-40 6_[+8(2.32e-10)]_5_[+9(2.61e-12)]_\ 16_[-1(4.44e-14)] chrX:119771159-119771259 2.17e-23 37_[-5(2.30e-14)]_31 chr6:136317897-136317974 1.42e-28 17_[-10(8.19e-16)]_33 chr7:138387138-138387238 1.63e-31 17_[-6(7.69e-14)]_3_[+9(1.57e-10)]_\ 38 chr5:11567146-11567232 1.23e-30 12_[-2(2.91e-11)]_14_[+7(6.40e-12)]_\ 7 chr6:160599062-160599162 1.92e-52 14_[+3(4.22e-19)]_10_[-9(7.29e-12)]_\ 3_[+6(5.94e-11)] chrY:7027705-7027779 4.91e-16 17_[+10(2.69e-12)]_30 chrY:10896205-10896270 9.39e-22 33_[+5(6.47e-16)] chr10:58991331-58991431 8.03e-52 2_[+8(3.77e-12)]_5_[+9(4.82e-12)]_\ 13_[-1(1.39e-18)]_7 chr11:29502996-29503056 1.31e-07 [-7(7.94e-09)]_38 chr5:29874329-29874429 2.96e-30 26_[-6(7.69e-14)]_3_[+9(1.23e-12)]_\ 29 chr15:20347115-20347215 3.07e-45 3_[+8(1.46e-13)]_5_[+9(1.34e-07)]_\ 14_[-1(4.35e-19)]_5 chrY:10688706-10688759 8.72e-16 21_[+5(3.94e-15)] chr2:197966845-197966945 3.50e-32 36_[+5(6.30e-19)]_32 chr12:54344297-54344397 4.51e-51 2_[+1(6.16e-16)]_13_[-9(4.82e-12)]_\ 10_[-4(1.16e-13)]_2 chrY:10846784-10846840 6.63e-27 24_[+5(2.65e-17)] chr6:15093621-15093721 2.23e-47 5_[+1(4.35e-19)]_16_[-9(3.63e-08)]_\ 3_[+6(7.69e-14)]_3 chr9:871338-871438 7.10e-19 24_[+9(5.55e-09)]_23_[-1(6.13e-12)]_\ 2 chr7:72483935-72484009 6.60e-25 34_[+5(8.68e-17)]_8 chr4:81430034-81430134 2.41e-37 2_[+3(9.30e-13)]_10_[-9(2.61e-12)]_\ 5_[-8(2.83e-13)]_10 chr13:92182623-92182723 9.05e-26 32_[-9(6.48e-10)]_5_[-8(3.69e-13)]_\ 21 chr4:34749010-34749090 1.78e-39 1_[-5(1.27e-17)]_12_[+2(1.55e-09)]_\ 4 chr8:86936458-86936558 4.37e-37 5_[+1(1.95e-14)]_17_[-9(1.23e-12)]_\ 5_[-8(1.46e-13)] chrX:133002669-133002758 2.63e-36 13_[-2(2.94e-06)]_12_[+5(9.01e-18)]_\ 1 chr9:19168445-19168545 2.52e-28 2_[+1(2.69e-09)]_18_[-9(1.26e-10)]_\ 5_[-8(7.69e-14)]_2 chr8:5583965-5584065 2.56e-59 3_[-6(5.07e-12)]_3_[+9(7.29e-12)]_\ 20_[-2(8.47e-19)]_1 chr1:12000000-12000100 4.64e-26 28_[-5(4.14e-18)]_40 chr2:39205480-39205580 5.01e-54 [+1(1.01e-17)]_14_[-9(1.23e-12)]_5_\ [-8(7.69e-14)]_8 chr4:116868270-116868356 7.53e-33 [-2(5.44e-07)]_10_[+5(2.00e-15)]_13 chrY:10953084-10953139 7.75e-18 23_[+5(3.25e-14)] chr10:23125623-23125723 2.52e-40 1_[-2(3.37e-13)]_12_[+5(9.03e-20)]_\ 24 chrY:10664870-10664929 1.01e-03 15_[-10(5.96e-09)]_17 chr9:129018612-129018712 6.84e-57 12_[+3(1.82e-18)]_10_[-9(2.59e-05)]_\ 2_[+6(7.69e-14)]_3 chr6:19491581-19491678 1.43e-39 1_[-2(6.26e-12)]_12_[+5(1.71e-19)]_\ 21 chr8:16076511-16076611 9.34e-43 1_[-6(3.08e-12)]_3_[+9(3.10e-09)]_\ 21_[-2(3.66e-16)]_2 chr8:116462031-116462131 2.88e-32 12_[-6(7.69e-14)]_3_[+9(1.26e-10)]_\ 11_[-3(1.99e-10)]_1 chrY:10629763-10629831 1.17e-19 36_[+5(1.92e-14)] chr13:89718507-89718607 2.19e-33 8_[+2(8.47e-19)]_23_[-9(7.29e-12)]_\ 18 chr3:79331860-79331960 8.01e-34 2_[+1(1.30e-09)]_15_[-9(1.26e-10)]_\ 10_[-4(4.11e-12)] chr9:98012744-98012844 3.97e-36 22_[+9(7.85e-11)]_20_[-2(2.73e-16)]_\ 7 chr2:32656982-32657082 2.40e-23 21_[+4(5.79e-12)]_10_[+9(1.57e-10)]_\ 27 chr9:32312451-32312528 7.95e-28 33_[+2(1.24e-14)]_13 chr4:84168672-84168772 1.97e-28 [+3(2.22e-18)]_10_[-9(7.29e-12)]_3_\ [+6(7.17e-08)]_14 chr14:47298677-47298777 1.01e-41 4_[+8(7.69e-14)]_5_[+9(4.82e-12)]_\ 16_[-1(5.13e-16)]_2 chr3:166895595-166895695 2.59e-36 26_[+5(9.11e-19)]_20_[+4(1.16e-13)] chr1:13265414-13265466 1.24e-01 16_[-9(9.10e-06)]_16 chr5:106464842-106464942 6.90e-28 28_[-5(1.36e-18)]_40 chr9:86833509-86833609 2.71e-18 8_[+1(3.34e-10)]_17_[-9(1.23e-12)]_\ 24 chr14:21273239-21273306 3.52e-19 26_[+5(2.64e-15)]_9 chrX:132255150-132255219 4.16e-09 23_[+10(6.90e-14)]_19 chr12:121622365-12162242 1.16e-02 6_[-7(4.19e-07)]_27 chr6:7652151-7652251 3.14e-48 12_[+5(9.03e-20)]_27_[-6(7.69e-14)]_\ 7 chr4:1442888-1442988 2.29e-47 7_[-6(7.69e-14)]_3_[+9(2.29e-10)]_\ 17_[-1(1.68e-16)] chr7:122463324-122463424 1.84e-28 28_[+5(4.14e-18)]_40 chr13:24621895-24621995 4.32e-36 4_[-6(7.69e-14)]_3_[+9(5.45e-11)]_\ 15_[-1(6.22e-11)]_5 chr5:83516160-83516260 1.94e-37 6_[-4(6.14e-14)]_20_[-5(3.05e-15)]_\ 20 chr11:65709460-65709531 4.74e-18 1_[-2(8.07e-05)]_12_[+7(1.30e-13)]_\ 5 chr5:52912754-52912854 1.20e-48 [-6(7.66e-10)]_3_[+9(1.44e-08)]_20_\ [-2(4.35e-19)]_4 chr13:79846367-79846443 9.56e-24 31_[+10(9.48e-15)]_18 chr9:111890900-111890930 1.20e-01 30 chr15:30844974-30845029 3.26e-16 7_[-7(6.14e-14)]_26 chr6:62656211-62656311 3.34e-49 19_[-5(9.03e-20)]_12_[+2(2.36e-13)]_\ 6 chr3:104863386-104863486 4.24e-51 6_[+3(2.27e-15)]_10_[-9(2.61e-12)]_\ 10_[-4(6.14e-14)]_1 chr8:108424541-108424641 8.37e-32 21_[+4(6.14e-14)]_10_[+9(2.61e-12)]_\ 27 chr1:18247045-18247125 1.43e-34 6_[-2(1.22e-11)]_14_[+7(1.30e-13)]_\ 7 chrY:1048875-1048958 1.85e-15 6_[-7(7.94e-09)]_13_[+2(6.90e-07)]_\ 11 chr9:39148526-39148626 8.16e-62 3_[-6(3.08e-12)]_3_[+9(5.45e-11)]_\ 20_[-2(4.35e-19)]_1 chr14:104828414-10482851 2.77e-28 35_[+5(5.67e-18)]_33 chr5:152798315-152798393 2.95e-34 3_[-5(2.12e-18)]_12_[+2(2.10e-12)] chr15:41394620-41394700 5.83e-23 9_[-2(1.24e-14)]_40 chr1:71745719-71745808 7.40e-27 5_[-5(3.97e-16)]_10_[+2(2.60e-05)]_\ 11 chr11:40472013-40472113 5.61e-28 [+3(7.36e-08)]_10_[-9(5.55e-09)]_10_\ [-4(4.11e-12)]_7 chrY:10652289-10652344 1.32e-21 23_[+5(6.46e-13)] chr2:60657648-60657733 1.39e-33 1_[-5(3.25e-14)]_11_[+2(3.25e-13)]_\ 10 chr3:65952532-65952632 4.14e-55 3_[+1(4.22e-16)]_14_[-9(1.23e-12)]_\ 10_[-4(6.14e-14)] chr3:141034513-141034613 2.51e-30 11_[+4(6.14e-14)]_10_[+9(1.26e-10)]_\ 37 chr2:132932921-132933021 2.18e-31 10_[+4(6.14e-14)]_10_[+9(7.29e-12)]_\ 38 chr15:41704377-41704477 7.95e-56 3_[+1(6.47e-19)]_14_[-9(7.29e-12)]_\ 5_[-8(2.83e-13)]_5 chr12:14215106-14215206 7.51e-51 1_[+2(4.35e-19)]_20_[-9(4.82e-12)]_\ 5_[-8(3.77e-12)]_1 chrX:98400090-98400190 2.62e-31 33_[-5(2.52e-19)]_35 chr2:26773218-26773318 3.08e-41 5_[+1(1.44e-14)]_17_[-9(2.61e-12)]_\ 5_[-8(7.69e-14)] chr11:119995671-11999574 2.73e-25 5_[-5(1.72e-15)]_40 chr4:182262716-182262816 1.39e-27 20_[+8(2.83e-13)]_5_[+9(7.29e-12)]_\ 33 chrY:10978060-10978115 2.20e-20 23_[+5(1.04e-14)] chr5:160124328-160124428 2.78e-45 9_[+2(2.11e-19)]_20_[-9(1.26e-10)]_\ 20 chr15:41385044-41385144 2.83e-34 2_[+1(2.18e-14)]_18_[-9(4.82e-12)]_\ 3_[+6(5.94e-11)]_4 chr2:225175285-225175351 4.38e-07 [-10(2.46e-13)]_39 chr4:81068971-81069068 1.78e-39 5_[-2(3.05e-09)]_12_[+5(1.67e-17)]_\ 17 chr12:132439680-13243976 3.75e-21 13_[-2(1.43e-09)]_14_[+7(1.84e-09)]_\ 4 chrY:11003370-11003443 2.88e-15 20_[-10(3.68e-11)]_26 chr1:16490100-16490172 6.57e-20 5_[-2(1.98e-08)]_14_[+7(1.37e-11)] chr7:5904550-5904650 9.12e-47 10_[+1(4.98e-17)]_14_[-9(2.61e-12)]_\ 3_[+6(3.08e-12)] chr4:117950484-117950584 8.92e-33 31_[-9(1.23e-12)]_10_[-4(6.14e-14)]_\ 17 chr6:155512308-155512408 5.94e-31 [-2(3.80e-06)]_10_[+5(1.27e-17)]_27 chr9:85630406-85630461 3.89e-10 15_[-10(8.19e-16)]_13 chr8:106757202-106757302 1.18e-35 15_[+9(2.61e-12)]_24_[-2(1.11e-19)]_\ 10 chr14:106139512-10613958 1.64e-23 29_[-10(2.36e-14)]_12 chrY:10968639-10968702 4.56e-16 31_[+5(2.23e-12)] chr10:36609967-36610067 2.40e-47 2_[+4(4.12e-11)]_10_[+9(4.82e-12)]_\ 11_[-3(1.80e-17)]_4 chr1:145631204-145631267 1.27e-29 2_[-5(3.09e-17)]_29 chr4:47400921-47401021 7.03e-38 1_[-2(2.36e-13)]_12_[+5(3.71e-17)]_\ 24 chr8:5142174-5142247 7.28e-32 3_[-3(3.10e-06)]_1_[+5(5.67e-18)]_6 chr7:121047717-121047817 2.52e-30 10_[+4(6.14e-14)]_35_[-3(5.42e-08)]_\ 2 chr2:126904912-126905012 8.66e-52 5_[+3(1.29e-16)]_10_[-9(7.29e-12)]_\ 3_[+6(3.08e-12)]_9 chr8:17038694-17038794 4.64e-30 34_[-9(1.26e-10)]_3_[+6(7.69e-14)]_\ 21 chr12:32523692-32523792 7.12e-28 1_[+2(1.24e-14)]_24_[-9(7.29e-12)]_\ 24 chr6:134656753-134656853 9.82e-66 2_[+2(2.11e-19)]_20_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_2 chrY:10949842-10949902 5.68e-15 7_[-10(9.71e-10)]_26 chr3:195476340-195476440 2.47e-41 1_[+8(1.46e-13)]_5_[+9(4.82e-12)]_\ 18_[-1(3.01e-16)]_3 chr6:168726838-168726938 6.03e-28 18_[+4(6.14e-14)]_8_[+9(7.94e-08)]_\ 32 chr7:57492308-57492366 1.07e-10 6_[-7(1.12e-10)]_30 chr5:40356724-40356772 7.21e-07 17_[+10(2.26e-10)]_4 chrY:11029213-11029268 9.46e-14 23_[+5(1.12e-10)] chr5:9840893-9840993 6.10e-32 25_[+5(7.67e-18)]_20_[+4(6.14e-14)]_\ 1 chrY:10781177-10781241 4.07e-18 32_[+5(2.13e-12)] chrX:73908636-73908736 4.39e-35 11_[-2(1.49e-10)]_12_[+5(1.60e-14)]_\ 14 chr5:99909767-99909867 1.46e-43 9_[+2(2.11e-19)]_21_[-9(2.61e-12)]_\ 19 chr2:89130434-89130534 1.29e-27 1_[+7(7.19e-07)]_37_[-6(7.69e-14)]_\ 18 chr4:5069185-5069285 4.65e-43 4_[-2(3.37e-13)]_12_[+5(5.30e-17)]_\ 21 chr6:7306135-7306235 3.60e-53 [+4(6.14e-14)]_10_[+9(7.29e-12)]_15_\ [-1(4.93e-15)]_2 chr13:99096491-99096591 2.46e-38 1_[+3(1.87e-12)]_10_[-9(7.29e-12)]_\ 5_[-8(7.69e-14)]_11 chr8:128240096-128240196 1.69e-38 2_[+1(3.06e-14)]_14_[-9(5.55e-09)]_\ 10_[-4(1.02e-10)]_1 chr5:21669465-21669520 2.22e-23 8_[+5(1.71e-19)]_15 chr1:44875141-44875211 2.72e-27 [-7(6.14e-14)]_14_[+2(7.38e-12)]_3 chr2:203210381-203210481 3.13e-44 1_[+2(4.35e-19)]_23_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)] chr3:81877268-81877368 5.51e-27 34_[+5(2.52e-19)]_34 chrX:52798733-52798833 2.79e-53 9_[+1(1.11e-19)]_14_[-9(8.49e-09)]_\ 3_[+6(7.69e-14)]_1 chr8:97998239-97998339 1.75e-29 4_[+1(3.51e-09)]_16_[-9(1.26e-10)]_\ 5_[-8(7.69e-14)]_2 chrX:17880008-17880108 6.54e-41 1_[+3(4.68e-14)]_12_[-9(5.45e-11)]_\ 10_[-4(6.14e-14)]_4 chr1:28511389-28511489 8.43e-37 18_[+9(3.53e-10)]_11_[-3(9.82e-18)]_\ 20 chr6:112860999-112861099 7.76e-46 15_[+1(1.11e-19)]_14_[-9(1.26e-10)]_\ 20 chr11:12627341-12627441 2.12e-54 8_[+8(3.77e-12)]_5_[+9(2.61e-12)]_\ 14_[-1(1.11e-19)] chr6:17249723-17249807 1.50e-41 4_[-5(3.32e-19)]_12_[+2(1.16e-07)]_\ 5 chr11:26849731-26849831 7.85e-15 19_[+9(4.82e-12)]_30_[-3(2.11e-13)] chr7:76345185-76345285 3.98e-40 3_[-6(2.17e-09)]_3_[+9(7.29e-12)]_\ 21_[-2(2.74e-17)] chrY:11034164-11034237 6.98e-14 41_[+5(3.33e-11)] chr5:6168341-6168413 1.56e-28 [-7(2.46e-13)]_14_[+2(4.76e-13)]_5 chr10:38919978-38920033 2.28e-06 25_[+10(4.36e-10)]_3 chr6:53576464-53576564 4.64e-28 9_[+2(1.49e-18)]_19_[-9(4.82e-12)]_\ 21 chr10:15739086-15739155 1.32e-20 2_[-7(2.38e-12)]_14_[+2(1.29e-08)] chr6:33230738-33230750 1.00e+00 12 chr2:141206300-141206400 3.37e-31 4_[+1(1.68e-16)]_18_[-9(1.23e-12)]_\ 3_[+6(4.52e-08)]_2 chr9:120743660-120743745 1.92e-47 5_[-5(9.03e-20)]_12_[+2(8.63e-12)]_\ 5 chr15:30846092-30846149 3.14e-29 [-5(5.58e-19)]_25 chr2:74024935-74025035 1.04e-45 3_[+2(1.11e-19)]_21_[-9(4.00e-10)]_\ 3_[+6(3.08e-12)] chr1:92734465-92734562 1.63e-41 6_[-2(3.84e-13)]_12_[+5(8.68e-17)]_\ 16 chr15:30048379-30048479 4.35e-30 36_[-9(2.61e-12)]_10_[-4(6.14e-14)]_\ 12 chr12:10411404-10411504 1.28e-18 20_[+6(5.07e-12)]_36_[-7(1.76e-07)] chr1:104291685-104291785 8.61e-41 3_[-6(7.69e-14)]_7_[+9(4.82e-12)]_\ 16_[-1(3.78e-14)]_1 chr10:123552082-12355218 4.06e-22 [-6(1.37e-10)]_3_[+9(1.23e-12)]_23_\ [-1(2.62e-08)]_1 chr1:156028668-156028768 5.35e-59 2_[-6(3.08e-12)]_3_[+9(7.29e-12)]_\ 21_[-2(2.02e-18)]_1 chr1:44713021-44713084 3.47e-16 18_[-10(1.67e-16)]_18 chr8:87036312-87036412 2.92e-53 7_[+3(2.21e-16)]_10_[-9(2.61e-12)]_\ 10_[-4(2.33e-13)] chr4:35354740-35354840 6.99e-45 7_[+3(2.74e-17)]_11_[-9(3.53e-10)]_\ 3_[+6(7.69e-14)]_6 chr9:67218341-67218441 1.15e-58 1_[+2(4.35e-19)]_20_[-9(5.45e-11)]_\ 3_[+6(5.94e-11)]_3 chr7:100044386-100044486 3.19e-19 [+3(1.75e-08)]_24_[-9(7.29e-12)]_3_\ [+6(7.69e-14)] chr13:22723569-22723669 1.44e-47 [-6(5.94e-11)]_3_[+9(3.53e-10)]_21_\ [-2(2.02e-18)]_3 chr4:108871317-108871417 6.51e-59 2_[-6(3.08e-12)]_3_[+9(1.23e-12)]_\ 21_[-2(3.09e-18)]_1 chr10:90826679-90826779 1.79e-30 34_[-9(4.00e-10)]_3_[+6(7.69e-14)]_\ 21 chr6:42019997-42020097 6.62e-53 [+1(5.31e-17)]_15_[-9(7.85e-11)]_5_\ [-8(7.69e-14)]_7 chr4:142294778-142294856 4.81e-35 1_[-7(1.30e-13)]_14_[+2(2.36e-13)]_\ 10 chr5:172020571-172020671 2.83e-45 7_[-2(7.82e-11)]_12_[+5(1.71e-19)]_\ 18 chr10:100336491-10033659 5.84e-40 4_[+1(7.56e-16)]_14_[-9(7.85e-11)]_\ 5_[-8(3.77e-12)]_4 chrY:10896439-10896509 1.23e-12 40_[+7(4.17e-12)]_8 chrX:15297011-15297111 3.31e-45 3_[+1(9.85e-13)]_13_[-9(3.53e-10)]_\ 10_[-4(6.14e-14)]_1 chr10:11599728-11599828 1.38e-20 24_[-3(4.46e-12)]_45 chr3:48400264-48400351 7.86e-24 13_[-2(2.83e-09)]_14_[+7(3.39e-10)]_\ 7 chr7:75570290-75570390 5.70e-61 2_[+8(8.04e-12)]_5_[+9(2.61e-12)]_\ 10_[-3(4.22e-19)]_10 chr1:91295928-91296028 1.91e-34 2_[+4(6.53e-07)]_[+9(4.82e-12)]_21_\ [-2(4.69e-17)]_4 chr5:120824418-120824514 4.90e-44 20_[-5(9.03e-20)]_12_[+2(4.76e-13)]_\ 1 chr1:3936637-3936690 7.64e-18 19_[+7(6.14e-14)]_12 chr10:16761575-16761675 2.28e-42 5_[+1(5.90e-16)]_14_[-9(1.23e-12)]_\ 3_[+6(3.08e-12)]_5 chr14:21006081-21006153 7.00e-22 15_[+10(1.41e-14)]_30 chr9:72438058-72438122 2.97e-13 18_[-10(2.02e-13)]_19 chr1:45749487-45749587 1.24e-31 13_[+4(6.14e-14)]_10_[+9(2.61e-12)]_\ 35 chr7:157631551-157631651 3.89e-48 3_[+1(2.71e-16)]_14_[-9(4.82e-12)]_\ 10_[-4(4.11e-12)] chr11:28117994-28118094 1.95e-34 [-2(1.25e-12)]_12_[+5(7.10e-17)]_25 chr9:74318654-74318754 1.02e-31 36_[+5(3.32e-19)]_32 chr9:64347049-64347149 3.29e-32 2_[+3(4.22e-19)]_20_[-8(2.83e-13)]_\ 25 chr13:67697717-67697817 9.31e-64 1_[+2(1.11e-19)]_21_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_2 chr7:57496724-57496780 3.63e-23 [-5(1.27e-17)]_24 chr11:19759090-19759190 1.82e-49 [-6(3.08e-12)]_3_[+9(6.58e-08)]_21_\ [-2(1.11e-19)]_3 chrY:10662493-10662561 1.70e-22 36_[+5(1.27e-17)] chr6:53576777-53576789 1.00e+00 12 chr14:52148597-52148686 3.86e-17 35_[+5(9.82e-15)]_22 chr12:112378761-11237886 2.30e-50 1_[+2(1.11e-19)]_19_[-9(1.26e-10)]_\ 3_[+6(7.69e-14)]_4 chr5:69921644-69921744 1.04e-41 3_[+3(4.28e-13)]_12_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_9 chrY:10780542-10780606 1.96e-10 35_[+7(2.38e-12)]_7 chr2:7188707-7188807 1.37e-26 33_[-5(2.65e-17)]_35 chr8:96234708-96234798 2.40e-33 5_[-5(9.22e-15)]_12_[+2(8.58e-08)]_\ 10 chr2:84248202-84248302 3.57e-38 5_[-3(1.75e-08)]_18_[+5(3.44e-17)]_\ 14 chr9:81310960-81311060 6.01e-31 6_[-6(7.69e-14)]_3_[+9(1.26e-10)]_\ 17_[-1(3.69e-09)]_1 chr2:181418864-181418964 7.95e-54 1_[+4(6.14e-14)]_10_[+9(4.86e-10)]_\ 10_[-3(1.11e-15)]_6 chr12:60556010-60556110 2.35e-30 19_[+9(4.82e-12)]_30_[-1(4.72e-17)] chr2:203032376-203032476 2.69e-27 28_[+2(4.35e-19)]_41 chr12:14299164-14299264 1.73e-36 10_[+8(3.69e-13)]_5_[+9(1.23e-12)]_\ 12_[-3(1.05e-12)] chr7:76108474-76108547 3.73e-27 28_[+10(2.15e-15)]_18 chr7:75871197-75871297 5.55e-31 3_[+3(9.70e-16)]_15_[-9(8.49e-09)]_\ 5_[-8(7.69e-14)]_4 chrX:1048875-1048958 1.85e-15 6_[-7(7.94e-09)]_13_[+2(6.90e-07)]_\ 11 chr2:112354003-112354078 7.10e-31 5_[-7(1.30e-13)]_14_[+2(5.30e-15)]_\ 3 chrX:105907171-105907260 5.67e-32 13_[-5(7.74e-19)]_12_[+2(1.48e-07)]_\ 1 chrY:10892624-10892692 1.10e-17 36_[+5(3.82e-14)] chr1:14465118-14465218 4.49e-60 [+2(2.11e-19)]_20_[-9(2.61e-12)]_3_\ [+6(7.69e-14)]_4 chr7:669867-669967 5.43e-44 1_[-6(3.08e-12)]_3_[+9(1.26e-10)]_\ 23_[-2(1.32e-16)] chr5:69132514-69132614 2.82e-30 7_[-9(1.20e-11)]_3_[+6(7.69e-14)]_\ 10_[+6(2.96e-05)]_16 chr1:246916566-246916656 4.24e-28 29_[-5(6.57e-18)]_29 chr11:47897984-47898061 1.39e-26 16_[+10(2.15e-15)]_34 chr2:20127386-20127486 4.00e-60 [+4(6.14e-14)]_10_[+9(1.23e-12)]_14_\ [-1(4.35e-19)]_3 chr14:89611524-89611624 1.05e-48 4_[+1(1.11e-19)]_14_[-9(7.29e-12)]_\ 3_[+6(5.07e-12)]_6 chr3:149568761-149568861 1.58e-59 [+4(6.14e-14)]_10_[+9(2.61e-12)]_14_\ [-1(4.35e-19)]_3 chr11:67822371-67822441 1.85e-16 25_[+10(5.03e-16)]_18 chr1:8731826-8731926 7.91e-43 16_[+9(3.53e-10)]_21_[-2(1.11e-19)]_\ 12 chr6:41411261-41411357 2.48e-40 13_[-2(6.76e-11)]_12_[+5(1.24e-16)]_\ 8 chr6:137419295-137419395 2.02e-41 15_[+2(1.11e-19)]_21_[-9(4.00e-10)]_\ 13 chr7:105400351-105400440 4.00e-27 2_[-2(9.10e-06)]_8_[+5(4.54e-17)]_\ 16 chr9:15569533-15569633 2.23e-60 2_[+1(4.35e-19)]_14_[-9(2.61e-12)]_\ 10_[-4(6.14e-14)]_1 chr8:100968192-100968292 1.39e-52 10_[-6(3.08e-12)]_3_[+9(7.29e-12)]_\ 14_[-1(7.46e-18)] chr3:184153049-184153149 7.32e-24 4_[+2(1.37e-15)]_11_[-9(1.53e-10)]_\ 34 chr14:80617219-80617319 9.83e-41 [+4(6.14e-14)]_10_[+9(1.26e-10)]_15_\ [-3(3.14e-13)]_2 chr13:49257488-49257588 7.37e-38 14_[+2(1.08e-18)]_55 chr1:159838189-159838271 4.14e-37 3_[-5(1.33e-14)]_12_[+2(2.44e-14)]_\ 4 chr9:35652878-35652967 2.28e-21 13_[-2(8.57e-09)]_12_[+5(4.34e-10)]_\ 1 chr11:49641623-49641723 3.95e-31 1_[+3(1.62e-09)]_9_[-9(4.00e-10)]_5_\ [-8(1.12e-12)]_12 chr15:26026020-26026120 3.99e-20 19_[+9(4.00e-10)]_23_[-2(1.15e-13)]_\ 7 chr12:98768452-98768552 1.34e-60 10_[+3(4.22e-19)]_10_[-9(7.29e-12)]_\ 5_[-8(7.69e-14)]_2 chr12:110188050-11018815 8.33e-46 3_[+1(2.94e-14)]_14_[-9(1.70e-07)]_\ 3_[+6(7.69e-14)]_7 chr9:30639856-30639956 4.27e-31 2_[+2(1.14e-12)]_21_[-9(1.32e-09)]_\ 3_[+6(7.69e-14)]_1 chr2:121302741-121302841 3.80e-48 4_[+1(6.33e-17)]_14_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)]_6 chr14:43074975-43075055 2.32e-28 5_[-7(1.37e-11)]_14_[+2(1.97e-10)]_\ 8 chrX:111310050-111310150 8.18e-42 18_[+3(2.22e-18)]_10_[-9(7.29e-12)]_\ 21 chrY:11006515-11006583 4.36e-26 36_[+5(5.58e-19)] chr14:53108508-53108580 6.05e-17 13_[+10(8.19e-16)]_32 chr6:96155462-96155562 3.15e-24 10_[-9(3.53e-10)]_3_[+6(3.08e-12)]_\ 45 chr8:25402294-25402394 7.77e-45 3_[+8(1.46e-13)]_5_[+9(2.29e-10)]_\ 14_[-1(2.31e-17)]_5 chr9:119959087-119959187 2.01e-44 3_[+1(8.68e-17)]_19_[-9(1.23e-12)]_\ 3_[+6(3.08e-12)]_2 chr3:126877273-126877373 1.18e-51 3_[+2(2.11e-19)]_20_[-9(5.45e-11)]_\ 3_[+6(5.94e-11)]_1 chr12:118254757-11825485 5.32e-48 2_[-6(7.69e-14)]_3_[+9(7.29e-12)]_\ 19_[-1(4.72e-17)]_3 chr2:25368304-25368378 1.12e-23 [-2(1.18e-11)]_14_[+7(1.68e-10)]_7 chr2:63402652-63402743 2.84e-32 34_[+5(4.13e-19)]_25 chrY:10663125-10663193 7.81e-18 36_[+5(2.73e-14)] chr9:120520263-120520309 5.46e-03 17_[-9(9.10e-06)]_9 chr6:36299323-36299423 3.69e-55 2_[+4(2.12e-12)]_10_[+9(1.23e-12)]_\ 14_[-1(4.35e-19)]_1 chrY:10808851-10808900 9.72e-21 17_[+5(1.49e-16)] chr10:10269054-10269154 1.24e-18 19_[-10(1.21e-11)]_4_[+7(4.17e-12)]_\ 28 chr7:65893608-65893675 6.39e-16 13_[+10(1.35e-13)]_27 chr2:237799455-237799555 7.90e-06 63_[-6(3.70e-07)]_15 chr7:85732351-85732435 5.67e-35 4_[-7(6.14e-14)]_14_[+2(4.28e-13)]_\ 13 chr10:2538305-2538405 1.94e-34 5_[+3(9.68e-10)]_15_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_4 chr3:151984442-151984542 4.98e-39 4_[+1(3.80e-13)]_15_[-9(5.45e-11)]_\ 3_[+6(7.69e-14)]_5 chr1:230757884-230757948 1.42e-15 30_[-5(4.54e-17)]_2 chr2:6969760-6969860 1.15e-51 5_[-6(7.69e-14)]_3_[+9(1.26e-10)]_\ 19_[-2(1.11e-19)] chr7:6340930-6341030 6.95e-24 21_[-9(1.11e-07)]_3_[+6(5.07e-12)]_\ 34 chr2:218819597-218819697 5.51e-51 2_[-6(7.69e-14)]_3_[+9(1.32e-09)]_\ 14_[-1(1.94e-15)]_8 chrY:10986287-10986349 4.95e-09 34_[+7(5.33e-11)]_6 chr5:14395785-14395885 1.18e-30 39_[-9(2.61e-12)]_5_[-8(7.69e-14)]_\ 14 chr13:36930988-36931088 5.85e-31 3_[-6(7.69e-14)]_3_[+9(5.45e-11)]_\ 18_[-1(1.93e-10)]_3 chr2:133172640-133172740 9.19e-42 14_[+9(1.20e-11)]_14_[-1(1.11e-19)]_\ 21 chr8:30892752-30892852 6.77e-58 6_[+1(4.35e-19)]_14_[-9(1.23e-12)]_\ 5_[-8(1.82e-11)]_2 chr7:91205785-91205885 1.28e-42 7_[+8(7.69e-14)]_5_[+9(3.53e-10)]_\ 13_[-1(9.36e-11)]_2 chr11:67340614-67340714 3.94e-51 2_[-6(7.69e-14)]_3_[+9(3.53e-10)]_\ 22_[-2(3.44e-16)] chr1:191571244-191571344 6.77e-31 22_[-9(3.53e-10)]_10_[-4(6.14e-14)]_\ 26 chr10:10997254-10997325 1.73e-12 15_[+10(8.95e-12)]_29 chr12:69300367-69300467 4.03e-34 2_[+2(6.02e-15)]_21_[-9(2.72e-10)]_\ 3_[+6(7.69e-14)]_1 chr5:69283220-69283320 1.12e-42 1_[+8(4.92e-13)]_5_[+9(2.72e-10)]_\ 21_[-2(1.50e-15)] chr8:47854360-47854460 1.08e-24 17_[+9(1.26e-10)]_22_[-2(1.84e-14)]_\ 10 chr1:36246560-36246660 2.80e-43 20_[+3(4.22e-19)]_10_[-9(3.53e-10)]_\ 19 chr7:63432587-63432663 9.63e-20 3_[-7(1.37e-11)]_14_[+2(6.12e-07)]_\ 6 chr1:163012678-163012778 3.36e-68 4_[-6(7.69e-14)]_3_[+9(2.61e-12)]_\ 14_[-1(1.11e-19)]_6 chr6:139491925-139492025 1.33e-58 7_[+1(6.94e-18)]_14_[-9(8.49e-09)]_\ 3_[+6(7.69e-14)]_3 chr4:120896692-120896792 1.74e-47 24_[+9(4.82e-12)]_14_[-1(1.11e-19)]_\ 11 chr9:89113431-89113510 4.55e-33 [-5(5.06e-13)]_12_[+2(1.67e-10)]_4 chr4:10620820-10620920 8.81e-27 5_[+1(4.72e-17)]_22_[-9(7.29e-12)]_\ 22 chr8:141665190-141665263 2.58e-26 [-2(8.00e-06)]_10_[+5(2.30e-14)] chr2:61168871-61168971 5.17e-33 23_[+9(1.23e-12)]_19_[-2(1.08e-18)]_\ 7 chr12:116285473-11628554 1.17e-14 1_[-7(4.04e-09)]_14_[+2(1.92e-09)]_\ 5 chr8:102944936-102945036 3.09e-42 [-6(7.69e-14)]_3_[+9(3.53e-10)]_23_\ [-2(1.11e-19)]_1 chrY:10978637-10978705 6.95e-17 15_[-10(4.34e-12)]_26 chrX:71771439-71771539 4.93e-36 6_[+4(6.14e-14)]_10_[+9(2.61e-12)]_\ 11_[-3(4.32e-07)] chr5:132537846-132537946 2.35e-42 7_[+2(2.11e-19)]_21_[-9(7.29e-12)]_\ 21 chr4:2970673-2970773 1.07e-46 1_[-6(3.08e-12)]_3_[+9(3.53e-10)]_\ 21_[-2(1.28e-17)]_2 chr5:74809312-74809412 2.64e-24 4_[+2(2.63e-14)]_22_[-9(6.58e-08)]_\ 23 chrY:10683318-10683387 1.55e-23 37_[+5(7.10e-17)] chr8:100007805-100007862 5.06e-14 12_[+10(1.67e-16)]_18 chr6:105146445-105146545 2.73e-26 28_[-9(7.29e-12)]_3_[+6(3.08e-12)]_\ 27 chr5:143726082-143726182 1.09e-17 4_[+1(3.03e-13)]_24_[-9(2.15e-09)]_\ 21 chrX:99438027-99438127 2.92e-19 11_[+1(1.13e-11)]_14_[-9(4.86e-10)]_\ 24 chr12:128847276-12884737 4.02e-41 4_[+1(3.90e-16)]_14_[-9(3.53e-10)]_\ 5_[-8(1.46e-13)]_4 chr2:215217933-215218033 2.46e-57 17_[-6(7.69e-14)]_15_[-2(2.11e-19)]_\ 15 chr4:138785700-138785762 3.05e-20 1_[-5(2.12e-18)]_29 chr12:22834190-22834290 5.62e-21 [+3(3.32e-15)]_28_[-9(2.61e-12)]_21 chr10:15903815-15903915 1.24e-27 5_[-2(2.44e-07)]_10_[+5(2.46e-15)]_\ 22 chrY:10797111-10797159 5.88e-07 19_[+7(2.35e-11)]_7 chrY:10995875-10995948 2.30e-18 41_[+5(2.73e-14)] chrY:1855179-1855279 4.82e-25 40_[-9(1.23e-12)]_5_[-8(2.83e-13)]_\ 13 chr5:59702129-59702229 5.09e-28 24_[+9(7.29e-12)]_21_[-2(2.74e-17)]_\ 4 chr3:106557866-106557966 1.62e-57 2_[+4(6.14e-14)]_10_[+9(5.45e-11)]_\ 10_[-3(1.16e-17)]_5 chr11:19691555-19691655 2.11e-30 42_[+5(3.44e-17)]_26 chr3:129734904-129735004 3.93e-47 [+8(1.82e-11)]_5_[+9(2.61e-12)]_20_\ [-2(2.53e-14)]_2 chr9:116743268-116743368 1.78e-32 20_[+2(2.73e-16)]_21_[-9(3.63e-08)]_\ 8 chr11:110139864-11013993 2.71e-19 27_[-10(9.47e-13)]_16 chr6:2239689-2239789 2.48e-42 20_[+9(7.29e-12)]_21_[-2(8.47e-19)]_\ 8 chr1:179277742-179277842 4.56e-46 1_[+1(1.19e-10)]_15_[-9(1.23e-12)]_\ 3_[+6(7.69e-14)]_8 chr9:42485489-42485555 7.43e-09 [-2(3.99e-08)]_13_[+7(3.86e-10)] chr7:111648390-111648490 3.07e-33 5_[+1(5.22e-10)]_16_[-9(7.29e-12)]_\ 5_[-8(7.69e-14)]_1 chr9:92039433-92039497 1.95e-11 10_[-10(2.88e-10)]_[+7(6.40e-12)]_5 chr1:169993601-169993687 4.08e-04 19_[-4(1.35e-06)]_45 chr6:43595957-43596030 9.43e-27 1_[-5(3.09e-17)]_40 chr10:73784364-73784464 2.76e-42 1_[-6(7.69e-14)]_3_[+9(1.23e-12)]_\ 20_[-2(2.07e-14)]_3 chr14:49696934-49697034 1.26e-32 4_[+8(4.92e-13)]_5_[+9(1.44e-08)]_\ 10_[-3(2.14e-11)]_8 chr3:125890389-125890458 3.54e-18 18_[-10(5.03e-16)]_24 chr5:152508577-152508677 4.28e-29 35_[+5(7.74e-19)]_33 chrY:10655793-10655861 1.19e-23 36_[+5(2.73e-14)] chr11:99306624-99306724 4.92e-41 3_[-4(6.14e-14)]_20_[-5(4.13e-19)]_\ 23 chr2:108793075-108793175 1.69e-25 7_[+2(1.25e-15)]_28_[-9(1.26e-10)]_\ 14 chr1:44148665-44148742 7.37e-36 1_[-2(4.27e-05)]_10_[+5(2.52e-19)]_\ 3 chr2:102311056-102311145 1.82e-38 1_[-5(2.84e-15)]_12_[+2(2.21e-10)]_\ 13 chr11:28843870-28843970 2.15e-24 32_[+5(1.15e-17)]_36 chr7:64177392-64177492 9.92e-50 7_[+8(1.46e-13)]_5_[+9(5.45e-11)]_\ 10_[-3(8.44e-16)]_5 chr10:26094416-26094516 3.14e-61 8_[-6(7.69e-14)]_3_[+9(7.29e-12)]_\ 14_[-1(1.11e-19)]_2 chr3:82780318-82780418 3.00e-24 23_[+9(1.23e-12)]_25_[-2(1.67e-12)]_\ 1 chr14:74745596-74745696 9.33e-27 34_[-9(1.20e-11)]_3_[+6(3.08e-12)]_\ 21 chrY:11292699-11292759 4.38e-11 34_[+7(2.38e-12)]_4 chr1:144656234-144656327 8.67e-37 1_[-2(7.99e-15)]_12_[+5(1.72e-15)]_\ 17 chr11:84445634-84445734 1.21e-52 4_[+1(1.11e-19)]_14_[-9(2.61e-12)]_\ 3_[+6(7.69e-14)]_6 chr2:28786574-28786674 1.53e-32 8_[-9(1.23e-12)]_3_[+6(7.69e-14)]_\ 47 chr14:80999919-80999999 2.32e-30 13_[-2(2.90e-09)]_14_[+7(2.46e-13)] chr6:1968979-1969079 1.42e-57 5_[+3(3.70e-17)]_11_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_8 chr7:69078355-69078452 1.06e-34 2_[-2(2.52e-08)]_12_[+5(7.67e-18)]_\ 20 chr14:103472386-10347248 1.53e-27 40_[-9(8.49e-09)]_10_[-4(6.14e-14)]_\ 8 chr12:94883425-94883489 1.58e-17 31_[+2(2.26e-13)]_2 chrY:10804687-10804746 8.60e-10 30_[+7(2.35e-11)]_7 chr12:49773616-49773716 1.17e-48 [+4(2.12e-12)]_10_[+9(1.23e-12)]_14_\ [-1(6.16e-16)]_3 chr10:68789476-68789537 1.61e-06 2_[-7(4.04e-09)]_37 chr3:49200996-49201096 7.91e-55 2_[-6(7.69e-14)]_3_[+9(2.72e-10)]_\ 20_[-2(2.57e-16)]_2 chr3:59490740-59490840 2.37e-36 [+4(2.12e-12)]_10_[+9(3.53e-10)]_15_\ [-1(3.69e-09)]_2 chr2:233484093-233484178 6.73e-32 6_[-5(5.67e-18)]_12_[+2(3.20e-09)]_\ 4 chr7:18991358-18991458 3.80e-53 3_[+1(6.47e-19)]_14_[-9(7.29e-12)]_\ 5_[-8(4.92e-13)]_5 chr1:219994640-219994740 5.29e-59 10_[-6(7.69e-14)]_3_[+9(4.82e-12)]_\ 14_[-1(2.11e-18)] chr1:69192955-69193017 2.98e-17 40_[+7(6.14e-14)] chrY:10958416-10958463 4.39e-13 15_[+5(6.46e-13)] chr3:96253865-96253965 3.45e-30 46_[-6(7.69e-14)]_3_[+9(4.02e-09)]_\ 9 chr2:47954125-47954225 5.87e-59 6_[+3(9.82e-18)]_11_[-9(2.61e-12)]_\ 10_[-4(6.14e-14)] chr7:34686911-34686985 3.00e-29 17_[+10(8.19e-16)]_30 chr3:138309675-138309746 9.71e-34 [-5(7.74e-19)]_8_[+2(2.56e-05)] chrY:10805575-10805643 3.11e-22 38_[+7(6.14e-14)]_8 chr3:87360798-87360852 1.00e-15 22_[+10(2.88e-14)]_5 chr2:68753904-68754004 6.78e-32 28_[+4(6.14e-14)]_10_[+9(2.61e-12)]_\ 20 chr7:87698087-87698187 2.23e-40 6_[+4(6.14e-14)]_10_[+9(4.82e-12)]_\ 11_[-3(2.48e-12)] chr12:7899804-7899870 1.01e-13 19_[+10(1.35e-13)]_20 chr5:63593474-63593557 2.21e-33 6_[-7(1.30e-13)]_14_[+2(1.22e-11)]_\ 10 chr1:26454258-26454323 4.25e-06 38_[+7(9.69e-10)]_5 chr2:19915850-19915940 1.93e-34 12_[-5(4.14e-17)]_12_[+2(8.63e-12)]_\ 3 chr4:619545-619645 7.01e-37 9_[-6(5.07e-12)]_3_[+9(1.01e-08)]_\ 15_[-1(8.57e-11)] chr7:115787132-115787232 8.90e-24 1_[-2(6.26e-12)]_14_[+7(1.28e-08)]_\ 2_[-10(8.29e-06)]_3 chr2:14872427-14872493 1.36e-15 28_[-6(3.08e-12)]_16 chr14:82192449-82192539 7.92e-41 6_[-2(1.49e-10)]_12_[+5(6.30e-19)]_\ 9 chr3:189709596-189709669 1.56e-21 16_[+10(2.15e-15)]_30 chr5:14500000-14500071 4.88e-34 [-7(2.46e-13)]_14_[+2(4.94e-13)]_4 chr14:71105553-71105653 4.93e-39 24_[+9(4.10e-06)]_19_[-2(3.09e-18)]_\ 6 chrY:10658027-10658089 3.93e-17 30_[+5(7.80e-17)] chr1:231246887-231246987 3.46e-36 16_[+3(1.18e-16)]_10_[-9(1.53e-10)]_\ 23 chr7:1128822-1128889 4.72e-20 17_[+5(2.12e-18)]_18 chr2:71193573-71193673 2.19e-20 10_[+2(3.69e-12)]_21_[-9(4.82e-12)]_\ 18 chr13:72102950-72103029 2.06e-21 5_[-7(6.14e-14)]_13_[+2(2.02e-09)]_\ 8 chr10:93884910-93885010 1.72e-35 2_[-6(3.08e-12)]_3_[+9(1.23e-12)]_\ 22_[-1(7.03e-12)] chr10:5850936-5851036 1.35e-17 2_[+8(2.11e-11)]_5_[+9(4.02e-09)]_\ 18_[-3(3.38e-06)]_2 chr9:67836790-67836890 5.69e-32 2_[+3(4.22e-19)]_20_[-8(2.83e-13)]_\ 25 chr2:61452623-61452723 1.85e-05 23_[+9(9.22e-05)]_13_[-8(4.34e-06)]_\ 22 chr12:3967131-3967231 2.67e-54 3_[+2(2.11e-19)]_19_[-9(3.10e-09)]_\ 3_[+6(5.07e-12)]_2 chr6:35513362-35513462 2.57e-43 2_[+1(9.85e-13)]_13_[-9(4.82e-12)]_\ 5_[-8(7.69e-14)]_7 chr1:23898335-23898435 6.36e-59 7_[-6(7.69e-14)]_3_[+9(2.61e-12)]_\ 14_[-1(4.35e-19)]_3 chr12:120128835-12012893 4.07e-50 6_[+4(6.14e-14)]_37_[-3(1.80e-17)]_\ 4 chr2:166316414-166316514 1.55e-40 1_[+2(3.66e-16)]_21_[-9(1.26e-10)]_\ 3_[+6(4.73e-07)]_2 chrY:11004486-11004539 1.33e-16 21_[+5(1.92e-14)] chr4:108195085-108195120 3.25e-01 35 chr2:217764430-217764495 1.12e-17 [-7(6.40e-12)]_12_[+2(2.21e-05)] chr3:33238627-33238727 9.09e-59 2_[+1(4.35e-19)]_14_[-9(1.23e-12)]_\ 3_[+6(7.69e-14)]_8 chr8:133686219-133686319 4.74e-29 39_[+4(6.14e-14)]_10_[+9(2.29e-10)]_\ 9 chr3:165716175-165716275 2.23e-41 12_[+5(7.74e-19)]_25_[+8(4.92e-13)]_\ 9 chr9:130358678-130358778 2.58e-42 6_[-6(7.69e-14)]_3_[+9(4.00e-10)]_\ 15_[-1(3.19e-15)]_3 chr3:195060343-195060387 6.82e-13 8_[-5(2.44e-12)]_4 chr9:104659686-104659786 1.65e-30 5_[-6(7.69e-14)]_3_[+9(1.26e-10)]_\ 11_[-3(1.57e-08)]_8 chr10:99986536-99986624 3.75e-48 [-5(2.51e-18)]_12_[+2(6.26e-12)]_13 chr1:225697925-225698025 1.07e-28 4_[+2(2.74e-17)]_21_[-9(7.29e-12)]_\ 24 chr7:36801114-36801214 1.73e-31 9_[+3(1.69e-10)]_11_[-9(7.29e-12)]_\ 3_[+6(5.07e-12)]_4 chrY:10791734-10791802 5.27e-15 36_[+5(4.56e-11)] chr14:63717311-63717411 1.19e-39 3_[+4(6.14e-14)]_10_[+9(4.82e-12)]_\ 11_[-3(2.86e-14)]_3 chr8:4668466-4668566 1.63e-39 6_[+4(6.14e-14)]_10_[+9(1.44e-08)]_\ 11_[-3(4.44e-17)] chr2:99847409-99847458 9.34e-02 5_[-9(9.84e-07)]_24 chr7:118511745-118511802 6.11e-09 17_[+10(2.36e-14)]_13 chr3:194142912-194143012 1.46e-38 2_[+1(4.36e-12)]_13_[-9(4.02e-09)]_\ 10_[-4(2.12e-12)]_2 chr6:56030632-56030732 5.08e-48 [+1(3.23e-16)]_16_[-9(7.29e-12)]_3_\ [+6(5.07e-12)]_8 chr3:153294488-153294588 4.10e-33 20_[+9(5.11e-08)]_20_[-2(1.11e-19)]_\ 9 chr1:44556565-44556665 2.10e-35 1_[-6(3.08e-12)]_3_[+9(1.23e-12)]_\ 20_[-2(3.30e-14)]_3 chr12:32046271-32046371 7.07e-32 20_[+9(4.00e-10)]_22_[-2(4.78e-18)]_\ 7 chr12:66593786-66593886 1.16e-57 3_[+1(1.11e-19)]_14_[-9(3.53e-10)]_\ 3_[+6(7.69e-14)]_7 chr8:15385900-15386000 5.02e-47 3_[+8(7.69e-14)]_5_[+9(1.23e-12)]_\ 11_[-3(4.44e-17)]_8 chr1:216237428-216237524 6.05e-47 8_[-5(3.32e-19)]_12_[+2(1.18e-10)]_\ 13 chr5:140756139-140756207 1.16e-20 26_[-10(1.41e-14)]_15 chr8:103424023-103424123 5.33e-23 22_[+9(4.82e-12)]_19_[-3(4.68e-14)]_\ 8 chr5:176977506-176977606 8.14e-28 16_[-7(3.39e-08)]_14_[+2(1.62e-10)]_\ 17 chr15:30846234-30846289 3.26e-16 7_[-7(6.14e-14)]_26 chr7:107686021-107686090 5.50e-18 1_[-2(2.10e-07)]_14_[+7(1.37e-11)]_\ 1 chrY:10998461-10998540 8.84e-16 41_[+5(3.19e-12)]_6 chrY:10691961-10692017 1.71e-15 24_[+5(1.23e-11)] chr10:16829812-16829912 3.07e-39 5_[-2(1.80e-08)]_12_[+5(4.13e-19)]_\ 20 chr7:90307667-90307738 7.29e-22 14_[+10(1.03e-12)]_30 chr15:30847030-30847085 3.82e-14 7_[-7(6.14e-14)]_26 chr9:137935782-137935853 7.44e-33 36_[+5(2.37e-18)]_3 chr6:157045469-157045555 4.52e-31 [-2(1.30e-05)]_10_[+5(2.37e-18)]_13 chr10:96965014-96965114 7.09e-53 3_[-6(3.08e-12)]_3_[+9(5.45e-11)]_\ 11_[-3(4.44e-17)]_10 chr8:42434059-42434126 1.10e-18 1_[-2(3.02e-05)]_12_[+7(6.14e-14)]_\ 1 chrX:29534686-29534786 2.08e-63 1_[+2(2.11e-19)]_21_[-9(2.61e-12)]_\ 3_[+6(7.69e-14)]_2 chrY:10778453-10778521 7.84e-17 36_[+5(2.55e-12)] chr4:134093588-134093634 2.89e-03 6_[-10(6.13e-08)]_13 chr4:92006631-92006731 2.14e-17 47_[+4(6.14e-14)]_31 chr2:216641999-216642099 1.37e-54 3_[+8(7.69e-14)]_44_[-2(1.08e-18)] chrY:10869780-10869844 8.89e-23 32_[+5(2.30e-14)] chr10:35249912-35250012 1.22e-47 5_[+1(1.11e-19)]_14_[-9(7.29e-12)]_\ 3_[+6(5.07e-12)]_5 chr2:32481484-32481584 5.48e-46 5_[+1(3.81e-18)]_14_[-9(7.29e-12)]_\ 3_[+6(7.69e-14)]_5 chr1:238243926-238244026 1.47e-54 6_[+3(2.02e-16)]_10_[-9(2.61e-12)]_\ 10_[-4(6.14e-14)]_1 chr1:36009929-36010029 2.34e-52 6_[+8(4.92e-13)]_5_[+9(1.26e-10)]_\ 11_[-3(1.80e-17)]_5 chr11:27071092-27071192 1.62e-13 5_[+1(1.19e-08)]_22_[-9(4.82e-12)]_\ 22 chr1:170577485-170577585 5.17e-43 5_[-6(3.08e-12)]_3_[+9(4.82e-12)]_\ 10_[-3(4.02e-16)]_9 chr3:32904539-32904639 1.69e-64 7_[+1(1.11e-19)]_11_[-9(1.26e-10)]_\ 5_[-8(7.69e-14)]_4 chr15:30846550-30846618 7.69e-14 7_[-7(6.14e-14)]_39 chr1:178873889-178873989 7.12e-19 27_[+5(7.98e-16)]_41 chr8:6309353-6309453 3.12e-22 23_[+9(3.53e-10)]_21_[-2(1.92e-16)]_\ 5 chr3:124541927-124541990 1.01e-13 4_[-7(3.77e-13)]_37 chr2:56120982-56121082 3.25e-49 5_[-6(3.08e-12)]_3_[+9(1.23e-12)]_\ 10_[-3(4.22e-19)]_9 chr5:40933924-40934016 1.25e-42 12_[-2(2.26e-12)]_12_[+5(7.02e-19)]_\ 5 chr8:138828663-138828763 5.81e-33 28_[-5(7.74e-19)]_40 chr1:28767485-28767585 5.17e-23 11_[+4(2.12e-12)]_10_[+9(5.55e-09)]_\ 37 chr4:77704903-77705003 1.01e-52 7_[+8(7.69e-14)]_5_[+9(7.29e-12)]_\ 14_[-1(3.59e-16)]_1 chr4:112684722-112684822 2.65e-62 2_[+1(1.11e-19)]_14_[-9(2.61e-12)]_\ 10_[-4(6.14e-14)]_1 chr7:1128271-1128331 4.18e-21 10_[+5(3.26e-18)]_18 chr10:120759828-12075992 3.26e-49 [+2(4.16e-16)]_22_[-9(8.27e-12)]_3_\ [+6(7.69e-14)]_2 chr7:90263807-90263907 2.22e-45 3_[+2(3.76e-16)]_21_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)] chr7:34689323-34689423 3.04e-49 1_[+1(2.16e-15)]_14_[-9(1.32e-09)]_\ 3_[+6(7.69e-14)]_9 chr3:60418711-60418763 4.49e-04 15_[+10(1.85e-09)]_10 chr14:46964919-46965019 2.06e-50 6_[-6(7.69e-14)]_3_[+9(2.61e-12)]_\ 14_[-1(4.35e-19)]_4 chr4:156426404-156426469 3.34e-13 16_[+10(2.46e-13)]_22 chr13:80383614-80383714 2.69e-17 5_[+1(2.96e-11)]_22_[-9(2.61e-12)]_\ 22 chrY:10648193-10648261 1.17e-19 36_[+5(1.92e-14)] chr1:165264921-165265021 6.40e-44 8_[+3(2.74e-17)]_11_[-9(6.95e-09)]_\ 5_[-8(7.69e-14)]_3 chr3:182034389-182034460 2.92e-15 22_[-10(8.19e-16)]_22 chr1:72320072-72320172 3.60e-24 60_[+10(3.54e-16)]_13 chr2:139276187-139276287 9.05e-39 7_[+2(1.11e-19)]_22_[-9(7.29e-12)]_\ 20 chr8:42434400-42434484 2.26e-26 35_[+5(8.52e-16)]_17 chr4:26598393-26598493 1.02e-61 2_[+8(3.77e-12)]_5_[+9(2.61e-12)]_\ 14_[-1(1.11e-19)]_6 chr9:92371995-92372060 1.65e-22 15_[+10(2.00e-15)]_23 chr2:39802662-39802729 2.47e-27 9_[-10(8.19e-16)]_31 chrY:10872029-10872078 1.06e-11 17_[+5(7.79e-12)] chr3:141922685-141922785 7.64e-44 1_[+2(1.08e-17)]_21_[-9(7.29e-12)]_\ 5_[-8(1.74e-10)] chr6:40289924-40289980 3.76e-01 17_[-9(6.96e-05)]_19 chr12:97905797-97905897 1.02e-05 26_[-5(6.38e-06)]_2_[-6(3.79e-06)]_\ 18 chr11:44501863-44501940 2.35e-21 7_[-7(1.28e-08)]_14_[+2(7.82e-11)]_\ 3 chrY:10651604-10651672 5.61e-30 36_[+5(5.58e-19)] chr4:9766246-9766346 2.65e-44 11_[+2(1.69e-14)]_9_[+6(7.69e-14)]_\ 27 chrY:10656112-10656168 1.03e-17 24_[+5(1.74e-10)] chr12:31666638-31666738 3.67e-38 5_[+8(1.46e-13)]_5_[+9(2.29e-10)]_\ 17_[-3(8.20e-13)] chr12:101250085-10125018 3.54e-21 4_[-6(7.69e-14)]_36_[-2(4.01e-06)]_\ 7 chr13:47108288-47108388 1.17e-19 19_[+9(8.49e-09)]_22_[-2(3.01e-15)]_\ 8 chr12:123376102-12337620 2.14e-04 25_[-5(3.59e-05)]_2_[-6(3.79e-06)]_\ 19 chr6:42549860-42549960 6.00e-33 [+1(2.59e-10)]_18_[-9(1.23e-12)]_3_\ [+6(7.69e-14)]_6 chrY:10667713-10667781 4.56e-25 36_[+5(4.14e-18)] chr5:146845305-146845405 9.08e-25 43_[-2(2.73e-16)]_26 chr7:141404024-141404124 1.11e-50 1_[+1(1.90e-17)]_14_[-9(4.82e-12)]_\ 10_[-4(6.14e-14)]_2 chr3:48765664-48765752 1.71e-41 1_[-5(4.14e-18)]_12_[+2(6.76e-09)]_\ 12 chr5:143363487-143363587 2.11e-41 25_[-5(3.32e-19)]_12_[+2(6.56e-11)] chr2:212099204-212099270 7.33e-10 14_[+10(3.68e-11)]_25 chr1:173198527-173198627 5.79e-33 28_[-5(9.03e-20)]_40 chrX:81091845-81091945 8.48e-31 21_[-9(1.23e-12)]_10_[-4(6.14e-14)]_\ 27 chr9:122735475-122735575 4.17e-31 32_[+5(4.13e-19)]_36 chr7:57493745-57493809 6.30e-28 [-5(5.58e-19)]_32 chr6:52340928-52340999 6.05e-21 28_[-10(9.48e-15)]_16 chr11:80215519-80215619 1.84e-54 6_[+3(4.22e-19)]_10_[-9(2.61e-12)]_\ 5_[-8(7.84e-13)]_6 chr8:56284818-56284896 6.48e-15 14_[+10(8.27e-12)]_37 chr11:113929725-11392982 1.47e-33 5_[-6(5.07e-12)]_3_[+9(1.23e-12)]_\ 14_[-1(1.81e-11)]_5 chr1:2007567-2007658 6.26e-24 12_[-7(3.42e-06)]_14_[+2(2.83e-11)]_\ 12 chr10:103436015-10343610 1.11e-33 13_[-2(1.68e-11)]_14_[+7(6.14e-14)]_\ 6 chr10:112185664-11218576 9.92e-27 32_[-5(9.01e-18)]_36 chr6:80626160-80626260 9.44e-47 12_[+3(9.05e-16)]_11_[-9(8.49e-09)]_\ 2_[+6(3.08e-12)]_2 chr2:72380357-72380457 7.43e-39 19_[+3(8.28e-17)]_11_[-9(1.23e-12)]_\ 19 chr3:171499931-171499999 1.97e-26 1_[-2(4.52e-12)]_14_[+7(2.46e-13)] chr10:55678731-55678831 3.11e-56 1_[+8(2.91e-10)]_5_[+9(3.53e-10)]_\ 14_[-1(6.47e-19)]_7 chr8:102956659-102956759 1.95e-33 1_[-2(1.90e-05)]_10_[+5(1.15e-16)]_\ 26 chr10:18074242-18074342 1.73e-47 4_[+1(1.11e-19)]_14_[-9(5.45e-11)]_\ 3_[+6(5.07e-12)]_6 chr1:236043516-236043616 2.51e-54 1_[+1(1.11e-19)]_14_[-9(2.61e-12)]_\ 10_[-4(2.12e-12)]_2 chr5:81151385-81151453 3.04e-25 [-2(3.37e-13)]_14_[+7(5.13e-09)]_1 chr10:20861201-20861301 2.27e-34 16_[+9(3.53e-10)]_20_[-2(3.66e-16)]_\ 13 chr3:121554503-121554575 1.45e-19 5_[-7(1.30e-13)]_14_[+2(1.58e-07)] chr1:70439663-70439763 8.41e-43 8_[+1(4.56e-16)]_16_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)] chr10:125863450-12586355 3.62e-45 1_[-6(3.08e-12)]_3_[+9(3.53e-10)]_\ 22_[-2(1.11e-19)]_1 chr3:95361036-95361117 9.89e-42 4_[-5(1.71e-19)]_10_[+2(1.29e-09)]_\ 4 chr3:121561346-121561446 7.58e-48 12_[+3(2.88e-16)]_7_[-9(4.10e-06)]_\ 3_[+6(5.94e-11)]_5 chr6:25500765-25500865 3.18e-38 24_[+9(2.61e-12)]_23_[-2(1.11e-19)]_\ 2 chr7:142598683-142598783 7.66e-28 2_[+3(5.56e-08)]_11_[-9(1.23e-12)]_\ 10_[+6(7.69e-14)]_4 chr7:93919933-93920033 2.84e-18 9_[-8(2.11e-11)]_25_[-5(7.17e-07)]_\ 12 chr3:96409157-96409228 3.21e-28 37_[+5(1.67e-17)]_2 chr9:94764861-94764961 1.35e-30 12_[-2(1.81e-10)]_12_[+5(4.71e-12)]_\ 13 chr4:136153089-136153154 5.41e-12 24_[-10(3.74e-13)]_14 chr10:10494994-10495094 1.11e-23 4_[+2(1.14e-12)]_25_[-9(1.23e-12)]_\ 20 chr8:20827012-20827112 3.73e-40 3_[+8(3.77e-12)]_5_[+9(2.61e-12)]_\ 16_[-1(3.23e-16)]_3 chr12:86443581-86443681 6.23e-41 7_[+8(5.69e-13)]_5_[+9(1.23e-12)]_\ 15_[-1(1.30e-10)] chr10:103183508-10318360 8.15e-24 [-2(1.37e-05)]_14_[+5(2.29e-17)]_23 chr9:29621060-29621160 3.60e-60 10_[+3(1.99e-19)]_10_[-9(8.49e-09)]_\ 5_[-8(7.69e-14)]_2 chr2:159242051-159242151 2.13e-23 [-6(7.69e-14)]_3_[+9(3.53e-10)]_21_\ [-1(1.23e-10)]_3 chr2:227421572-227421619 1.86e-05 13_[+10(7.28e-11)]_7 chr1:35813127-35813227 1.64e-64 11_[+3(4.22e-19)]_10_[-9(1.26e-10)]_\ 3_[+6(7.69e-14)]_3 chr1:105614447-105614547 8.16e-28 14_[-6(3.08e-12)]_3_[+9(1.53e-10)]_\ 9_[-3(1.24e-07)]_1 chr2:78822074-78822174 3.53e-32 33_[+5(7.74e-19)]_35 chr10:24159497-24159597 8.20e-15 2_[+2(2.84e-12)]_24_[-9(3.10e-09)]_\ 23 chr5:61968010-61968110 2.48e-43 3_[+8(3.77e-12)]_5_[+9(4.00e-10)]_\ 14_[-1(4.35e-19)]_5 chr3:129799528-129799628 6.66e-33 6_[+2(2.09e-16)]_22_[-9(4.00e-10)]_\ 21 chr9:40200832-40200932 3.29e-32 2_[+3(4.22e-19)]_20_[-8(2.83e-13)]_\ 25 chr2:26823213-26823313 4.18e-41 12_[+1(4.35e-19)]_14_[-9(2.29e-10)]_\ 23 chrY:56834649-56834717 1.44e-26 36_[+5(2.12e-18)] chr12:110459231-11045933 6.80e-56 8_[-6(3.08e-12)]_3_[+9(2.61e-12)]_\ 14_[-1(6.47e-19)]_2 chr10:61496108-61496167 1.09e-09 17_[-10(1.50e-13)]_15 chr1:247033252-247033352 4.89e-22 5_[+1(2.74e-12)]_18_[-9(1.23e-12)]_\ 3_[+6(3.79e-06)]_1 chr5:53876123-53876223 1.26e-32 2_[+2(2.18e-12)]_21_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)]_1 chr15:30847484-30847539 5.19e-14 7_[-7(2.38e-12)]_26 chr2:48204090-48204160 1.85e-17 1_[-2(1.28e-06)]_12_[+7(2.38e-12)]_\ 4 chrX:677003-677103 3.03e-36 5_[+1(5.42e-15)]_15_[-9(1.53e-10)]_\ 3_[+6(1.37e-10)]_4 chr1:199381036-199381108 1.46e-33 3_[-2(9.55e-05)]_6_[+5(9.03e-20)] chr10:55978206-55978280 2.04e-25 32_[-10(2.88e-14)]_15 chr3:33997368-33997468 4.95e-56 2_[+1(4.22e-16)]_14_[-9(7.29e-12)]_\ 10_[-4(6.14e-14)]_1 chr8:80286977-80287058 5.69e-25 9_[-2(1.18e-10)]_14_[+7(6.40e-12)]_\ 5 chr14:82205874-82205974 3.46e-67 2_[-6(7.69e-14)]_3_[+9(1.26e-10)]_\ 14_[-1(1.11e-19)]_8 chr6:6939368-6939468 1.10e-15 5_[+2(1.90e-11)]_23_[-9(1.26e-10)]_\ 21 chr1:160234190-160234257 6.00e-19 2_[-7(1.37e-11)]_12_[+2(4.08e-06)] chr9:89308502-89308578 1.40e-38 [-2(6.48e-12)]_12_[+5(3.44e-17)]_1 chr9:568468-568517 1.23e-06 5_[-10(1.39e-10)]_17 chr1:180296845-180296945 9.10e-03 57_[+10(9.87e-06)]_16 chr7:87049272-87049372 6.85e-28 10_[+4(6.14e-14)]_10_[+9(6.58e-08)]_\ 38 chr3:109450844-109450944 5.98e-65 1_[+2(4.35e-19)]_20_[-9(4.82e-12)]_\ 3_[+6(7.69e-14)]_3 chr9:135428352-135428452 1.11e-59 [+1(1.11e-19)]_14_[-9(4.00e-10)]_3_\ [+6(7.69e-14)]_10 chr7:66384415-66384515 1.38e-29 16_[-6(7.69e-14)]_3_[+9(7.29e-12)]_\ 39 chr6:16914951-16915051 3.31e-37 5_[+8(7.69e-14)]_5_[+9(5.45e-11)]_\ 13_[-1(2.50e-08)]_4 chr6:42329708-42329808 9.62e-62 3_[+2(1.08e-18)]_19_[-9(5.45e-11)]_\ 5_[-8(7.69e-14)] chr4:122970474-122970539 3.10e-18 [-2(2.21e-05)]_12_[+7(1.30e-13)] chr7:69390876-69390962 1.21e-19 3_[-2(1.97e-09)]_14_[+7(3.34e-07)]_\ 16 chr3:133502305-133502405 2.72e-54 1_[+1(7.56e-16)]_14_[-9(1.23e-12)]_\ 10_[-4(6.14e-14)]_2 chr6:43822021-43822121 9.14e-59 3_[+1(4.35e-19)]_14_[-9(3.53e-10)]_\ 10_[-4(6.14e-14)] chr11:46836804-46836860 9.02e-02 56 chrY:677003-677103 3.03e-36 5_[+1(5.42e-15)]_15_[-9(1.53e-10)]_\ 3_[+6(1.37e-10)]_4 chr5:120085858-120085949 1.95e-32 40_[+5(4.13e-19)]_19 chr11:61213110-61213179 1.40e-15 24_[+10(4.14e-13)]_18 chr5:43507796-43507896 5.48e-55 [+2(2.73e-16)]_20_[-9(2.72e-10)]_3_\ [+6(7.69e-14)]_4 chr10:122031397-12203149 2.03e-45 8_[-6(7.69e-14)]_3_[+9(5.45e-11)]_\ 13_[-1(3.52e-13)]_3 chr2:232088118-232088218 3.46e-06 17_[+6(4.96e-07)]_2_[+5(4.78e-05)]_\ 27 chr9:105496202-105496299 1.70e-32 2_[-2(2.89e-10)]_14_[+7(6.14e-14)]_\ 28 chr2:239334740-239334840 2.22e-27 5_[+1(3.52e-08)]_16_[-9(3.53e-10)]_\ 3_[+6(3.08e-12)]_3 chr12:1677999-1678058 1.87e-08 15_[+10(1.03e-13)]_17 chr7:84538597-84538696 3.52e-37 18_[-5(5.67e-18)]_12_[+2(7.79e-09)]_\ 6 chr12:8257003-8257076 7.61e-21 7_[-7(5.33e-11)]_12_[+2(3.80e-06)]_\ 1 chr8:22940484-22940584 1.51e-40 5_[-6(3.08e-12)]_3_[+9(3.53e-10)]_\ 11_[-3(9.05e-16)]_8 chr5:70072840-70072940 2.30e-30 3_[+1(6.05e-13)]_17_[-9(1.01e-08)]_\ 3_[+6(5.07e-12)]_4 chr5:2460947-2461047 2.94e-60 [+2(1.08e-18)]_20_[-9(4.82e-12)]_5_\ [-8(4.92e-13)]_2 chr5:54297787-54297887 6.53e-42 2_[+4(4.11e-12)]_10_[+9(3.53e-10)]_\ 13_[-1(1.49e-13)]_2 chrY:10951442-10951505 7.22e-20 31_[+5(3.69e-15)] -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: wotan ********************************************************************************