Each "motif probability curve" shows the (estimated) probability of the best match to a given motif occurring at a given position in the input sequences. This estimated probability is based only on sequences that contain at least one match with score greater than the minimum score defined for this motif, and is the maximum likelihood estimate of the conditional probability shown below.

Points (X,Y) on the plot are:
  Y = Pr(best match occurs at position X | sequence contains a match)

Note: The plots are smoothed according to the function selected from the "Smoothing" menu on the right. Setting the smoothing window size to 1 turns off smoothing.

If a negative dataset has been supplied then two lines are drawn for each motif representing both datasets. The normal dataset is plotted with a single unbroken line whereas the negative dataset is plotted with a dashed line.

[ close ]

This shows a listing of all motifs currently plotted on the graph.

The color used to plot a motif can be changed by clicking on the color swatch next to the motif you want to change, followed by clicking on the color swatch you wish to swap it with.

[ close ]

These are extra colors you may use for plotting motifs.

Click on the color swatch next to one of the above motifs, then click on one of these "unused color" swatches to change the color of the motif's plot.

[ close ]

These options change the display of the graph.

Smoothing:

Allows selection of the smoothing function applied to the graph.

The weighted moving average option uses weights shaped as an isosceles triangle where the central point (or points in an even sized window) get the maximum weight.

The moving average simply weights all points in the smoothing window equally.

Note: Setting the smoothing window size to 1 turns off smoothing.

Window

The window size used to smooth the graph. The larger the smoothing window size, the smoother the graph, at the cost of hiding detail.

Below a smoothing window size of 10, thinner lines are used on the graph to allow more detail to be visible.

Note: Remember to press "return" or "enter" after changing the number in the input box in order to see the effect of the new smoothing window size.

Legend

Choose to display/disable the on-graph legend. The legend can be moved by clicking on the graph.

Negative Sequences

Choose whether to plot the motif probability curve(s) for the negative sequences (if provided). The curve(s) are plotted as dashed lines, using the same color as the corresponding curve for the positive sequences.

Zoom
Drag a range on the graph to zoom into that section. Clicking "Undo Zoom" will return the view to the preiously displayed part of the graph and clicking "Center on 0" will move the view so 0 is in the center.
Download EPS

Download the graph that you are currently viewing as an encapsulated postscript (EPS) image. EPS images are scalable making them suitable for publication.

[ close ]

List only enriched motifs that meet the selected filter criteria below.

Selected motifs are always listed; deselect all motifs first by clicking on the "X" above the color swatches if you wish to filter all motifs.

To filter on "ID" or "Name", you can enter any Javascript regular expression pattern. See here for documentation on Javascript regular expression patterns.

[ close ]

Sorting is applied after filtering where possible (the exception being the "Top" filter) so the filters applied will affect the sort. You can choose the motif sorting feature using the "Motifs:" menu.

If CentriMo is searching for locally enriched regions (not just centrally enriched regions), then multiple regions may be found per motif, and the "Regions:" menu will also be displayed. In this case, CentriMo first sorts all regions using the feature shown in the "Regions:" menu, and then it sorts the highest-ranked region of each motif according to the feature shown in the "Motifs:" menu.

Unless you check the box next to the "Regions:" menu, it will automatically show the same feature as the "Motifs:" menu (or "E-value" if a motif-only feature is chosen in the "Motifs:" menu).

Note:The motif p-value shown in the plot legend will always be for the region with the lowest p-value, and therefore may not match the value shown in the table "p-value" column when the "Regions:" menu is not set to "p-value".

[ close ]

The name of the database (file name) that contains the motif.

[ close ]

An ID for the motif that is unique in the motif database file. If more than one motif has the same ID, CentriMo uses only the first such motif.

[ close ]

An alternate ID of the motif that may be provided in the motif database file.

[ close ]

A consensus sequence is constructed from each column in a motif's frequency matrix using the "50% rule" as follows.

  1. The letter frequencies in the column are sorted in decreasing order.
  2. Letters with frequency less 50% of the maximum are discarded.
  3. The letter used in this position in the consensus sequence is determined by the first rule below that applies:
[ close ]

The expected number motifs that would have least one region as comparatively enriched for best matches to the motif as the reported region in the positive sequences compared with the negative sequences.

The Fisher E-value is the (one-sided) p-value of the one-sided Fisher's exact test that at least as many best matches in the region in the positive sequences that contain at least one match, multiplied by the number of motifs in the input database(s). The Fisher's exact test p-value is corrected for the number of regions and score thresholds tested ("Multiple Tests").

Fisher's exact test assumes that the probability that the best match (if any) falls into a given region is the same for all positive and negative sequences.

[ close ]

The probability that any tested region would be as enriched for best matches to this motif as the reported region is.

By default the p-value is calculated by using the one-tailed binomial test on the number of sequences with a match to the motif ("Total Matches") that have their best match in the reported region ("Region Matches"), corrected for the number of regions and score thresholds tested ("Multiple Tests"). The test assumes that the probability that the best match in a sequence falls in the region is the region width divided by the number of places a motif can align in the sequence (sequence length minus motif width plus 1).

When CentriMo is run in discriminative mode with a negative set of sequences, the p-value of a region is calculated using Fisher's exact test on the enrichment of best matches in the positive sequences ("Region Matches") relative to the negative sequences ("Negative Region Matches"), corrected for the number of regions and score thresholds tested ("Multiple Tests"). The test assumes that the probability that the best match (if any) falls into a given region is the same for all positive and negative sequences.

[ close ]

The expected number motifs that would have least one region as enriched for best matches to the motif as the reported region. The E-value is the p-value multiplied by the number of motifs in the input database(s).

[ close ]

The Matthew's Correlation Coefficient (MCC) gives a measure of the ability of the motif to discriminate the positive sequences from the negative sequences:

MCC = [TP*TN - FP*FN] / [(TP + FP) * (TP + FN) * (TN + FP) * (TN + FN)]
where
TP is the number of positive sequences with a best match in the reported region,
FP is the number of negative sequences with a best match in the reported region,
TN is the number of negative sequences without a best match in the reported region, and
FN is the number of positive sequences without a best match in the reported region.

MCC ranges from -1 to +1, where a +1 result indicates that the occurrence of the best match to the motif in the reported region perfectly discriminates positive sequences from negative sequences.

[ close ]

This is the score threshold (in bits) for determining if a sequence contains a match to this motif.

When score optimization is enabled, this column lists the score threshold that gives the best p-value. Otherwise it shows the smallest score found that was above the minimum score threshold specified to CentriMo.

[ close ]

The width (in sequence positions) of the most enriched region. A best match to the motif is counted as being in the region if the center of the motif falls in the region.

[ close ]

The number of (positive) sequences whose best match to the motif falls in the reported region.

Note: This number may be less than the number of (positive) sequences that have a best match in the region. The reason for this is that a sequence may have many matches that score equally best. If n matches have the best score in a sequence, 1/n is added to the appropriate bin for each match.

[ close ]

The number of negative sequences where the best match to the motif falls in the reported region. This value is rounded but the underlying value may contain fractional counts.

Note: This number may be less than the number of negative have a best match in the region. The reason for this is that a sequence may have many matches that score equally best. If n matches have the best score in a sequence, 1/n is added to the appropriate bin for each match.

[ close ]

The number of sequences containing a match to the motif above the score threshold ("Score Threshold").

[ close ]

The number of negative sequences containing a match to the motif above the minimum score threshold. When score optimization is enabled the score threshold may be raised higher than the minimum.

[ close ]

The probability that any tested region in the negative sequences would be as enriched for best matches to this motif according to the Binomial test.

Use the filter to display only motifs differentially enriched in both datasets (low p-value and high negative p-value).

[ close ]

The maximum probability that the best match occurs at any single sequence position. If the smoothing window size ("Window:", to right of graph) is set to "1", then this is value is the maximum value of the match-probability curve.

[ close ]

This is the number of multiple tests (n) done for this motif. It was used to correct the original p-value of a region for multiple tests using the formula

p' = 1 - (1-p)^n

where p is the uncorrected p-value. The number of multiple tests is the number of regions considered times the number of score thresholds considered. It depends on the motif length, sequence length, and the type of optimizations being done (central enrichment, local enrichement, score optimization).

[ close ]

Location of the center of the most enriched region.

[ close ]

The text box lists the sequence identifiers for sequences which have at least one of their best matches in the most significant region of all the selected motifs.

The "Intersection" subheading gives the number of identifiers in the text box and their percentage out of the total number of input sequences.

The "Union" subheading lists the number and percentage of sequences that have at least one of their best matches in the most significant region of any of the selected motifs and their percentage out of the total number of input sequences.

Note that the number of sequences with a match to a given motif in its best region may be larger than the value of "Region Matches". This is because a sequence may have multiple equally best matches and in that case a fractional match count is assigned to each of them when "Region Matches" is computed.

[ close ]

When more than one significant, non-overlapping region is found, they can be shown (and hidden again) by clicking the arrow.

By default the regions are sorted by E-value, but this can be changed by the menu on the right of the page.

[ close ]

Sequence position where the (unsmoothed) match-probability curve for this motif attains its maximum. Set the smoothing window size ("Window:", to right of graph) to "1" to see the unsmoothed match probability curve.

[ close ]

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org.

If you use CentriMo in your research, please cite the following paper:
Timothy L. Bailey and Philip Machanick, "Inferring direct DNA binding from ChIP-seq", Nucleic Acids Research, 40:e128, 2012. [full text]

Motif Probability Graph   |   Enriched Motifs   |   Input Files   |   Program information

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Results

Motif Probability Graph (score ≥ 5 bits

Options

Plotting 
M0216_1.02
M5777_1.02
TGTAGTCCCAGCTACTCGGGAGGCTGAGGCA
Unused Colours 
Graph 

Enriched motifs (E-value ≤ 10 using the binomial test)

Database 
ID 
Alt ID 
Consensus 
E-value 
Fisher E-value 
p-value 
Negative p-value 
MCC 
Region Center 
Region Width 
Region Matches 
Total Matches 
Negative Region Matches 
Negative Total Matches 
Max Probability 
Max Probability Location 
Multiple Tests 
Score Threshold 
Other Regions 
Homo sapiensM0216_1.02(NHLH2)_(Mus_musculus)_(DBD_1.00)NGCAGCTGYN1.2e-411.6e-4403452530.2453-11.51395.00-
Homo sapiensM5777_1.02RFX4NGTWRCCATGGYWACS2.7e-393.6e-4202847490.26538.51365.00-
memeTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAMEME-10TGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2.7e-363.6e-3904352520.2692-161295.00-
Homo sapiensM6516_1.02TCF3GRVCATCTGKT5.5e-367.4e-390328530.245311395.00-
Homo sapiensM1418_1.02C11orf9TGGTACCA2.3e-353.1e-3802042510.24516.51405.00-
memeTAGTCCCAGCTACTCRGGAGGCTGAGGMEME-7TAGTCCCAGCTACTCRGGAGGCTGAGG5.5e-357.4e-3804352530.2642-161315.00-
memeCTGCCTCAGCCTCCCGAGTAGCTMEME-6CTGCCTCAGCCTCCCGAGTAGCT6.0e-338.0e-3605353530.2642-211335.00-
Homo sapiensM4476_1.02RFX5TCABYWGTTGCYRGG6.8e-339.2e-3603950540.2593141375.00-
Homo sapiensM1529_1.02(RFX7)_(Mus_musculus)_(DBD_1.00)VCNTRGCAAC8.8e-331.2e-3502844500.2400-10.51395.00-
Homo sapiensM4479_1.02TCF12VSAGCAGSTGB1.2e-321.6e-3503147540.2222-131395.00-
Homo sapiensM6325_1.02KLF6GGGGGCKG1.7e-302.3e-3302644540.1389-8.51405.00-
Homo sapiensM6355_1.02MYOGYRACAGCTGCWGC4.5e-306.1e-3302942480.2500-121385.00-
Homo sapiensM6513_1.02TFAP4RYCAGCTGYGG1.8e-292.4e-3204144460.2391-121395.00-
memeCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTMEME-8CCATTCTCCTGCCTCAGCCTCCCGAGTAGCT5.0e-296.7e-3206153530.2642-251295.00-
Homo sapiensM0431_1.02(OSR1)_(Mus_musculus)_(DBD_1.00)MCRGTAGCN5.1e-296.8e-3203948540.1852-141405.00-
Homo sapiensM6353_1.02MYF6GCAGSTG2.5e-273.3e-3003545540.1852-121415.00-
Homo sapiensM5563_1.02HOXD8VHWAATTADV5.7e-277.6e-3007253530.301924.51395.00-
Homo sapiensM1668_1.02PRKRIRNCCVNVSKRNNN1.5e-262.0e-2904247530.188715.51385.00-
Homo sapiensM5339_1.02DLX1NNTAATTRBN8.9e-261.2e-2807454540.259324.51395.00-
Homo sapiensM6347_1.02MSX2TAATTNK1.0e-251.4e-2807554540.2593-251415.00-
Homo sapiensM0961_1.02(BARHL1)_(Mus_musculus)_(DBD_1.00)NTAAWYGNN1.5e-252.0e-2807351510.2745251405.00-
Homo sapiensM1039_1.02(ENSG00000229544)_(Mus_musculus)_(DBD_1.00)NNTAATDRN1.8e-252.4e-2807954540.2407-241405.00-
Homo sapiensM6534_1.02VSX2WDMGCTAATTA1.9e-252.5e-2806748480.2500221395.00-
Homo sapiensM0943_1.02(OTP)_(Mus_musculus)_(DBD_1.00)NYTAATTR2.3e-253.1e-2807049490.285723.51405.00-
Homo sapiensM5771_1.02RAXDYTAATTRRY3.3e-254.5e-2807250500.2600-24.51395.00-
Homo sapiensM5949_1.02VSX1YTAATTAN9.2e-251.2e-2707249490.285724.51405.00-
Homo sapiensM0893_1.02ZFHX2NNTAATTANN1.3e-241.7e-2707249490.2857-24.51395.00-
Homo sapiensM1125_1.02(NKX1-1)_(Mus_musculus)_(DBD_1.00)NNTAATKRNN1.3e-241.7e-2707249490.2653-24.51395.00-
Homo sapiensM5390_1.02EN1VBTAATTRSB1.3e-241.7e-2707249490.2653-24.51395.00-
Homo sapiensM5480_1.02GBX1RSTAATTRGB1.3e-241.7e-2707249490.265324.51395.00-
Homo sapiensM1025_1.02(HOXD1)_(Mus_musculus)_(DBD_0.98)NNYVATYA3.8e-245.1e-2707047470.276623.51405.00-
Homo sapiensM6303_1.02HOXD4TTAATTKW6.2e-248.3e-2707453540.259324.51405.00-
Homo sapiensM1012_1.02(HOXB4)_(Mus_musculus)_(DBD_1.00)NTAATKRNN8.0e-241.1e-2607750500.2800251405.00-
Homo sapiensM1070_1.02(HOXC5)_(Mus_musculus)_(DBD_1.00)NTAATKRNN8.0e-241.1e-2607750500.2800251405.00-
Homo sapiensM5414_1.02ESX1SNTAATTRRN1.3e-231.7e-2607250510.2745-24.51395.00-
Homo sapiensM6380_1.02NOBOXHTAATTRSY1.3e-231.8e-2605746490.2449-251405.00-
Homo sapiensM6440_1.02PRRX2YTAATTR1.5e-232.0e-2607149500.2600-241415.00-
Homo sapiensM5602_1.02LHX9YTAATTRN3.4e-234.6e-2607249500.2600-24.51405.00-
Homo sapiensM5772_1.02RAX2BTAATTRR3.4e-234.6e-2607249500.2600-24.51405.00-
Homo sapiensM5807_1.02SHOX2YTAATTRR3.4e-234.6e-2607249500.2600-24.51405.00-
Homo sapiensM6188_1.02DLX2ATAATTRB3.4e-234.6e-2607249500.280024.51405.00-
Homo sapiensM6279_1.02HMGA1AAAATWN4.1e-235.5e-2607753540.3148-341415.00-
Homo sapiensM5284_1.02ALX3BBTAATTRGY4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM5388_1.02EMX2VYTAATTAVB4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM5394_1.02EN2NNTAATTRVN4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM5427_1.02EVX1SNTAATYABB4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM5481_1.02GBX2NYTAATTRSB4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM6189_1.02DLX3GMTAATTRSW4.8e-236.5e-2607249500.2600-24.51395.00-
Homo sapiensM0900_1.02SHOXHTAATTRV5.5e-237.5e-2605847510.274524.51405.00-
Homo sapiensM6281_1.02HNF1AKGKTAAWBATTAACY6.5e-238.7e-2607551520.2885261375.00-
Homo sapiensM0905_1.02(HOXA4)_(Mus_musculus)_(DBD_1.00)NTAATKRNN8.0e-231.1e-2507349500.2800251405.00-
Homo sapiensM1071_1.02(HOXD3)_(Mus_musculus)_(DBD_1.00)NTAATKRN1.3e-221.8e-2507650510.274524.51405.00-
Homo sapiensM5705_1.02PAX4YTAATTAG1.3e-221.8e-2507248490.285724.51405.00-
Homo sapiensM6552_1.02ZNF148KGVGKGGGGGAGGGG1.7e-222.4e-2506147500.1400-281375.00-
Homo sapiensM5541_1.02HOXB2NNTAATKANN1.8e-222.5e-2507248490.2857-24.51395.00-
Homo sapiensM5631_1.02MIXL1NBTAATTRVN1.8e-222.5e-2507248490.2857-24.51395.00-
Homo sapiensM5672_1.02NOTONBTAATTARN1.8e-222.5e-2507248490.285724.51395.00-
Homo sapiensM6416_1.02CBFBYYTGTGGTYDB2.0e-222.7e-2501331540.1852-41395.00-
Homo sapiensM5542_1.02HOXB3NYTAATKRNN2.5e-223.3e-2507250520.2692-24.51395.00-
Homo sapiensM0975_1.02(LHX5)_(Mus_musculus)_(DBD_1.00)TAATTRVNN3.0e-224.0e-2507549500.2800261405.00-
Homo sapiensM1073_1.02(HOXA3)_(Mus_musculus)_(DBD_1.00)HTAATKRNN3.0e-224.0e-2507750510.2745251405.00-
Homo sapiensM5342_1.02DLX4NTAATTRB5.1e-226.8e-2507247480.2708-24.51405.00-
Homo sapiensM5343_1.02DLX5NTAATTRN5.1e-226.8e-2507247480.270824.51405.00-
Homo sapiensM5344_1.02DLX6NTAATTRB5.1e-226.8e-2507247480.2708-24.51405.00-
Homo sapiensM5310_1.02BSXBTAATBRS6.6e-228.9e-2507249510.2549-24.51405.00-
Homo sapiensM4708_1.02TBPTATGCAAATA7.6e-221.0e-2408453540.3148-30.51395.00-
Homo sapiensM5543_1.02HOXB5NHTAATKRNN9.2e-221.2e-2407249510.2745-24.51395.00-
Homo sapiensM6315_1.02ISL1SYTAATR1.0e-211.4e-2405542450.2667231415.00-
Homo sapiensM6363_1.02NFATC2RWTTTTCCA1.1e-211.5e-2408151520.2500-351405.00-
Homo sapiensM6415_1.02PDX1CTAATTACY1.1e-211.5e-2407347480.2708-251405.00-
Homo sapiensM5944_1.02VAX1YTAATTAN2.5e-213.3e-2407248500.280024.51405.00-
Homo sapiensM5428_1.02EVX2NBTAATKABB3.5e-214.7e-2407248500.2600-24.51395.00-
Homo sapiensM0949_1.02(AC012531.1)_(Mus_musculus)_(DBD_1.00)NTAATDR3.6e-214.8e-2405745500.2800241415.00-
Homo sapiensM1163_1.02(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00)NWTAATKRN5.6e-217.6e-2407348500.2600-251405.00-
Homo sapiensM2306_1.02POU2F2NDNATTTGCATRW7.7e-211.0e-2308348480.2917-301385.00-
Homo sapiensM0892_1.02EMX1VYTAATKAVB1.3e-201.7e-2307247490.2653-24.51395.00-
Homo sapiensM0931_1.02(LHX1)_(Mus_musculus)_(DBD_1.00)TAATTRNNN2.0e-202.7e-2307548500.2800261405.00-
Homo sapiensM0108_1.02(ARID5A)_(Mus_musculus)_(DBD_0.97)NNTAATATTKN2.9e-203.9e-2307347490.2245-251395.00-
Homo sapiensM6365_1.02NFATC4WADTTTTCCH4.4e-205.9e-2307849510.2353-35.51395.00-
Homo sapiensM5582_1.02IRX5SWTGTYRTGTWN4.6e-206.2e-2307250540.2593-28.51385.00-
memeTCTCTACTAAAAATACAAAAAATTAGCCGGGMEME-3TCTCTACTAAAAATACAAAAAATTAGCCGGG5.2e-207.0e-2307749500.3200311295.00-
Homo sapiensM6304_1.02HOXD9HMATNAAWYT9.1e-201.2e-2208446460.260927.51395.00-
Homo sapiensM5616_1.02MEF2BRCTAWAAATAGC1.0e-191.4e-2209853530.3396-35.51385.00-
Homo sapiensM0894_1.02LBX1TTAATTAG1.3e-191.8e-2207245470.2553-24.51405.00-
Homo sapiensM0999_1.02(NKX6-1)_(Mus_musculus)_(DBD_1.00)NWTAATKRN1.5e-192.0e-2205945510.2549-251405.00-
Homo sapiensM6271_1.02HES1KGKCKCGTGBCKB1.8e-192.4e-220115540.277801385.00-
Homo sapiensM0969_1.02(LHX8)_(Mus_musculus)_(DBD_1.00)NYAATYANN1.9e-192.6e-2207148520.2692-241405.00-
Homo sapiensM0396_1.02(OSR2)_(Mus_musculus)_(DBD_1.00)HACRGTAGCN3.6e-194.9e-2204041540.166714.51395.00-
Homo sapiensM5945_1.02VAX2YTAATTAN4.3e-195.8e-2207246490.2653-24.51405.00-
Homo sapiensM0633_1.02DMRT2KAATKTATWN4.6e-196.1e-2207650540.259326.51395.00-
Homo sapiensM6149_1.02ARID5BDBYKDGTATTSKR5.9e-197.9e-2207350540.3333321385.00-
Homo sapiensM5581_1.02IRX2CDTGTCRTGTWN5.9e-198.0e-2207248520.2692-28.51385.00-
Homo sapiensM1027_1.02(HOXA6)_(Mus_musculus)_(DBD_1.00)HTAATKRBN8.7e-191.2e-2107748510.2745251405.00-
Homo sapiensM5744_1.02POU5F1BATTWGCATA1.4e-181.9e-2108547480.2708-311405.00-
memeCGGCTAATTTTTTGTATTTTTAGTAGAGACGMEME-2CGGCTAATTTTTTGTATTTTTAGTAGAGACG1.8e-182.4e-2108949490.3673331295.00-
Homo sapiensM6423_1.02POU2F1ATTTGCATD2.4e-183.2e-2108549510.2941-311405.00-
Homo sapiensM2299_1.02(MYF5)_(Mus_musculus)_(DBD_0.90)NRNRRCAGCTGSN2.8e-183.8e-2103739530.1132131385.00-
Homo sapiensM6342_1.02MEF2DBCTAWAAATAGC3.6e-184.9e-2109853540.333335.51385.00-
Homo sapiensM0958_1.02(LHX4)_(Mus_musculus)_(DBD_1.00)BYAATYW3.7e-185.0e-2105745540.2407-241415.00-
Homo sapiensM6123_1.02(ZNF281)_(Mus_musculus)_(DBD_1.00)GRGKTGGGGGAGGGG3.8e-185.1e-2106746510.2353-281375.00-
Homo sapiensM5294_1.02BARHL2NHTAAAYGNY7.2e-189.7e-2107445480.270824.51395.00-
Homo sapiensM4461_1.02ETS1GCMTBCTGGGARWTGTAGTYY8.1e-181.1e-200719310.2581-21345.00-
Homo sapiensM6442_1.02PURACCMBGCCCNCCMMYWCC1.4e-171.9e-2006547540.2407271365.00-
Homo sapiensM1594_1.02(SOX12)_(Mus_musculus)_(DBD_1.00)HWTTGTYNNN1.7e-172.3e-2007449540.2593-31.51395.00-
Homo sapiensM5624_1.02MEOX2NSTAATTAWN2.0e-172.7e-2007245490.265324.51395.00-
Homo sapiensM4681_1.02BACH2TGCTGAGTCA5.4e-177.2e-2006442470.2766-26.51395.00-
Homo sapiensM2313_1.02(SOX6)_(Mus_musculus)_(DBD_1.00)CCWTTGTYYY9.2e-171.2e-1908250540.2407-35.51395.00-
Homo sapiensM5746_1.02POU6F2WTAATKAGST1.6e-162.1e-1907044490.2857-23.51395.00-
Homo sapiensM0085_1.02(TFAP2E)_(Mus_musculus)_(DBD_0.99)THGCCYSVGG2.1e-162.8e-1905844530.169827.51395.00-
Homo sapiensM5782_1.02RHOXF1GGATDAKCC2.1e-162.8e-1906946530.2264231405.00-
Homo sapiensM6357_1.02NANOGKTTAATGG2.8e-163.8e-1909047490.265336.51405.00-
Homo sapiensM6273_1.02HEY2GBBGGCWCGTGGCHTBV4.1e-165.5e-1901125530.22641261365.00-
Homo sapiensM5604_1.02LMX1AYTAATTAA4.6e-166.2e-1905840470.276624.51405.00-
Homo sapiensM6477_1.02SOX5WAACAATR4.7e-166.3e-1908049540.2593-35.51405.00-
Homo sapiensM6280_1.02HMGA2AATWWYSSSSAATAT5.2e-167.0e-1908339390.3333-301375.00-
Homo sapiensM0630_1.02DMRT1WWTGTWDCNW5.3e-167.1e-1908848510.2941-32.51395.00-
Homo sapiensM6292_1.02HOXA5CATTAATYAR5.5e-167.4e-1906041480.270825.51395.00-
Homo sapiensM5637_1.02MSX1TAATTGSWWTTTAATTGS6.9e-169.3e-1907846500.300034.51355.00-
Homo sapiensM5502_1.02GSX1NBTAATKRSN7.1e-169.5e-1905841490.265324.51395.00-
Homo sapiensM5503_1.02GSX2DYTAATKRSN7.1e-169.5e-1905841490.265324.51395.00-
Homo sapiensM0906_1.02(VTN)_(Mus_musculus)_(DBD_0.79)NMTTAATTAR7.9e-161.1e-1807443470.255325.51395.00-
memeGCTAATTTTTTGTATTTTTAGTAGAGACGGGMEME-1GCTAATTTTTTGTATTTTTAGTAGAGACGGG9.2e-161.2e-1809345450.4000351295.00-
Homo sapiensM5519_1.02HMX2NDTTAAKTGBT9.2e-161.2e-1808349540.2037241395.00-
Homo sapiensM0632_1.02DMRTA2HHWGTWDYNN1.2e-151.6e-1807444480.3125-32.51395.00-
Homo sapiensM0896_1.02VENTXTTAATTAG1.4e-151.8e-1807243480.270824.51405.00-
Homo sapiensM4473_1.02PBX3NBCDGCCAATSRGVR1.5e-152.0e-1803531400.2250-141375.00-
memeYTWWTTTTTTGTATTTTTAGTAMEME-4YTWWTTTTTTGTATTTTTAGTA1.8e-152.4e-1807246520.346231.51335.00-
Homo sapiensM5445_1.02FOXD2DRTMAATATTWDYD2.0e-152.7e-1806642480.229225.51375.00-
Homo sapiensM1601_1.02(SOX11)_(Mus_musculus)_(DBD_1.00)WTTGTBNNN3.0e-154.1e-1807347540.2778321405.00-
Homo sapiensM6329_1.02LHX3AAAATTAATTARY4.6e-156.2e-1806139450.2889261385.00-
Homo sapiensM1863_1.02FOXD1GTAAACAW5.5e-157.4e-1809647490.3469-36.51405.00-
Homo sapiensM6354_1.02MYOD1RACAGSTGS7.1e-159.5e-1802733540.0926-121405.00-
Homo sapiensM1838_1.02TFAP2ANHYDGCCYSAGGGCA1.1e-141.5e-1706539440.2727271375.00-
Homo sapiensM6378_1.02NKX3-1WWTAAGTATWTWW2.1e-142.9e-1708949530.2830331385.00-
Homo sapiensM0756_1.02(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44)NNHMACANN2.2e-142.9e-1707344500.3000-321405.00-
Homo sapiensM6508_1.02TEAD3GAHATTYYWGCYBYW2.2e-143.0e-1708144480.2708-291375.00-
Homo sapiensM0890_1.02LHX6NYAATCAN3.4e-144.6e-1705842540.2222-24.51405.00-
Homo sapiensM5623_1.02MEOX1VSTAATTANS3.8e-145.1e-1707242480.2708-24.51395.00-
Homo sapiensM6115_1.02TP73CATGYCWGRRCHTGY4.9e-146.6e-1705942530.2642261375.00-
Homo sapiensM5568_1.02HSFY2TTCGAAHVRTTCGAA4.9e-146.6e-1709342430.3721-351375.00-
Homo sapiensM6557_1.02ZNF384GSAAAAAVYMBS6.3e-148.4e-1706243540.296326.51385.00-
Homo sapiensM4572_1.02MAFFTGCTGACTCAGCAWW7.4e-149.9e-1706942490.2653-291375.00-
Homo sapiensM0437_1.02(ZNF32)_(Mus_musculus)_(DBD_0.99)TATRTATRT1.6e-132.2e-1607943490.2517-321405.00-
Homo sapiensM6426_1.02POU3F2CATRAATWWT3.7e-134.9e-1607445540.2037-25.51395.00-
Homo sapiensM6417_1.02POU1F1RWATATTCATKAR4.0e-135.4e-1608347540.2778-371385.00-
Homo sapiensM1507_1.02(LCOR)_(Meleagris_gallopavo)_(DBD_1.00)NDWTTNGGNN5.7e-137.6e-1608247540.2037-29.51395.00-
Homo sapiensM0594_1.02(LIN54)_(Gallus_gallus)_(DBD_0.98)DTTTRAATN6.1e-138.2e-1607143520.3077-311405.00-
Homo sapiensM5635_1.02MNX1KTTAATTRNH6.6e-138.9e-16010250540.296339.51395.00-
Homo sapiensM1884_1.02MEF2ADKCTAAAAATAGMHH9.1e-131.2e-1507946540.3333351375.00-
Homo sapiensM6427_1.02POU4F2MARCTCATTAATR1.1e-121.5e-1507340460.2174-251385.00-
Homo sapiensM1592_1.02(SOX3)_(Mus_musculus)_(DBD_1.00)NNNWCAAT1.2e-121.6e-1507441470.2979-31.51405.00-
Homo sapiensM6525_1.02TLX1YGBYAAKDWGS1.3e-121.7e-1505539520.1346-241395.00-
Homo sapiensM2287_1.02(HOXC9)_(Mus_musculus)_(DBD_0.98)RGCCATAAATCAB1.5e-122.0e-1507740450.2889-271385.00-
Homo sapiensM6346_1.02MLXIPLVCACGVSGKKGBCMCRTGC1.7e-122.3e-15011549500.3600-531355.00-
Homo sapiensM0300_1.02(ATF2)_(Mus_musculus)_(DBD_1.00)NRTKACGTMA2.0e-122.7e-1509246510.2353-40.51395.00-
Homo sapiensM6544_1.02HIVEP1VGGGATTTCCCA2.0e-122.7e-15011644440.3636-53.51385.00-
Homo sapiensM6448_1.02RELBRGGGRMTTTCCM3.2e-124.3e-15012849490.3469-52.51385.00-
Homo sapiensM6166_1.02CDC5LRWTAYRTTAAMWCVC3.4e-124.5e-1507134370.3514-281375.00-
Homo sapiensM6364_1.02NFATC3RDTTTTCCA3.7e-124.9e-1507743510.1961351405.00-
Homo sapiensM6322_1.02KLF1CAGGGTGKGGC4.2e-125.7e-1505740530.1792-251395.00-
Homo sapiensM4612_1.02CTCFLCCRSCAGGGGGCGCY4.4e-125.9e-15012150510.2157-551375.00-
Homo sapiensM5605_1.02LMX1BTTAATTRN5.0e-126.7e-1505840540.259324.51405.00-
Homo sapiensM2281_1.02FOXH1BNSAATCCACA6.0e-128.0e-1507539440.2955-331395.00-
Homo sapiensM1582_1.02(HMG20B)_(Mus_musculus)_(DBD_0.94)NWAWATAATWN1.0e-111.4e-1407142520.2115271395.00-
Homo sapiensM5509_1.02HEY1GRCACGTGBC1.1e-111.5e-1401818250.1600-0.51395.00-
Homo sapiensM0635_1.02(DMRTC2)_(Mus_musculus)_(DBD_1.00)NAMATGTATHMWN1.1e-111.5e-1407343520.2500-321385.00-
Homo sapiensM5518_1.02HMX1NNTTAATTGNT1.4e-111.9e-1405739530.2642241395.00-
Homo sapiensM1906_1.02SP1GGGGGMGGGGC1.5e-112.0e-14012352540.2407561395.00-
Homo sapiensM5322_1.02CPEB1YTTTTATY2.1e-112.9e-1408445540.2778-37.51405.00-
Homo sapiensM6449_1.02RELDKGGRNWTTCCV3.3e-114.4e-14012846460.326151.51385.00-
Homo sapiensM5729_1.02POU2F3ATTWGCATA3.3e-114.4e-1406537450.2889-311405.00-
Homo sapiensM6246_1.02FOXO3MKGWAAACAARYM3.5e-114.8e-1407744540.2963-341385.00-
Homo sapiensM5740_1.02POU4F1ATGMATAATTAATG7.5e-111.0e-1307840470.2979-35.51375.00-
Homo sapiensM1968_1.02EBF1TCCCWGGGGRV8.8e-111.2e-13011342430.1628511395.00-
Homo sapiensM6546_1.02ZFHX3RTTAWTAATTA9.6e-111.3e-1307739460.2826271395.00-
Homo sapiensM1841_1.02ARGNACABNVTGTTCYY1.0e-101.4e-13012749500.3400-591375.00-
Homo sapiensM6328_1.02LHX2YRSDTKYAATWAG1.0e-101.4e-1307743530.2453-271385.00-
Homo sapiensM5504_1.02HES5YGGCACGTGYCR1.4e-101.9e-1301817240.1250-0.51385.00-
Homo sapiensM6282_1.02HNF1BGTTAAWYATTAACY1.4e-101.9e-1307439470.234025.51375.00-
Homo sapiensM5743_1.02POU4F3RTGMATWATTAATGAV2.5e-103.4e-1308040470.2766-36.51365.00-
Homo sapiensM6249_1.02FOXP3AAWCAMATT3.0e-104.1e-1307142540.2222-301405.00-
Homo sapiensM5446_1.02FOXD4L2GTAAACA3.3e-104.4e-1307942510.2843-351415.00-
Homo sapiensM4484_1.02ZNF143CTGGGARTTGTAGTY3.7e-105.0e-130110500.200001375.00-
Homo sapiensM5735_1.02POU3F3WAATTWGCATAWW4.2e-105.6e-1307139490.2653-311385.00-
Homo sapiensM1928_1.02NFKB1KGGRMTTTCCM4.9e-106.6e-13012947480.2708-531395.00-
Homo sapiensM0942_1.02(IRX4)_(Mus_musculus)_(DBD_1.00)DTGTHNNN5.0e-106.7e-1306837460.3043-32.51405.00-
Homo sapiensM4444_1.02RELADGGGRMTTTCCMVN5.0e-106.8e-13011638380.3158-53.51375.00-
Homo sapiensM6221_1.02ETS2VMVGGAAGTKS5.3e-107.1e-13011750540.2037-531395.00-
Homo sapiensM6167_1.02CDX1HCATAAAD5.3e-107.2e-1306640540.2037-28.51405.00-
Homo sapiensM6267_1.02GLIS3GYGGGGGGTM5.5e-107.4e-1302827490.1224-6.51395.00-
Homo sapiensM6150_1.02ARNT2GYSYSCCACGNC5.8e-107.8e-1302025540.18528.51385.00-
Homo sapiensM1589_1.02(SOX30)_(Mus_musculus)_(DBD_1.00)NNDNRACAAT5.8e-107.8e-1307242540.1852-33.51395.00-
Homo sapiensM2388_1.02SREBF2RTGGGGTGAY7.0e-109.4e-1309446540.2407-41.51395.00-
Homo sapiensM0737_1.02(FOXB2)_(Mus_musculus)_(DBD_0.94)WRWGTAAAYA7.6e-101.0e-1208444540.2407-30.51395.00-
Homo sapiensM6250_1.02FOXQ1AAATAAACAATD8.8e-101.2e-1208041500.240028.51385.00-
Homo sapiensM6366_1.02NFAT5MAKGRANTTTTCCRS9.9e-101.3e-12011537370.4054-531375.00-
Homo sapiensM6196_1.02E2F7WWDGGCGCGAAAM1.1e-91.5e-1209537390.2821-421385.00-
Homo sapiensM6201_1.02EGR4GGSGGYRGGGM1.2e-91.6e-1201723530.169871395.00-
Homo sapiensM1110_1.02(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77)NNNYMATNNN1.3e-91.7e-1207834380.342134.51395.00-
Homo sapiensM6114_1.02FOXA1WAWGYAAAYA1.3e-91.7e-1207843540.2407-30.51395.00-
Homo sapiensM6470_1.02SOX10BCWTTGT2.4e-93.3e-1206740540.2593291415.00-
Homo sapiensM5512_1.02HIC2VSYGGGCAY2.5e-93.4e-1203731540.0926-901405.00-
Homo sapiensM5557_1.02HOXD12GTAATAAAA2.7e-93.6e-1208744540.3148391405.00-
Homo sapiensM6413_1.02PBX2VMATCAATCAMWTYM2.7e-93.7e-1206537490.2449-281375.00-
Homo sapiensM6239_1.02FOXF2HWADGTAAACA3.6e-94.8e-1207141540.2407-311395.00-
Homo sapiensM4567_1.02FOXA2NCWRWGTAAACANNN5.2e-97.0e-1208341500.2600-301375.00-
Homo sapiensM4569_1.02HSF1GTCSYGGGTTCGADTCCC5.4e-97.3e-12014247470.2766-68.51355.00-
Homo sapiensM6420_1.02PLAG1GGRGGSMHNWVKAGGGG6.0e-98.0e-1207742540.2037-331365.00-
Homo sapiensM0199_1.02(HES2)_(Mus_musculus)_(DBD_0.83)NNNNGRCACGTGM6.2e-98.4e-120714350.114321385.00-
Homo sapiensM5553_1.02HOXC13CYAATAAAAH7.2e-99.7e-1208443540.314838.51395.00-
Homo sapiensM5643_1.02MYBL1RCCGTTAAACBG7.3e-99.9e-12011839400.325054.51385.00-
Homo sapiensM6285_1.02ONECUT1WWTATTGATTTWDH7.6e-91.0e-1107238480.229232.51375.00-
Homo sapiensM5977_1.02ZNF740GTGGGGGGGK8.4e-91.1e-1102220350.22866.51395.00-
Homo sapiensM2273_1.02E2F6RGGCGGGARRV8.9e-91.2e-1107541540.2037321395.00-
Homo sapiensM6339_1.02MECP2YYCCGGS1.4e-81.9e-11011341440.2500501415.00-
Homo sapiensM6375_1.02NKX2-2HAAVYACTTRAM1.8e-82.4e-1108642520.211531.51385.00-
Homo sapiensM6515_1.02TFDP1AWWKRGCGGGAAAY2.2e-82.9e-1109438430.2558-41.51375.00-
Homo sapiensM6490_1.02SRYDAAACAAWR2.3e-83.1e-1107140540.2778-311405.00-
Homo sapiensM6301_1.02HOXD10AATTAAARCA3.2e-84.4e-1107841540.2037-26.51395.00-
Homo sapiensM5493_1.02GMEB2KTRCGTAA3.8e-85.2e-1109438430.2791-41.51405.00-
Homo sapiensM0104_1.02(ARID3B)_(Mus_musculus)_(DBD_0.99)AWATTAATWAN5.4e-87.3e-1108539480.2500-391395.00-
Homo sapiensM2390_1.02EHFSAGGAAGK5.9e-88.0e-1106635480.2396-29.51405.00-
Homo sapiensM6157_1.02BARX2TYRWTAATKR6.0e-88.1e-1105428380.2105-22.51395.00-
Homo sapiensM6517_1.02TFE3RGTCAYGTGV9.5e-81.3e-10016653530.3774-81.51395.00-
Homo sapiensM6336_1.02MAZRGGGDRGGGAGGGRGGG1.6e-72.1e-1005936540.1481261365.00-
Homo sapiensM6392_1.02NR2F6YYMNNTGAMCTTTGWCCY2.0e-72.7e-1007636460.2826-33.51355.00-
Homo sapiensM5594_1.02LBX2CTBRANSTRATTA2.0e-72.8e-10016552520.2500-781385.00-
Homo sapiensM2387_1.02SREBF1RTGGGGTGAB2.0e-72.8e-10017054540.185241.51395.00-
Homo sapiensM5932_1.02TFECVTCAYGTGAY2.0e-72.8e-10017054540.3704-80.51395.00-
Homo sapiensM4467_1.02MEF2CNDKCYAAAAATAGMH2.4e-73.2e-1008141540.2963-361375.00-
Homo sapiensM0196_1.02(NPAS2)_(Mus_musculus)_(DBD_1.00)NSCACGTGTN2.9e-73.9e-100811210.1905-0.51395.00-
Homo sapiensM0178_1.02(ASCL2)_(Mus_musculus)_(DBD_0.98)NVCAGCTGBN3.1e-74.2e-10028230.1739-0.51395.00-
Homo sapiensM5955_1.02YY2WAATGGCGGWY3.2e-74.3e-1009141510.2157-401395.00-
Homo sapiensM6382_1.02NR1D1WYTGACCTAYTTWT3.4e-74.5e-10016652520.423178.51375.00-
Homo sapiensM1917_1.02USF1GGTCACRTGRB3.4e-74.6e-10017154540.3796-811395.00-
Homo sapiensM6425_1.02POU3F1HTTGCATWWSMATB3.4e-74.6e-1009239470.2553-34.51375.00-
Homo sapiensM6402_1.02OVOL1KGTAACKGT3.4e-74.6e-1001111170.2353-11405.00-
Homo sapiensM6482_1.02SP3VGVVGGGGGCGGGGCBRGSS4.4e-75.9e-10012449540.203756.51345.00-
Homo sapiensM6430_1.02PPARATGACCTY4.9e-76.6e-10016353540.4074771415.00-
Homo sapiensM6443_1.02RARATGACCTB4.9e-76.6e-10016353540.4074771415.00-
Homo sapiensM4481_1.02USF2GGTCACGTGRSSSSV5.5e-77.5e-10016752520.3654-791375.00-
Homo sapiensM0718_1.02FOXK1NNRTMAACAH6.0e-78.1e-1008040540.2407-33.51395.00-
Homo sapiensM1458_1.02(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00)NNTGACCTCN6.1e-78.2e-10016253540.407476.51395.00-
Homo sapiensM6532_1.02VDRTGAMCYC6.7e-79.0e-10015953540.3333771415.00-
Homo sapiensM6228_1.02FOSBCTGACTCAYV7.0e-79.4e-1006633460.2174-27.51395.00-
Homo sapiensM6037_1.02(IRX1)_(Mus_musculus)_(DBD_1.00)TTTKTCATGTWR7.6e-71.0e-908040540.2037-28.51385.00-
Homo sapiensM4511_1.02RXRATGACCYYW8.0e-71.1e-9016453540.370477.51405.00-
Homo sapiensM5632_1.02MLXRTCACGTGAT9.1e-71.2e-9017051510.3725-80.51395.00-
Homo sapiensM6529_1.02UBP1TYTCTGS9.3e-71.3e-909541510.2941431415.00-
Homo sapiensM1432_1.02NR2E1NYTGACCTCD1.0e-61.4e-9016252530.3962-76.51395.00-
Homo sapiensM5116_1.02(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70)RCCACCTGK1.1e-61.5e-90311530.16981231405.00-
Homo sapiensM6152_1.02ATF1VTGACGTCAV1.1e-61.5e-909438460.2391-41.51395.00-
Homo sapiensM5460_1.02FOXL1RTAAACA1.2e-61.6e-909341510.2353351415.00-
Homo sapiensM6478_1.02SOX9ARAACAATRGR1.3e-61.7e-907739540.2593301395.00-
Homo sapiensM6332_1.02MAFKTGCTGAC1.3e-61.8e-9015652540.324173.51405.00-
Homo sapiensM2268_1.02CEBPBKATTGCAYMAY1.3e-61.8e-9016950500.3000-551395.00-
Homo sapiensM6445_1.02RARBBBBBTGACCTS1.4e-61.8e-9015953540.4074751395.00-
Homo sapiensM4680_1.02BACH1GTCACGTG1.8e-62.4e-9017254540.3241-81.51405.00-
Homo sapiensM6394_1.02NR4A2STGACCTTT2.0e-62.7e-9016351520.4038771405.00-
Homo sapiensM6545_1.02HIVEP2GGYDGGGWAACYSS2.2e-63.0e-908037490.1429-34.51375.00-
Homo sapiensM4702_1.02NR2F2TGACCTTT2.3e-63.1e-9016451520.423177.51405.00-
Homo sapiensM4553_1.02BHLHE40NGKCACGTGC2.8e-63.7e-9049240.1667-1.51395.00-
Homo sapiensM2314_1.02SP2SSSVRGRGGCGGGRC3.0e-64.1e-9011947540.2037-541375.00-
Homo sapiensM6337_1.02MBD2SSGKCCGGMGR3.2e-64.2e-9016552530.3396-741395.00-
Homo sapiensM6454_1.02RORATGACCTAVWTWH3.2e-64.4e-9016848480.437579.51385.00-
Homo sapiensM6540_1.02ZBTB4CAATRGYGDTKGYGR3.6e-64.8e-903119310.1935121375.00-
Homo sapiensM6215_1.02ESRRBTGACCTTGR3.7e-65.0e-9016551520.3846-781405.00-
Homo sapiensM6216_1.02ESRRGTGACCTTGA3.7e-65.0e-9016551520.4038781405.00-
Homo sapiensM6498_1.02NR5A1TGRCCTTGR3.7e-65.0e-9016551520.3462-781405.00-
Homo sapiensM6293_1.02HOXA7KCCAATCKATYGAKB3.8e-65.1e-906934480.2083-271375.00-
Homo sapiensM6173_1.02CEBPGVAGATTGCAHAAT3.9e-65.2e-9016550500.1800-321385.00-
Homo sapiensM1605_1.02(SOX1)_(Mus_musculus)_(DBD_1.00)ATTSWHNNNN4.1e-65.5e-908039540.185228.51395.00-
Homo sapiensM6446_1.02RARGBTGACCTBYNGBYGAMCYCC4.9e-66.7e-9017454540.4074-82.51345.00-
Homo sapiensM6393_1.02NR4A1BTGACCTTB5.8e-67.8e-9016349500.3400-771405.00-
Homo sapiensM5634_1.02MNTRVCACGTGMH6.2e-68.3e-9016444440.4318-80.51395.00-
Homo sapiensM4537_1.02E2F4SGCGGGAARWTBVRR7.3e-69.9e-9017753530.1509871375.00-
Homo sapiensM0433_1.02(ZBTB12)_(Mus_musculus)_(DBD_1.00)NYCTAGAACN8.0e-61.1e-8015645460.3043-64.51395.00-
Homo sapiensM5530_1.02HOMEZTWTAATCGTTTT8.3e-61.1e-806635530.2264-29.51385.00-
Homo sapiensM6331_1.02MAFBWGCTGACDS8.9e-61.2e-8014951540.1111-261405.00-
Homo sapiensM6471_1.02SOX13YATTGTTY9.0e-61.2e-807838540.1204-35.51405.00-
Homo sapiensM6395_1.02NR4A3STGACCTTTG9.1e-61.2e-8016449500.380077.51395.00-
Homo sapiensM0747_1.02(FOXL2)_(Mus_musculus)_(DBD_0.70)WNNRTAAAYA9.2e-61.2e-808239540.2222-36.51395.00-
Homo sapiensM6475_1.02SOX2WTTTGCATRACAAWGG9.6e-61.3e-807638540.222232.51365.00-
Homo sapiensM0195_1.02(TCF23)_(Mus_musculus)_(DBD_0.60)DMCAKMTGKH1.0e-51.4e-8027210.1905-0.51395.00-
Homo sapiensM6523_1.02THRBTGACCTSABSTSRSSYC1.1e-51.4e-8016753540.1852-821365.00-
Homo sapiensM4451_1.02ATF3GGTCACGTGRS1.2e-51.6e-8017153540.3333-811395.00-
Homo sapiensM6461_1.02RXRBYSTGACCTSA1.2e-51.6e-8016252540.388976.51395.00-
Homo sapiensM6244_1.02FOXM1RWAAWCAMWCAAV1.2e-51.7e-807137540.2407-321385.00-
Homo sapiensM1545_1.02GMEB1NNNRCGTNN1.3e-51.7e-808937470.1702-411405.00-
Homo sapiensM6506_1.02TCF7VHSCTTTGWWST1.4e-51.9e-806229420.2857-26.51385.00-
Homo sapiensM6181_1.02CREMCRVTGACGTCA1.8e-52.4e-809139510.2157-401395.00-
Homo sapiensM6455_1.02RORCCTGACCYACWTWH2.2e-53.0e-8016744440.4545791385.00-
Homo sapiensM0736_1.02(FOXK2)_(Mus_musculus)_(DBD_0.90)RTMAACAA2.2e-53.0e-807437540.2407-32.51405.00-
Homo sapiensM1934_1.02ESR1RGGTCAGGGTGACCTKGSNB2.2e-53.0e-8015646470.361769.51345.00-
Homo sapiensM6302_1.02HOXD13TCYCTAATAAA2.6e-53.5e-808940540.2778411395.00-
Homo sapiensM5805_1.02SCRT2RWGCAACAGGTGB2.7e-53.6e-80118100.300021385.00-
Homo sapiensM6159_1.02BCL6TTCCWRGAAWGYHYWH2.8e-53.7e-807236530.1509-32.51365.00-
Homo sapiensM6330_1.02MAFASTGCTGACBMYGCARYHTYCV2.8e-53.8e-8017954540.1667281345.00-
Homo sapiensM0442_1.02(ZBTB3)_(Mus_musculus)_(DBD_1.00)NNTGCAGYG2.9e-53.9e-8018754540.2407881405.00-
Homo sapiensM6457_1.02RUNX1WAACCACARW3.0e-54.0e-8013041450.2444-60.51395.00-
Homo sapiensM6521_1.02THRASTGACCTSAV3.7e-54.9e-8016451530.396277.51395.00-
Homo sapiensM4665_1.02GATA3VWGATARSVATCWSY3.8e-55.1e-8013742450.2111-651375.00-
Homo sapiensM4930_1.02(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61)RADTCGTGACT4.2e-55.6e-8016748490.1837-661395.00-
Homo sapiensM1266_1.02(IRF6)_(Mus_musculus)_(DBD_1.00)NVNCGAWACY4.9e-56.6e-8013648540.259365.51395.00-
Homo sapiensM6268_1.02HAND1AAWKCCAGAYVC6.6e-58.9e-8013648540.1667-65.51385.00-
Homo sapiensM5377_1.02ELF4AACCCGGAAGTR8.0e-51.1e-7011231340.2647-50.51385.00-
Homo sapiensM6161_1.02BHLHE41WSVRKSYCACGTGMHGRRRV1.0e-41.4e-7018454540.3148-72.51345.00-
Homo sapiensM2391_1.02KLF5DGGGHGGGGC1.1e-41.5e-7012045540.1852-56.51395.00-
Homo sapiensM4543_1.02MXI1VVVVCCACGTG1.3e-41.7e-7017544440.3182-781395.00-
Homo sapiensM4840_1.02(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91)AAAWGMGCAWC1.3e-41.8e-707336540.2407-331395.00-
Homo sapiensM6208_1.02ELK3VMCHGGAARTSC1.4e-41.9e-7014837380.315871.51385.00-
Homo sapiensM5321_1.02CLOCKAACACGTGTH1.6e-42.1e-7026170.2353-122.51395.00-
Homo sapiensM2310_1.02RUNX2MAAACCACARAMMMM1.7e-42.2e-7012341470.1702-591375.00-
Homo sapiensM6234_1.02FOXA3RVWAARYAAAYAD1.7e-42.3e-707135540.2407-311385.00-
Homo sapiensM6241_1.02FOXJ2WAAAYAAACA1.9e-42.6e-707035540.2407-30.51395.00-
Homo sapiensM4454_1.02BRCA1ARVTCTCGCGAGAVB2.0e-42.7e-704920290.2759191375.00-
Homo sapiensM6139_1.02AHRKCACGCRAH2.0e-42.7e-709339530.2075411405.00-
Homo sapiensM1528_1.02(RFX6)_(Mus_musculus)_(DBD_0.66)VCNTRGYWAC2.1e-42.9e-702822530.1887101.51395.00-
Homo sapiensM6180_1.02CREB1RTGACGTMA2.3e-43.1e-7017151530.1698-411405.00-
Homo sapiensM1157_1.02(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00)WTTWATKRBN2.5e-43.3e-708638540.203739.51395.00-
Homo sapiensM5497_1.02GRHL1AACCGGTYTAACCGGTT2.6e-43.5e-70179120.333351365.00-
Homo sapiensM5571_1.02ID4DVCAGGTGYN4.0e-45.4e-7028520.2500122.51395.00-
Homo sapiensM6235_1.02FOXC1CYWAAGTAAACAWHG4.1e-45.5e-707736540.2222-341375.00-
Homo sapiensM6483_1.02SP4GSGGCCRGGGGSGGGGSGGSSSSR4.5e-46.0e-705027470.1489-91.51325.00-
Homo sapiensM5804_1.02SCRT1RWGCAACAGGTGKBH4.5e-46.1e-7097100.300011375.00-
Homo sapiensM4971_1.02(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89)GTVACAGVTG4.9e-46.6e-702214280.1071-106.51395.00-
Homo sapiensM5962_1.02ZBTB7CNTCGGTGGTCGY5.3e-47.1e-7013046540.2037-60.51385.00-
Homo sapiensM1628_1.02(TBX10)_(Mus_musculus)_(DBD_0.87)AGGTGTGAANN5.6e-47.6e-709338520.2308431395.00-
Homo sapiensM6559_1.02ZNF589CCMASGGKWWYWRCCS5.7e-47.7e-7017051530.2075-52.51365.00-
Homo sapiensM6555_1.02ZNF333SKATAATGA7.4e-41.0e-607931430.2326-351405.00-
Homo sapiensM1871_1.02(KLF2)_(Mus_musculus)_(DBD_0.95)DGGGYGKGGC7.9e-41.1e-605229540.1574-136.51395.00-
Homo sapiensM5520_1.02HMX3BNTTAAKTGNY8.4e-41.1e-605730530.16981071395.00-
Homo sapiensM0994_1.02(SIX4)_(Mus_musculus)_(DBD_1.00)NYKAYMCBN8.6e-41.2e-6017951520.1731851405.00-
Homo sapiensM1049_1.02(SIX1)_(Mus_musculus)_(DBD_1.00)NYGATAYNNN8.8e-41.2e-6018052530.3019-85.51395.00-
Homo sapiensM6518_1.02TFEBRGTCACGTG1.0e-31.4e-6017338380.4868-821405.00-
Homo sapiensM4459_1.02EGR1SBGCGKGGGCGGVGGSGSGG1.1e-31.5e-602821510.07846.51345.00-
Homo sapiensM1889_1.02MAXRRGCACATGK1.2e-31.6e-6049440.295581.51395.00-
Homo sapiensM6212_1.02EPAS1CMCACGYAYDCAC1.2e-31.6e-603121480.18751231385.00-
Homo sapiensM6176_1.02NR2F1TGACCTTTGVMC1.2e-31.6e-6016851540.1852-79.51385.00-
Homo sapiensM5941_1.02UNCXNTAATYBAATTAN1.3e-31.8e-606323330.1212-221385.00-
Homo sapiensM6200_1.02EGR3WGAGTGGGYGT1.3e-31.8e-6010739500.2800-491395.00-
Homo sapiensM1927_1.02(MYCL1)_(Mus_musculus)_(DBD_0.66)RCCACGTG1.5e-32.0e-6016242440.3636-79.51405.00-
Homo sapiensM6422_1.02PLAGL1CRGGGGGCCC1.5e-32.1e-604827510.166721.51395.00-
Homo sapiensM6162_1.02ARNTLGRGTCACGTGTYCM1.6e-32.1e-6016440410.4390-80.51375.00-
Homo sapiensM6146_1.02TFAP2DACGSGCCBCRGGCS1.7e-32.2e-6019854540.240794.51375.00-
Homo sapiensM1581_1.02(CIC)_(Mus_musculus)_(DBD_1.00)NNTGCTGACW2.3e-33.0e-6015649540.314873.51395.00-
Homo sapiensM6151_1.02ARNTBYRCGTGC2.6e-33.5e-609436490.2449-41.51405.00-
Homo sapiensM2289_1.02JUNDDRATGATGTMAT2.8e-33.7e-6017142430.3488-791385.00-
Homo sapiensM0211_1.02(MLXIP)_(Mus_musculus)_(DBD_0.82)BCACGTGK2.9e-33.8e-6027440.227380.51405.00-
Homo sapiensM6352_1.02MYCNCCACGTGS3.0e-34.1e-6018045460.4022-80.51405.00-
Homo sapiensM1890_1.02NFYAAGVSYKCTGATTGGTBSR3.1e-34.2e-603612160.3125-16.51355.00-
Homo sapiensM5660_1.02NFIATTGGCANNDTGCCAR3.2e-34.3e-6014732330.2121681375.00-
Homo sapiensM5662_1.02NFIBTTGGCAHNDTGCCAR3.2e-34.3e-6014732330.2121681375.00-
Homo sapiensM6171_1.02CEBPDRRTKDBGCAAT3.4e-34.6e-6017543440.1818-821395.00-
Homo sapiensM6348_1.02MTF1MGKGCCGTGYGCAAARS4.2e-35.7e-6019349490.2449911365.00-
Homo sapiensM6539_1.02ZBTB7BCGGVGRRGGGGMGSRGGSGGGH4.3e-35.8e-602017490.1633101.51335.00-
Homo sapiensM4527_1.02SMARCC2RRACTACAAYTCCCAGVAKGC4.8e-36.4e-6057200.2500-21345.00-
Homo sapiensM6549_1.02ZIC2KGGGTGGTC4.9e-36.6e-602919460.1522131405.00-
Homo sapiensM0212_1.02(TCFL5)_(Mus_musculus)_(DBD_1.00)NBCDCGHGVN5.1e-36.9e-6017044460.3913-80.51395.00-
Homo sapiensM6433_1.02PPARGGKKMMCTTTGACCYASWT6.3e-38.5e-6015046510.3333-60.51355.00-
Homo sapiensM5664_1.02NFIXTTGGCANNNNGCCAR6.3e-38.5e-6014333350.2000681375.00-
Homo sapiensM6144_1.02TFAP2BBCCCBCRGGC6.5e-38.8e-6020654540.240795.51395.00-
Homo sapiensM6172_1.02CEBPEVAKATTDCGHAA7.7e-31.0e-5016447500.200032.51385.00-
Homo sapiensM4604_1.02ZNF263RRGGAGGASGVVGRGGRGGRG8.5e-31.1e-5019954540.2222951345.00-
Homo sapiensM6389_1.02NR2C1VTGACCTCYBRSC9.4e-31.3e-5016750540.3704791385.00-
Homo sapiensM6379_1.02NKX3-2VRYTAAGTGGV9.5e-31.3e-5018552540.2037-871395.00-
Homo sapiensM5506_1.02HES7YGGCACGTGCCR1.2e-21.6e-50128160.18754.51385.00-
Homo sapiensM4522_1.02ELK4CCGGAAGYGS1.3e-21.8e-5014437410.146352.51395.00-
Homo sapiensM6377_1.02NKX2-8TTCAAGKRC1.4e-21.9e-5019551520.2308-921405.00-
Homo sapiensM6278_1.02HLTFKANKGCTGSMAM1.9e-22.6e-5015447530.245374.51385.00-
Homo sapiensM6550_1.02ZIC3BGGGTGGYC2.0e-22.7e-5021154540.3148-1011405.00-
Homo sapiensM5422_1.02ETV3ACCGGAAGTR2.0e-22.7e-50128170.17652.51395.00-
Homo sapiensM4428_1.02NR3C1RGVACAYTBTGTYC2.6e-23.6e-50129230.17391.51375.00-
Homo sapiensM6556_1.02ZNF350SGGCMMCAAABNHYTGCBBCCCST2.9e-24.0e-5086110.27273.51325.00-
Homo sapiensM6486_1.02SPZ1CGGCKGWWACMBYGGG3.3e-24.4e-5017050540.1481-83.51365.00-
Homo sapiensM5883_1.02TBX20TCACACSTTCACACCT3.9e-25.3e-5010233440.250045.51365.00-
Homo sapiensM6213_1.02ERGACCGGAARTSM4.3e-25.8e-5015138420.2857711395.00-
Homo sapiensM6358_1.02NEUROD1SGGCAGRTGKSC5.0e-26.7e-5089350.0857-0.51385.00-
Homo sapiensM6349_1.02MYBL2WYAACCKSBA5.0e-26.7e-5012428320.1875-58.51395.00-
Homo sapiensM5709_1.02PAX7WAATYRATTA5.7e-27.6e-506012140.142925.51395.00-
Homo sapiensM5974_1.02ZNF524GGGTTCRAGGGT5.8e-27.8e-5011830360.2778-54.51385.00-
Homo sapiensM5592_1.02KLF14ARGKGGGCGTGGYM6.4e-28.6e-5018045470.1489-88.51375.00-
Homo sapiensM0189_1.02(ID2)_(Mus_musculus)_(DBD_0.98)RCACGTGR7.4e-21.0e-4026440.227380.51405.00-
Homo sapiensM0610_1.02TET1NNYRCGYWN7.9e-21.1e-409531440.2500-421405.00-
Homo sapiensM4532_1.02MYCCCACGTGSYY8.3e-21.1e-4018244460.3478-81.51395.00-
Homo sapiensM6510_1.02TEFTGTTTATRTAAMTK8.4e-21.1e-408621270.1852-41.51375.00-
Homo sapiensM6374_1.02NKX2-1STCAAGKGCH8.5e-21.1e-4021654540.2222-91.51395.00-
Homo sapiensM6199_1.02EGR2DGVGTGGGCGG8.9e-21.2e-4021150500.18001001395.00-
Homo sapiensM6429_1.02POU6F1CATAAWTTATGCR9.2e-21.2e-4059990.2222-271385.00-
Homo sapiensM6360_1.02NFE2L2VRTGACTCAGCA1.0e-11.4e-406830540.1667-27.51385.00-
Homo sapiensM0422_1.02(ZIC5)_(Mus_musculus)_(DBD_0.99)SYRGGGGGTM1.2e-11.6e-4011640540.1852-52.51395.00-
Homo sapiensM6373_1.02NFYCYAGCCAATSAGVGS1.2e-11.6e-403615300.1333-15.51375.00-
Homo sapiensM5487_1.02GCM2BATGCGGGTR1.3e-11.8e-4019236360.3889-91.51395.00-
Homo sapiensM0398_1.02(ZSCAN10)_(Mus_musculus)_(DBD_0.82)NGKRAGTGCNN1.3e-11.8e-4021754540.2222-911395.00-
Homo sapiensM4698_1.02HNF4ABTGRMCTTTGVMCYB1.3e-11.8e-4021353530.2264931375.00-
Homo sapiensM6345_1.02MITFVKCACATGWY1.3e-11.8e-40810500.240072.51395.00-
Homo sapiensM5491_1.02GLIS2CDYYGCGGGGGGTC1.4e-11.9e-403414280.1071-93.51375.00-
Homo sapiensM6537_1.02YBX1BSKGATTSSCY1.4e-11.9e-4019350520.2692-851395.00-
Homo sapiensM6316_1.02TCF4VCAGGTGCD1.4e-11.9e-4037520.2308-1231405.00-
Homo sapiensM0937_1.02(SIX6)_(Mus_musculus)_(DBD_1.00)HKATMYN1.6e-12.1e-4017938390.3077-851415.00-
Homo sapiensM1016_1.02(SIX3)_(Mus_musculus)_(DBD_1.00)NNKATMY1.6e-12.2e-4017737380.3947-841415.00-
Homo sapiensM6338_1.02NR3C2YMCHWCAACCWGKHCTD1.7e-12.3e-405116260.1923-111365.00-
Homo sapiensM2264_1.02(ATOH1)_(Mus_musculus)_(DBD_1.00)RCCAKCTG1.7e-12.3e-4016630310.1290-20.51405.00-
Homo sapiensM5636_1.02MSCAACAGCTGTT1.8e-12.5e-4024130.2308-122.51395.00-
Homo sapiensM0608_1.02MLLNNNRSCGNDN3.0e-14.1e-4011238530.2075-40.51395.00-
Homo sapiensM6542_1.02ZBTB6VGRTGATRGAGCC3.1e-14.2e-4021752520.3077681385.00-
Homo sapiensM6257_1.02GATA5WVANWGATAABTYRRHK3.4e-14.6e-405515230.1304221365.00-
Homo sapiensM6321_1.02KLF15RSMKGGGAGDKGGGGSS3.7e-15.0e-4011338520.1346541365.00-
Homo sapiensM4636_1.02THAP1YTGCCCDBANYMAAGATGGCG4.2e-15.7e-4015527280.2500-721345.00-
Homo sapiensM0443_1.02(KLF12)_(Mus_musculus)_(DBD_1.00)DGGGYGKGKY4.4e-15.9e-403219540.148114.51395.00-
Homo sapiensM6155_1.02ATF6GBGSTGACGTGG4.9e-16.6e-4019246480.312575.51385.00-
Homo sapiensM6553_1.02ZNF219GDGGGGGGYGGA5.0e-16.7e-4021053540.2963-90.51385.00-
Homo sapiensM1919_1.02YY1CAARATGGCBGC5.2e-17.0e-4016445510.1765-38.51385.00-
Homo sapiensM5583_1.02ISL2YTAAKTGC5.2e-17.0e-4022453530.4151107.51405.00-
Homo sapiensM0198_1.02(SOHLH2)_(Mus_musculus)_(DBD_0.84)NRYNCGTGCN5.6e-17.5e-4017041450.3111-80.51395.00-
Homo sapiensM4427_1.02CTCFNYGGCCASCAGRKGGCRSYVB5.7e-17.7e-4014323240.1667-541345.00-
Homo sapiensM2065_1.02ESR2RGGKCANBSTGACCT6.3e-18.5e-4014543520.2115-581375.00-
Homo sapiensM1030_1.02(NKX2-3)_(Mus_musculus)_(DBD_1.00)NVYACTTVD6.4e-18.6e-4022554540.38891081405.00-
Homo sapiensM4478_1.02STAT3SHBVTSAYTTCCRGKAAAYG8.4e-11.1e-3010212120.2500-41.51345.00-
Homo sapiensM6376_1.02NKX2-5TYAAGTG8.9e-11.2e-3022349490.36731071415.00-
Homo sapiensM4438_1.02ESRRARGGTCANKSTGACCY1.01.4e-3014341500.3200671375.00-
Homo sapiensM0609_1.02DNMT1NNCCGMNNNN1.21.6e-303018530.1887135.51395.00-
Homo sapiensM6207_1.02ELK1RCCGGAAGT1.21.6e-30118290.103421405.00-
Homo sapiensM5704_1.02PAX3TAATYRATTA1.21.6e-305410130.153825.51395.00-
Homo sapiensM6205_1.02ELF3GGSAAACAGGAARY1.72.3e-3015018180.1111-50.51375.00-
Homo sapiensM6468_1.02SNAI1SCAGGTGK1.82.4e-3089530.0943-122.51405.00-
Homo sapiensM6187_1.02DDIT3GGGGATTGCABBB1.92.6e-3013742540.1852631385.00-
Homo sapiensM5300_1.02BARX1TAATBGNTWTTTAATBG1.92.6e-307112150.1333-341365.00-
Homo sapiensM6222_1.02ETV4SAGGAAGY2.23.0e-3014842520.269271.51405.00-
Homo sapiensM5291_1.02ARXYTAATTNRATTAN2.43.2e-306915220.1818271385.00-
Homo sapiensM5689_1.02NRLDWWNTGCTGAC2.53.4e-3014943530.3019721395.00-
Homo sapiensM2319_1.02TCF7L2KBYCTTTGAWSTBN2.53.4e-306825470.170230.51375.00-
Homo sapiensM6211_1.02EOMESCGGGGATACGAAAT2.83.8e-3015418180.277871.51375.00-
Homo sapiensM5882_1.02TBX19DTTMRCACVTAGGTGTGAAW3.04.0e-3038790.333313.51345.00-
Homo sapiensM5593_1.02KLF16GGGGGCGTGKC3.14.2e-3011937520.1731561395.00-
Homo sapiensM5711_1.02PAX9KKCASTCAWGCGTGACS3.24.3e-3015322230.2174711365.00-
Homo sapiensM6191_1.02E2F2GGCGCGAAAC3.24.4e-3018044480.1667-43.51395.00-
Homo sapiensM6548_1.02ZIC1KGGGWGGTV3.54.7e-3021152540.2778-1011405.00-
Homo sapiensM6274_1.02HIC1GGGKTGCCC3.85.1e-3097300.1333-1031405.00-
Homo sapiensM5430_1.02FIGLAWMCACCTGKW4.56.1e-3025540.2963122.51395.00-
Homo sapiensM4471_1.02PAX5BCAGYSRAGCGTGAC5.27.0e-3022954540.1296-711375.00-
Homo sapiensM1950_1.02ZNF354CGTGGAK6.48.6e-3018849540.1111-86.51415.00-
Homo sapiensM5209_1.02(SP5)_(Drosophila_melanogaster)_(DBD_0.93)GKGGGCGKRKC6.79.0e-3018549540.1852561395.00-
Homo sapiensM0405_1.02(KLF7)_(Mus_musculus)_(DBD_1.00)DGGGCGKGGY7.19.6e-303217540.1296-136.51395.00-
Homo sapiensM6432_1.02PPARDTGACCTTTVNCCTR8.71.2e-2022243430.1395105.51375.00-
Homo sapiensM6535_1.02WT1GMGGGGGCGKGGG9.51.3e-2019549530.2264931385.00-
Homo sapiensM5627_1.02MESP1NVCAGGTGYD9.71.3e-2088510.1961122.51395.00-

Matching sequences (out of 54)

Union: 53 sequences (98%).
Intersection: 46 sequences (85%).

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Input Files

Sequences

DatabaseSourceSequence Count
Repeat.AluYc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYc.MemeChipResults/Repeat.AluYc.fa 54

Motifs

DatabaseSourceMotif Count
meme/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HumanGenome/Repeats/RepeatNames/Repeat.AluYc.MemeChipResults/meme_out/meme.xml9
Homo sapiens/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme733
CentriMo version
4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700)
Command line summary