Information for 7-SRTSACGTSA (Motif 9)


Reverse Opposite:

p-value:1e-26
log p-value:-6.210e+01
Information Content per bp:1.721
Number of Target Sequences with motif379.0
Percentage of Target Sequences with motif11.71%
Number of Background Sequences with motif264.2
Percentage of Background Sequences with motif5.12%
Average Position of motif in Targets135.6 +/- 82.4bp
Average Position of motif in Background145.9 +/- 156.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TGA7/MA1070.1/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:SRTSACGTSA
GGTGACGTCA

TGA6/MA1069.1/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:SRTSACGTSA
GATGACGTCA

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-SRTSACGTSA-
CGGTGACGTCAC

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.91
Offset:0
Orientation:forward strand
Alignment:SRTSACGTSA
GATGACGTCA

CST6/MA0286.1/Jaspar

Match Rank:5
Score:0.90
Offset:1
Orientation:forward strand
Alignment:SRTSACGTSA
-ATGACGTAA

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.90
Offset:2
Orientation:forward strand
Alignment:SRTSACGTSA
--TGACGTCA

STF1(bZIP)/Glycine max/AthaMap

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:SRTSACGTSA--
AATGACGTCATT

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--SRTSACGTSA----
NCGATGACGTCATCGN

TGA1/MA0588.1/Jaspar

Match Rank:9
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-SRTSACGTSA
TGGTGACGTAA

BZIP60/MA0967.1/Jaspar

Match Rank:10
Score:0.89
Offset:2
Orientation:forward strand
Alignment:SRTSACGTSA
--TGACGTCA