Information for 8-TACGGCCT (Motif 8)


Reverse Opposite:

p-value:1e-34
log p-value:-7.896e+01
Information Content per bp:1.597
Number of Target Sequences with motif1321.0
Percentage of Target Sequences with motif40.82%
Number of Background Sequences with motif1434.2
Percentage of Background Sequences with motif27.79%
Average Position of motif in Targets141.6 +/- 86.6bp
Average Position of motif in Background141.8 +/- 126.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL5/MA1059.1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TACGGCCT
TTGTACGGC--

SPL12/MA1057.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TACGGCCT
TGTACGGT--

SPL4/MA1058.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TACGGCCT
CGTACGGTT-

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TACGGCCT
GGTACGG---

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.73
Offset:-8
Orientation:reverse strand
Alignment:--------TACGGCCT---
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:6
Score:0.73
Offset:-8
Orientation:reverse strand
Alignment:--------TACGGCCT---
CCCTNCTGTACGGACGNNA

SPL7/MA1060.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TACGGCCT
CGTACGGC--

SPL11/MA1056.1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TACGGCCT
TATCGTACGGAT-

SKN7/MA0381.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TACGGCCT
-NTGGCC-

RDS1(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TACGGCCT
--CGGCCG