Information for 6-CTCTATGGTB (Motif 7)


Reverse Opposite:

p-value:1e-39
log p-value:-9.001e+01
Information Content per bp:1.723
Number of Target Sequences with motif160.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets130.1 +/- 77.7bp
Average Position of motif in Background147.1 +/- 75.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTCTATGGTB-
GTCTGTGGTTT

MET28/MA0332.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCTATGGTB
--CTGTGG--

MET28(MacIsaac)/Yeast

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCTATGGTB
--CTGTGG--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTCTATGGTB-
-GCTGTGGTTT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCTATGGTB--
NNHTGTGGTTWN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTCTATGGTB--
--CTGTGGTTTN

cad/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCTATGGTB
TTTTTATGG--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCTATGGTB-
-NNTGTGGTTT

cad/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCTATGGTB
-TTTATG---

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCTATGGTB
GGCTCYAKCAYC