Information for 25-CWCWCACACWCW (Motif 32)


Reverse Opposite:

p-value:1e-1
log p-value:-3.331e+00
Information Content per bp:1.807
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif106.6
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets153.2 +/- 86.0bp
Average Position of motif in Background250.1 +/- 260.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

daf-12/MA0538.1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----CWCWCACACWCW
NACGCACACACACAC-

SeqBias: CA-repeat

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CWCWCACACWCW
--CACACACACA

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CWCWCACACWCW
CTCTCTCTCY--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CWCWCACACWCW
--CRCCCACGCA

Trl/dmmpmm(Down)/fly

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CWCWCACACWCW
GCTCTCTCTCTC-

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CWCWCACACWCW
AGCGGCACACACGCAA-

SeqBias: GA-repeat

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CWCWCACACWCW
-TCTCTCTCTC-

RAP1(MacIsaac)/Yeast

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CWCWCACACWCW
ACACCCATACAC-

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CWCWCACACWCW
TTGCTCTCTCTCTC-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CWCWCACACWCW
YCCGCCCACGCN