Information for 25-CTTAACGTCG (Motif 31)


Reverse Opposite:

p-value:1e-4
log p-value:-1.065e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets169.5 +/- 91.8bp
Average Position of motif in Background101.4 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CG11617/MA0173.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTAACGTCG
-TTAACAT--

TGA1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTAACGTCG----
--TAACGTCANCAN

DAL80/MA0289.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTAACGTCG
CTTATCG---

bap/MA0211.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTAACGTCG
CACTTAA-----

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTAACGTCG
--TGACGTCA

CST6/MA0286.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTAACGTCG-
--TTACGTCAT

TGA1A/MA0129.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTAACGTCG
---TACGTCA

TGA6/MA1069.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTAACGTCG--
--TGACGTCATN

Unknown5/Drosophila-Promoters/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTAACGTCG
BSTTATCAGC-

SKO1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTAACGTCG
--TGACGT--