Information for 22-AGTCCTCGCGCG (Motif 30)


Reverse Opposite:

p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets159.0 +/- 94.1bp
Average Position of motif in Background159.5 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:AGTCCTCGCGCG--
------CGCGCGCG

SUT1?/SacCer-Promoters/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGTCCTCGCGCG
---CCCCGCGC-

RSC3/MA0374.1/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGTCCTCGCGCG-
------CGCGCGG

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTCCTCGCGCG----
-GTTCTCGCGAGANCC

XBP1(MacIsaac)/Yeast

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGTCCTCGCGCG
--TCCTCGAG--

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCTCGCGCG--
NAGNTCTCGCGAGAN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTCGCGCG
CNGTCCTCCC---

GFX(?)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTCCTCGCGCG-
-ATTCTCGCGAGA

SeqBias: CG-repeat

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGTCCTCGCGCG--
----CGCGCGCGCG

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AGTCCTCGCGCG-
-----TAGCGCGC