Information for 3-TTCCCAGAATGC (Motif 3)


Reverse Opposite:

p-value:1e-60
log p-value:-1.393e+02
Information Content per bp:1.719
Number of Target Sequences with motif279.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif65.7
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets144.4 +/- 87.5bp
Average Position of motif in Background167.2 +/- 87.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGAATGC-
ATTTCCCAGVAKSCY

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TTCCCAGAATGC----
TACCCACAATGCATTG

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGAATGC
TTTCCCAGAAN--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGAATGC
HTTTCCCASG----

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:5
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------TTCCCAGAATGC
AACTACAATTCCCAGAATGC

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGAATGC
ATTTCCAAGAA---

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGAATGC
TGCCCAGNHW--

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGAATGC
TTTCCTGGAAA--

Su(H)/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGAATGC
CTCCCAC-----

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCCCAGAATGC--
CCACACAGCAGGAGA