Information for 21-CCGGCGTCCCCA (Motif 29)


Reverse Opposite:

p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.530
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets138.5 +/- 81.9bp
Average Position of motif in Background153.0 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCGTCCCCA-
TGCCTGCGYCMCCTT

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:CCGGCGTCCCCA
------TCCCCA

Mad/dmmpmm(Down)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGCGTCCCCA
CTGGCGTCGCG-

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCGGCGTCCCCA-
-CAACGTCCGCGG

GCR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCGGCGTCCCCA
--GGCTTCCAC-

abi4/MA0123.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGGCGTCCCCA
-CGGTGCCCCC-

ERF6/MA1006.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGGCGTCCCCA
CTGCCGGCGT-----

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGGCGTCCCCA
CCGGCGCC----

ERF105/MA1000.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGGCGTCCCCA
TGCCGGCG------

ADR1/MA0268.1/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCGGCGTCCCCA-
------ACCCCAC