Information for 18-AGTCCTCCGCTC (Motif 26)


Reverse Opposite:

p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.514
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets140.8 +/- 85.4bp
Average Position of motif in Background134.5 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHA4/MA0283.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
---TCTCCGCC-

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTCCGCTC
CNGTCCTCCC---

SUT1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGTCCTCCGCTC
----CCCCGCGC

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGTCCTCCGCTC--
----CACCGCCCCC

ADR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
---ACCCCN---

ADR1(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
---ACCCCN---

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
----CCCCGCG-

CRF2/MA0975.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGTCCTCCGCTC
---CCGCCGCC-

SUT1(MacIsaac)/Yeast

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
----CCCCGCG-

RGT1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTCCTCCGCTC
--TNNTCCG---