Information for 24-TTGGCTTC (Motif 24)


Reverse Opposite:

p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.933
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif89.9
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets140.5 +/- 89.1bp
Average Position of motif in Background146.5 +/- 98.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TTGGCTTC
--GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TTGGCTTC
--GGTTTC

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TTGGCTTC-
---GCTTCC

GCR1/MA0304.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTGGCTTC--
--GGCTTCCA

GCR2(MacIsaac)/Yeast

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TTGGCTTC--
---GCTTCCN

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGGCTTC
TTGGCA--

GCR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTGGCTTC---
--GGCTTCCAC

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTTC
NTTGGCANN

GCR1(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTGGCTTC--
-GGGCTTCCA

GCR2/MA0305.1/Jaspar

Match Rank:10
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTGGCTTC--
---GCTTCCT