Information for 16-GGTTGGGCGCCG (Motif 23)


Reverse Opposite:

p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.718
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets137.3 +/- 78.7bp
Average Position of motif in Background233.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

brk/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.72
Offset:5
Orientation:forward strand
Alignment:GGTTGGGCGCCG
-----GGCGCCA

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGGCGCCG----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGGCGCCG----
NNNNTTGGCGCCGANNN

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GGTTGGGCGCCG-
-----GGCGCCAG

Os05g0497200/MA1034.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGTTGGGCGCCG
----CGGCGGCG

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGTTGGGCGCCG--
--TTTGGCGCCAAA

RAP2-3/MA1051.1/Jaspar

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GGTTGGGCGCCG-
-----GGCGGCGC

ERF109/MA1053.1/Jaspar

Match Rank:8
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGTTGGGCGCCG-
-----GGCGGCGC

RAP2-6/MA1052.1/Jaspar

Match Rank:9
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGTTGGGCGCCG-
-----GGCGGCGC

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGTTGGGCGCCG
-----GGCGGCG