Information for 23-GCGCTAAA (Motif 22)


Reverse Opposite:

p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.541
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif100.9
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets143.5 +/- 91.0bp
Average Position of motif in Background145.1 +/- 108.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GCGCTAAA-
TTCGCGCGAAAA

efl-1/MA0541.1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GCGCTAAA--
CGCGCGCGCGAAATT

SWI4(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCGCTAAA-
ACGCGAAAA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAAA-
GGCGGGAAAH

STB1(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCGCTAAA-
-CGCGAAAA

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAAA
GACGCGAAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTAAA--
TGGCGGGAAAHB

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCGCTAAA
ACGCGAAA

YPR196W/MA0437.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGCTAAA--
-CGGAGAAAT

caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAAA-
GGYCATAAAW