Information for 15-GTCGGGAGCGGA (Motif 19)


Reverse Opposite:

p-value:1e-12
log p-value:-2.967e+01
Information Content per bp:1.733
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets131.2 +/- 80.7bp
Average Position of motif in Background128.0 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTCGGGAGCGGA
---GGGGGGGG-

IXR1(MacIsaac)/Yeast

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTCGGGAGCGGA-
AAGCCGGAAGCGGGG

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCGGGAGCGGA--
GGCGGGGGCGGGGG

btd/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCGGGAGCGGA-
---GGGGGCGGAT

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTCGGGAGCGGA
---CGGAGC---

IXR1/MA0323.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCGGGAGCGGA-
AAGCCGGAAGCGGGG

LEU3(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTCGGGAGCGGA
-CCGGTACCGG-

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCGGGAGCGGA
--GGGGNGGGGC

btd/MA0443.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCGGGAGCGGA
--AGGGGGCGGA

LEU3/LEU3_SM/47-LEU3(Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCGGGAGCGGA
-CCGGTACCGG-