Information for 17-CCACCTGGTG (Motif 18)


Reverse Opposite:

p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.661
Number of Target Sequences with motif380.0
Percentage of Target Sequences with motif11.74%
Number of Background Sequences with motif359.9
Percentage of Background Sequences with motif6.98%
Average Position of motif in Targets146.4 +/- 85.5bp
Average Position of motif in Background140.3 +/- 121.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGGTG
ACCACCTGTT-

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.77
Offset:-8
Orientation:forward strand
Alignment:--------CCACCTGGTG--
CNNBRGCGCCCCCTGSTGGC

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----CCACCTGGTG----
TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------CCACCTGGTG----
ANAGTGCCACCTGGTGGCCA

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCACCTGGTG---
ANCCACCTGTTGCNC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGGTG
NNCACCTGNN-

sna/MA0086.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CCACCTGGTG
-CACCTG---

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCACCTGGTG---
CCACCTGTTGCAT

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGGTG
AACACCTGCT-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CCACCTGGTG--
NNTNCGCACCTGTNGAN