Information for 14-GCGCCGTCTA (Motif 16)


Reverse Opposite:

p-value:1e-15
log p-value:-3.567e+01
Information Content per bp:1.826
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets158.4 +/- 85.0bp
Average Position of motif in Background110.3 +/- 105.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP2-10/MA0980.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCC--

CTCF/MA0531.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCGTCTA----
GGCGCCATCTAGCGG

ERF109/MA1053.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCC--

CRF4/MA0976.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCC--

RAP2-6/MA1052.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCC--

RAP2-3/MA1051.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCC--

ERF11/MA1001.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
GCGCCGCCAT

ERF4/MA0992.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCGCCGTCTA
CCGCCGCC--

ERF8/MA0994.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCGCCGTCTA-
-CGCCGCCATT

ERF112/MA1002.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGCCGTCTA
GCCGCCGCCA-