Information for 13-CGGGCAAGCK (Motif 15)


Reverse Opposite:

p-value:1e-15
log p-value:-3.612e+01
Information Content per bp:1.706
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets134.9 +/- 95.4bp
Average Position of motif in Background205.8 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAGCK
CTCGGTCAA---

STB2(MacIsaac)/Yeast

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGGCAAGCK
CGGGTAAN--

ZAP1/MA0589.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGGGCAAGCK
GGCTCGGTCAA---

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGCAAGCK
CGGGTAA---

WRKY63/MA1092.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGCAAGCK
CGGTCAAC--

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAGCK
TNNGGGCAG---

WRKY25/MA1081.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGGCAAGCK
CGGTCAAC--

SOK2(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGGCAAGCK
GCAGGCAA---

REB1(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCAAGCK
CCGGGTAA---

WRKY60/MA1090.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGGCAAGCK
CCGGTCAACGT