Information for 11-CTTCGCGGCA (Motif 14)


Reverse Opposite:

p-value:1e-16
log p-value:-3.749e+01
Information Content per bp:1.631
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif5.81%
Number of Background Sequences with motif116.8
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets146.8 +/- 90.0bp
Average Position of motif in Background161.6 +/- 122.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP1(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTTCGCGGCA-
---TGCGGCGC

STP1/MA0394.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTTCGCGGCA-
---TGCGGCGC

ERF069/MA0997.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTCGCGGCA-
--NGGCGGCGN

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTTCGCGGCA
NNGCNCTGCGCGGC-

STP1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTTCGCGGCA
ACGGCNNNACGGC-

PDR1/MA0352.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTCGCGGCA
-TCCGCGGA-

ERF11/MA1001.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTCGCGGCA-
-NTGNCGGCGN

UGA3/MA0410.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTTCGCGGCA
--CGGCGGGA

IME1/MA0320.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTCGCGGCA
CTCGGCGG--

ERF7/MA0993.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTCGCGGCA
NNTGGCGGCG