Information for 19-GCGAGCTA (Motif 13)


Reverse Opposite:

p-value:1e-17
log p-value:-4.024e+01
Information Content per bp:1.923
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif45.9
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets129.0 +/- 95.5bp
Average Position of motif in Background173.2 +/- 108.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCGAGCTA
GCGCGCTA

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGAGCTA
GGCGCGCT-

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCGAGCTA-
ATAAAGGCGCGCGAT

TEA1/MA0405.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGAGCTA
GCGGACAT

STP3/MA0396.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGAGCTA--
-TGCGCTAGC

STP4/MA0397.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGAGCTA--
-TGCGCTATC

MAC1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGAGCTA-
--GAGCAAA

MAC1/MA0326.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGAGCTA-
-TGAGCAAA

ROX1(MacIsaac)/Yeast

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGAGCTA--
GCGGGCTTNT

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCGAGCTA-
ATAAGGGCGCGCGAT