Information for 10-CGCATGCGCA (Motif 12)


Reverse Opposite:

p-value:1e-20
log p-value:-4.693e+01
Information Content per bp:1.670
Number of Target Sequences with motif533.0
Percentage of Target Sequences with motif16.47%
Number of Background Sequences with motif490.6
Percentage of Background Sequences with motif9.51%
Average Position of motif in Targets145.7 +/- 86.5bp
Average Position of motif in Background133.0 +/- 122.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC

FUS3/MA0565.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
CGCATGCGC-

LEC2/MA0581.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA-
TGCATGCACAT

ABI3/MA0564.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
CTGCATGCA--

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGCATGCGCA
TGCATGCA--

Med/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGCATGCGCA--
-GCAGCCGCAGT

SeqBias: CG-repeat

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
CGCGCGCGCG

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
CACATGC---