Information for 1-GCCGGAAGYN (Motif 1)


Reverse Opposite:

p-value:1e-172
log p-value:-3.977e+02
Information Content per bp:1.632
Number of Target Sequences with motif1754.0
Percentage of Target Sequences with motif54.20%
Number of Background Sequences with motif1237.9
Percentage of Background Sequences with motif23.99%
Average Position of motif in Targets138.1 +/- 80.6bp
Average Position of motif in Background133.9 +/- 128.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GCCGGAAGYN
RCCGGAAGTD

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GCCGGAAGYN
RCCGGAARYN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GCCGGAAGYN
DCCGGAARYN

Eip74EF/MA0026.1/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GCCGGAAGYN
-CCGGAAG--

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GCCGGAAGYN-
NCCGGAAGTGG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GCCGGAAGYN
ANCCGGAAGT-

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.93
Offset:1
Orientation:forward strand
Alignment:GCCGGAAGYN--
-CCGGAAGTGGC

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GCCGGAAGYN
ACCGGAAG--

Ets21C/MA0916.1/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:forward strand
Alignment:GCCGGAAGYN
-CCGGAAGT-

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GCCGGAAGYN
ACCGGAAGTG