Information for 1-CYCSCYCCKCCC (Motif 4)


Reverse Opposite:

p-value:1e0
log p-value:-6.731e-01
Information Content per bp:1.787
Number of Target Sequences with motif1938.0
Percentage of Target Sequences with motif59.89%
Number of Background Sequences with motif1938.0
Percentage of Background Sequences with motif59.89%
Average Position of motif in Targets141.1 +/- 89.0bp
Average Position of motif in Background141.1 +/- 89.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.59
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:CYCSCYCCKCCC-
---GCCCCGCCCC

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.79
Offset:3
Orientation:forward strand
Alignment:CYCSCYCCKCCC--
---GCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CYCSCYCCKCCC---
-NAGCCCCGCCCCCN

SeqBias: polyC-repeat

Match Rank:4
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CYCSCYCCKCCC
--CCCCCCCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:CYCSCYCCKCCC
----CCCCCCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CYCSCYCCKCCC--
TCCCCCCCCCCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CYCSCYCCKCCC--
--GGCCCCGCCCCC

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CYCSCYCCKCCC-
---GCCCCACCCA

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:9
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CYCSCYCCKCCC--
----CACCGCCCCC

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CYCSCYCCKCCC----
CTATCCCCGCCCTATT