Information for 3-HCGCCTAC (Motif 3)


Reverse Opposite:

p-value:1e0
log p-value:-6.734e-01
Information Content per bp:1.703
Number of Target Sequences with motif1813.0
Percentage of Target Sequences with motif56.03%
Number of Background Sequences with motif1813.0
Percentage of Background Sequences with motif56.03%
Average Position of motif in Targets142.4 +/- 85.6bp
Average Position of motif in Background142.4 +/- 85.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

btd/MA0443.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-HCGCCTAC-
TCCGCCCCCT

btd/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--HCGCCTAC
ATCCGCCCCC

ERF8/MA0994.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:HCGCCTAC---
-CGCCGCCATT

ERF008/MA0979.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:HCGCCTAC-
-CGCCGCCC

ERF112/MA1002.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-HCGCCTAC-
GCCGCCGCCA

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--HCGCCTAC
CGCCGCC---

ERF4/MA0992.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:HCGCCTAC
CCGCCGCC

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-HCGCCTAC---
YCCGCCCACGCN

ERF094/MA1049.1/Jaspar

Match Rank:9
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--HCGCCTAC
CGCCGCCG--

ERF3/MA1005.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:HCGCCTAC-
-CGCCGCCA