Information for 1-CCGGCCCT (Motif 2)


Reverse Opposite:

p-value:1e0
log p-value:-6.735e-01
Information Content per bp:1.530
Number of Target Sequences with motif1614.0
Percentage of Target Sequences with motif49.88%
Number of Background Sequences with motif1614.0
Percentage of Background Sequences with motif49.88%
Average Position of motif in Targets140.9 +/- 86.3bp
Average Position of motif in Background140.9 +/- 86.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CCGGCCCT-
CCGCCCCTT

SKN7(MacIsaac)/Yeast

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCGGCCCT
TCCGGGCC-

brk/dmmpmm(Down)/fly

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCGGCCCT
CCGGCGCT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CCGGCCCT----
ATCCCCGCCCCTAAAA

SKN7/MA0381.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCGGCCCT
NTGGCC--

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCCCT----
TCACCCCGCCCCAAATT

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCGGCCCT
GCCNGGGCC-

ERF6/MA1006.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGGCCCT
CTGCCGGCGT-

CAT8/MA0280.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCCCT
NTCCGG----

RDS1/MA0361.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGGCCCT
NCGGCCG-