Invoking: getsize /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.032084 Invoking: fasta-most -min 50 < /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.064408 Invoking: fasta-center -dna -len 100 < /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.098538 Invoking: fasta-shuffle-letters /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.013079 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background Finished invoke: name: bg status: 0 time: 0.006454 Invoking: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 1948.86393 Invoking: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled Finished invoke: name: dreme status: 0 time: 33.433029 Invoking: centrimo -seqlen 500 -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/centrimo_out -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: centrimo status: 0 time: 7.759281 Invoking: tomtom -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: meme_tomtom status: 0 time: 12.894436 Invoking: tomtom -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: dreme_tomtom status: 0 time: 1.863221 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/combined.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/combined.meme 1> /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/motif_alignment.txt Finished invoke: name: align status: 0 time: 5.036717 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_1 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary CYCCKCCCCBYCCCCYCCCYYC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo1 status: 0 time: 67.874817 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_2 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary TGGAATSGAATGGAATC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo2 status: 0 time: 5.603633 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_3 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary ACGCCCH /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo3 status: 0 time: 64.389346 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_4 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M2273_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo4 status: 0 time: 104.765775 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_5 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6150_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo5 status: 0 time: 78.860329 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_6 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary ATCATCRAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo6 status: 0 time: 6.713171 Invoking: spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_7 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M4612_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme Finished invoke: name: spamo7 status: 0 time: 25.475166 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif CYCCKCCCCBYCCCCYCCCYYC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo1 status: 0 time: 0.411984 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_2 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif TGGAATSGAATGGAATC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo2 status: 0 time: 0.315725 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_3 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif ACGCCCH /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo3 status: 0 time: 0.137775 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_4 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M2273_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo4 status: 0 time: 0.437019 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6150_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo5 status: 0 time: 0.351706 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif ATCATCRAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo6 status: 0 time: 0.382849 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_7 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4612_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa Finished invoke: name: fimo7 status: 0 time: 0.459269 Writing output Invoking: meme-chip_html_to_tsv /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme-chip.html /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/KLF15/out/peak/idr/optimal_set/KLF15_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/summary.tsv Finished invoke: name: summary status: 0 time: 0.511361 Done