Invoking:
  getsize /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.076948
Invoking:
  fasta-most -min 50 < /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.106976
Invoking:
  fasta-center -dna -len 100 < /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa 1> /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.165729
Invoking:
  fasta-shuffle-letters /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.114563
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background
Finished invoke:
  name: bg  status: 0  time: 0.072496
Invoking:
  meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 2722.153688
Invoking:
  dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 20.916466
Invoking:
  centrimo -seqlen 500 -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/centrimo_out -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: centrimo  status: 0  time: 7.592626
Invoking:
  tomtom -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: meme_tomtom  status: 0  time: 46.118937
Invoking:
  tomtom -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: dreme_tomtom  status: 0  time: 1.477419
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/combined.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/combined.meme 1> /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 4.791655
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_1 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary RGCGCCMYCTGSYGGC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo1  status: 0  time: 128.171039
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_2 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary GGSGGCGCTGYG /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo2  status: 0  time: 18.540985
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_3 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6527_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo3  status: 0  time: 96.080949
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_4 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M4536_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo4  status: 0  time: 68.205023
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_5 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6326_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo5  status: 0  time: 95.887753
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_6 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary CCACM /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo6  status: 0  time: 48.11382
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_7 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6144_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo7  status: 0  time: 103.878019
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_8 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary GTGCGCMYGCGC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo8  status: 0  time: 34.98365
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_9 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M0432_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo9  status: 0  time: 1.759879
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_10 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M1359_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo10  status: 0  time: 17.490599
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_11 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M0405_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo11  status: 0  time: 83.084767
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_12 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary DGRAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo12  status: 0  time: 131.122522
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_13 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6325_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo13  status: 0  time: 59.602308
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_14 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6191_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo14  status: 0  time: 20.3606
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_15 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6483_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo15  status: 0  time: 23.506558
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_16 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6201_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo16  status: 0  time: 87.208097
Invoking:
  spamo -verbosity 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/spamo_out_17 -bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -primary M6337_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme
Finished invoke:
  name: spamo17  status: 0  time: 46.341945
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif RGCGCCMYCTGSYGGC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.873299
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_2 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif GGSGGCGCTGYG /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.837744
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_3 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6527_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.800984
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_4 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4536_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.823355
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6326_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo5  status: 0  time: 1.026588
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif CCACM /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.549845
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_7 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6144_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.911806
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_8 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif GTGCGCMYGCGC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.853052
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_9 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M0432_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.909706
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_10 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M1359_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.875666
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_11 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M0405_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.865286
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_12 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif DGRAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.51664
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6325_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.947527
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_14 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6191_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo14  status: 0  time: 0.79053
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_15 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6483_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo15  status: 0  time: 0.826838
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_16 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6201_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo16  status: 0  time: 0.902886
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_17 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6337_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Finished invoke:
  name: fimo17  status: 0  time: 1.00215
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme-chip.html /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/HughesZnfData/CTCF/out/peak/idr/optimal_set/CTCF_ppr.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.680042
Done