# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 YTTYATTGACTCACWB MEME-1 YTTYATTGACTCACWB 5.1e-057 6.8e-060 -136.24 0.0 143 485 357 562 0.29485 2.8e-062 242 1 CACATGGCTGGGGAGGCCTC MEME-2 CACATGGCTGGGGAGGCCTC 1.1e-008 1.5e-011 -24.95 0.0 103 481 28 34 0.21414 6.1e-014 240 1 AAKGAGGAGCAAAGKCAYRTCTTACATGGYGGCAGGCAAGAGAG MEME-3 AAKGAGGAGCAAAGKCAYRTCTTACATGGYGGCAGGCAAGAGAG 7.5e-002 1.0e-004 -9.19 0.0 59 457 12 19 0.12910 4.5e-007 228 2 GKGAGK DREME-1 GTGAGT 1.5e-014 2.0e-017 -38.45 0.0 155 495 258 508 0.31313 8.1e-020 247 2 HATAAA DREME-2 HATAAA 7.5e0000 1.0e-002 -4.60 0.0 167 495 208 492 0.33737 4.1e-005 247 2 GTAAAYA DREME-3 GTAAACA 5.8e-005 7.8e-008 -16.36 0.0 164 494 81 137 0.33198 3.2e-010 246 2 CATGGCK DREME-7 CATGGCT 1.1e-002 1.4e-005 -11.16 0.0 108 494 41 83 0.21862 5.8e-008 246 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 8.6e-005 1.2e-007 -15.97 0.0 221 491 317 545 0.45010 4.7e-010 245 3 M0415_1.02 (KLF9)_(Mus_musculus)_(DBD_1.00) VTAACGGN 2.4e0000 3.3e-003 -5.73 0.0 291 493 333 487 0.59026 1.3e-005 246 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 8.9e0000 1.2e-002 -4.43 0.0 31 491 62 581 0.06314 4.9e-005 245 3 M0718_1.02 FOXK1 DNRTMAACAH 4.4e-009 5.9e-012 -25.85 0.0 145 491 259 583 0.29532 2.4e-014 245 3 M0719_1.02 FOXG1 RTAAACAW 3.6e-005 4.8e-008 -16.85 0.0 131 493 213 546 0.26572 2.0e-010 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 1.0e-003 1.4e-006 -13.48 0.0 105 489 184 580 0.21472 5.7e-009 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 8.7e-008 1.2e-010 -22.87 0.0 147 493 257 585 0.29817 4.7e-013 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 4.2e-006 5.7e-009 -18.99 0.0 133 491 233 588 0.27088 2.3e-011 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 2.3e-005 3.1e-008 -17.30 0.0 131 491 228 588 0.26680 1.3e-010 245 3 M0756_1.02 (FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) NNHMACANN 2.3e-002 3.0e-005 -10.40 0.0 142 492 205 520 0.28862 1.2e-007 245 3 M0892_1.02 EMX1 NYTAATKAVN 1.0e-001 1.4e-004 -8.87 0.0 145 491 215 547 0.29532 5.7e-007 245 3 M0893_1.02 ZFHX2 NNTAATTANN 6.9e0000 9.3e-003 -4.68 0.0 197 491 244 497 0.40122 3.8e-005 245 3 M0894_1.02 LBX1 TTAATTAG 2.9e0000 3.9e-003 -5.54 0.0 133 493 186 527 0.26978 1.6e-005 246 3 M0896_1.02 VENTX TTAATTAG 3.6e-001 4.8e-004 -7.64 0.0 105 493 161 540 0.21298 2.0e-006 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 5.6e-011 7.5e-014 -30.22 0.0 149 491 263 562 0.30346 3.1e-016 245 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 1.2e-005 1.7e-008 -17.90 0.0 148 492 211 479 0.30081 6.9e-011 245 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 8.1e-002 1.1e-004 -9.13 0.0 146 494 167 406 0.29555 4.4e-007 246 3 M0969_1.02 (LHX8)_(Mus_musculus)_(DBD_1.00) NYAATYANN 4.0e0000 5.4e-003 -5.22 0.0 128 492 194 574 0.26016 2.2e-005 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 8.3e-003 1.1e-005 -11.40 0.0 146 492 226 559 0.29675 4.6e-008 245 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYDDNN 9.0e-002 1.2e-004 -9.02 0.0 168 492 88 165 0.34146 5.0e-007 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 2.5e-005 3.3e-008 -17.22 0.0 148 492 225 521 0.30081 1.4e-010 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 1.8e-002 2.4e-005 -10.63 0.0 127 493 149 393 0.25761 9.8e-008 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 8.6e-008 1.2e-010 -22.88 0.0 148 492 242 540 0.30081 4.7e-013 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 2.8e-001 3.8e-004 -7.89 0.0 98 492 148 517 0.19919 1.5e-006 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 6.5e-007 8.8e-010 -20.85 0.0 148 492 219 488 0.30081 3.6e-012 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 1.5e-002 2.1e-005 -10.79 0.0 91 493 148 533 0.18458 8.4e-008 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 2.0e-005 2.7e-008 -17.44 0.0 148 492 243 569 0.30081 1.1e-010 245 3 M1125_1.02 (NKX1-1)_(Mus_musculus)_(DBD_1.00) NNTAATKRNN 9.9e-002 1.3e-004 -8.92 0.0 99 491 162 560 0.20163 5.5e-007 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 5.3e-007 7.2e-010 -21.05 0.0 149 491 245 552 0.30346 2.9e-012 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 1.9e-003 2.6e-006 -12.85 0.0 146 492 220 534 0.29675 1.1e-008 245 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 5.3e0000 7.1e-003 -4.94 0.0 135 493 113 296 0.27383 2.9e-005 246 3 M1863_1.02 FOXD1 GTAAACAW 4.4e-003 5.9e-006 -12.04 0.0 131 493 207 555 0.26572 2.4e-008 246 3 M2267_1.02 CDX2 TTTTATKRCHB 1.0e-002 1.3e-005 -11.22 0.0 134 490 203 535 0.27347 5.5e-008 244 3 M2278_1.02 FOS DVTGASTCATB 4.0e-011 5.4e-014 -30.55 0.0 236 490 353 538 0.48163 2.2e-016 244 3 M2289_1.02 JUN DDRATGATGTMAT 2.1e-003 2.9e-006 -12.76 0.0 250 488 313 491 0.51230 1.2e-008 243 3 M2292_1.02 JUND DRTGASTCATS 5.0e-015 6.7e-018 -39.55 0.0 236 490 358 526 0.48163 2.7e-020 244 3 M2385_1.02 FOXP2 RWGTAAACAVR 4.2e-002 5.6e-005 -9.79 0.0 146 490 223 558 0.29796 2.3e-007 244 3 M2388_1.02 SREBF2 RTGGGGTGAY 3.4e-001 4.6e-004 -7.68 0.0 251 491 322 526 0.51120 1.9e-006 245 3 M4452_1.02 BATF TYYYRWWATGASTCA 1.4e-006 1.8e-009 -20.12 0.0 240 486 355 558 0.49383 7.5e-012 242 3 M4463_1.02 IRF4 DNWSNRGAAVTGAVWSWD 5.3e-001 7.1e-004 -7.25 0.0 247 483 360 596 0.51139 3.0e-006 241 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 1.7e-008 2.3e-011 -24.48 0.0 236 486 351 545 0.48560 9.7e-014 242 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 1.7e-010 2.3e-013 -29.11 0.0 149 487 241 506 0.30595 9.4e-016 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 2.2e-004 2.9e-007 -15.05 0.0 134 486 227 580 0.27572 1.2e-009 242 3 M4619_1.02 FOSL1 BGGTGASTCAT 2.5e-015 3.4e-018 -40.23 0.0 244 490 352 501 0.49796 1.4e-020 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 5.0e-010 6.7e-013 -28.03 0.0 216 486 322 523 0.44444 2.8e-015 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 4.3e-005 5.8e-008 -16.67 0.0 138 484 201 478 0.28512 2.4e-010 241 3 M4681_1.02 BACH2 TGCTGAGTCA 7.7e-006 1.0e-008 -18.39 0.0 147 491 213 484 0.29939 4.2e-011 245 3 M5284_1.02 ALX3 BNTAATTRGY 8.3e0000 1.1e-002 -4.50 0.0 127 491 181 541 0.25866 4.6e-005 245 3 M5292_1.02 ATF4 RKATGAYGCAATM 3.3e-004 4.5e-007 -14.61 0.0 114 488 163 457 0.23361 1.9e-009 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 7.0e-002 9.5e-005 -9.26 0.0 251 487 170 254 0.51540 3.9e-007 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 8.0e0000 1.1e-002 -4.54 0.0 223 491 301 560 0.45418 4.4e-005 245 3 M5302_1.02 BATF3 TGATGACGTCATCA 2.4e0000 3.2e-003 -5.74 0.0 55 487 31 125 0.11294 1.3e-005 243 3 M5310_1.02 BSX NTAATBRS 3.7e-004 5.0e-007 -14.50 0.0 95 493 162 543 0.19270 2.0e-009 246 3 M5342_1.02 DLX4 NTAATTRN 9.9e0000 1.3e-002 -4.31 0.0 99 493 153 570 0.20081 5.5e-005 246 3 M5344_1.02 DLX6 NTAATTRB 3.7e0000 5.0e-003 -5.30 0.0 99 493 154 564 0.20081 2.0e-005 246 3 M5349_1.02 DUXA NTRAYYTAATCAN 2.1e0000 2.8e-003 -5.87 0.0 284 488 352 523 0.58197 1.2e-005 243 3 M5388_1.02 EMX2 NYTAATTAVB 4.1e-002 5.5e-005 -9.81 0.0 145 491 204 507 0.29532 2.3e-007 245 3 M5446_1.02 FOXD4L2 RTAAACA 1.3e-003 1.7e-006 -13.29 0.0 144 494 237 590 0.29150 6.9e-009 246 3 M5460_1.02 FOXL1 RTAAACA 8.5e-005 1.1e-007 -15.98 0.0 144 494 238 578 0.29150 4.7e-010 246 3 M5481_1.02 GBX2 NYTAATTRSB 4.9e0000 6.6e-003 -5.02 0.0 149 491 212 551 0.30346 2.7e-005 245 3 M5493_1.02 GMEB2 KTRCGTAA 3.2e-001 4.3e-004 -7.75 0.0 233 493 249 425 0.47262 1.8e-006 246 3 M5502_1.02 GSX1 NBTAATKRSN 2.3e-002 3.1e-005 -10.38 0.0 133 491 210 565 0.27088 1.3e-007 245 3 M5503_1.02 GSX2 DYTAATKRVN 3.4e-002 4.6e-005 -9.98 0.0 103 491 169 559 0.20978 1.9e-007 245 3 M5520_1.02 HMX3 BNTTAAKTGNY 3.5e0000 4.7e-003 -5.36 0.0 70 490 120 584 0.14286 1.9e-005 244 3 M5541_1.02 HOXB2 NNTAATKANN 2.1e-002 2.9e-005 -10.46 0.0 145 491 223 560 0.29532 1.2e-007 245 3 M5542_1.02 HOXB3 NYTAATKRNN 5.7e-003 7.7e-006 -11.78 0.0 145 491 226 560 0.29532 3.1e-008 245 3 M5543_1.02 HOXB5 NHTAATKRNN 6.9e-003 9.3e-006 -11.58 0.0 145 491 232 580 0.29532 3.8e-008 245 3 M5544_1.02 HOXC10 DTTTWATKDB 2.5e-002 3.4e-005 -10.30 0.0 147 491 233 582 0.29939 1.4e-007 245 3 M5547_1.02 HOXC11 DRTCRTWAAAH 9.4e-003 1.3e-005 -11.28 0.0 198 490 274 527 0.40408 5.2e-008 244 3 M5551_1.02 HOXC12 TTTTATTRC 5.4e-001 7.3e-004 -7.22 0.0 30 492 63 565 0.06098 3.0e-006 245 3 M5553_1.02 HOXC13 CYAATAAAAH 1.8e-001 2.5e-004 -8.31 0.0 29 491 63 555 0.05906 1.0e-006 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 2.2e-001 3.0e-004 -8.12 0.0 197 491 256 506 0.40122 1.2e-006 245 3 M5557_1.02 HOXD12 GTAATAAAA 3.0e0000 4.1e-003 -5.50 0.0 26 492 55 564 0.05285 1.7e-005 245 3 M5583_1.02 ISL2 YTAAKTGC 2.5e-001 3.4e-004 -8.00 0.0 43 493 87 592 0.08722 1.4e-006 246 3 M5587_1.02 JDP2 ATGASTCAT 8.2e-013 1.1e-015 -34.44 0.0 236 492 330 490 0.47967 4.5e-018 245 3 M5604_1.02 LMX1A YTAATTAA 2.0e-001 2.7e-004 -8.20 0.0 135 493 195 527 0.27383 1.1e-006 246 3 M5605_1.02 LMX1B TTAATTRN 4.2e-001 5.6e-004 -7.48 0.0 147 493 214 549 0.29817 2.3e-006 246 3 M5623_1.02 MEOX1 VSTAATTAHC 1.1e0000 1.5e-003 -6.52 0.0 123 491 182 541 0.25051 6.0e-006 245 3 M5624_1.02 MEOX2 DSTAATTAWN 1.6e0000 2.2e-003 -6.11 0.0 119 491 181 561 0.24236 9.0e-006 245 3 M5635_1.02 MNX1 TTTAATTRNH 1.8e-005 2.4e-008 -17.53 0.0 147 491 240 562 0.29939 9.9e-011 245 3 M5672_1.02 NOTO NBTAATTARN 3.1e-002 4.1e-005 -10.09 0.0 197 491 280 550 0.40122 1.7e-007 245 3 M5702_1.02 PAX1 DKCANTCAWGCGTGACG 5.5e-003 7.4e-006 -11.81 0.0 144 484 112 240 0.29752 3.1e-008 241 3 M5746_1.02 POU6F2 WTAATKAGST 8.9e-002 1.2e-004 -9.04 0.0 137 491 200 530 0.27902 4.9e-007 245 3 M5889_1.02 TBX21 GGTGTGAHWTCACACC 2.7e-001 3.6e-004 -7.93 0.0 249 485 187 287 0.51340 1.5e-006 242 3 M5941_1.02 UNCX NTAATYBAATTAN 1.2e0000 1.6e-003 -6.42 0.0 208 488 282 542 0.42623 6.7e-006 243 3 M5944_1.02 VAX1 YTAATTAN 4.9e0000 6.6e-003 -5.02 0.0 107 493 162 555 0.21704 2.7e-005 246 3 M5945_1.02 VAX2 YTAATTAN 2.4e-001 3.2e-004 -8.06 0.0 109 493 172 559 0.22110 1.3e-006 246 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 3.9e-002 5.2e-005 -9.86 0.0 255 489 207 312 0.52147 2.1e-007 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 1.4e-003 1.9e-006 -13.16 0.0 133 491 220 580 0.27088 7.9e-009 245 3 M6152_1.02 ATF1 VTGACGTCAV 1.2e0000 1.6e-003 -6.43 0.0 253 491 280 453 0.51527 6.6e-006 245 3 M6157_1.02 BARX2 TYRWTAATKR 4.3e0000 5.9e-003 -5.14 0.0 133 491 186 529 0.27088 2.4e-005 245 3 M6166_1.02 CDC5L RWTAYRTTAAMWCVC 9.0e-001 1.2e-003 -6.72 0.0 144 486 209 543 0.29630 5.0e-006 242 3 M6180_1.02 CREB1 RTGACGTMA 7.9e-004 1.1e-006 -13.75 0.0 248 492 341 544 0.50407 4.4e-009 245 3 M6181_1.02 CREM CRVTGACGTCA 9.0e0000 1.2e-002 -4.42 0.0 326 490 385 516 0.66531 5.0e-005 244 3 M6228_1.02 FOSB CTGACTCAYV 4.0e-010 5.4e-013 -28.25 0.0 169 491 290 574 0.34420 2.2e-015 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 2.4e-002 3.2e-005 -10.35 0.0 178 488 270 574 0.36475 1.3e-007 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 3.5e-003 4.7e-006 -12.26 0.0 118 486 175 494 0.24280 2.0e-008 242 3 M6236_1.02 FOXC2 YCTRDSWAAACAAAC 1.3e-002 1.7e-005 -10.99 0.0 148 486 207 496 0.30453 7.0e-008 242 3 M6247_1.02 FOXO4 MRTAAACAA 1.8e0000 2.5e-003 -6.00 0.0 130 492 200 578 0.26423 1.0e-005 245 3 M6258_1.02 GATA6 NWGATAA 5.5e0000 7.4e-003 -4.91 0.0 58 494 99 563 0.11741 3.0e-005 246 3 M6269_1.02 HBP1 AYYCATTGA 7.1e-002 9.5e-005 -9.26 0.0 148 492 226 566 0.30081 3.9e-007 245 3 M6290_1.02 HOXA13 CCAATAAWAHC 5.9e-003 8.0e-006 -11.74 0.0 146 490 226 555 0.29796 3.3e-008 244 3 M6300_1.02 HOXC8 GSBHATYAATSAAR 7.1e-002 9.5e-005 -9.26 0.0 147 487 222 553 0.30185 3.9e-007 243 3 M6301_1.02 HOXD10 AATTAAARCA 1.1e-001 1.5e-004 -8.84 0.0 149 491 228 570 0.30346 5.9e-007 245 3 M6304_1.02 HOXD9 HMATNAAWYT 2.1e-004 2.9e-007 -15.07 0.0 95 491 165 548 0.19348 1.2e-009 245 3 M6333_1.02 MAFG MATGACT 2.2e-003 2.9e-006 -12.75 0.0 234 494 342 580 0.47368 1.2e-008 246 3 M6357_1.02 NANOG KTTAATGG 2.3e-003 3.1e-006 -12.67 0.0 157 493 242 561 0.31846 1.3e-008 246 3 M6359_1.02 NFE2L1 NATGACD 6.1e-002 8.2e-005 -9.41 0.0 112 494 187 589 0.22672 3.3e-007 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 1.1e0000 1.5e-003 -6.51 0.0 143 489 223 592 0.29243 6.1e-006 244 3 M6376_1.02 NKX2-5 TYAAGTG 2.0e0000 2.7e-003 -5.93 0.0 246 494 348 595 0.49798 1.1e-005 246 3 M6380_1.02 NOBOX HTAATTRSY 9.3e-001 1.2e-003 -6.69 0.0 120 492 180 548 0.24390 5.1e-006 245 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 1.2e-003 1.7e-006 -13.31 0.0 137 483 222 561 0.28364 6.9e-009 241 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 9.9e0000 1.3e-002 -4.31 0.0 288 486 383 570 0.59259 5.6e-005 242 3 M6415_1.02 PDX1 CTAATTACY 5.4e-002 7.3e-005 -9.53 0.0 126 492 176 491 0.25610 3.0e-007 245 3 M6419_1.02 PKNOX1 HATCARTCAABYB 3.5e-002 4.8e-005 -9.95 0.0 314 488 419 563 0.64344 2.0e-007 243 3 M6440_1.02 PRRX2 YTAATTR 8.5e0000 1.1e-002 -4.48 0.0 116 494 163 524 0.23482 4.7e-005 246 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).