# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN26.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN26.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN26.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 599 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN26.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Thu May 10 18:27:09 PDT 2018)
#   negatives: 599 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN26.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Thu May 10 18:27:09 PDT 2018)
#        host: surya
#        when: Thu May 10 19:12:59 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.218 C 0.278 G 0.276 T 0.228


MOTIF ATTAGYAC DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    ATTAGYAC   GTRCTAAT         41          0   2.2e-013   6.6e-009
#         ATTAGCAC   GTGCTAAT         31          0   3.1e-010   9.2e-006
#         ATTAGTAC   GTACTAAT         10          0   9.4e-004   2.8e+001

letter-probability matrix: alength= 4 w= 8 nsites= 42 E= 6.6e-009
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 0.000000 1.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.738095 0.000000 0.261905
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000


MOTIF CCTGGCY DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     CCTGGCY    RGCCAGG         66         15   1.4e-009   4.0e-005
#          CCTGGCC    GGCCAGG         44         11   2.7e-006   8.0e-002
#          CCTGGCT    AGCCAGG         28          4   7.6e-006   2.2e-001

letter-probability matrix: alength= 4 w= 7 nsites= 76 E= 4.0e-005
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.631579 0.000000 0.368421


MOTIF AAACACA DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     AAACACA    TGTGTTT         45         11   1.6e-006   4.8e-002
#          AAACACA    TGTGTTT         45         11   1.6e-006   4.8e-002

letter-probability matrix: alength= 4 w= 7 nsites= 62 E= 4.8e-002
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 15.12 seconds