Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
GGGATTA | 7 | GGGATTA |
AGSCWGG | 7 | AGGCTGG |
TCYCAAA | 7 | TCTCAAA |
GACTCAK | 7 | GACTCAT |
AAAAATAC | 8 | AAAAATAC |
ACCTC | 5 | ACCTC |
CRGGAGGC | 8 | CGGGAGGC |
AGTAGAG | 7 | AGTAGAG |
CTTGAACC | 8 | CTTGAACC |
TGCAGTGR | 8 | TGCAGTGA |
GGTGRC | 6 | GGTGGC |
AAATAAAT | 8 | AAATAAAT |
GTTTGTK | 7 | GTTTGTG |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.268 C 0.232 G 0.232 T 0.268
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
TCYCAAA | DREME-3 | chr1_KI270713v1_random | - | 20878 | 20884 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | - | 402189 | 402195 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 1203072 | 1203078 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chrX | - | 1393456 | 1393462 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 1413646 | 1413652 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 1443091 | 1443097 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 1647154 | 1647160 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 2626892 | 2626898 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 3971724 | 3971730 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 3972029 | 3972035 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 3972336 | 3972342 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 7016111 | 7016117 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 11533274 | 11533280 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | - | 12062173 | 12062179 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chrX | - | 13692097 | 13692103 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | - | 15673228 | 15673234 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr5 | - | 17145502 | 17145508 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chrX | - | 17413173 | 17413179 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 22054182 | 22054188 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 22054206 | 22054212 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | - | 22202089 | 22202095 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 22837767 | 22837773 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 22838073 | 22838079 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chrX | - | 24144214 | 24144220 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 27134628 | 27134634 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 28235354 | 28235360 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 28597176 | 28597182 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 28607098 | 28607104 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 28895841 | 28895847 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | - | 30570767 | 30570773 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr5 | - | 32157772 | 32157778 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 33442141 | 33442147 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 34185175 | 34185181 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 34390774 | 34390780 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 35386172 | 35386178 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 35701877 | 35701883 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 35905607 | 35905613 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 36123008 | 36123014 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 36319441 | 36319447 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr22 | - | 36452186 | 36452192 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 37275042 | 37275048 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr8 | - | 37793083 | 37793089 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr8 | - | 37793124 | 37793130 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 42674555 | 42674561 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 43322161 | 43322167 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 43655935 | 43655941 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 43656047 | 43656053 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | - | 43709421 | 43709427 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 43717739 | 43717745 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 45832015 | 45832021 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 46085207 | 46085213 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 46102264 | 46102270 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 46213315 | 46213321 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr21 | - | 46320115 | 46320121 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 46368717 | 46368723 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr3 | - | 48557550 | 48557556 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 48920913 | 48920919 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr18 | - | 49515227 | 49515233 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 49569729 | 49569735 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 50459255 | 50459261 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 51703523 | 51703529 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 51960852 | 51960858 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 57245387 | 57245393 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 57458120 | 57458126 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 58780433 | 58780439 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr18 | - | 59908068 | 59908074 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr20 | - | 62794927 | 62794933 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 64408124 | 64408130 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 65513228 | 65513234 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 65531579 | 65531585 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr5 | - | 65555490 | 65555496 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr11 | - | 67122690 | 67122696 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 67364243 | 67364249 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 69128262 | 69128268 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 75217795 | 75217801 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 75217975 | 75217981 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 75635436 | 75635442 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | - | 77563023 | 77563029 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr10 | - | 87664557 | 87664563 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | - | 90182640 | 90182646 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr13 | - | 98581032 | 98581038 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr10 | - | 100044725 | 100044731 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr10 | - | 101275580 | 101275586 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr7 | - | 108403757 | 108403763 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr10 | - | 113077715 | 113077721 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 120196072 | 120196078 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | - | 124922554 | 124922560 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr9 | - | 129802568 | 129802574 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | - | 134109515 | 134109521 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr7 | - | 149144602 | 149144608 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 210236432 | 210236438 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 229219024 | 229219030 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 235129457 | 235129463 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 236468647 | 236468653 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | - | 244838804 | 244838810 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | + | 1115298 | 1115304 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | + | 1203273 | 1203279 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chrX | + | 1246241 | 1246247 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 1647395 | 1647401 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chrX | + | 1800353 | 1800359 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chrX | + | 2418076 | 2418082 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr16 | + | 2537012 | 2537018 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr16 | + | 2537306 | 2537312 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr16 | + | 2916335 | 2916341 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 3971623 | 3971629 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | + | 3972566 | 3972572 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 4183904 | 4183910 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr16 | + | 12062372 | 12062378 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 17108928 | 17108934 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr10 | + | 17220219 | 17220225 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr16 | + | 21515171 | 21515177 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 22054218 | 22054224 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr18 | + | 23660106 | 23660112 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chrX | + | 24143934 | 24143940 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr22 | + | 25017378 | 25017384 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 26799309 | 26799315 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | + | 27231544 | 27231550 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 28373641 | 28373647 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 28517117 | 28517123 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr6 | + | 28898644 | 28898650 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 29221482 | 29221488 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | + | 30368240 | 30368246 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr22 | + | 30592792 | 30592798 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr6 | + | 30617130 | 30617136 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | + | 30707829 | 30707835 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr1 | + | 30799758 | 30799764 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr12 | + | 31763209 | 31763215 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr6 | + | 31863481 | 31863487 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr5 | + | 32157973 | 32157979 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr5 | + | 32158086 | 32158092 | 7.45e-05 | 0.223 | TCTCAaa |
TCYCAAA | DREME-3 | chr21 | + | 33445782 | 33445788 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 33445869 | 33445875 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | + | 34218452 | 34218458 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | + | 34232405 | 34232411 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr14 | + | 34460934 | 34460940 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr14 | + | 34460994 | 34461000 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | + | 34474697 | 34474703 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 35905948 | 35905954 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 36123183 | 36123189 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr22 | + | 36452386 | 36452392 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 37466626 | 37466632 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 38349644 | 38349650 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | + | 38667234 | 38667240 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 38730848 | 38730854 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr19 | + | 39033472 | 39033478 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 39165510 | 39165516 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 39438525 | 39438531 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 39438555 | 39438561 | 7.45e-05 | 0.223 | TCTCAaa |
TCYCAAA | DREME-3 | chr19 | + | 40567292 | 40567298 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr22 | + | 41672216 | 41672222 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr22 | + | 41672605 | 41672611 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 42149263 | 42149269 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr6 | + | 43322000 | 43322006 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 43709684 | 43709690 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr21 | + | 43857591 | 43857597 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 45066935 | 45066941 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 45329813 | 45329819 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr17 | + | 45832231 | 45832237 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr20 | + | 46085111 | 46085117 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 46145944 | 46145950 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr20 | + | 46368754 | 46368760 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr12 | + | 49125402 | 49125408 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr19 | + | 50134528 | 50134534 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 50694125 | 50694131 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr20 | + | 51961045 | 51961051 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 52945698 | 52945704 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr11 | + | 65508190 | 65508196 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr5 | + | 66733674 | 66733680 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 67699179 | 67699185 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr3 | + | 71982901 | 71982907 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr10 | + | 73587470 | 73587476 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr15 | + | 73631915 | 73631921 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | + | 73632032 | 73632038 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr15 | + | 74528417 | 74528423 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 76853904 | 76853910 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr17 | + | 81584245 | 81584251 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr6 | + | 90222895 | 90222901 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr13 | + | 98584092 | 98584098 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr7 | + | 99376057 | 99376063 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr10 | + | 100044591 | 100044597 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr10 | + | 101275483 | 101275489 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr13 | + | 112213612 | 112213618 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr10 | + | 114525526 | 114525532 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr10 | + | 114727045 | 114727051 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr5 | + | 116546477 | 116546483 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr12 | + | 120196061 | 120196067 | 7.45e-05 | 0.223 | tctCAAA |
TCYCAAA | DREME-3 | chr2 | + | 128228020 | 128228026 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr2 | + | 158232450 | 158232456 | 7.45e-05 | 0.223 | TCTCAAA |
TCYCAAA | DREME-3 | chr4 | + | 190112101 | 190112107 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 205266236 | 205266242 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 223719534 | 223719540 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 233244706 | 233244712 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 235129657 | 235129663 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 235862791 | 235862797 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 236468615 | 236468621 | 7.45e-05 | 0.223 | tctcaaa |
TCYCAAA | DREME-3 | chr1 | + | 241131194 | 241131200 | 7.45e-05 | 0.223 | TCTCAAA |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_8 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif TCYCAAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_8 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN23.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.