Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
GCTCWGY | 7 | GCTCTGT |
GWTWACA | 7 | GTTTACA |
GTGTTY | 6 | GTGTTT |
GAGGCTB | 7 | GAGGCTT |
AATRAATG | 8 | AATGAATG |
CCTCCCAM | 8 | CCTCCCAA |
AAAYR | 5 | AAATA |
AACTCCTG | 8 | AACTCCTG |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.266 C 0.234 G 0.234 T 0.266
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
AATRAATG | DREME-5 | chr5 | + | 1035086 | 1035093 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035090 | 1035097 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035114 | 1035121 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035138 | 1035145 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035142 | 1035149 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035154 | 1035161 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035172 | 1035179 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035208 | 1035215 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035232 | 1035239 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035260 | 1035267 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035284 | 1035291 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035288 | 1035295 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035292 | 1035299 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035312 | 1035319 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr5 | + | 1035324 | 1035331 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr19 | + | 1267472 | 1267479 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr19 | + | 1267476 | 1267483 | 1.95e-05 | 0.0758 | aatgaatG |
AATRAATG | DREME-5 | chr19 | + | 1267480 | 1267487 | 1.95e-05 | 0.0758 | aatGAATG |
AATRAATG | DREME-5 | chr19 | + | 1267484 | 1267491 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr4 | + | 7663308 | 7663315 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 8357233 | 8357240 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602456 | 18602463 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602460 | 18602467 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602476 | 18602483 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602480 | 18602487 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602496 | 18602503 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602500 | 18602507 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602519 | 18602526 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602535 | 18602542 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602539 | 18602546 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602543 | 18602550 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602558 | 18602565 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602578 | 18602585 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602582 | 18602589 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602586 | 18602593 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602602 | 18602609 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602614 | 18602621 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602618 | 18602625 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602622 | 18602629 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602637 | 18602644 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602657 | 18602664 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602661 | 18602668 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602665 | 18602672 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602681 | 18602688 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602693 | 18602700 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602697 | 18602704 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602701 | 18602708 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602705 | 18602712 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602720 | 18602727 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602724 | 18602731 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602740 | 18602747 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602744 | 18602751 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602764 | 18602771 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602768 | 18602775 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 18602784 | 18602791 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 24364909 | 24364916 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr6 | + | 37691177 | 37691184 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr20 | + | 38153547 | 38153554 | 1.95e-05 | 0.0758 | aaTgaatg |
AATRAATG | DREME-5 | chr5 | + | 38790174 | 38790181 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr21 | + | 41877424 | 41877431 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr20 | + | 44114487 | 44114494 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr10 | + | 51107000 | 51107007 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr6 | + | 57471692 | 57471699 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr20 | + | 63978311 | 63978318 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr20 | + | 63978315 | 63978322 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr20 | + | 63978319 | 63978326 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr12 | + | 65630831 | 65630838 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr12 | + | 65630835 | 65630842 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr12 | + | 65630839 | 65630846 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr12 | + | 65630843 | 65630850 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 68236735 | 68236742 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 68236755 | 68236762 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr1 | + | 68236759 | 68236766 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr10 | + | 110546693 | 110546700 | 1.95e-05 | 0.0758 | aatGAATG |
AATRAATG | DREME-5 | chr10 | + | 110546697 | 110546704 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr10 | + | 110546701 | 110546708 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr9 | + | 136150930 | 136150937 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr9 | + | 136150978 | 136150985 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr9 | + | 136150998 | 136151005 | 1.95e-05 | 0.0758 | aatgaatg |
AATRAATG | DREME-5 | chr16 | - | 778977 | 778984 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 778981 | 778988 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 778993 | 779000 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779049 | 779056 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779105 | 779112 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779191 | 779198 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779221 | 779228 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779282 | 779289 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 779294 | 779301 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 2515214 | 2515221 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr16 | - | 4346429 | 4346436 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815203 | 4815210 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815237 | 4815244 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815253 | 4815260 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815257 | 4815264 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815297 | 4815304 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815317 | 4815324 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815329 | 4815336 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815349 | 4815356 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815361 | 4815368 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815389 | 4815396 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815433 | 4815440 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815437 | 4815444 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815461 | 4815468 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815465 | 4815472 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815469 | 4815476 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815473 | 4815480 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815477 | 4815484 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 4815481 | 4815488 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr19 | - | 5342814 | 5342821 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 5418320 | 5418327 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834018 | 10834025 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834042 | 10834049 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834046 | 10834053 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834058 | 10834065 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834086 | 10834093 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834098 | 10834105 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834138 | 10834145 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834162 | 10834169 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834166 | 10834173 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834242 | 10834249 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834262 | 10834269 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834274 | 10834281 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834322 | 10834329 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834370 | 10834377 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 10834374 | 10834381 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr18 | - | 12879475 | 12879482 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 23561609 | 23561616 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 23561613 | 23561620 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr3 | - | 24363518 | 24363525 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr6 | - | 37283435 | 37283442 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr10 | - | 51106813 | 51106820 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr10 | - | 51106817 | 51106824 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr20 | - | 63978300 | 63978307 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr12 | - | 65630956 | 65630963 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr2 | - | 72275213 | 72275220 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 73431498 | 73431505 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr15 | - | 98687116 | 98687123 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr11 | - | 112885753 | 112885760 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr11 | - | 112885757 | 112885764 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr10 | - | 125626475 | 125626482 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr10 | - | 125626479 | 125626486 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr9 | - | 129720382 | 129720389 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr9 | - | 129720393 | 129720400 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr5 | - | 139881536 | 139881543 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr5 | - | 139881540 | 139881547 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 150969625 | 150969632 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 150969629 | 150969636 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr7 | - | 150969633 | 150969640 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 151510625 | 151510632 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr3 | - | 160692185 | 160692192 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr1 | - | 210330049 | 210330056 | 1.95e-05 | 0.0758 | AATGAATG |
AATRAATG | DREME-5 | chr5 | + | 408126 | 408133 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr1 | + | 805248 | 805255 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | + | 8394983 | 8394990 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr1 | + | 18602440 | 18602447 | 4.17e-05 | 0.125 | AATAAatg |
AATRAATG | DREME-5 | chr10 | + | 21674019 | 21674026 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr3 | + | 29600338 | 29600345 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr6 | + | 34689360 | 34689367 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr6 | + | 36314802 | 36314809 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr17 | + | 38702862 | 38702869 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr17 | + | 38702862 | 38702869 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr2 | + | 47173663 | 47173670 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr16 | + | 57285414 | 57285421 | 4.17e-05 | 0.125 | aataaatg |
AATRAATG | DREME-5 | chr6 | + | 57471389 | 57471396 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | + | 67440629 | 67440636 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr14 | + | 99195989 | 99195996 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr15 | + | 99567217 | 99567224 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr15 | + | 101743399 | 101743406 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr12 | + | 132330467 | 132330474 | 4.17e-05 | 0.125 | aatAAATG |
AATRAATG | DREME-5 | chr5 | + | 142830145 | 142830152 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr5 | + | 169171406 | 169171413 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | + | 207968868 | 207968875 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | + | 234524275 | 234524282 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr2 | + | 236074604 | 236074611 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr19 | - | 4815221 | 4815228 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr19 | - | 4815409 | 4815416 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chrX | - | 12158685 | 12158692 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr19 | - | 19381535 | 19381542 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr9 | - | 20512661 | 20512668 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | - | 23561832 | 23561839 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr6 | - | 28982455 | 28982462 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr15 | - | 33113132 | 33113139 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr19 | - | 34181710 | 34181717 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr11 | - | 43312710 | 43312717 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | - | 51430634 | 51430641 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr12 | - | 65630639 | 65630646 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr16 | - | 69183134 | 69183141 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr11 | - | 72079141 | 72079148 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr6 | - | 90183555 | 90183562 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr5 | - | 92568718 | 92568725 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr11 | - | 117833134 | 117833141 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr12 | - | 132330481 | 132330488 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chrX | - | 133936850 | 133936857 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr5 | - | 139376594 | 139376601 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr1 | - | 175172654 | 175172661 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr2 | - | 236074630 | 236074637 | 4.17e-05 | 0.125 | AATAAATG |
AATRAATG | DREME-5 | chr7 | + | 3279833 | 3279840 | 8.33e-05 | 0.227 | AATCAATG |
AATRAATG | DREME-5 | chr9 | + | 15295018 | 15295025 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr8 | + | 19055872 | 19055879 | 8.33e-05 | 0.227 | AATCAATG |
AATRAATG | DREME-5 | chr22 | + | 28438504 | 28438511 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr12 | + | 31426553 | 31426560 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr16 | + | 69186804 | 69186811 | 8.33e-05 | 0.227 | AATCAATG |
AATRAATG | DREME-5 | chr16 | + | 72566510 | 72566517 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr6 | + | 75751509 | 75751516 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr5 | + | 78660330 | 78660337 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr1 | + | 162697176 | 162697183 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr1 | + | 175172803 | 175172810 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr1 | + | 210330292 | 210330299 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr3 | - | 18436658 | 18436665 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr5 | - | 36932047 | 36932054 | 8.33e-05 | 0.227 | AATCAATG |
AATRAATG | DREME-5 | chr2 | - | 42424459 | 42424466 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr9 | - | 87598601 | 87598608 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr1 | - | 108750828 | 108750835 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr7 | - | 129217333 | 129217340 | 8.33e-05 | 0.227 | AATTAATG |
AATRAATG | DREME-5 | chr5 | - | 138506309 | 138506316 | 8.33e-05 | 0.227 | AATCAATG |
AATRAATG | DREME-5 | chr3 | - | 160692113 | 160692120 | 8.33e-05 | 0.227 | AATTAATG |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif AATRAATG /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_13 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZSCAN16.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.