Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
GTAWACA 7 GTATACA
CATTTATK 8 CATTTATT
GCRCCTA 7 GCACCTA
CTGTRTGC 8 CTGTGTGC
AGCACTTW 8 AGCACTTA
AGCKGGGA 8 AGCTGGGA

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.230 C 0.270 G 0.270 T 0.230


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
CATTTATK DREME-2 chr19 + 1514256 1514263 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 2783662 2783669 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 + 3229119 3229126 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 3229243 3229250 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 3403007 3403014 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 3403136 3403143 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 + 3710700 3710707 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 4583708 4583715 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 4796995 4797002 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 11226846 11226853 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 11342789 11342796 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 + 14348830 14348837 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 15038694 15038701 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 15038694 15038701 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 15038803 15038810 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 17293037 17293044 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 18132682 18132689 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr16 + 21515675 21515682 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 27672569 27672576 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr17 + 32253309 32253316 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 + 35757164 35757171 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr22 + 37686852 37686859 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 47312618 47312625 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr16 + 48623303 48623310 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 + 48869288 48869295 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr19 + 49539338 49539345 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr12 + 54216909 54216916 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr17 + 57255350 57255357 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr15 + 66160613 66160620 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr16 + 66954376 66954383 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr11 + 67423223 67423230 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr11 + 67423249 67423256 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr16 + 70291128 70291135 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr15 + 77878263 77878270 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr15 + 77878409 77878416 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 85275176 85275183 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr16 + 85535936 85535943 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr5 + 93598903 93598910 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr14 + 100587811 100587818 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr10 + 110762499 110762506 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 + 111269405 111269412 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr12 + 113334775 113334782 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 156457096 156457103 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr6 + 156776776 156776783 9.12e-06 0.0616 catttatt
CATTTATK DREME-2 chr1 + 172359823 172359830 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr5 + 176693693 176693700 9.12e-06 0.0616 Catttatt
CATTTATK DREME-2 chr19 - 850235 850242 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr16 - 2026621 2026628 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 3455821 3455828 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 3470313 3470320 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 4832036 4832043 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 10436668 10436675 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 11226725 11226732 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr1 - 11272726 11272733 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 11342621 11342628 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 18251900 18251907 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr1 - 19715538 19715545 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 - 28761341 28761348 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 - 29149311 29149318 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 - 30600169 30600176 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 37507260 37507267 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr22 - 37686929 37686936 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 38684192 38684199 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chrX - 47582047 47582054 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 50494504 50494511 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 50494801 50494808 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 50495272 50495279 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 - 50495397 50495404 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 - 51153965 51153972 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr8 - 60807754 60807761 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr17 - 68101305 68101312 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr16 - 85328106 85328113 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr4 - 86977767 86977774 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr14 - 100587685 100587692 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr9 - 111525825 111525832 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 113334678 113334685 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr10 - 113521137 113521144 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 121686677 121686684 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 121888533 121888540 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 122961903 122961910 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 124686445 124686452 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr12 - 124745259 124745266 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr4 - 145938753 145938760 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr5 - 174503300 174503307 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr5 - 176692737 176692744 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr1 - 200890897 200890904 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr1 - 210654475 210654482 9.12e-06 0.0616 CATTTATT
CATTTATK DREME-2 chr19 + 2062007 2062014 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 + 3229147 3229154 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr7 - 5556067 5556074 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 11203086 11203093 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 13764204 13764211 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 + 14432243 14432250 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 17393080 17393087 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr8 + 17676579 17676586 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr22 + 24952316 24952323 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr6 - 27633242 27633249 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr21 + 29217947 29217954 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 37507017 37507024 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 39498562 39498569 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr20 + 41340246 41340253 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr3 - 42820108 42820115 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr19 - 50496614 50496621 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr15 + 55197203 55197210 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr8 + 61591673 61591680 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr15 - 69475790 69475797 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr16 + 77409647 77409654 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr2 - 84958554 84958561 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr10 - 113521168 113521175 1.99e-05 0.102 CATTTATG
CATTTATK DREME-2 chr6 + 158040210 158040217 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr6 + 158040321 158040328 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr1 + 167658877 167658884 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr5 + 176693825 176693832 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chr1 + 193104332 193104339 1.99e-05 0.102 catttatg
CATTTATK DREME-2 chrUn_KI270466v1 - 217 224 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chrUn_KI270467v1 - 2452 2459 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chrUn_KI270467v1 - 3037 3044 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr19 - 1445648 1445655 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr19 + 3403164 3403171 3.97e-05 0.163 catttatc
CATTTATK DREME-2 chr6 + 15413782 15413789 3.97e-05 0.163 catttata
CATTTATK DREME-2 chr10 + 15796802 15796809 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr16 - 28070640 28070647 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr17 - 30698321 30698328 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr12 + 30847530 30847537 3.97e-05 0.163 catttata
CATTTATK DREME-2 chr16 + 30876482 30876489 3.97e-05 0.163 catttatc
CATTTATK DREME-2 chr19 + 31312969 31312976 3.97e-05 0.163 catttata
CATTTATK DREME-2 chr15 + 34038116 34038123 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr19 + 35757050 35757057 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr22 - 37686794 37686801 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr6 + 47047975 47047982 3.97e-05 0.163 catttata
CATTTATK DREME-2 chr19 - 47312541 47312548 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chrX - 47581766 47581773 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr1 + 52552479 52552486 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr1 - 61149800 61149807 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr15 - 71279451 71279458 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr16 + 86364018 86364025 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr1 - 86774635 86774642 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr3 - 97579382 97579389 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr15 + 98653660 98653667 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr12 + 104668626 104668633 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr6 - 107493163 107493170 3.97e-05 0.163 CATTTATA
CATTTATK DREME-2 chr7 - 114312876 114312883 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chr6 - 149963726 149963733 3.97e-05 0.163 CATTTATC
CATTTATK DREME-2 chrUn_KI270467v1 + 3206 3213 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr19 + 752974 752981 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr19 + 753194 753201 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr19 - 1021823 1021830 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 + 2783773 2783780 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 - 3371468 3371475 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 + 3706425 3706432 6.43e-05 0.177 tAtttatt
CATTTATK DREME-2 chr19 + 3706429 3706436 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr19 + 3706433 3706440 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr19 - 4212212 4212219 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 - 4212216 4212223 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 - 4212220 4212227 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 - 4212262 4212269 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 + 4832092 4832099 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr19 + 4832104 4832111 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr1 - 11272745 11272752 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr19 - 12777854 12777861 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr6 + 13331587 13331594 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr1 - 15617144 15617151 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 + 16110948 16110955 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr3 + 17032745 17032752 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr8 - 18748318 18748325 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr9 + 18977046 18977053 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr9 - 18977156 18977163 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr22 + 21567481 21567488 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr10 - 23408737 23408744 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr6 - 27633430 27633437 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr8 - 29229975 29229982 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr8 - 29230008 29230015 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr8 - 29230012 29230019 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr8 - 30255133 30255140 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr19 + 31313005 31313012 6.43e-05 0.177 aatttatt
CATTTATK DREME-2 chr19 - 31313001 31313008 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr19 + 32972435 32972442 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr19 - 33371045 33371052 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr22 + 38606799 38606806 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr6 + 39688788 39688795 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr3 - 42820093 42820100 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr6 + 47047956 47047963 6.43e-05 0.177 Tatttatt
CATTTATK DREME-2 chr19 + 49818075 49818082 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr1 + 53837888 53837895 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr15 - 66160469 66160476 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr15 + 66160718 66160725 6.43e-05 0.177 aatttatt
CATTTATK DREME-2 chr10 - 69125238 69125245 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr15 + 69143840 69143847 6.43e-05 0.177 aatttatt
CATTTATK DREME-2 chr16 - 70290948 70290955 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr17 + 76700626 76700633 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr18 + 76823574 76823581 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr6 - 84883280 84883287 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr1 + 85274865 85274872 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr2 + 85742476 85742483 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr16 - 86364219 86364226 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr2 - 86704027 86704034 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr9 - 87600292 87600299 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr10 + 95550557 95550564 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr1 - 107767190 107767197 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr12 + 113334748 113334755 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr12 - 121686564 121686571 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr1 - 146036328 146036335 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr6 + 151068027 151068034 6.43e-05 0.177 GATTTatt
CATTTATK DREME-2 chr6 + 156890932 156890939 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr6 + 156891065 156891072 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr1 + 161765259 161765266 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr1 + 172360122 172360129 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr5 - 174503240 174503247 6.43e-05 0.177 TATTTATT
CATTTATK DREME-2 chr5 + 176693697 176693704 6.43e-05 0.177 tatttatt
CATTTATK DREME-2 chr1 - 182617544 182617551 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr1 - 205266680 205266687 6.43e-05 0.177 AATTTATT
CATTTATK DREME-2 chr1 + 210654527 210654534 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr1 - 226723909 226723916 6.43e-05 0.177 GATTTATT
CATTTATK DREME-2 chr1 + 245401372 245401379 6.43e-05 0.177 TATTTATT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CATTTATK /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF792.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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