Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
ACATAYA | 7 | ACATACA |
GATTTCTB | 8 | GATTTCTC |
AGCAGHAA | 8 | AGCAGAAA |
AGTCTDAT | 8 | AGTCTTAT |
ATAAATAA | 8 | ATAAATAA |
CAAGRGAA | 8 | CAAGAGAA |
GGGAWYC | 7 | GGGAATC |
AGGCCAGR | 8 | AGGCCAGG |
GTGACW | 6 | GTGACA |
TTTTGARA | 8 | TTTTGAGA |
GAGACYC | 7 | GAGACTC |
AYTATCAG | 8 | ACTATCAG |
AATRTGTC | 8 | AATATGTC |
AARGTTTC | 8 | AAGGTTTC |
ARTGGGAT | 8 | AATGGGAT |
GCCTGYA | 7 | GCCTGCA |
CCAGGAGA | 8 | CCAGGAGA |
ACTTGWCA | 8 | ACTTGACA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.304 C 0.196 G 0.196 T 0.304
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
AGTCTDAT | DREME-4 | chr8 | + | 10751675 | 10751682 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr18 | + | 11710764 | 11710771 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr8 | + | 22520194 | 22520201 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr3 | + | 29194444 | 29194451 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr18 | + | 30941189 | 30941196 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr12 | + | 33949654 | 33949661 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr10 | + | 35257610 | 35257617 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr12 | + | 46506394 | 46506401 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr3 | + | 50735180 | 50735187 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr15 | + | 56956745 | 56956752 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr12 | + | 65705673 | 65705680 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr2 | + | 66154148 | 66154155 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr6 | + | 71810854 | 71810861 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr8 | + | 75593435 | 75593442 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr11 | + | 76776671 | 76776678 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr1 | + | 92159770 | 92159777 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr4 | + | 102859277 | 102859284 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr4 | + | 106395800 | 106395807 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr7 | + | 106735832 | 106735839 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr11 | + | 115950904 | 115950911 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr9 | + | 120807797 | 120807804 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr6 | + | 124678081 | 124678088 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr5 | + | 126400816 | 126400823 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr6 | + | 130274251 | 130274258 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr5 | + | 138866358 | 138866365 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr7 | + | 152048374 | 152048381 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr4 | + | 152853526 | 152853533 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr6 | + | 155770538 | 155770545 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr5 | + | 171067755 | 171067762 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr5 | + | 173101441 | 173101448 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr3 | + | 191155036 | 191155043 | 3.03e-05 | 0.294 | agtcttat |
AGTCTDAT | DREME-4 | chr17 | - | 3202128 | 3202135 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr18 | - | 3979212 | 3979219 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr18 | - | 6341924 | 6341931 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr12 | - | 24519962 | 24519969 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr11 | - | 31731840 | 31731847 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr14 | - | 38094129 | 38094136 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr2 | - | 43096079 | 43096086 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr2 | - | 46514918 | 46514925 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr4 | - | 55575706 | 55575713 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr6 | - | 56172313 | 56172320 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr15 | - | 58614569 | 58614576 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr11 | - | 59693118 | 59693125 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr15 | - | 59960535 | 59960542 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr17 | - | 66089966 | 66089973 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr8 | - | 66260973 | 66260980 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr14 | - | 66578505 | 66578512 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr7 | - | 71050682 | 71050689 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr12 | - | 71321740 | 71321747 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr9 | - | 75385457 | 75385464 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr15 | - | 77395593 | 77395600 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr1 | - | 85638595 | 85638602 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr6 | - | 95967782 | 95967789 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr6 | - | 118488841 | 118488848 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr1 | - | 118578629 | 118578636 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr5 | - | 125073269 | 125073276 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr4 | - | 127313956 | 127313963 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr7 | - | 150703395 | 150703402 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr5 | - | 150912633 | 150912640 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chrX | - | 154865121 | 154865128 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr2 | - | 186770487 | 186770494 | 3.03e-05 | 0.294 | AGTCTTAT |
AGTCTDAT | DREME-4 | chr10 | + | 16713082 | 16713089 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr6 | + | 17738051 | 17738058 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr6 | + | 22184583 | 22184590 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr16 | + | 25312155 | 25312162 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr13 | + | 29987524 | 29987531 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr9 | + | 35975026 | 35975033 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr14 | + | 36782100 | 36782107 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr12 | + | 41381085 | 41381092 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr12 | + | 42824505 | 42824512 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr21 | + | 45603498 | 45603505 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr21 | + | 45603677 | 45603684 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr6 | + | 54932827 | 54932834 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr14 | + | 60958210 | 60958217 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr7 | + | 67154560 | 67154567 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr6 | + | 71559188 | 71559195 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr5 | + | 71826277 | 71826284 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr7 | + | 77821210 | 77821217 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr1 | + | 81172675 | 81172682 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr7 | + | 88253823 | 88253830 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr10 | + | 91919848 | 91919855 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr6 | + | 92752309 | 92752316 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr8 | + | 122893202 | 122893209 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr7 | + | 135088742 | 135088749 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr2 | + | 169976628 | 169976635 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr2 | + | 169976746 | 169976753 | 6.05e-05 | 0.335 | agtctaat |
AGTCTDAT | DREME-4 | chr9 | - | 778166 | 778173 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr9 | - | 5315732 | 5315739 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr13 | - | 26437079 | 26437086 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr19 | - | 35184432 | 35184439 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr13 | - | 41925048 | 41925055 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr7 | - | 55797442 | 55797449 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr17 | - | 57249758 | 57249765 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr15 | - | 58614463 | 58614470 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr5 | - | 67345018 | 67345025 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr6 | - | 71811068 | 71811075 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr7 | - | 72657620 | 72657627 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr16 | - | 72904577 | 72904584 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr7 | - | 78248111 | 78248118 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr6 | - | 85829159 | 85829166 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr4 | - | 86879822 | 86879829 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr7 | - | 122103245 | 122103252 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr11 | - | 122538233 | 122538240 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr9 | - | 135828837 | 135828844 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr4 | - | 169377527 | 169377534 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr1 | - | 219726605 | 219726612 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr2 | - | 241085245 | 241085252 | 6.05e-05 | 0.335 | AGTCTAAT |
AGTCTDAT | DREME-4 | chr8 | + | 12783730 | 12783737 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr22 | - | 22997724 | 22997731 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr16 | + | 23830539 | 23830546 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr12 | + | 27477307 | 27477314 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr10 | + | 35257688 | 35257695 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr3 | - | 39302364 | 39302371 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr8 | + | 42029154 | 42029161 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr12 | - | 44728766 | 44728773 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr20 | + | 45234869 | 45234876 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr15 | - | 58699080 | 58699087 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr2 | - | 63273030 | 63273037 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr15 | + | 76465941 | 76465948 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr10 | + | 88176950 | 88176957 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr6 | + | 89916310 | 89916317 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr14 | - | 93520445 | 93520452 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr14 | + | 103265528 | 103265535 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr5 | - | 111898875 | 111898882 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr11 | - | 115950753 | 115950760 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr5 | - | 119666764 | 119666771 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr3 | + | 129100118 | 129100125 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr3 | + | 133723146 | 133723153 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr7 | + | 143236626 | 143236633 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr6 | + | 162935055 | 162935062 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr4 | + | 166377619 | 166377626 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr5 | - | 180938487 | 180938494 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr3 | + | 193954998 | 193955005 | 8.01e-05 | 0.354 | agtctgat |
AGTCTDAT | DREME-4 | chr2 | - | 222335088 | 222335095 | 8.01e-05 | 0.354 | AGTCTGAT |
AGTCTDAT | DREME-4 | chr18 | - | 10129166 | 10129173 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr19 | - | 40795302 | 40795309 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr20 | - | 41059572 | 41059579 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr22 | + | 42042043 | 42042050 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr12 | + | 46027366 | 46027373 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr22 | + | 47009203 | 47009210 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr4 | - | 61001397 | 61001404 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr14 | - | 80867996 | 80868003 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr15 | + | 101946271 | 101946278 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr3 | - | 108447501 | 108447508 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr6 | + | 125111430 | 125111437 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr5 | + | 138866168 | 138866175 | 9.96e-05 | 0.396 | agTCTCAT |
AGTCTDAT | DREME-4 | chr3 | + | 139537673 | 139537680 | 9.96e-05 | 0.396 | agtctcat |
AGTCTDAT | DREME-4 | chr7 | - | 144148323 | 144148330 | 9.96e-05 | 0.396 | AGTCTCAT |
AGTCTDAT | DREME-4 | chr1 | + | 155244740 | 155244747 | 9.96e-05 | 0.396 | AGTCTCAT |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif AGTCTDAT /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF791.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.