# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 ATAAATAAATAAATAAATAAATAAATAAAT MEME-1 ATAAATAAATAAATAAATAAATAAATAAAT 4.3e-121 5.7e-124 -283.79 0.0 33 471 123 135 0.07006 2.4e-126 235 1 TTTCTGCTGAGAAATCTRC MEME-2 TTTCTGCTGAGAAATCTRC 2.6e-149 3.4e-152 -348.77 0.0 92 482 307 371 0.19087 1.4e-154 240 1 TTCCCTTGTATGTGAY MEME-3 TTCCCTTGTATGTGAY 2.9e-207 3.8e-210 -482.20 0.0 85 485 348 388 0.17526 1.6e-212 242 2 ACATAYA DREME-1 ACATACA 2.1e-083 2.8e-086 -197.00 0.0 78 494 194 281 0.15789 1.1e-088 246 2 GATTTCTB DREME-2 GATTTCTC 1.4e-087 1.9e-090 -206.61 0.0 87 493 170 204 0.17647 7.5e-093 246 2 AGCAGHAA DREME-3 AGCAGMAA 1.7e-063 2.3e-066 -151.15 0.0 131 493 172 200 0.26572 9.2e-069 246 2 AGTCTDAT DREME-4 AGTCTWAT 6.3e-071 8.3e-074 -168.27 0.0 41 493 97 128 0.08316 3.4e-076 246 2 ATAAATAA DREME-5 ATAAATAA 3.8e-081 5.0e-084 -191.81 0.0 47 493 121 164 0.09533 2.0e-086 246 2 CAAGRGAA DREME-6 CAAGRGAA 6.9e-053 9.1e-056 -126.73 0.0 121 493 149 183 0.24544 3.7e-058 246 2 GGGAWYC DREME-7 GGGAWYC 2.0e-038 2.7e-041 -93.42 0.0 52 494 91 170 0.10526 1.1e-043 246 2 AGGCCAGR DREME-8 AGGCCAGR 1.5e-003 2.0e-006 -13.14 0.0 113 493 118 317 0.22921 8.0e-009 246 2 GTGACW DREME-9 GTGACW 1.2e-037 1.5e-040 -91.67 0.0 107 495 163 271 0.21616 6.2e-043 247 2 TTTTGARA DREME-10 TTTTGAGA 1.6e-016 2.1e-019 -43.02 0.0 145 493 138 230 0.29412 8.4e-022 246 2 GAGACYC DREME-11 GAGACTC 2.0e-002 2.7e-005 -10.52 0.0 98 494 51 125 0.19838 1.1e-007 246 2 AYTATCAG DREME-12 AYTATCAG 6.5e-040 8.6e-043 -96.86 0.0 51 493 60 75 0.10345 3.5e-045 246 2 AATRTGTC DREME-13 AATRTGTC 4.3e-020 5.7e-023 -51.21 0.0 219 493 101 110 0.44422 2.3e-025 246 2 AARGTTTC DREME-14 AARGTTTC 4.8e-031 6.3e-034 -76.44 0.0 137 493 103 125 0.27789 2.6e-036 246 2 ARTGGGAT DREME-15 AATGGGAT 9.7e-018 1.3e-020 -45.80 0.0 139 493 76 100 0.28195 5.2e-023 246 2 GCCTGYA DREME-16 GCCTGYA 3.1e-002 4.1e-005 -10.10 0.0 322 494 147 177 0.65182 1.7e-007 246 2 CCAGGAGA DREME-17 CCAGGAGA 2.6e-004 3.5e-007 -14.86 0.0 257 493 246 364 0.52130 1.4e-009 246 2 ACTTGWCA DREME-18 ACTTGWCA 3.9e-008 5.2e-011 -23.68 0.0 131 493 78 140 0.26572 2.1e-013 246 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 2.0e-004 2.7e-007 -15.12 0.0 236 492 307 500 0.47967 1.1e-009 245 3 M0307_1.02 (ENSG00000250542)_(Mus_musculus)_(DBD_1.00) WWACGTWD 2.9e0000 3.8e-003 -5.56 0.0 135 493 122 320 0.27383 1.6e-005 246 3 M0415_1.02 (KLF9)_(Mus_musculus)_(DBD_1.00) NTAACGGN 5.6e-001 7.5e-004 -7.20 0.0 57 493 86 450 0.11562 3.0e-006 246 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNH 5.3e-013 7.0e-016 -34.89 0.0 199 491 346 595 0.40530 2.9e-018 245 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 2.9e-003 3.8e-006 -12.48 0.0 411 491 537 586 0.83707 1.6e-008 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 3.6e-009 4.8e-012 -26.06 0.0 216 492 353 593 0.43902 2.0e-014 245 3 M0629_1.02 DMRT3 MATGTATCAAN 1.1e-001 1.4e-004 -8.87 0.0 264 490 333 515 0.53878 5.7e-007 244 3 M0633_1.02 DMRT2 KAATKTATWN 5.1e-014 6.7e-017 -37.23 0.0 155 491 279 560 0.31568 2.8e-019 245 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 6.0e-001 7.9e-004 -7.14 0.0 379 489 497 585 0.77505 3.2e-006 244 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 3.3e-009 4.3e-012 -26.16 0.0 35 491 97 587 0.07128 1.8e-014 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 2.1e0000 2.8e-003 -5.87 0.0 69 491 121 590 0.14053 1.2e-005 245 3 M0890_1.02 LHX6 NYAATCAN 1.8e-004 2.4e-007 -15.25 0.0 237 493 343 564 0.48073 9.7e-010 246 3 M0901_1.02 AC226150.2 CWTGTCAA 3.7e-002 4.9e-005 -9.93 0.0 165 493 253 579 0.33469 2.0e-007 246 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 4.2e0000 5.5e-003 -5.20 0.0 38 492 61 456 0.07724 2.3e-005 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 2.0e-001 2.7e-004 -8.23 0.0 37 493 66 469 0.07505 1.1e-006 246 3 M1266_1.02 (IRF6)_(Mus_musculus)_(DBD_1.00) NVNCGAWACY 7.6e-015 1.0e-017 -39.14 0.0 89 491 199 585 0.18126 4.1e-020 245 3 M1581_1.02 (CIC)_(Mus_musculus)_(DBD_1.00) NNTGCTGACW 2.7e-016 3.6e-019 -42.48 0.0 167 491 312 586 0.34012 1.5e-021 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 3.4e0000 4.5e-003 -5.40 0.0 58 490 96 529 0.11837 1.9e-005 244 3 M1594_1.02 (SOX12)_(Mus_musculus)_(DBD_1.00) HWTTGTYNNN 6.8e0000 9.0e-003 -4.71 0.0 161 491 241 593 0.32790 3.7e-005 245 3 M1928_1.02 NFKB1 KGGRMTTTCCM 1.9e-014 2.5e-017 -38.22 0.0 48 490 124 534 0.09796 1.0e-019 244 3 M2281_1.02 FOXH1 BNSAATCCACA 2.7e-001 3.6e-004 -7.94 0.0 274 490 335 506 0.55918 1.5e-006 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 2.2e-001 2.9e-004 -8.14 0.0 38 486 80 590 0.07819 1.2e-006 242 3 M2292_1.02 JUND DRTGASTCATS 4.0e0000 5.4e-003 -5.23 0.0 84 490 105 417 0.17143 2.2e-005 244 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 1.4e-022 1.9e-025 -56.92 0.0 168 486 327 575 0.34568 7.9e-028 242 3 M2313_1.02 (SOX6)_(Mus_musculus)_(DBD_1.00) CCWTTGTYYY 3.1e-007 4.2e-010 -21.60 0.0 159 491 265 569 0.32383 1.7e-012 245 3 M2319_1.02 TCF7L2 TBYCTTTGAWSTYN 1.0e0000 1.4e-003 -6.60 0.0 181 487 265 574 0.37166 5.6e-006 243 3 M2385_1.02 FOXP2 RWGTAAACAVR 8.7e0000 1.2e-002 -4.46 0.0 38 490 72 576 0.07755 4.8e-005 244 3 M2387_1.02 SREBF1 RTGGGGTGAB 2.8e-010 3.7e-013 -28.63 0.0 163 491 268 538 0.33198 1.5e-015 245 3 M2388_1.02 SREBF2 RTGGGGTGAY 3.9e-019 5.1e-022 -49.03 0.0 163 491 294 540 0.33198 2.1e-024 245 3 M4444_1.02 RELA DGGGRMTTTCCMVN 6.7e-012 8.8e-015 -32.36 0.0 47 487 114 514 0.09651 3.6e-017 243 3 M4452_1.02 BATF TYYYRWWATGASTCA 1.8e0000 2.4e-003 -6.01 0.0 76 486 125 550 0.15638 1.0e-005 242 3 M4473_1.02 PBX3 NBCDGCCAATSRGVR 7.8e0000 1.0e-002 -4.57 0.0 310 486 386 537 0.63786 4.3e-005 242 3 M4477_1.02 SRF NHATGNCCAWAWAAGGMMA 6.5e-009 8.6e-012 -25.48 0.0 78 482 148 498 0.16183 3.6e-014 240 3 M4509_1.02 POU5F1 ATYTGCATRACAAWGRV 5.6e0000 7.4e-003 -4.90 0.0 140 484 188 504 0.28926 3.1e-005 241 3 M4551_1.02 ZNF274 YTCAYACTGGAGAGAAA 3.8e-012 5.1e-015 -32.91 0.0 150 484 163 298 0.30992 2.1e-017 241 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 1.3e-011 1.8e-014 -31.66 0.0 266 486 326 441 0.54733 7.3e-017 242 3 M4623_1.02 JUNB NDRTGASTCATNYHY 1.5e0000 2.0e-003 -6.20 0.0 98 486 126 437 0.20165 8.4e-006 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 3.1e-036 4.1e-039 -88.39 0.0 90 484 210 452 0.18595 1.7e-041 241 3 M4680_1.02 BACH1 GTCACGTG 1.5e-005 2.0e-008 -17.74 0.0 71 493 132 524 0.14402 8.1e-011 246 3 M4681_1.02 BACH2 TGCTGAGTCA 6.7e-008 8.9e-011 -23.14 0.0 71 491 122 441 0.14460 3.6e-013 245 3 M4698_1.02 HNF4A BTGRMCTTTGVHCYB 2.4e-002 3.2e-005 -10.36 0.0 184 486 268 549 0.37860 1.3e-007 242 3 M5234_1.02 (SIM1)_(Drosophila_melanogaster)_(DBD_0.89) GGTCACGTAC 1.1e-025 1.4e-028 -64.13 0.0 105 491 170 340 0.21385 5.7e-031 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 1.2e-016 1.6e-019 -43.30 0.0 32 488 99 511 0.06557 6.5e-022 243 3 M5291_1.02 ARX YTAATTNRATTAN 3.4e-028 4.5e-031 -69.87 0.0 40 488 129 482 0.08197 1.9e-033 243 3 M5335_1.02 CUX2 ATCGATAWNWTTATYGAT 5.3e-079 7.0e-082 -186.87 0.0 43 483 126 189 0.08903 2.9e-084 241 3 M5348_1.02 DRGX NTAATYHAATTAN 2.9e-010 3.8e-013 -28.60 0.0 200 488 289 492 0.40984 1.6e-015 243 3 M5460_1.02 FOXL1 RTAAACA 5.0e-006 6.6e-009 -18.84 0.0 40 494 97 589 0.08097 2.7e-011 246 3 M5493_1.02 GMEB2 KTRCGTAA 6.8e-002 9.0e-005 -9.31 0.0 31 493 42 290 0.06288 3.7e-007 246 3 M5502_1.02 GSX1 NBTAATKRSN 5.7e-003 7.6e-006 -11.79 0.0 73 491 130 545 0.14868 3.1e-008 245 3 M5503_1.02 GSX2 DYTAATKRVN 1.2e-002 1.5e-005 -11.07 0.0 37 491 78 544 0.07536 6.3e-008 245 3 M5544_1.02 HOXC10 DTTTWATKDB 1.7e-002 2.3e-005 -10.70 0.0 67 491 126 581 0.13646 9.2e-008 245 3 M5583_1.02 ISL2 YTAAKTGC 8.7e-006 1.1e-008 -18.28 0.0 213 493 328 579 0.43205 4.7e-011 246 3 M5584_1.02 ISX YTAATCTAATTAR 9.0e-034 1.2e-036 -82.72 0.0 42 488 126 398 0.08607 4.9e-039 243 3 M5587_1.02 JDP2 ATGASTCAT 4.1e-001 5.5e-004 -7.51 0.0 98 492 109 360 0.19919 2.2e-006 245 3 M5602_1.02 LHX9 YTAATTRN 8.7e-001 1.1e-003 -6.77 0.0 37 493 72 554 0.07505 4.7e-006 246 3 M5621_1.02 MEIS3 SCTGTCAH 2.8e-013 3.7e-016 -35.53 0.0 199 493 344 591 0.40365 1.5e-018 246 3 M5689_1.02 NRL DWWNTGCTGAC 7.5e-024 1.0e-026 -59.87 0.0 164 490 331 592 0.33469 4.1e-029 244 3 M5697_1.02 ONECUT3 DTTATYGATTTTTT 3.3e-025 4.4e-028 -62.99 0.0 43 487 126 465 0.08830 1.8e-030 243 3 M5714_1.02 PHOX2A TAATYYAATTA 1.3e-010 1.7e-013 -29.40 0.0 30 490 82 505 0.06122 7.0e-016 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.8e-009 3.7e-012 -26.32 0.0 30 490 80 507 0.06122 1.5e-014 244 3 M5740_1.02 POU4F1 ATGMATAATTAATG 1.1e-016 1.5e-019 -43.37 0.0 39 487 111 514 0.08008 6.0e-022 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 4.0e-016 5.2e-019 -42.09 0.0 39 485 109 502 0.08041 2.2e-021 242 3 M5753_1.02 PROX1 YAAGACGYCTTA 8.5e-001 1.1e-003 -6.79 0.0 251 489 201 314 0.51329 4.6e-006 244 3 M5815_1.02 SOX14 ACAATAMCATTG 4.0e-004 5.3e-007 -14.46 0.0 179 489 145 266 0.36605 2.2e-009 244 3 M5889_1.02 TBX21 GGTGTGAHWTCACACC 2.9e0000 3.8e-003 -5.57 0.0 153 485 109 244 0.31546 1.6e-005 242 3 M5934_1.02 TGIF2 TGACASCTGTCA 6.0e0000 8.0e-003 -4.83 0.0 183 489 154 317 0.37423 3.3e-005 244 3 M5941_1.02 UNCX NTAATYBAATTAN 6.5e-004 8.6e-007 -13.97 0.0 46 488 94 538 0.09426 3.5e-009 243 3 M5972_1.02 ZNF410 GANTATTATGGGATGKM 5.0e-002 6.7e-005 -9.61 0.0 278 484 120 156 0.57438 2.8e-007 241 3 M6114_1.02 FOXA1 WAWGYAAAYA 6.4e-006 8.4e-009 -18.59 0.0 55 491 121 588 0.11202 3.4e-011 245 3 M6141_1.02 ALX1 TAATBYAATTAY 3.6e-003 4.8e-006 -12.25 0.0 199 489 278 528 0.40695 2.0e-008 244 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 9.6e-021 1.3e-023 -52.72 0.0 43 479 125 501 0.08977 5.3e-026 239 3 M6163_1.02 BPTF KKTBTTGTKKKS 3.1e0000 4.1e-003 -5.49 0.0 395 489 519 595 0.80777 1.7e-005 244 3 M6166_1.02 CDC5L RWTAYRTTAAMWCVC 6.0e-003 7.9e-006 -11.74 0.0 156 486 214 486 0.32099 3.3e-008 242 3 M6172_1.02 CEBPE VAKATTDCGHAA 1.2e-001 1.6e-004 -8.77 0.0 151 489 234 577 0.30879 6.4e-007 244 3 M6174_1.02 CEBPZ AGCCAATSAGH 5.3e-002 7.0e-005 -9.57 0.0 288 490 309 438 0.58776 2.9e-007 244 3 M6197_1.02 E4F1 YGTKACGTC 1.6e-003 2.2e-006 -13.04 0.0 100 492 113 335 0.20325 8.8e-009 245 3 M6228_1.02 FOSB CTGACTCAYV 1.9e-002 2.5e-005 -10.60 0.0 73 491 132 568 0.14868 1.0e-007 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 7.1e-010 9.4e-013 -27.69 0.0 46 488 117 583 0.09426 3.9e-015 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 1.1e0000 1.5e-003 -6.52 0.0 58 486 89 466 0.11934 6.1e-006 242 3 M6237_1.02 FOXD3 AAACAAACA 3.4e-008 4.5e-011 -23.83 0.0 44 492 109 586 0.08943 1.8e-013 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.1e-013 1.5e-016 -36.44 0.0 58 490 147 584 0.11837 6.1e-019 244 3 M6239_1.02 FOXF2 HWADGTAAACA 2.4e-010 3.2e-013 -28.78 0.0 56 490 133 571 0.11429 1.3e-015 244 3 M6240_1.02 FOXI1 RRCCAATCAVAR 5.1e-001 6.8e-004 -7.30 0.0 375 489 373 436 0.76687 2.8e-006 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 1.1e-021 1.4e-024 -54.89 0.0 37 491 126 583 0.07536 5.9e-027 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 1.7e-001 2.3e-004 -8.38 0.0 40 488 81 568 0.08197 9.5e-007 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 3.6e-003 4.7e-006 -12.26 0.0 190 488 300 598 0.38934 1.9e-008 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 1.1e-005 1.4e-008 -18.05 0.0 45 485 105 587 0.09278 6.0e-011 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 2.0e-004 2.6e-007 -15.17 0.0 46 488 103 590 0.09426 1.1e-009 243 3 M6250_1.02 FOXQ1 AAATAAACAATD 2.0e-007 2.7e-010 -22.03 0.0 41 489 95 526 0.08384 1.1e-012 244 3 M6257_1.02 GATA5 WVANWGATAABTYRRHD 2.2e0000 3.0e-003 -5.82 0.0 298 484 385 547 0.61570 1.2e-005 241 3 M6269_1.02 HBP1 AYYCATTGA 2.2e-001 2.9e-004 -8.14 0.0 286 492 375 551 0.58130 1.2e-006 245 3 M6272_1.02 HESX1 AKKYYAYKWGCCRSVT 5.6e-004 7.4e-007 -14.11 0.0 113 485 175 500 0.23299 3.1e-009 242 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 2.9e-015 3.9e-018 -40.09 0.0 45 487 119 518 0.09240 1.6e-020 243 3 M6296_1.02 HOXB6 KKCATMAATCAWT 1.1e-001 1.5e-004 -8.80 0.0 152 488 151 345 0.31148 6.2e-007 243 3 M6297_1.02 HOXB7 MATYAATCAA 9.9e-012 1.3e-014 -31.96 0.0 43 491 99 459 0.08758 5.4e-017 245 3 M6298_1.02 HOXB8 BMATTAATCAA 9.9e-009 1.3e-011 -25.06 0.0 44 490 93 451 0.08980 5.4e-014 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 3.7e-043 5.0e-046 -104.31 0.0 44 486 145 411 0.09053 2.1e-048 242 3 M6304_1.02 HOXD9 HMATNAAWYT 2.3e0000 3.0e-003 -5.80 0.0 207 491 282 551 0.42159 1.2e-005 245 3 M6312_1.02 IRF7 GAAASYGAAA 6.8e0000 9.0e-003 -4.71 0.0 171 491 248 578 0.34827 3.7e-005 245 3 M6327_1.02 LEF1 CTTTGWW 1.2e-008 1.6e-011 -24.89 0.0 186 494 307 581 0.37652 6.3e-014 246 3 M6329_1.02 LHX3 AAAATTAATTARY 4.5e-006 6.0e-009 -18.93 0.0 52 488 92 424 0.10656 2.5e-011 243 3 M6331_1.02 MAFB WGCTGACDS 3.6e0000 4.8e-003 -5.33 0.0 168 492 253 597 0.34146 2.0e-005 245 3 M6332_1.02 MAF KTGCTGAC 4.6e-005 6.1e-008 -16.62 0.0 167 493 276 595 0.33874 2.5e-010 246 3 M6333_1.02 MAFG HATGACT 1.5e-009 2.0e-012 -26.92 0.0 132 494 229 545 0.26721 8.3e-015 246 3 M6343_1.02 MEIS1 CDTWAAVCTGTCA 5.0e-012 6.6e-015 -32.65 0.0 248 488 368 535 0.50820 2.7e-017 243 3 M6344_1.02 MEIS2 KGACAVCTGTCAA 2.3e-003 3.0e-006 -12.71 0.0 312 488 394 522 0.63934 1.2e-008 243 3 M6359_1.02 NFE2L1 NATGACD 3.5e-004 4.6e-007 -14.59 0.0 166 494 264 580 0.33603 1.9e-009 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 6.9e-013 9.2e-016 -34.62 0.0 75 489 171 577 0.15337 3.8e-018 244 3 M6370_1.02 NFKB2 GRAATBYCCCT 1.2e-008 1.5e-011 -24.90 0.0 44 490 112 590 0.08980 6.3e-014 244 3 M6373_1.02 NFYC YAGCCAATSAGVGS 1.0e-001 1.4e-004 -8.91 0.0 297 487 382 537 0.60986 5.6e-007 243 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 4.7e-027 6.2e-030 -67.25 0.0 34 488 121 517 0.06967 2.6e-032 243 3 M6379_1.02 NKX3-2 WRYTAAGTGGV 2.2e0000 2.9e-003 -5.85 0.0 152 490 217 546 0.31020 1.2e-005 244 3 M6383_1.02 NR1H2 MGTTGACCTTTGACCTTTA 1.3e-001 1.7e-004 -8.70 0.0 276 482 68 82 0.57261 6.9e-007 240 3 M6391_1.02 NR2E3 TGACTTTTGACTTT 8.2e-011 1.1e-013 -29.85 0.0 191 487 323 577 0.39220 4.5e-016 243 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 2.5e-019 3.3e-022 -49.46 0.0 38 480 111 482 0.07917 1.4e-024 239 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 4.6e-012 6.0e-015 -32.74 0.0 113 483 216 545 0.23395 2.5e-017 241 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 7.2e-007 9.6e-010 -20.77 0.0 202 486 311 555 0.41564 4.0e-012 242 3 M6426_1.02 POU3F2 CATRAATWWT 2.9e-013 3.8e-016 -35.50 0.0 49 491 129 574 0.09980 1.6e-018 245 3 M6449_1.02 REL DKGGRNWTTCCV 1.3e-007 1.7e-010 -22.50 0.0 47 489 111 566 0.09611 6.9e-013 244 3 M6462_1.02 RXRG DTGACCTTTGACC 3.1e-007 4.1e-010 -21.62 0.0 260 488 280 397 0.53279 1.7e-012 243 3 M6470_1.02 SOX10 BCWTTGT 1.2e-020 1.6e-023 -52.49 0.0 166 494 325 595 0.33603 6.5e-026 246 3 M6472_1.02 SOX15 CWTTGTT 8.8e-013 1.2e-015 -34.39 0.0 186 494 317 571 0.37652 4.7e-018 246 3 M6474_1.02 SOX18 GGAMRAVAACAAWKBDWDS 2.0e-001 2.7e-004 -8.22 0.0 168 482 240 535 0.34855 1.1e-006 240 3 M6475_1.02 SOX2 WTTTGCATRACAAWGG 4.0e-001 5.4e-004 -7.53 0.0 167 485 251 572 0.34433 2.2e-006 242 3 M6476_1.02 SOX4 GAGAACAAAGSG 3.9e-003 5.2e-006 -12.17 0.0 173 489 266 571 0.35378 2.1e-008 244 3 M6507_1.02 TEAD1 YACATTCCWSHKSH 1.8e-006 2.3e-009 -19.87 0.0 89 487 174 586 0.18275 9.7e-012 243 3 M6519_1.02 TGIF1 MWGSTGACACCTSMCA 2.0e-015 2.6e-018 -40.49 0.0 163 485 304 580 0.33608 1.1e-020 242 3 M6537_1.02 YBX1 BSKGATTSSCY 8.9e-007 1.2e-009 -20.56 0.0 56 490 125 585 0.11429 4.8e-012 244 3 M6544_1.02 HIVEP1 VGGGATTTCCCA 9.8e-008 1.3e-010 -22.77 0.0 47 489 107 539 0.09611 5.3e-013 244 3 M6545_1.02 HIVEP2 GGYDGGGWAACYSS 5.2e0000 6.8e-003 -4.99 0.0 43 487 80 574 0.08830 2.8e-005 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 2.4e-019 3.1e-022 -49.51 0.0 40 490 111 465 0.08163 1.3e-024 244 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).