******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF785.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3:23917017-23917517 1.0000 100 chr6:149963666-149964166 1.0000 100 chr19:35392891-35393391 1.0000 100 chr1:19974679-19975179 1.0000 100 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1.0000 100 chr22:24010862-24011362 1.0000 100 chr12:130584385-13058488 1.0000 100 chr1:244918691-244919191 1.0000 100 chr9:97411663-97412163 1.0000 100 chr19:33274033-33274533 1.0000 100 chr22:46758687-46759187 1.0000 100 chr1:234723932-234724432 1.0000 100 chr19:36837854-36838354 1.0000 100 chr12:132710417-13271091 1.0000 100 chr5:93621365-93621865 1.0000 100 chr8:144456666-144457166 1.0000 100 chr5:36241720-36242220 1.0000 100 chr9:4984676-4985176 1.0000 100 chr18:55589737-55590237 1.0000 100 chr17:1258901-1259401 1.0000 100 chr4:82900703-82901203 1.0000 100 chr6:30907488-30907988 1.0000 100 chr10:25174260-25174760 1.0000 100 chr16:25258025-25258525 1.0000 100 chr1:44404966-44405466 1.0000 100 chr19:37594258-37594758 1.0000 100 chr3:134795191-134795691 1.0000 100 chr9:137240306-137240806 1.0000 100 chr19:37293505-37294005 1.0000 100 chr8:630616-631116 1.0000 100 chr17:81871322-81871822 1.0000 100 chr1:183471813-183472313 1.0000 100 chr17:77233781-77234281 1.0000 100 chr20:52972201-52972701 1.0000 100 chr21:39313558-39314058 1.0000 100 chr12:133129933-13313043 1.0000 100 chr16:3457819-3458319 1.0000 100 chr19:35947339-35947839 1.0000 100 chr10:91694173-91694673 1.0000 100 chr19:2945121-2945621 1.0000 100 chr10:93209005-93209505 1.0000 100 chr12:130764512-13076501 1.0000 100 chr1:32179613-32180113 1.0000 100 chr7:66920782-66921282 1.0000 100 chr19:36916362-36916862 1.0000 100 chr17:7014584-7015084 1.0000 100 chr1:7704909-7705409 1.0000 100 chr19:1383509-1384009 1.0000 100 chr19:49118750-49119250 1.0000 100 chr5:1950751-1951251 1.0000 100 chr1:235504677-235505177 1.0000 100 chr19:12782324-12782824 1.0000 100 chr2:36785160-36785660 1.0000 100 chr13:113490634-11349113 1.0000 100 chr8:41490066-41490566 1.0000 100 chr5:176591620-176592120 1.0000 100 chr1:3992036-3992536 1.0000 100 chr1:125179929-125180429 1.0000 100 chr6:28542767-28543267 1.0000 100 chr14:73825527-73826027 1.0000 100 chr7:2314610-2315110 1.0000 100 chr12:57111963-57112463 1.0000 100 chr19:41859745-41860245 1.0000 100 chr19:44259443-44259943 1.0000 100 chr10:100878423-10087892 1.0000 100 chr6:36680334-36680834 1.0000 100 chr17:45148395-45148895 1.0000 100 chr10:101830512-10183101 1.0000 100 chr19:2840899-2841399 1.0000 100 chr19:38224224-38224724 1.0000 100 chr1:31387481-31387981 1.0000 100 chr17:74514064-74514564 1.0000 100 chr17:40140151-40140651 1.0000 100 chr17:78558332-78558832 1.0000 100 chr19:5720466-5720966 1.0000 100 chr16:10808-11308 1.0000 100 chr19:33177275-33177775 1.0000 100 chr1:155244582-155245082 1.0000 100 chr1:228486541-228487041 1.0000 100 chr17:64649074-64649574 1.0000 100 chr1:236097030-236097530 1.0000 100 chr11:45771106-45771606 1.0000 100 chr5:140564341-140564841 1.0000 100 chr10:75235836-75236336 1.0000 100 chr15:73897315-73897815 1.0000 100 chr19:37594975-37595475 1.0000 100 chr19:12847530-12848030 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF785.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF785.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF785.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.194 C 0.306 G 0.306 T 0.194 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF785.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.199 C 0.301 G 0.301 T 0.199 ******************************************************************************** ******************************************************************************** MOTIF GTGTGTGTGTGTGTGT MEME-1 width = 16 sites = 148 llr = 2352 E-value = 1.5e-496 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::1:::::1::::1:: pos.-specific C ::::1::111:1:::: probability G a:9:919:819:9:a1 matrix T :9:a:9:8:819:9:8 bits 2.3 2.1 * 1.9 * 1.6 ** * * * * Relative 1.4 **** *** ***** Entropy 1.2 ******** ******* (22.9 bits) 0.9 **************** 0.7 **************** 0.5 **************** 0.2 **************** 0.0 ---------------- Multilevel GTGTGTGTGTGTGTGT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr17:40140151-40140651 - 3 1.66e-10 GTGTGTTGGG GTGTGTGTGTGTGTGT TG chr12:57111963-57112463 - 60 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT GGTGTTGTGA chr19:35947339-35947839 + 59 1.66e-10 GGCACTGTTC gtgtgtgtgtgtgtgt gtgtgtgtgt chr19:36837854-36838354 - 76 1.66e-10 CGGGAGCTT GTGTGTGTGTGTGTGT ATGTGTGTGT chr22:24010862-24011362 - 15 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT TGCGGGAGTG chr19:36851024-36851524 + 19 1.66e-10 TCCCCTTGGG GTGTGTGTGTGTGTGT TTACTACCAT chr1:161097502-161098002 + 36 1.66e-10 ctctctctct gtgtgtgtgtgtgtgt gtgtgtgtgt chr7:128360891-128361391 - 14 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT GAGAGAGAGA chr1:10793916-10794416 + 61 1.66e-10 atgtgtatgc gtgtgtgtgtgtgtgt gtgtgtgCGC chr22:35840363-35840863 + 69 1.66e-10 gcgtgtgtgc gtgtgtgtgtgtgtgt gtgtgtgtgt chr19:32745700-32746200 + 84 1.66e-10 TGGTCATTCT GTGTGTGTGTGTGTGT G chr19:47743202-47743702 + 16 1.66e-10 CGCGCGCGGG gtgtgtgtgtgtgtgt gtgtgtgtgt chr13:75480681-75481181 - 2 1.66e-10 CCGTGTGTGT GTGTGTGTGTGTGTGT G chr2:241881395-241881895 + 2 1.66e-10 t gtgtgtgtgtgtgtgt gtgtgtgtgt chr1:156661285-156661785 + 71 1.66e-10 GGCCCAGTCC gtgtgtgtgtgtgtgt gtgtgtgtgt chr19:40715622-40716122 + 25 1.66e-10 TTCTTTCTCt gtgtgtgtgtgtgtgt gtgtgtgtgC chr3:48087494-48087994 - 53 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT GCGCGTGCGT chr19:33796973-33797473 + 75 1.66e-10 CTGCCGCGCG gtgtgtgtgtgtgtgt gtgtgtgtgt chr16:981056-981556 + 28 1.66e-10 GAGACGGGCt gtgtgtgtgtgtgtgt gtgtgagaga chr3:58334727-58335227 + 2 1.66e-10 g gtgtgtgtgtgtgtgt gtgtgtgtgt chr1:226711204-226711704 + 39 1.66e-10 gagagagaga gtgtgtgtgtgtgtgt gtgtgtgtgt chr1:184386550-184387050 - 19 1.66e-10 GTGTGGGCAG GTGTGTGTGTGTGTGT ACGTGTGTGC chr10:91608959-91609459 - 45 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT GAGAGAGAGA chr19:47471971-47472471 - 24 1.66e-10 GTGTGTGCGT GTGTGTGTGTGTGTGT TGGGGGGCGG chr1:40374331-40374831 + 66 1.66e-10 GCGTGCGTGC gtgtgtgtgtgtgtgt gtgtgtgtgt chr6:96924554-96925054 - 49 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT GCCTGCGTGC chr19:8240365-8240865 + 21 1.66e-10 ATGTATGCAA gtgtgtgtgtgtgtgt gtgtgtgtgt chr3:168096033-168096533 + 17 1.66e-10 CGGTGAACAC gtgtgtgtgtgtgtgt gtgtgtgtgt chr15:65422263-65422763 - 57 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT TGGGAGTGCT chr12:122021704-12202220 + 28 1.66e-10 gtgtgtgtat gtgtgtgtgtgtgtgt gtgtgtgtgt chr6:31652090-31652590 - 31 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT TTGGCTGTGG chr9:133532941-133533441 + 24 1.66e-10 gtgtgtgcct gtgtgtgtgtgtgtgt gtgtgtgtgt chr19:39320102-39320602 - 4 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT CTG chr9:135967568-135968068 + 16 1.66e-10 GTGTGCAGGC gtgtgtgtgtgtgtgt gtgtgtgtgC chr9:87270343-87270843 + 1 1.66e-10 . gtgtgtgtgtgtgtgt GCCCACACAC chr4:24472673-24473173 + 49 1.66e-10 gggtgcgtgc gtgtgtgtgtgtgtgt gtgtgttgtg chr1:201435693-201436193 + 24 1.66e-10 GCGCGTGCCt gtgtgtgtgtgtgtgt gtgtgtgtgt chr12:990671-991171 + 64 1.66e-10 CGCAGGGGTC gtgtgtgtgtgtgtgt gagtgtgtgt chr1:21345612-21346112 + 74 1.66e-10 GCAGCTGCTt gtgtgtgtgtgtgtgt gtgtgtgtgt chr7:148921145-148921645 - 4 1.66e-10 TAGTGACTCT GTGTGTGTGTGTGTGT ATG chr6:139291842-139292342 - 46 1.66e-10 TGGCGTGTGT GTGTGTGTGTGTGTGT GCGCGCGCGT chr7:25856742-25857242 - 57 1.66e-10 GTGTGTGTGT GTGTGTGTGTGTGTGT CTCTCTCAGG chr2:85742459-85742959 + 63 1.66e-10 TTTCTGGGCt gtgtgtgtgtgtgtgt gtgtgtgtgt chr4:141133259-141133759 + 15 1.66e-10 ctgtatgttt gtgtgtgtgtgtgtgt gtgtgtATAA chr1:109910485-109910985 + 52 1.66e-10 gtctgtgtca gtgtgtgtgtgtgtgt gtgtatgtgt chr15:40092197-40092697 - 58 1.66e-10 AAGGGTGTGT GTGTGTGTGTGTGTGT GAGTCTGTGT chr4:3746647-3747147 + 27 1.66e-10 CTTTATGTCC gtgtgtgtgtgtgtgt gtgtgtgtgt chr4:182143958-182144458 - 46 1.66e-10 CCGTGTGTGT GTGTGTGTGTGTGTGT GCGGGAGTGT chr5:93582537-93583037 + 41 2.75e-10 GTAAgtgtgt gtgtgtgtatgtgtgt gtgtgtgtgA chr20:52972201-52972701 + 26 3.85e-10 gcgagggtgt gtgtgtgtgtttgtgt gtgtgtgcat chr1:236101323-236101823 + 15 3.85e-10 tgagtgtgtg gtgtgtgtgtttgtgt gttatgtagg chr19:30701035-30701535 - 8 3.85e-10 CTGTGTGTTT GTGTGTGTGTTTGTGT TTGTGTG chr22:45290267-45290767 + 8 3.85e-10 tgtctat gtgtgtgtgtttgtgt tgcgtgtggc chr16:30045348-30045848 + 48 3.85e-10 gtggtgagtg gtgtgtgtgtttgtgt ggtgtgtgtg chr2:219571730-219572230 + 25 6.60e-10 ACCTCTGGAt gtgtctgtgtgtgtgt gtgtgagaga chr2:43210664-43211164 - 31 8.26e-10 GTGGGAAGGG GTGTGTGTGTGTGAGT GCGTGAGGCT chr2:45650858-45651358 - 13 8.26e-10 GTGTGTGTGA GTGTGTGTGTGTGAGT GTGTGTGTGT chrX:156008781-156009281 + 84 9.92e-10 gtgtgtttgt gtgtgtgtctgtgtgt g chr16:66603874-66604374 + 71 9.92e-10 gcgcgcgtgt gtgtgtgtctgtgtgt gtgCCTGGAG chr19:37594975-37595475 + 31 1.24e-09 GGCCAtgtgt gtgtgtgtgcgtgtgt gtgtgggtct chr14:103105049-10310554 + 12 1.24e-09 GAGTTGGGGG GTGTGTGTGCGTGTGT GATGGAGCTG chr22:45291306-45291806 + 52 1.24e-09 gagtgtggca gtgtgtgtgcgtgtgt aagagtttga chr20:57748605-57749105 + 74 1.24e-09 TGGGCTCtgc gtgtgtgtgcgtgtgt gtgtgcgcgc chr3:134795191-134795691 - 14 1.46e-09 GGGTGTGCAT GTGTGTGTGTGTGTTT ATGGGAGAGG chr8:16825854-16826354 - 39 1.46e-09 TTTTTAATGT GTGTGTGTGTGTATGT CTGTGTGTGT chr1:202205454-202205954 - 76 1.46e-09 TTGAAGGAG GTGTGTGTGTGTGTTT GAAGAAGGTG chr19:37371123-37371623 + 78 3.60e-09 TTGTGTCACT GTGTGTGTGTGTTTGT GCGCGTG chr22:45979332-45979832 - 50 4.86e-09 TTTGTGTGTG GTGTATGTGTGTGTGT TGTGTGTGGT chr16:89489012-89489512 - 1 4.86e-09 GCGCGCGCGC GCGTGTGTGTGTGTGT chr19:33506188-33506688 - 40 4.86e-09 TGAGTGTGTT GTGTGTGGGTGTGTGT AGTGTGTAGG chr12:132951527-13295202 - 81 5.04e-09 TGGT GTATGTGTATGTGTGT GATGTGTGAT chr19:41230377-41230877 + 51 7.77e-09 gtgtgtctat gtgtgtgtatgagtgt gtctgtctct chr19:33249720-33250220 - 40 8.54e-09 CATGTGGTGT GTATCTGTGTGTGTGT GAGATGTGTG chr1:240562781-240563281 + 51 8.54e-09 gtgtgtatat gagtgtgtatgtgtgt atgtgtatag chr22:24244142-24244642 - 7 8.54e-09 GAGTGTGGGT GTGTGTGAATGTGTGT GATTGT chr12:122094905-12209540 + 16 9.21e-09 tgtgtgtggg gtgtgggtatgtgtgt ggtgtctgtg chr12:84912607-84913107 + 11 1.01e-08 gcgcgcgcgc gtgtgtgtatgtgtga gggtgtgACG chr19:33274033-33274533 + 82 1.12e-08 gtgtgagtct gtgtctgtctgtgtgt gca chr19:31464721-31465221 + 5 1.20e-08 TGTG TTGTGTGTATGTGTGT AGTGGTTTGT chr3:194352620-194353120 + 40 1.31e-08 gtgtgttggg gtatgtgtgtgtgtgg tgtgtggtga chr1:44404966-44405466 + 1 1.51e-08 . gtatgtgtgtgagtgt gagagaatgt chr10:46525839-46526339 - 61 1.51e-08 GGTGTGTGTA GTGTGTGTGGTTGTGT GTAGTGTGTG chr19:6532183-6532683 + 18 1.71e-08 gtgtgtgttc gtgtgggtgtttgtgt ttgttcgttc chr19:35392891-35393391 + 19 1.71e-08 gtgtctccat gtgtgtgtctgtatgt ctctgtgtgc chr15:30173017-30173517 + 6 1.96e-08 gtgtg gtgtgtgtctgtgtgg tgtgtgtggc chr12:1605005-1605505 + 28 1.96e-08 gggggagggt gtgtgtgtgtgagagt gagtgtatgt chr16:57628751-57629251 + 5 2.27e-08 gaga gtgtgtgagtgtgagt gtgtgagagt chr10:101830512-10183101 - 54 2.64e-08 GCCCGCGCGC GTGTGTGTGTGTATGG GGAGGCGTGC chr19:36572857-36573357 - 37 3.01e-08 CGTCATTGTG GTGTGTGTGTGTGAGA GACGGAGACC chr12:70242784-70243284 - 8 3.45e-08 GTTCGTGTTT GTGTTTGTGTTTGTGT TGGACAC chr12:124567588-12456808 - 30 4.48e-08 TCGCGCCCAA GTGTGTGCGTGCGTGT CTGTGTGTGT chr3:194134801-194135301 - 54 4.48e-08 GGGAGGATGT GTGTGTGCGTGCGTGT GTGAGTGAGT chr18:63091716-63092216 + 67 4.48e-08 aatgggtgtg gtgtgtgtgagtgtgg tgtggtatgt chr19:36916362-36916862 + 83 5.03e-08 tagtgtgggt gtgtggttgtgtgtgt ga chr19:36528711-36529211 + 39 5.03e-08 tcctagcaca gtgtgtgtgtgattgt gattgtgtgt chr19:36772274-36772774 - 75 5.62e-08 TGCGCGCCCG GAGTGGGTGTGTGTGT CCTGGACGAC chr5:6447839-6448339 - 33 7.77e-08 TGTGTGAGTA GTGTGTGTAATTGTGT GTAGTGTGTG chr1:235078129-235078629 + 68 9.33e-08 tgttatgtgt gtatgagtatgtgtgt tgtgtgtgtt chr7:66920782-66921282 - 31 1.00e-07 GTCTGGTGTT GTGCGTGTGCGTGTGT GCGTAGTGCG chr22:39563942-39564442 + 81 1.06e-07 gtgtgtaatc gtgtgtctgtgtatgt gatt chr19:33250574-33251074 - 84 1.23e-07 T GTATCTGTGTGTGTGG TGTGAGTGTG chr22:45979940-45980440 - 80 1.23e-07 GTGTG GTGTGTTCATGTGTGT TATGTCTAAT chr7:157432922-157433422 - 66 1.33e-07 GAGTGTGCAT GTGTGTGCATGCGTGT GTGCGTGCCT chr8:28401274-28401774 + 15 1.33e-07 tgtgtgtgac gcgtgtgtacgtgtgt atgcgcacgt chr12:6689011-6689511 - 58 1.43e-07 CGCGCGTTCC GTGCGTGTGAGTGTGT GGGTCTGTCT chr18:49019490-49019990 + 83 1.55e-07 ggtgtgtgtg gtatgtgagtgtgagt ga chr19:30170757-30171257 + 29 1.69e-07 gaatgtgcaa gtgtgtgtaggtgtga gtaggtgcgt chr19:33458234-33458734 + 49 1.84e-07 tgtgggggtt gtgtgtggaggtgtgt atgtgtggcg chr19:47229140-47229640 - 38 2.20e-07 AGGTCTGATG GCATGTGTCTGTGTGT GCCTGATCTA chr19:36488978-36489478 - 79 2.41e-07 CTGCTG GTGTGTGTGTGAGAGG GAGCAGGACC chr1:236085585-236086085 + 14 2.41e-07 cacgtgtctg gtgtgtgcatatgtgt gctgtatgta chr9:129340475-129340975 + 73 2.91e-07 gttggtgtgt gtgtgagtccgtgtgt gagttggcat chr19:42283336-42283836 + 6 3.55e-07 AAagt gtgtctgtatgtctgt gaggagtgtg chr10:133010670-13301117 + 13 3.55e-07 TTTGTGTGAT GTGTGTTAGCGTGTGT GATGTGTGCT chr19:461959-462459 + 85 3.91e-07 GGTGTACGCT GTGTCTGGGTGCGTGT chr21:45590977-45591477 - 78 3.91e-07 GTTGTGT GTATCTCTGTGTGTGT GCCCACGCAT chr9:136307196-136307696 - 84 6.28e-07 T GTGTTTGTGTGTGTTG TGTGGTGTGG chr16:85522953-85523453 + 39 7.49e-07 tgtctgccct gtgtgtgtgcacgtgt gcctgtggct chr12:8697809-8698309 + 14 8.15e-07 AGGAGCGGCC gggtgtgagtgtgtgg gagtgagagt chr3:52239123-52239623 + 29 8.15e-07 GAGGACGCGC GTGTGTGTCTGTGCGC CCTGATCACG chr16:30894179-30894679 + 59 9.61e-07 GCTGTGTGTG GAGTGCGTGCGTGTGT CCGCCCTCGC chr1:228782509-228783009 + 10 9.61e-07 tgtggtgtg gtgtaggtgtgtgtga tgcctggtgt chr19:37293505-37294005 - 77 1.20e-06 CGCGCGCA GTGCGTGTCTGTGTGC CGACTTCTGT chr19:6717434-6717934 + 19 1.20e-06 gttgtgtgtg gtgtggttatgtatgt tgtgttgtgt chr22:50628636-50629136 + 18 1.29e-06 tgtttgaggg gtgtgtgtggttgagg tgtatggtgg chr12:132156858-13215735 - 30 2.16e-06 TGTGTGTAGT GTGTGTGTAGTGGTGT AGTGTGTGCC chr19:38224224-38224724 - 55 2.33e-06 GTGAGTATCC GCGTGAATGTGTGTGT AAACTGCCAT chr1:31387481-31387981 - 48 2.94e-06 CTGTGTGGAT GTGTCTGGGGGTGTGG ATGGTGAGGT chr1:28648581-28649081 + 29 2.94e-06 AAGAGATTCT GTGTGTGTTTTTTTTT TTTTTTAGAG chr21:38660624-38661124 + 39 3.43e-06 GCGCGTGTCC GTGTGCGCGTGGGTGT GGGTGTGCTC chr19:56393604-56394104 + 39 3.43e-06 GGCCGTCACT GTGTGTGCGTGATTTT GACAGTGTGT chr15:72320165-72320665 + 3 3.70e-06 GA GTGTGTGCGGGCGTGG CCGTGGATCG chr19:36604656-36605156 - 78 3.70e-06 CGTCCGT GTGTGGTGGTGTGAGT GGGCGCGCCT chr2:230864456-230864956 + 50 3.70e-06 Atgagtgagc gagtgagtgagtgagt gagtgagcga chr15:74546117-74546617 + 68 4.00e-06 CAGCTGGCCA GCGTCTGCGTGTGTGC GGTCGTTCCT chr5:43192531-43193031 + 42 4.00e-06 GTGGACACTC GTGTCTGCGTGCGCGT CCACACGTGA chr22:49975425-49975925 + 85 4.31e-06 ggtgtgtgct gtgtgtggtgttgtgt chr1:29237080-29237580 + 9 4.65e-06 TCCGGAAC gtgtgtgtccgtgcgc tgtgtacgtg chr1:111990062-111990562 + 85 5.39e-06 GTACCGACGC GGGTGTGAGCGCGTGT chr15:84570943-84571443 + 84 6.24e-06 AACCACCAAC TGGTGTGTGTGTATTT A chr19:53554104-53554604 + 46 6.69e-06 CATGCGTTGG GGGTCTGTGTGCGCGT ACACGTGCAT chr1:52553220-52553720 - 5 7.18e-06 CCTTCCCTCC GCGTGGGTGTGAGTGC GCGA chr12:49967394-49967894 - 85 8.24e-06 . GTGTGCGCGCGTGTGC ACGGGACTTT chr1:244918691-244919191 - 15 9.42e-06 ACGTGGCGCG GTGTGGGTGTGCGCGC CCCCGAGCTG chr1:31937361-31937861 - 74 9.42e-06 GGGCAGGGGA GGGTATGGGTGTGTGG GGAGCGTGTG chr7:2314610-2315110 - 24 1.31e-05 GTGGGTGAGC GAATGAGTGGGTGAGT GGATGAATGA chr5:1950751-1951251 + 32 1.31e-05 TGTGCGTGTG TCATCTGTGCGTGTGT CATCTGCTGT chr19:434104-434604 + 22 1.49e-05 ctgagatcat gagtctgtgagtgaga tcatgagtga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:40140151-40140651 1.7e-10 2_[-1]_82 chr12:57111963-57112463 1.7e-10 59_[-1]_25 chr19:35947339-35947839 1.7e-10 58_[+1]_26 chr19:36837854-36838354 1.7e-10 75_[-1]_9 chr22:24010862-24011362 1.7e-10 14_[-1]_70 chr19:36851024-36851524 1.7e-10 18_[+1]_66 chr1:161097502-161098002 1.7e-10 35_[+1]_49 chr7:128360891-128361391 1.7e-10 13_[-1]_71 chr1:10793916-10794416 1.7e-10 60_[+1]_24 chr22:35840363-35840863 1.7e-10 68_[+1]_16 chr19:32745700-32746200 1.7e-10 83_[+1]_1 chr19:47743202-47743702 1.7e-10 15_[+1]_69 chr13:75480681-75481181 1.7e-10 1_[-1]_83 chr2:241881395-241881895 1.7e-10 1_[+1]_83 chr1:156661285-156661785 1.7e-10 70_[+1]_14 chr19:40715622-40716122 1.7e-10 24_[+1]_60 chr3:48087494-48087994 1.7e-10 52_[-1]_32 chr19:33796973-33797473 1.7e-10 74_[+1]_10 chr16:981056-981556 1.7e-10 27_[+1]_57 chr3:58334727-58335227 1.7e-10 1_[+1]_83 chr1:226711204-226711704 1.7e-10 38_[+1]_46 chr1:184386550-184387050 1.7e-10 18_[-1]_66 chr10:91608959-91609459 1.7e-10 44_[-1]_40 chr19:47471971-47472471 1.7e-10 23_[-1]_61 chr1:40374331-40374831 1.7e-10 65_[+1]_19 chr6:96924554-96925054 1.7e-10 48_[-1]_36 chr19:8240365-8240865 1.7e-10 20_[+1]_64 chr3:168096033-168096533 1.7e-10 16_[+1]_68 chr15:65422263-65422763 1.7e-10 56_[-1]_28 chr12:122021704-12202220 1.7e-10 27_[+1]_57 chr6:31652090-31652590 1.7e-10 30_[-1]_54 chr9:133532941-133533441 1.7e-10 23_[+1]_61 chr19:39320102-39320602 1.7e-10 3_[-1]_81 chr9:135967568-135968068 1.7e-10 15_[+1]_69 chr9:87270343-87270843 1.7e-10 [+1]_84 chr4:24472673-24473173 1.7e-10 48_[+1]_36 chr1:201435693-201436193 1.7e-10 23_[+1]_61 chr12:990671-991171 1.7e-10 63_[+1]_21 chr1:21345612-21346112 1.7e-10 73_[+1]_11 chr7:148921145-148921645 1.7e-10 3_[-1]_81 chr6:139291842-139292342 1.7e-10 45_[-1]_39 chr7:25856742-25857242 1.7e-10 56_[-1]_28 chr2:85742459-85742959 1.7e-10 62_[+1]_22 chr4:141133259-141133759 1.7e-10 14_[+1]_70 chr1:109910485-109910985 1.7e-10 51_[+1]_33 chr15:40092197-40092697 1.7e-10 57_[-1]_27 chr4:3746647-3747147 1.7e-10 26_[+1]_58 chr4:182143958-182144458 1.7e-10 45_[-1]_39 chr5:93582537-93583037 2.8e-10 40_[+1]_44 chr20:52972201-52972701 3.8e-10 25_[+1]_59 chr1:236101323-236101823 3.8e-10 14_[+1]_70 chr19:30701035-30701535 3.8e-10 7_[-1]_77 chr22:45290267-45290767 3.8e-10 7_[+1]_77 chr16:30045348-30045848 3.8e-10 47_[+1]_37 chr2:219571730-219572230 6.6e-10 24_[+1]_60 chr2:43210664-43211164 8.3e-10 30_[-1]_54 chr2:45650858-45651358 8.3e-10 12_[-1]_72 chrX:156008781-156009281 9.9e-10 83_[+1]_1 chr16:66603874-66604374 9.9e-10 70_[+1]_14 chr19:37594975-37595475 1.2e-09 30_[+1]_54 chr14:103105049-10310554 1.2e-09 11_[+1]_73 chr22:45291306-45291806 1.2e-09 51_[+1]_33 chr20:57748605-57749105 1.2e-09 73_[+1]_11 chr3:134795191-134795691 1.5e-09 13_[-1]_71 chr8:16825854-16826354 1.5e-09 38_[-1]_46 chr1:202205454-202205954 1.5e-09 75_[-1]_9 chr19:37371123-37371623 3.6e-09 77_[+1]_7 chr22:45979332-45979832 4.9e-09 49_[-1]_35 chr16:89489012-89489512 4.9e-09 [-1]_84 chr19:33506188-33506688 4.9e-09 39_[-1]_45 chr12:132951527-13295202 5e-09 80_[-1]_4 chr19:41230377-41230877 7.8e-09 50_[+1]_34 chr19:33249720-33250220 8.5e-09 39_[-1]_45 chr1:240562781-240563281 8.5e-09 50_[+1]_34 chr22:24244142-24244642 8.5e-09 6_[-1]_78 chr12:122094905-12209540 9.2e-09 15_[+1]_69 chr12:84912607-84913107 1e-08 10_[+1]_74 chr19:33274033-33274533 1.1e-08 81_[+1]_3 chr19:31464721-31465221 1.2e-08 4_[+1]_80 chr3:194352620-194353120 1.3e-08 39_[+1]_45 chr1:44404966-44405466 1.5e-08 [+1]_84 chr10:46525839-46526339 1.5e-08 60_[-1]_24 chr19:6532183-6532683 1.7e-08 17_[+1]_67 chr19:35392891-35393391 1.7e-08 18_[+1]_66 chr15:30173017-30173517 2e-08 5_[+1]_79 chr12:1605005-1605505 2e-08 27_[+1]_57 chr16:57628751-57629251 2.3e-08 4_[+1]_80 chr10:101830512-10183101 2.6e-08 53_[-1]_31 chr19:36572857-36573357 3e-08 36_[-1]_48 chr12:70242784-70243284 3.4e-08 7_[-1]_77 chr12:124567588-12456808 4.5e-08 29_[-1]_55 chr3:194134801-194135301 4.5e-08 53_[-1]_31 chr18:63091716-63092216 4.5e-08 66_[+1]_18 chr19:36916362-36916862 5e-08 82_[+1]_2 chr19:36528711-36529211 5e-08 38_[+1]_46 chr19:36772274-36772774 5.6e-08 74_[-1]_10 chr5:6447839-6448339 7.8e-08 32_[-1]_52 chr1:235078129-235078629 9.3e-08 67_[+1]_17 chr7:66920782-66921282 1e-07 30_[-1]_54 chr22:39563942-39564442 1.1e-07 80_[+1]_4 chr19:33250574-33251074 1.2e-07 83_[-1]_1 chr22:45979940-45980440 1.2e-07 79_[-1]_5 chr7:157432922-157433422 1.3e-07 65_[-1]_19 chr8:28401274-28401774 1.3e-07 14_[+1]_70 chr12:6689011-6689511 1.4e-07 57_[-1]_27 chr18:49019490-49019990 1.6e-07 82_[+1]_2 chr19:30170757-30171257 1.7e-07 28_[+1]_56 chr19:33458234-33458734 1.8e-07 48_[+1]_36 chr19:47229140-47229640 2.2e-07 37_[-1]_47 chr19:36488978-36489478 2.4e-07 78_[-1]_6 chr1:236085585-236086085 2.4e-07 13_[+1]_71 chr9:129340475-129340975 2.9e-07 72_[+1]_12 chr19:42283336-42283836 3.6e-07 5_[+1]_79 chr10:133010670-13301117 3.6e-07 12_[+1]_72 chr19:461959-462459 3.9e-07 84_[+1] chr21:45590977-45591477 3.9e-07 77_[-1]_7 chr9:136307196-136307696 6.3e-07 83_[-1]_1 chr16:85522953-85523453 7.5e-07 38_[+1]_46 chr12:8697809-8698309 8.1e-07 13_[+1]_71 chr3:52239123-52239623 8.1e-07 28_[+1]_56 chr16:30894179-30894679 9.6e-07 58_[+1]_26 chr1:228782509-228783009 9.6e-07 9_[+1]_75 chr19:37293505-37294005 1.2e-06 76_[-1]_8 chr19:6717434-6717934 1.2e-06 18_[+1]_66 chr22:50628636-50629136 1.3e-06 17_[+1]_67 chr12:132156858-13215735 2.2e-06 29_[-1]_55 chr19:38224224-38224724 2.3e-06 54_[-1]_30 chr1:31387481-31387981 2.9e-06 47_[-1]_37 chr1:28648581-28649081 2.9e-06 28_[+1]_56 chr21:38660624-38661124 3.4e-06 38_[+1]_46 chr19:56393604-56394104 3.4e-06 38_[+1]_46 chr15:72320165-72320665 3.7e-06 2_[+1]_82 chr19:36604656-36605156 3.7e-06 77_[-1]_7 chr2:230864456-230864956 3.7e-06 49_[+1]_35 chr15:74546117-74546617 4e-06 67_[+1]_17 chr5:43192531-43193031 4e-06 41_[+1]_43 chr22:49975425-49975925 4.3e-06 84_[+1] chr1:29237080-29237580 4.7e-06 8_[+1]_76 chr1:111990062-111990562 5.4e-06 84_[+1] chr15:84570943-84571443 6.2e-06 83_[+1]_1 chr19:53554104-53554604 6.7e-06 45_[+1]_39 chr1:52553220-52553720 7.2e-06 4_[-1]_80 chr12:49967394-49967894 8.2e-06 84_[-1] chr1:244918691-244919191 9.4e-06 14_[-1]_70 chr1:31937361-31937861 9.4e-06 73_[-1]_11 chr7:2314610-2315110 1.3e-05 23_[-1]_61 chr5:1950751-1951251 1.3e-05 31_[+1]_53 chr19:434104-434604 1.5e-05 21_[+1]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGTGTGTGTGTGTGT width=16 seqs=148 chr17:40140151-40140651 ( 3) GTGTGTGTGTGTGTGT 1 chr12:57111963-57112463 ( 60) GTGTGTGTGTGTGTGT 1 chr19:35947339-35947839 ( 59) GTGTGTGTGTGTGTGT 1 chr19:36837854-36838354 ( 76) GTGTGTGTGTGTGTGT 1 chr22:24010862-24011362 ( 15) GTGTGTGTGTGTGTGT 1 chr19:36851024-36851524 ( 19) GTGTGTGTGTGTGTGT 1 chr1:161097502-161098002 ( 36) GTGTGTGTGTGTGTGT 1 chr7:128360891-128361391 ( 14) GTGTGTGTGTGTGTGT 1 chr1:10793916-10794416 ( 61) GTGTGTGTGTGTGTGT 1 chr22:35840363-35840863 ( 69) GTGTGTGTGTGTGTGT 1 chr19:32745700-32746200 ( 84) GTGTGTGTGTGTGTGT 1 chr19:47743202-47743702 ( 16) GTGTGTGTGTGTGTGT 1 chr13:75480681-75481181 ( 2) GTGTGTGTGTGTGTGT 1 chr2:241881395-241881895 ( 2) GTGTGTGTGTGTGTGT 1 chr1:156661285-156661785 ( 71) GTGTGTGTGTGTGTGT 1 chr19:40715622-40716122 ( 25) GTGTGTGTGTGTGTGT 1 chr3:48087494-48087994 ( 53) GTGTGTGTGTGTGTGT 1 chr19:33796973-33797473 ( 75) GTGTGTGTGTGTGTGT 1 chr16:981056-981556 ( 28) GTGTGTGTGTGTGTGT 1 chr3:58334727-58335227 ( 2) GTGTGTGTGTGTGTGT 1 chr1:226711204-226711704 ( 39) GTGTGTGTGTGTGTGT 1 chr1:184386550-184387050 ( 19) GTGTGTGTGTGTGTGT 1 chr10:91608959-91609459 ( 45) GTGTGTGTGTGTGTGT 1 chr19:47471971-47472471 ( 24) GTGTGTGTGTGTGTGT 1 chr1:40374331-40374831 ( 66) GTGTGTGTGTGTGTGT 1 chr6:96924554-96925054 ( 49) GTGTGTGTGTGTGTGT 1 chr19:8240365-8240865 ( 21) GTGTGTGTGTGTGTGT 1 chr3:168096033-168096533 ( 17) GTGTGTGTGTGTGTGT 1 chr15:65422263-65422763 ( 57) GTGTGTGTGTGTGTGT 1 chr12:122021704-12202220 ( 28) GTGTGTGTGTGTGTGT 1 chr6:31652090-31652590 ( 31) GTGTGTGTGTGTGTGT 1 chr9:133532941-133533441 ( 24) GTGTGTGTGTGTGTGT 1 chr19:39320102-39320602 ( 4) GTGTGTGTGTGTGTGT 1 chr9:135967568-135968068 ( 16) GTGTGTGTGTGTGTGT 1 chr9:87270343-87270843 ( 1) GTGTGTGTGTGTGTGT 1 chr4:24472673-24473173 ( 49) GTGTGTGTGTGTGTGT 1 chr1:201435693-201436193 ( 24) GTGTGTGTGTGTGTGT 1 chr12:990671-991171 ( 64) GTGTGTGTGTGTGTGT 1 chr1:21345612-21346112 ( 74) GTGTGTGTGTGTGTGT 1 chr7:148921145-148921645 ( 4) GTGTGTGTGTGTGTGT 1 chr6:139291842-139292342 ( 46) GTGTGTGTGTGTGTGT 1 chr7:25856742-25857242 ( 57) GTGTGTGTGTGTGTGT 1 chr2:85742459-85742959 ( 63) GTGTGTGTGTGTGTGT 1 chr4:141133259-141133759 ( 15) GTGTGTGTGTGTGTGT 1 chr1:109910485-109910985 ( 52) GTGTGTGTGTGTGTGT 1 chr15:40092197-40092697 ( 58) GTGTGTGTGTGTGTGT 1 chr4:3746647-3747147 ( 27) GTGTGTGTGTGTGTGT 1 chr4:182143958-182144458 ( 46) GTGTGTGTGTGTGTGT 1 chr5:93582537-93583037 ( 41) GTGTGTGTATGTGTGT 1 chr20:52972201-52972701 ( 26) GTGTGTGTGTTTGTGT 1 chr1:236101323-236101823 ( 15) GTGTGTGTGTTTGTGT 1 chr19:30701035-30701535 ( 8) GTGTGTGTGTTTGTGT 1 chr22:45290267-45290767 ( 8) GTGTGTGTGTTTGTGT 1 chr16:30045348-30045848 ( 48) GTGTGTGTGTTTGTGT 1 chr2:219571730-219572230 ( 25) GTGTCTGTGTGTGTGT 1 chr2:43210664-43211164 ( 31) GTGTGTGTGTGTGAGT 1 chr2:45650858-45651358 ( 13) GTGTGTGTGTGTGAGT 1 chrX:156008781-156009281 ( 84) GTGTGTGTCTGTGTGT 1 chr16:66603874-66604374 ( 71) GTGTGTGTCTGTGTGT 1 chr19:37594975-37595475 ( 31) GTGTGTGTGCGTGTGT 1 chr14:103105049-10310554 ( 12) GTGTGTGTGCGTGTGT 1 chr22:45291306-45291806 ( 52) GTGTGTGTGCGTGTGT 1 chr20:57748605-57749105 ( 74) GTGTGTGTGCGTGTGT 1 chr3:134795191-134795691 ( 14) GTGTGTGTGTGTGTTT 1 chr8:16825854-16826354 ( 39) GTGTGTGTGTGTATGT 1 chr1:202205454-202205954 ( 76) GTGTGTGTGTGTGTTT 1 chr19:37371123-37371623 ( 78) GTGTGTGTGTGTTTGT 1 chr22:45979332-45979832 ( 50) GTGTATGTGTGTGTGT 1 chr16:89489012-89489512 ( 1) GCGTGTGTGTGTGTGT 1 chr19:33506188-33506688 ( 40) GTGTGTGGGTGTGTGT 1 chr12:132951527-13295202 ( 81) GTATGTGTATGTGTGT 1 chr19:41230377-41230877 ( 51) GTGTGTGTATGAGTGT 1 chr19:33249720-33250220 ( 40) GTATCTGTGTGTGTGT 1 chr1:240562781-240563281 ( 51) GAGTGTGTATGTGTGT 1 chr22:24244142-24244642 ( 7) GTGTGTGAATGTGTGT 1 chr12:122094905-12209540 ( 16) GTGTGGGTATGTGTGT 1 chr12:84912607-84913107 ( 11) GTGTGTGTATGTGTGA 1 chr19:33274033-33274533 ( 82) GTGTCTGTCTGTGTGT 1 chr19:31464721-31465221 ( 5) TTGTGTGTATGTGTGT 1 chr3:194352620-194353120 ( 40) GTATGTGTGTGTGTGG 1 chr1:44404966-44405466 ( 1) GTATGTGTGTGAGTGT 1 chr10:46525839-46526339 ( 61) GTGTGTGTGGTTGTGT 1 chr19:6532183-6532683 ( 18) GTGTGGGTGTTTGTGT 1 chr19:35392891-35393391 ( 19) GTGTGTGTCTGTATGT 1 chr15:30173017-30173517 ( 6) GTGTGTGTCTGTGTGG 1 chr12:1605005-1605505 ( 28) GTGTGTGTGTGAGAGT 1 chr16:57628751-57629251 ( 5) GTGTGTGAGTGTGAGT 1 chr10:101830512-10183101 ( 54) GTGTGTGTGTGTATGG 1 chr19:36572857-36573357 ( 37) GTGTGTGTGTGTGAGA 1 chr12:70242784-70243284 ( 8) GTGTTTGTGTTTGTGT 1 chr12:124567588-12456808 ( 30) GTGTGTGCGTGCGTGT 1 chr3:194134801-194135301 ( 54) GTGTGTGCGTGCGTGT 1 chr18:63091716-63092216 ( 67) GTGTGTGTGAGTGTGG 1 chr19:36916362-36916862 ( 83) GTGTGGTTGTGTGTGT 1 chr19:36528711-36529211 ( 39) GTGTGTGTGTGATTGT 1 chr19:36772274-36772774 ( 75) GAGTGGGTGTGTGTGT 1 chr5:6447839-6448339 ( 33) GTGTGTGTAATTGTGT 1 chr1:235078129-235078629 ( 68) GTATGAGTATGTGTGT 1 chr7:66920782-66921282 ( 31) GTGCGTGTGCGTGTGT 1 chr22:39563942-39564442 ( 81) GTGTGTCTGTGTATGT 1 chr19:33250574-33251074 ( 84) GTATCTGTGTGTGTGG 1 chr22:45979940-45980440 ( 80) GTGTGTTCATGTGTGT 1 chr7:157432922-157433422 ( 66) GTGTGTGCATGCGTGT 1 chr8:28401274-28401774 ( 15) GCGTGTGTACGTGTGT 1 chr12:6689011-6689511 ( 58) GTGCGTGTGAGTGTGT 1 chr18:49019490-49019990 ( 83) GTATGTGAGTGTGAGT 1 chr19:30170757-30171257 ( 29) GTGTGTGTAGGTGTGA 1 chr19:33458234-33458734 ( 49) GTGTGTGGAGGTGTGT 1 chr19:47229140-47229640 ( 38) GCATGTGTCTGTGTGT 1 chr19:36488978-36489478 ( 79) GTGTGTGTGTGAGAGG 1 chr1:236085585-236086085 ( 14) GTGTGTGCATATGTGT 1 chr9:129340475-129340975 ( 73) GTGTGAGTCCGTGTGT 1 chr19:42283336-42283836 ( 6) GTGTCTGTATGTCTGT 1 chr10:133010670-13301117 ( 13) GTGTGTTAGCGTGTGT 1 chr19:461959-462459 ( 85) GTGTCTGGGTGCGTGT 1 chr21:45590977-45591477 ( 78) GTATCTCTGTGTGTGT 1 chr9:136307196-136307696 ( 84) GTGTTTGTGTGTGTTG 1 chr16:85522953-85523453 ( 39) GTGTGTGTGCACGTGT 1 chr12:8697809-8698309 ( 14) GGGTGTGAGTGTGTGG 1 chr3:52239123-52239623 ( 29) GTGTGTGTCTGTGCGC 1 chr16:30894179-30894679 ( 59) GAGTGCGTGCGTGTGT 1 chr1:228782509-228783009 ( 10) GTGTAGGTGTGTGTGA 1 chr19:37293505-37294005 ( 77) GTGCGTGTCTGTGTGC 1 chr19:6717434-6717934 ( 19) GTGTGGTTATGTATGT 1 chr22:50628636-50629136 ( 18) GTGTGTGTGGTTGAGG 1 chr12:132156858-13215735 ( 30) GTGTGTGTAGTGGTGT 1 chr19:38224224-38224724 ( 55) GCGTGAATGTGTGTGT 1 chr1:31387481-31387981 ( 48) GTGTCTGGGGGTGTGG 1 chr1:28648581-28649081 ( 29) GTGTGTGTTTTTTTTT 1 chr21:38660624-38661124 ( 39) GTGTGCGCGTGGGTGT 1 chr19:56393604-56394104 ( 39) GTGTGTGCGTGATTTT 1 chr15:72320165-72320665 ( 3) GTGTGTGCGGGCGTGG 1 chr19:36604656-36605156 ( 78) GTGTGGTGGTGTGAGT 1 chr2:230864456-230864956 ( 50) GAGTGAGTGAGTGAGT 1 chr15:74546117-74546617 ( 68) GCGTCTGCGTGTGTGC 1 chr5:43192531-43193031 ( 42) GTGTCTGCGTGCGCGT 1 chr22:49975425-49975925 ( 85) GTGTGTGGTGTTGTGT 1 chr1:29237080-29237580 ( 9) GTGTGTGTCCGTGCGC 1 chr1:111990062-111990562 ( 85) GGGTGTGAGCGCGTGT 1 chr15:84570943-84571443 ( 84) TGGTGTGTGTGTATTT 1 chr19:53554104-53554604 ( 46) GGGTCTGTGTGCGCGT 1 chr1:52553220-52553720 ( 5) GCGTGGGTGTGAGTGC 1 chr12:49967394-49967894 ( 85) GTGTGCGCGCGTGTGC 1 chr1:244918691-244919191 ( 15) GTGTGGGTGTGCGCGC 1 chr1:31937361-31937861 ( 74) GGGTATGGGTGTGTGG 1 chr7:2314610-2315110 ( 24) GAATGAGTGGGTGAGT 1 chr5:1950751-1951251 ( 32) TCATCTGTGCGTGTGT 1 chr19:434104-434604 ( 22) GAGTCTGTGAGTGAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 9.85005 E= 1.5e-496 -1385 -1385 170 -329 -229 -267 -316 214 -142 -1385 162 -1385 -1385 -389 -1385 230 -329 -178 154 -388 -256 -389 -231 216 -488 -448 165 -256 -229 -202 -267 208 -63 -216 139 -388 -256 -167 -231 203 -388 -1385 158 -118 -207 -216 -448 213 -229 -547 162 -288 -129 -316 -1385 216 -1385 -1385 167 -229 -256 -267 -189 208 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 148 E= 1.5e-496 0.000000 0.000000 0.979730 0.020270 0.040541 0.047297 0.033784 0.878378 0.074324 0.000000 0.925676 0.000000 0.000000 0.020270 0.000000 0.979730 0.020270 0.087838 0.878378 0.013514 0.033784 0.020270 0.060811 0.885135 0.006757 0.013514 0.945946 0.033784 0.040541 0.074324 0.047297 0.837838 0.128378 0.067568 0.790541 0.013514 0.033784 0.094595 0.060811 0.810811 0.013514 0.000000 0.898649 0.087838 0.047297 0.067568 0.013514 0.871622 0.040541 0.006757 0.925676 0.027027 0.081081 0.033784 0.000000 0.885135 0.000000 0.000000 0.959459 0.040541 0.033784 0.047297 0.081081 0.837838 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGT MEME-1 regular expression -------------------------------------------------------------------------------- GTGTGTGTGTGTGTGT -------------------------------------------------------------------------------- Time 789.02 secs. ******************************************************************************** ******************************************************************************** MOTIF ACACACACACACACACACAC MEME-2 width = 20 sites = 110 llr = 1558 E-value = 8.9e-248 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 8:71726262718:8:8:9: pos.-specific C 191717262719:919:a:8 probability G 1:11:1211:::::1:::1: matrix T 1:1:21:1111:11:11::1 bits 2.3 2.1 1.9 * 1.6 *** Relative 1.4 * **** Entropy 1.2 ** ******** (20.4 bits) 0.9 ** * ********* 0.7 ***** * * ********** 0.5 ******************** 0.2 ******************** 0.0 -------------------- Multilevel ACACACACACACACACACAC consensus CACA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chr17:40140151-40140651 + 25 5.95e-13 acaccccaac acacacacacacacacacac acacacacac chr12:57111963-57112463 + 78 5.95e-13 acacacacac acacacacacacacacacac aca chr19:35947339-35947839 - 75 5.95e-13 ACACAC ACACACACACACACACACAC ACACACACAC chr22:24010862-24011362 + 33 5.95e-13 acacacacac acacacacacacacacacac acacacacgc chr1:161097502-161098002 - 52 5.95e-13 CAGGTGACAC ACACACACACACACACACAC ACACACACAC chr19:47743202-47743702 - 32 5.95e-13 CCGAATACAC ACACACACACACACACACAC ACACACACAC chr2:241881395-241881895 - 18 5.95e-13 CCACACACAC ACACACACACACACACACAC ACACACACAC chr3:58334727-58335227 - 34 5.95e-13 CTCTACACAC ACACACACACACACACACAC AGACACACAC chr1:184386550-184387050 + 43 5.95e-13 acctgcccac acacacacacacacacacac acacacacTG chr15:65422263-65422763 + 75 5.95e-13 acacacacac acacacacacacacacacac GACTCC chr6:31652090-31652590 + 49 5.95e-13 acacacacac acacacacacacacacacac acCCACCACC chr7:25856742-25857242 + 75 5.95e-13 acacacacac acacacacacacacacacac acgcac chr2:85742459-85742959 - 79 5.95e-13 AC ACACACACACACACACACAC ACACACACAC chr6:139291842-139292342 + 8 4.97e-12 CCAATac acacacacacacatacacac gtgcacgcac chr19:36837854-36838354 + 56 6.91e-12 GTGCGCGcac acacacacacacacacacat acacacacac chr8:16825854-16826354 + 15 8.67e-12 GCAGATacac acacacgcacacacacacac acagacatac chr2:219571730-219572230 - 71 1.02e-11 ACACACTCAC ACACACACTCACACACACAC AAATTCTCAC chrX:156008781-156009281 - 12 1.64e-11 ACACAGAGAC ACACACACACAAACACACAC AGACTTAAAC chr1:201435693-201436193 - 40 2.19e-11 CTCTCTCTCT TCACACACACACACACACAC ACACACACAC chr16:30045348-30045848 - 65 2.49e-11 CACATACCAC ACACAAATACACACACACAC CACACAAACA chr19:39320102-39320602 + 22 3.20e-11 acacacacac acacacacacacacacacaA ATGGACACCC chr1:240562781-240563281 - 27 1.01e-10 ACACTCATAT ACACACATACACACATACAC TCACATATAC chr12:122021704-12202220 - 46 2.16e-10 GCACTCTCAC ACGCACACACTCACACACAC ACACACACAC chr19:30701035-30701535 + 58 2.94e-10 aaacacaaac acacatacacaaacacacac agacacacac chr1:10793916-10794416 - 19 7.04e-10 AAACACGCAC ACACACGCGCACACACACAC GTCGCCGTCC chr10:133010670-13301117 - 55 9.53e-10 CACATCACAC ACACTAACAATCACACACAC GAAAACACAT chr19:31464721-31465221 - 29 9.53e-10 ACACATACAC ACAAACCAATACACACACAC AAACCACTAC chr22:24244142-24244642 + 44 1.92e-09 ccacactcac actcacatacactcacacac acccacacat chr7:128360891-128361391 + 32 3.28e-09 acacacacac acacacacacacacacacGG CATGTACTGT chr12:1605005-1605505 - 69 3.73e-09 ACACACACTC ACACAGGCACAAACACACAC CACCCTCTGT chr19:41230377-41230877 - 7 5.56e-09 TCACACAGAA ACACACAAAGACACACACAG CCACAC chr4:3746647-3747147 - 43 1.04e-08 CAGGCACATC ACCCAGAGACACACACACAC ACACACACAC chr3:48087494-48087994 + 15 1.18e-08 GCGCGCGcac acacacatacacacgcacgc gcacacacac chr10:91608959-91609459 + 63 1.18e-08 acacacacac acacacacacacacacaggc atgcacagAA chr19:8240365-8240865 - 37 1.18e-08 CCTCCCAGAG ATGAAAACACACACACACAC ACACACACAC chr16:57628751-57629251 - 41 1.33e-08 GCTCAGTCAC ACTCTCACACTCACACTCAC ATTCTCACTC chr19:33249720-33250220 + 4 1.51e-08 cac acagacacacagatacacac ctcacacaca chr5:6447839-6448339 + 3 1.51e-08 ac acacaacacaccacacacac cacacactac chr22:39563942-39564442 - 38 1.51e-08 TACATAACAC ACAGAAACACAATCACACAC ATGCAGACAT chr1:202205454-202205954 + 11 2.15e-08 cgcacacctc cctcaaacatacacacacac ctccttcaaa chr22:45291306-45291806 - 4 2.72e-08 CACACAACAC ACATTCCAACTCACACACAC ACT chr9:133532941-133533441 - 40 3.06e-08 ACCTGTCACC CAGCACACACACACACACAC ACACACACAC chr1:44404966-44405466 - 35 3.84e-08 GGAGACACAC ACACGCGCGCACACACACAC GCACGCACAC chr19:33506188-33506688 + 5 4.83e-08 cacc actcacacacacaccctcat cacaccctac chr9:129340475-129340975 - 8 4.83e-08 CACAACTCAC ACACCAACTCACACATACAT AACTCAC chr20:52972201-52972701 - 4 5.41e-08 ACACACACAC ACCCTCGCACACACACACAA GAC chr22:50628636-50629136 - 73 5.41e-08 CACCACAC ACACCCAACACCACACACAT ACGTGCCTCA chr19:32745700-32746200 - 36 6.03e-08 AGTCTCTCTC TCTCTCACACACACACACAG AATAACCACA chr15:40092197-40092697 + 36 6.03e-08 CATCCAGTGC AAacacgcacacacacagac tcacacacac chr6:96924554-96925054 + 75 6.75e-08 acacacacac acacacacTTTCGCACACAC AAACAC chr19:47471971-47472471 + 42 7.51e-08 acacacacac gcacacacacacacGCACGC AGTCTCCCAG chr12:132951527-13295202 + 37 8.40e-08 cacacatcac acagacaagtacacacacat tgatacacat chr3:168096033-168096533 - 33 9.35e-08 GAACGAGAAC TGGAACACACACACACACAC ACACACACAC chr19:30170757-30171257 - 79 1.29e-07 AC ACACACATTCACTCATTCAC ACCTACACAT chr3:194134801-194135301 + 34 1.29e-07 cccggGGCGC GCGcacacacactcactcac acacgcacgc chr22:45979940-45980440 + 50 1.43e-07 cacacaacgc acataacacatcacacacac attagacata chr1:236101323-236101823 - 34 1.59e-07 CACATACAAC ACCCACAAACACACCTACAT AACACACAAA chr19:6532183-6532683 - 44 1.77e-07 ACACACCCAC ATGAACACAAACACCCACAC GAACGAACAA chr3:194352620-194353120 - 62 1.96e-07 CTCAGTGCAC ACTCACACATACCCACTCAC CACACACCAC chr16:85522953-85523453 - 10 2.17e-07 CAGGGCAGAC ACAACCACAGCCACATACAC ACAACACAC chr2:241620253-241620753 - 14 2.40e-07 CACTCACTCC TCACTCACCAACTCACTCAC CCCTCACTCA chr9:135967568-135968068 - 73 3.25e-07 CAGTGCAC ACATATGCACACATGCACAC AACACGCCCA chr16:66603874-66604374 - 31 3.25e-07 GCGCGCGCAA ACACACACAGGCACGCACAT CTGCAGGACT chr5:5340242-5340742 - 58 3.59e-07 AAACAAATGC ACAGAGAATTCCACACACAC GAGGGAGCCA chr1:228782509-228783009 - 67 3.96e-07 CACACAGCAT ACTCTACACACCACACACAC ATGCCGCACA chr22:49975425-49975925 - 53 5.31e-07 CACACACCAC ACAACACATGACACACACAC CACACACACA chr19:33250574-33251074 + 26 5.84e-07 cacaggccac acacagagactgatacacac cacacaccca chr10:46525839-46526339 + 11 6.44e-07 accacacaaa ccacacagaaccatacacat cttattcatc chr19:38224224-38224724 + 75 8.54e-07 tcacgcggat actcacagcctcccacacac tcctac chr19:42283336-42283836 - 27 9.37e-07 TCCTGAGCCC TCACCTACTCACACTCACAC TCCTCACAGA chr19:35392891-35393391 - 55 9.37e-07 ACATTAACAC ACAGAGCCACAAACATACAT GCACACAGAC chr7:2314610-2315110 + 70 1.03e-06 ctgcattcat tcattcacccactcactcac tgcatcctac chr12:8697809-8698309 - 32 1.03e-06 CTCCCTCACC CCACTCCCACACACTCTCAC TCCCACACAC chr14:103105049-10310554 - 35 1.13e-06 ACGCATGCAC ACACAGGCACACACCCTCAG CTCCATCACA chr15:30173017-30173517 - 42 1.24e-06 CACATACCAC ACACCACAAACATCACACAC CCTACTACAT chr19:6717434-6717934 - 72 1.24e-06 ACACACAAC ACAATACACAACATACACAA CCACGCAATA chr9:136307196-136307696 + 24 1.24e-06 tgcaccacac acaacacacaccatacacac agcacacaca chr8:28401274-28401774 - 77 1.24e-06 GCAC ACACACGGATACACACGCGC GCGTGCACAC chr16:89489012-89489512 + 27 1.77e-06 gcgcgcgcgc gcgcgcgcacacacatacac cacacacaca chr22:45290267-45290767 - 65 1.77e-06 CACTCACACA CCACTCACACACATACGCAA CACCGTAAAC chr18:63091716-63092216 - 30 1.77e-06 ATTCACACAC ACTACACACACCACACACAC TACACCCACT chr1:31387481-31387981 + 70 2.12e-06 ACACATCCAC ACAGATGACCTCACCCACAC CCCGAGACAC chr1:28884742-28885242 + 81 2.12e-06 CGCAGAGCCC TCCCTGGCCAacacacacac chr1:31386566-31387066 + 53 2.12e-06 ACATATCCAC ACAGATGACCTCACCCACAC CCCTAGGCAC chr1:235078129-235078629 - 43 2.52e-06 CATACACACA TAACACATATGCACACACAT AACATATAAC chr3:134795191-134795691 + 34 3.55e-06 acacacatgc acacccacacccacgcgcgc ccgcaccgcc chr1:226711204-226711704 - 55 3.55e-06 GCCATTGTGC AACATACACAACACACACAC ACACACACAC chr12:124567588-12456808 + 8 3.55e-06 ctcgcgc gcgcacgccgccacacacac agacacgcac chr19:40715622-40716122 - 41 3.87e-06 AGGCTTTCCA ACGCGCGCGCGCACACACAC ACACACACAC chr7:66920782-66921282 + 4 5.39e-06 cac actacaagccacatacacgc actacgcaca chr18:49019490-49019990 - 24 5.39e-06 GTTCACTCAC ACTCACCACATATCACACAT GCTAATTCAG chr21:6565347-6565847 + 30 5.85e-06 ctccacacac accacacactccacacacac cacacactcc chr19:33458234-33458734 - 20 6.35e-06 CAACCCCCAC ATACCACATACCATACACAC ACCACACATA chr16:1308129-1308629 - 24 7.46e-06 CCTCCCTCAC TCACTCATTCTCACTCTCAC TCATTCCCGC chr5:3323703-3324203 - 51 8.08e-06 CACACACCAC AGATACCACACAACACACAC ATCACACACC chr4:24472673-24473173 - 27 8.08e-06 ACACACACGC ACGCACCCCCGCGCGCACAC GCCCGCCCGC chr12:132156858-13215735 + 69 8.08e-06 cacacactac acactccactatgcacacac tacacataca chr19:39411878-39412378 - 27 9.47e-06 CATCTAATAA ACCAACCAAAACATCTACAT CACTTAGATG chr22:45979332-45979832 + 77 9.47e-06 acacacaaac acaacacagaccacgcacac caca chr19:434104-434604 - 64 9.47e-06 GATCTCACTC AGACTCATCATCTCACTCAC GATCTCATGA chr19:47241401-47241901 - 71 9.47e-06 AGAACATCAC ACAATTGTACACTGACACAC AATCACATTG chr12:70242784-70243284 + 28 9.47e-06 aaacacaaac acgaacacgaacacGCTCAG CGTCCCCGGG chr12:122094905-12209540 - 54 1.29e-05 ACACCACCAC ACCGCACTCACCACACACAC CACCACACCG chr2:230864456-230864956 - 76 1.40e-05 CTCGC TCGCACAGTCACTCACTCGC TCGCTCACTC chr19:461959-462459 - 56 2.36e-05 CAGCGTACAC CCTGCGCACAACACACACAC CGCGCGCAGG chr4:182143958-182144458 + 64 2.73e-05 acacacacac acacacGGACACGTGTACGC GCCCGGGCTC chr22:35840363-35840863 - 43 3.38e-05 ACACGCACAC ACGCACACACGCGTGCGCAC AGCGTACACC chr19:37594975-37595475 - 47 4.17e-05 ACTCGGACAC GCGCGCGCACAGACCCACAC ACACACGCAC chr19:36528711-36529211 - 8 8.77e-05 GTGCTAGGAC ATACATTCACAAAAACACAA TTTCACA chr8:38528059-38528559 - 70 2.10e-04 CTGATGCCAC GAGCACAGCCACTTCTACAC GTCACGGTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:40140151-40140651 5.9e-13 24_[+2]_56 chr12:57111963-57112463 5.9e-13 77_[+2]_3 chr19:35947339-35947839 5.9e-13 74_[-2]_6 chr22:24010862-24011362 5.9e-13 32_[+2]_48 chr1:161097502-161098002 5.9e-13 51_[-2]_29 chr19:47743202-47743702 5.9e-13 31_[-2]_49 chr2:241881395-241881895 5.9e-13 17_[-2]_63 chr3:58334727-58335227 5.9e-13 33_[-2]_47 chr1:184386550-184387050 5.9e-13 42_[+2]_38 chr15:65422263-65422763 5.9e-13 74_[+2]_6 chr6:31652090-31652590 5.9e-13 48_[+2]_32 chr7:25856742-25857242 5.9e-13 74_[+2]_6 chr2:85742459-85742959 5.9e-13 78_[-2]_2 chr6:139291842-139292342 5e-12 7_[+2]_73 chr19:36837854-36838354 6.9e-12 55_[+2]_25 chr8:16825854-16826354 8.7e-12 14_[+2]_66 chr2:219571730-219572230 1e-11 70_[-2]_10 chrX:156008781-156009281 1.6e-11 11_[-2]_69 chr1:201435693-201436193 2.2e-11 39_[-2]_41 chr16:30045348-30045848 2.5e-11 64_[-2]_16 chr19:39320102-39320602 3.2e-11 21_[+2]_59 chr1:240562781-240563281 1e-10 26_[-2]_54 chr12:122021704-12202220 2.2e-10 45_[-2]_35 chr19:30701035-30701535 2.9e-10 57_[+2]_23 chr1:10793916-10794416 7e-10 18_[-2]_62 chr10:133010670-13301117 9.5e-10 54_[-2]_26 chr19:31464721-31465221 9.5e-10 28_[-2]_52 chr22:24244142-24244642 1.9e-09 43_[+2]_37 chr7:128360891-128361391 3.3e-09 31_[+2]_49 chr12:1605005-1605505 3.7e-09 68_[-2]_12 chr19:41230377-41230877 5.6e-09 6_[-2]_74 chr4:3746647-3747147 1e-08 42_[-2]_38 chr3:48087494-48087994 1.2e-08 14_[+2]_66 chr10:91608959-91609459 1.2e-08 62_[+2]_18 chr19:8240365-8240865 1.2e-08 36_[-2]_44 chr16:57628751-57629251 1.3e-08 40_[-2]_40 chr19:33249720-33250220 1.5e-08 3_[+2]_77 chr5:6447839-6448339 1.5e-08 2_[+2]_78 chr22:39563942-39564442 1.5e-08 37_[-2]_43 chr1:202205454-202205954 2.1e-08 10_[+2]_70 chr22:45291306-45291806 2.7e-08 3_[-2]_77 chr9:133532941-133533441 3.1e-08 39_[-2]_41 chr1:44404966-44405466 3.8e-08 34_[-2]_46 chr19:33506188-33506688 4.8e-08 4_[+2]_76 chr9:129340475-129340975 4.8e-08 7_[-2]_73 chr20:52972201-52972701 5.4e-08 3_[-2]_77 chr22:50628636-50629136 5.4e-08 72_[-2]_8 chr19:32745700-32746200 6e-08 35_[-2]_45 chr15:40092197-40092697 6e-08 35_[+2]_45 chr6:96924554-96925054 6.8e-08 74_[+2]_6 chr19:47471971-47472471 7.5e-08 41_[+2]_39 chr12:132951527-13295202 8.4e-08 36_[+2]_44 chr3:168096033-168096533 9.3e-08 32_[-2]_48 chr19:30170757-30171257 1.3e-07 78_[-2]_2 chr3:194134801-194135301 1.3e-07 33_[+2]_47 chr22:45979940-45980440 1.4e-07 49_[+2]_31 chr1:236101323-236101823 1.6e-07 33_[-2]_47 chr19:6532183-6532683 1.8e-07 43_[-2]_37 chr3:194352620-194353120 2e-07 61_[-2]_19 chr16:85522953-85523453 2.2e-07 9_[-2]_71 chr2:241620253-241620753 2.4e-07 13_[-2]_67 chr9:135967568-135968068 3.3e-07 72_[-2]_8 chr16:66603874-66604374 3.3e-07 30_[-2]_50 chr5:5340242-5340742 3.6e-07 57_[-2]_23 chr1:228782509-228783009 4e-07 66_[-2]_14 chr22:49975425-49975925 5.3e-07 52_[-2]_28 chr19:33250574-33251074 5.8e-07 25_[+2]_55 chr10:46525839-46526339 6.4e-07 10_[+2]_70 chr19:38224224-38224724 8.5e-07 74_[+2]_6 chr19:42283336-42283836 9.4e-07 26_[-2]_54 chr19:35392891-35393391 9.4e-07 54_[-2]_26 chr7:2314610-2315110 1e-06 69_[+2]_11 chr12:8697809-8698309 1e-06 31_[-2]_49 chr14:103105049-10310554 1.1e-06 34_[-2]_46 chr15:30173017-30173517 1.2e-06 41_[-2]_39 chr19:6717434-6717934 1.2e-06 71_[-2]_9 chr9:136307196-136307696 1.2e-06 23_[+2]_57 chr8:28401274-28401774 1.2e-06 76_[-2]_4 chr16:89489012-89489512 1.8e-06 26_[+2]_54 chr22:45290267-45290767 1.8e-06 64_[-2]_16 chr18:63091716-63092216 1.8e-06 29_[-2]_51 chr1:31387481-31387981 2.1e-06 69_[+2]_11 chr1:28884742-28885242 2.1e-06 80_[+2] chr1:31386566-31387066 2.1e-06 52_[+2]_28 chr1:235078129-235078629 2.5e-06 42_[-2]_38 chr3:134795191-134795691 3.6e-06 33_[+2]_47 chr1:226711204-226711704 3.6e-06 54_[-2]_26 chr12:124567588-12456808 3.6e-06 7_[+2]_73 chr19:40715622-40716122 3.9e-06 40_[-2]_40 chr7:66920782-66921282 5.4e-06 3_[+2]_77 chr18:49019490-49019990 5.4e-06 23_[-2]_57 chr21:6565347-6565847 5.9e-06 29_[+2]_51 chr19:33458234-33458734 6.3e-06 19_[-2]_61 chr16:1308129-1308629 7.5e-06 23_[-2]_57 chr5:3323703-3324203 8.1e-06 50_[-2]_30 chr4:24472673-24473173 8.1e-06 26_[-2]_54 chr12:132156858-13215735 8.1e-06 68_[+2]_12 chr19:39411878-39412378 9.5e-06 26_[-2]_54 chr22:45979332-45979832 9.5e-06 76_[+2]_4 chr19:434104-434604 9.5e-06 63_[-2]_17 chr19:47241401-47241901 9.5e-06 70_[-2]_10 chr12:70242784-70243284 9.5e-06 27_[+2]_53 chr12:122094905-12209540 1.3e-05 53_[-2]_27 chr2:230864456-230864956 1.4e-05 75_[-2]_5 chr19:461959-462459 2.4e-05 55_[-2]_25 chr4:182143958-182144458 2.7e-05 63_[+2]_17 chr22:35840363-35840863 3.4e-05 42_[-2]_38 chr19:37594975-37595475 4.2e-05 46_[-2]_34 chr19:36528711-36529211 8.8e-05 7_[-2]_73 chr8:38528059-38528559 0.00021 69_[-2]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACACACACACACACACACAC width=20 seqs=110 chr17:40140151-40140651 ( 25) ACACACACACACACACACAC 1 chr12:57111963-57112463 ( 78) ACACACACACACACACACAC 1 chr19:35947339-35947839 ( 75) ACACACACACACACACACAC 1 chr22:24010862-24011362 ( 33) ACACACACACACACACACAC 1 chr1:161097502-161098002 ( 52) ACACACACACACACACACAC 1 chr19:47743202-47743702 ( 32) ACACACACACACACACACAC 1 chr2:241881395-241881895 ( 18) ACACACACACACACACACAC 1 chr3:58334727-58335227 ( 34) ACACACACACACACACACAC 1 chr1:184386550-184387050 ( 43) ACACACACACACACACACAC 1 chr15:65422263-65422763 ( 75) ACACACACACACACACACAC 1 chr6:31652090-31652590 ( 49) ACACACACACACACACACAC 1 chr7:25856742-25857242 ( 75) ACACACACACACACACACAC 1 chr2:85742459-85742959 ( 79) ACACACACACACACACACAC 1 chr6:139291842-139292342 ( 8) ACACACACACACATACACAC 1 chr19:36837854-36838354 ( 56) ACACACACACACACACACAT 1 chr8:16825854-16826354 ( 15) ACACACGCACACACACACAC 1 chr2:219571730-219572230 ( 71) ACACACACTCACACACACAC 1 chrX:156008781-156009281 ( 12) ACACACACACAAACACACAC 1 chr1:201435693-201436193 ( 40) TCACACACACACACACACAC 1 chr16:30045348-30045848 ( 65) ACACAAATACACACACACAC 1 chr19:39320102-39320602 ( 22) ACACACACACACACACACAA 1 chr1:240562781-240563281 ( 27) ACACACATACACACATACAC 1 chr12:122021704-12202220 ( 46) ACGCACACACTCACACACAC 1 chr19:30701035-30701535 ( 58) ACACATACACAAACACACAC 1 chr1:10793916-10794416 ( 19) ACACACGCGCACACACACAC 1 chr10:133010670-13301117 ( 55) ACACTAACAATCACACACAC 1 chr19:31464721-31465221 ( 29) ACAAACCAATACACACACAC 1 chr22:24244142-24244642 ( 44) ACTCACATACACTCACACAC 1 chr7:128360891-128361391 ( 32) ACACACACACACACACACGG 1 chr12:1605005-1605505 ( 69) ACACAGGCACAAACACACAC 1 chr19:41230377-41230877 ( 7) ACACACAAAGACACACACAG 1 chr4:3746647-3747147 ( 43) ACCCAGAGACACACACACAC 1 chr3:48087494-48087994 ( 15) ACACACATACACACGCACGC 1 chr10:91608959-91609459 ( 63) ACACACACACACACACAGGC 1 chr19:8240365-8240865 ( 37) ATGAAAACACACACACACAC 1 chr16:57628751-57629251 ( 41) ACTCTCACACTCACACTCAC 1 chr19:33249720-33250220 ( 4) ACAGACACACAGATACACAC 1 chr5:6447839-6448339 ( 3) ACACAACACACCACACACAC 1 chr22:39563942-39564442 ( 38) ACAGAAACACAATCACACAC 1 chr1:202205454-202205954 ( 11) CCTCAAACATACACACACAC 1 chr22:45291306-45291806 ( 4) ACATTCCAACTCACACACAC 1 chr9:133532941-133533441 ( 40) CAGCACACACACACACACAC 1 chr1:44404966-44405466 ( 35) ACACGCGCGCACACACACAC 1 chr19:33506188-33506688 ( 5) ACTCACACACACACCCTCAT 1 chr9:129340475-129340975 ( 8) ACACCAACTCACACATACAT 1 chr20:52972201-52972701 ( 4) ACCCTCGCACACACACACAA 1 chr22:50628636-50629136 ( 73) ACACCCAACACCACACACAT 1 chr19:32745700-32746200 ( 36) TCTCTCACACACACACACAG 1 chr15:40092197-40092697 ( 36) AAACACGCACACACACAGAC 1 chr6:96924554-96925054 ( 75) ACACACACTTTCGCACACAC 1 chr19:47471971-47472471 ( 42) GCACACACACACACGCACGC 1 chr12:132951527-13295202 ( 37) ACAGACAAGTACACACACAT 1 chr3:168096033-168096533 ( 33) TGGAACACACACACACACAC 1 chr19:30170757-30171257 ( 79) ACACACATTCACTCATTCAC 1 chr3:194134801-194135301 ( 34) GCGCACACACACTCACTCAC 1 chr22:45979940-45980440 ( 50) ACATAACACATCACACACAC 1 chr1:236101323-236101823 ( 34) ACCCACAAACACACCTACAT 1 chr19:6532183-6532683 ( 44) ATGAACACAAACACCCACAC 1 chr3:194352620-194353120 ( 62) ACTCACACATACCCACTCAC 1 chr16:85522953-85523453 ( 10) ACAACCACAGCCACATACAC 1 chr2:241620253-241620753 ( 14) TCACTCACCAACTCACTCAC 1 chr9:135967568-135968068 ( 73) ACATATGCACACATGCACAC 1 chr16:66603874-66604374 ( 31) ACACACACAGGCACGCACAT 1 chr5:5340242-5340742 ( 58) ACAGAGAATTCCACACACAC 1 chr1:228782509-228783009 ( 67) ACTCTACACACCACACACAC 1 chr22:49975425-49975925 ( 53) ACAACACATGACACACACAC 1 chr19:33250574-33251074 ( 26) ACACAGAGACTGATACACAC 1 chr10:46525839-46526339 ( 11) CCACACAGAACCATACACAT 1 chr19:38224224-38224724 ( 75) ACTCACAGCCTCCCACACAC 1 chr19:42283336-42283836 ( 27) TCACCTACTCACACTCACAC 1 chr19:35392891-35393391 ( 55) ACAGAGCCACAAACATACAT 1 chr7:2314610-2315110 ( 70) TCATTCACCCACTCACTCAC 1 chr12:8697809-8698309 ( 32) CCACTCCCACACACTCTCAC 1 chr14:103105049-10310554 ( 35) ACACAGGCACACACCCTCAG 1 chr15:30173017-30173517 ( 42) ACACCACAAACATCACACAC 1 chr19:6717434-6717934 ( 72) ACAATACACAACATACACAA 1 chr9:136307196-136307696 ( 24) ACAACACACACCATACACAC 1 chr8:28401274-28401774 ( 77) ACACACGGATACACACGCGC 1 chr16:89489012-89489512 ( 27) GCGCGCGCACACACATACAC 1 chr22:45290267-45290767 ( 65) CCACTCACACACATACGCAA 1 chr18:63091716-63092216 ( 30) ACTACACACACCACACACAC 1 chr1:31387481-31387981 ( 70) ACAGATGACCTCACCCACAC 1 chr1:28884742-28885242 ( 81) TCCCTGGCCAACACACACAC 1 chr1:31386566-31387066 ( 53) ACAGATGACCTCACCCACAC 1 chr1:235078129-235078629 ( 43) TAACACATATGCACACACAT 1 chr3:134795191-134795691 ( 34) ACACCCACACCCACGCGCGC 1 chr1:226711204-226711704 ( 55) AACATACACAACACACACAC 1 chr12:124567588-12456808 ( 8) GCGCACGCCGCCACACACAC 1 chr19:40715622-40716122 ( 41) ACGCGCGCGCGCACACACAC 1 chr7:66920782-66921282 ( 4) ACTACAAGCCACATACACGC 1 chr18:49019490-49019990 ( 24) ACTCACCACATATCACACAT 1 chr21:6565347-6565847 ( 30) ACCACACACTCCACACACAC 1 chr19:33458234-33458734 ( 20) ATACCACATACCATACACAC 1 chr16:1308129-1308629 ( 24) TCACTCATTCTCACTCTCAC 1 chr5:3323703-3324203 ( 51) AGATACCACACAACACACAC 1 chr4:24472673-24473173 ( 27) ACGCACCCCCGCGCGCACAC 1 chr12:132156858-13215735 ( 69) ACACTCCACTATGCACACAC 1 chr19:39411878-39412378 ( 27) ACCAACCAAAACATCTACAT 1 chr22:45979332-45979832 ( 77) ACAACACAGACCACGCACAC 1 chr19:434104-434604 ( 64) AGACTCATCATCTCACTCAC 1 chr19:47241401-47241901 ( 71) ACAATTGTACACTGACACAC 1 chr12:70242784-70243284 ( 28) ACGAACACGAACACGCTCAG 1 chr12:122094905-12209540 ( 54) ACCGCACTCACCACACACAC 1 chr2:230864456-230864956 ( 76) TCGCACAGTCACTCACTCGC 1 chr19:461959-462459 ( 56) CCTGCGCACAACACACACAC 1 chr4:182143958-182144458 ( 64) ACACACGGACACGTGTACGC 1 chr22:35840363-35840863 ( 43) ACGCACACACGCGTGCGCAC 1 chr19:37594975-37595475 ( 47) GCGCGCGCACAGACCCACAC 1 chr19:36528711-36529211 ( 8) ATACATTCACAAAAACACAA 1 chr8:38528059-38528559 ( 70) GAGCACAGCCACTTCTACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48600 bayes= 10.4466 E= 8.9e-248 201 -247 -247 -113 -213 156 -346 -245 178 -205 -114 -86 -45 127 -188 -213 176 -114 -305 -36 -13 118 -205 -164 164 -53 -88 -445 25 97 -188 -113 166 -41 -247 -113 7 112 -273 -113 180 -105 -273 -75 -128 155 -346 -445 206 -405 -273 -86 -445 150 -505 -64 201 -188 -173 -286 -1343 159 -1343 -113 209 -1343 -305 -75 -1343 170 -405 -1343 221 -1343 -188 -1343 -213 141 -273 -86 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 110 E= 8.9e-248 0.800000 0.054545 0.054545 0.090909 0.045455 0.890909 0.027273 0.036364 0.681818 0.072727 0.136364 0.109091 0.145455 0.727273 0.081818 0.045455 0.672727 0.136364 0.036364 0.154545 0.181818 0.681818 0.072727 0.063636 0.618182 0.209091 0.163636 0.009091 0.236364 0.590909 0.081818 0.090909 0.627273 0.227273 0.054545 0.090909 0.209091 0.654545 0.045455 0.090909 0.690909 0.145455 0.045455 0.118182 0.081818 0.881818 0.027273 0.009091 0.827273 0.018182 0.045455 0.109091 0.009091 0.854545 0.009091 0.127273 0.800000 0.081818 0.090909 0.027273 0.000000 0.909091 0.000000 0.090909 0.845455 0.000000 0.036364 0.118182 0.000000 0.981818 0.018182 0.000000 0.918182 0.000000 0.081818 0.000000 0.045455 0.800000 0.045455 0.109091 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACAC MEME-2 regular expression -------------------------------------------------------------------------------- ACACAC[AC][CA][AC][CA]ACACACACAC -------------------------------------------------------------------------------- Time 1471.31 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 width = 30 sites = 23 llr = 761 E-value = 4.5e-174 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::a7::::a::46:::2:1a::::3a: pos.-specific C aa::::::aaa::9:46:5:::::193::: probability G :::a::3:::::a::::::8a9:a9::7:a matrix T ::a:a::a:::::16:4a5::::::17::: bits 2.3 * * 2.1 * ** * * * * * 1.9 * ** * * * * * 1.6 *** ** *** ** * * * * Relative 1.4 *************** * ****** ** Entropy 1.2 **************** * ******* *** (47.8 bits) 0.9 ****************************** 0.7 ****************************** 0.5 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel CCTGTAATCCCAGCTACTTGGGAGGCTGAG consensus G ACT C CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr17:4143132-4143632 + 68 1.74e-18 ggggcgcgtg cctgtaatcccagctacttgggaggctgag gca chr7:74079479-74079979 + 40 7.63e-18 gtggcaggca cctgtaatcccagctactcgggaggctgag gcaggagaat chr6:28790253-28790753 + 71 7.63e-18 gtggcgcatg cctgtaatcccagctactcgggaggctgag chr19:49817586-49818086 + 12 7.63e-18 gttgcgggca cctgtaatcccagctactcgggaggctgag gcaggagaat chr19:35701842-35702342 - 70 3.42e-17 G CCTGTAATCCCAGCACTTTGGGAGGCTAAG GCGGGCAGAT chr1:146038240-146038740 - 62 5.26e-17 TGGCGGGCG CCTGTAATCCCAGCTACTCAGGAGGCTGAG GCAGGAGAAT chr14:103075879-10307637 + 30 5.26e-17 gtggtgggtg cctgtaatcccagctactcaggaggctgag gcaggagaat chr19:40403803-40404303 - 50 7.44e-17 GTGGCTCACG CCTGTAATCCCAGCACTTTGGGAGGCCGAG GCGGGAGGAT chr22:37844448-37844948 - 36 8.51e-17 GTGGCGCGCG CCTGTAGTCCCAGCTACTCGGGAGGCTGAG GCAGGAGAAT chr12:55829108-55829608 + 11 8.51e-17 gtggcgcgca cctgtagtcccagctactcgggaggctgag gcagaagaat chr19:49495487-49495987 - 61 8.51e-17 GTGGCGGGCC CCTGTAATCCCAGCTACTTGGAAGGCTGAG GCAGGAGAAT chr16:30598236-30598736 + 37 1.49e-16 gtggctcacg cctgtaatcccagcactttgggaggccaag gcaggcagat chr19:39073279-39073779 - 36 1.49e-16 GTGGCTCATG CCTGTAATCCCAGCACTTTGGGAGGCCAAG GCGGGTGGAT chr6:32130532-32131032 + 31 2.01e-16 gtggctcacg cctgtaatcccagcactttgggaggttgag gtcaggagtt chr6:107027794-107028294 + 11 2.94e-16 gtggtgggcg cctgtagtcccagctactcaggaggctgag gcaggagaat chr1:59814075-59814575 - 31 3.90e-16 GTGGCTCACG CCTGTAATCCTAGCACTTTGGGAGGCTGAG GCGGGTGGAT chr20:3159880-3160380 + 5 1.06e-15 cacg cctgtaatcccagtactttgggaggccaag gcgggcggat chr12:120292135-12029263 + 7 2.52e-15 ctcacg cctgtaatcccagcactctgggaggccgag gcgggtggat chr12:48716916-48717416 + 50 7.92e-15 gtggttcacg cctgtaatcccagcactttgggagcccgaa gcgggcggat chr19:36796913-36797413 - 28 9.58e-15 GTGGCGGGCG CCTATAGTCCCAGCTACTCGGGAAGCTGAG GCCGCAGAAT chr5:150449911-150450411 + 24 2.42e-14 gtggcgccgg cctgtggtcccagttactcaggaggctgag gatcgcttcg chr17:75905090-75905590 + 35 4.27e-14 gtggctcacg ccgggaatcccagcactttgggaggccaag gcgggtggat chr6:31197093-31197593 - 43 4.97e-12 GTCGTAGGCG CCTGTAGTCCCAGCTACTCGGAGGCTGAGG CAGAAAAATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:4143132-4143632 1.7e-18 67_[+3]_3 chr7:74079479-74079979 7.6e-18 39_[+3]_31 chr6:28790253-28790753 7.6e-18 70_[+3] chr19:49817586-49818086 7.6e-18 11_[+3]_59 chr19:35701842-35702342 3.4e-17 69_[-3]_1 chr1:146038240-146038740 5.3e-17 61_[-3]_9 chr14:103075879-10307637 5.3e-17 29_[+3]_41 chr19:40403803-40404303 7.4e-17 49_[-3]_21 chr22:37844448-37844948 8.5e-17 35_[-3]_35 chr12:55829108-55829608 8.5e-17 10_[+3]_60 chr19:49495487-49495987 8.5e-17 60_[-3]_10 chr16:30598236-30598736 1.5e-16 36_[+3]_34 chr19:39073279-39073779 1.5e-16 35_[-3]_35 chr6:32130532-32131032 2e-16 30_[+3]_40 chr6:107027794-107028294 2.9e-16 10_[+3]_60 chr1:59814075-59814575 3.9e-16 30_[-3]_40 chr20:3159880-3160380 1.1e-15 4_[+3]_66 chr12:120292135-12029263 2.5e-15 6_[+3]_64 chr12:48716916-48717416 7.9e-15 49_[+3]_21 chr19:36796913-36797413 9.6e-15 27_[-3]_43 chr5:150449911-150450411 2.4e-14 23_[+3]_47 chr17:75905090-75905590 4.3e-14 34_[+3]_36 chr6:31197093-31197593 5e-12 42_[-3]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTGTAATCCCAGCWMYTYGGGAGGCTGAG width=30 seqs=23 chr17:4143132-4143632 ( 68) CCTGTAATCCCAGCTACTTGGGAGGCTGAG 1 chr7:74079479-74079979 ( 40) CCTGTAATCCCAGCTACTCGGGAGGCTGAG 1 chr6:28790253-28790753 ( 71) CCTGTAATCCCAGCTACTCGGGAGGCTGAG 1 chr19:49817586-49818086 ( 12) CCTGTAATCCCAGCTACTCGGGAGGCTGAG 1 chr19:35701842-35702342 ( 70) CCTGTAATCCCAGCACTTTGGGAGGCTAAG 1 chr1:146038240-146038740 ( 62) CCTGTAATCCCAGCTACTCAGGAGGCTGAG 1 chr14:103075879-10307637 ( 30) CCTGTAATCCCAGCTACTCAGGAGGCTGAG 1 chr19:40403803-40404303 ( 50) CCTGTAATCCCAGCACTTTGGGAGGCCGAG 1 chr22:37844448-37844948 ( 36) CCTGTAGTCCCAGCTACTCGGGAGGCTGAG 1 chr12:55829108-55829608 ( 11) CCTGTAGTCCCAGCTACTCGGGAGGCTGAG 1 chr19:49495487-49495987 ( 61) CCTGTAATCCCAGCTACTTGGAAGGCTGAG 1 chr16:30598236-30598736 ( 37) CCTGTAATCCCAGCACTTTGGGAGGCCAAG 1 chr19:39073279-39073779 ( 36) CCTGTAATCCCAGCACTTTGGGAGGCCAAG 1 chr6:32130532-32131032 ( 31) CCTGTAATCCCAGCACTTTGGGAGGTTGAG 1 chr6:107027794-107028294 ( 11) CCTGTAGTCCCAGCTACTCAGGAGGCTGAG 1 chr1:59814075-59814575 ( 31) CCTGTAATCCTAGCACTTTGGGAGGCTGAG 1 chr20:3159880-3160380 ( 5) CCTGTAATCCCAGTACTTTGGGAGGCCAAG 1 chr12:120292135-12029263 ( 7) CCTGTAATCCCAGCACTCTGGGAGGCCGAG 1 chr12:48716916-48717416 ( 50) CCTGTAATCCCAGCACTTTGGGAGCCCGAA 1 chr19:36796913-36797413 ( 28) CCTATAGTCCCAGCTACTCGGGAAGCTGAG 1 chr5:150449911-150450411 ( 24) CCTGTGGTCCCAGTTACTCAGGAGGCTGAG 1 chr17:75905090-75905590 ( 35) CCGGGAATCCCAGCACTTTGGGAGGCCAAG 1 chr6:31197093-31197593 ( 43) CCTGTAGTCCCAGCTACTCGGAGGCTGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 10.4611 E= 4.5e-174 -1117 173 -1117 -1117 -1117 173 -1117 -1117 -1117 -1117 -279 227 -219 -1117 167 -1117 -1117 -1117 -279 227 227 -1117 -279 -1117 189 -1117 -21 -1117 -1117 -1117 -1117 233 -1117 173 -1117 -1117 -1117 173 -1117 -1117 -1117 167 -1117 -219 233 -1117 -1117 -1117 -1117 -1117 173 -1117 -1117 160 -1117 -119 113 -1117 -1117 151 151 53 -1117 -1117 -1117 91 -1117 113 -1117 -279 -1117 227 -1117 67 -1117 139 -19 -1117 145 -1117 -1117 -1117 173 -1117 -119 -1117 160 -1117 227 -1117 -279 -1117 -219 -1117 167 -1117 -1117 -179 160 -1117 -1117 160 -1117 -119 -1117 1 -279 171 39 -1117 129 -1117 227 -1117 -279 -1117 -219 -1117 167 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 23 E= 4.5e-174 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.043478 0.956522 0.043478 0.000000 0.956522 0.000000 0.000000 0.000000 0.043478 0.956522 0.956522 0.000000 0.043478 0.000000 0.739130 0.000000 0.260870 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.956522 0.000000 0.043478 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.913043 0.000000 0.086957 0.434783 0.000000 0.000000 0.565217 0.565217 0.434783 0.000000 0.000000 0.000000 0.565217 0.000000 0.434783 0.000000 0.043478 0.000000 0.956522 0.000000 0.478261 0.000000 0.521739 0.173913 0.000000 0.826087 0.000000 0.000000 0.000000 1.000000 0.000000 0.086957 0.000000 0.913043 0.000000 0.956522 0.000000 0.043478 0.000000 0.043478 0.000000 0.956522 0.000000 0.000000 0.086957 0.913043 0.000000 0.000000 0.913043 0.000000 0.086957 0.000000 0.304348 0.043478 0.652174 0.260870 0.000000 0.739130 0.000000 0.956522 0.000000 0.043478 0.000000 0.043478 0.000000 0.956522 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTAATCCCAGCWMYTYGGGAGGCTGAG MEME-3 regular expression -------------------------------------------------------------------------------- CCTGTA[AG]TCCCAGC[TA][AC][CT]T[TC]GGGAGGC[TC][GA]AG -------------------------------------------------------------------------------- Time 2132.28 secs. ******************************************************************************** ******************************************************************************** MOTIF SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 width = 31 sites = 27 llr = 731 E-value = 2.5e-144 ******************************************************************************** -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 Description -------------------------------------------------------------------------------- Simplified A :4::57:a::a::3::41:a6:9::411966 pos.-specific C 4:19:13:7a:1a7:4:8a:19::3:23:14 probability G 6:::5:6::::6:::65::::11:66:6::: matrix T :69::2::3::2::a:::::3::a::7::2: bits 2.3 * * * 2.1 * * * * * 1.9 * * * * * * * 1.6 * * ** * * ** ** * Relative 1.4 *** * ** * * ** ** * Entropy 1.2 *** * **** * * ****** * * (39.1 bits) 0.9 ***** **** * * ******* ** * * 0.7 *********** ************ ** *** 0.5 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel GTTCAAGACCAGCCTGGCCAACATGGTGAAA consensus CA G C T T A CA T CACC TC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr6:32130532-32131032 + 68 5.32e-19 gaggtcagga gttcaagaccagcctggccaacatggtgaaa cc chr16:31094886-31095386 + 40 2.70e-18 gaggtcagga gttcaagaccagcctcgccaacatggtgaaa ccccatctca chr19:50134098-50134598 + 22 2.70e-18 gaggtcagca gttcgagaccagcctggccaacatggtgaaa cactgtctct chr19:39033031-39033531 + 36 2.70e-18 gaggtcagaa gttcgagaccagcctggccaacatggtgaaa ccccgtctct chr7:6448141-6448641 - 60 2.70e-18 GAGGTCAGGG GTTCGAGACCAGCCTGGCCAACATGGTGAAA CTTCGTCTCT chr6:30907488-30907988 - 26 2.19e-17 GAGGTCAGGA GTTCGAGACCATCCTGGCCAACATGGTGAAA CCCCCGTCTT chr17:1258901-1259401 - 49 1.58e-16 GAGGTCAGGA GTTCGAGACCAGCCTGGCCAACATGGCGAAA TCCCGTCGCT chr1:161764849-161765349 - 27 7.36e-16 GAGGTCAGGA GTTCGAGACCAGCCTGGCCAACATAGTGAAA CCCTGTCTCC chr19:35701842-35702342 - 14 9.99e-16 GAGGTCAGGA GTTCGAGACCAGCCTGACCAATATGGTGAAA CCCCGTCTCT chr19:44259443-44259943 - 49 1.55e-15 TAGGTCAGCA GTTTGAGACCAGCCTGGCCAACATGGTGAAA CCCCGTCTCT chr12:120292135-12029263 + 60 4.63e-15 gaggtcagga gttcaagaccagcctggacaagatggtgaaa cggggtcgct chr1:150876809-150877309 + 48 7.70e-15 gtggccaggg gttcgaaaccagcctggccaacatggcgaaa ccccgtctct chr2:28894067-28894567 - 50 1.11e-14 TGAGGTCGGA GTTCGAGACCAGCCTGACCAACATGTAGAAA CCCCCGTCTC chr20:62301584-62302084 - 56 4.85e-14 GAGGCCAGGA GTTCAAGACCAGCCTGGGCAACATGGTGAAT GAAACCCCGA chr20:3159880-3160380 + 60 6.64e-14 gagttcagga gttcgagaccagcctggctaacgtggtgaaa cccccgtctc chr16:85823426-85823926 + 3 2.38e-13 ac catcaacatcatcatcaccatcatcatcatc accatcacca chr22:44479663-44480163 + 33 1.06e-12 tcaccatcac catcatcaccaccatcaccatcatcatcatc accatcatca chr12:124092474-12409297 - 20 3.20e-12 TCATCATCAC CATCATCATCACCATCACCATCATCATCACC ATCACCATCA chr12:119480555-11948105 + 10 4.99e-12 catcatcat catcaccatcatcatcaccatcatcatcacc accatcgtca chr16:86951388-86951888 + 7 1.24e-11 catcaa catcatcatcatcatcaccaccatcaccatc accaccatct chr12:108982745-10898324 + 1 1.61e-11 . catcatgatcaccatcatcatcatcataatc atcactatca chr4:1467850-1468350 - 70 2.09e-11 . CATCACCATCATCTTCACCATCATCATCACC ATCACCATCA chr5:176591620-176592120 - 1 2.37e-11 ATCACCTCAA CACCAACACCATCATCACCACCATCACCATC chr17:81253563-81254063 + 37 3.05e-11 ccaccatcac catcatcatcaccgtcaccatcatcaccatc accgctatca chr3:58334727-58335227 - 70 8.83e-11 . CACACACACCAGCCTGGACAACATGGTGAGA CGCTGTCTCT chr3:169762996-169763496 + 52 9.53e-10 gaggtcagga gttcgaggccagcctgcccaactttactgaa aatacaaaaa chr14:34539787-34540287 - 69 2.31e-09 A GTTCGAGACCAGCCTCAACATGGAGAAACCC CCGTCTCTAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:32130532-32131032 5.3e-19 67_[+4]_2 chr16:31094886-31095386 2.7e-18 39_[+4]_30 chr19:50134098-50134598 2.7e-18 21_[+4]_48 chr19:39033031-39033531 2.7e-18 35_[+4]_34 chr7:6448141-6448641 2.7e-18 59_[-4]_10 chr6:30907488-30907988 2.2e-17 25_[-4]_44 chr17:1258901-1259401 1.6e-16 48_[-4]_21 chr1:161764849-161765349 7.4e-16 26_[-4]_43 chr19:35701842-35702342 1e-15 13_[-4]_56 chr19:44259443-44259943 1.6e-15 48_[-4]_21 chr12:120292135-12029263 4.6e-15 59_[+4]_10 chr1:150876809-150877309 7.7e-15 47_[+4]_22 chr2:28894067-28894567 1.1e-14 49_[-4]_20 chr20:62301584-62302084 4.8e-14 55_[-4]_14 chr20:3159880-3160380 6.6e-14 59_[+4]_10 chr16:85823426-85823926 2.4e-13 2_[+4]_67 chr22:44479663-44480163 1.1e-12 32_[+4]_37 chr12:124092474-12409297 3.2e-12 19_[-4]_50 chr12:119480555-11948105 5e-12 9_[+4]_60 chr16:86951388-86951888 1.2e-11 6_[+4]_63 chr12:108982745-10898324 1.6e-11 [+4]_69 chr4:1467850-1468350 2.1e-11 69_[-4] chr5:176591620-176592120 2.4e-11 [-4]_69 chr17:81253563-81254063 3.1e-11 36_[+4]_33 chr3:58334727-58335227 8.8e-11 69_[-4] chr3:169762996-169763496 9.5e-10 51_[+4]_18 chr14:34539787-34540287 2.3e-09 68_[-4]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SWTCRASACCAGCCTSRCCAACATSRTSAAM width=31 seqs=27 chr6:32130532-32131032 ( 68) GTTCAAGACCAGCCTGGCCAACATGGTGAAA 1 chr16:31094886-31095386 ( 40) GTTCAAGACCAGCCTCGCCAACATGGTGAAA 1 chr19:50134098-50134598 ( 22) GTTCGAGACCAGCCTGGCCAACATGGTGAAA 1 chr19:39033031-39033531 ( 36) GTTCGAGACCAGCCTGGCCAACATGGTGAAA 1 chr7:6448141-6448641 ( 60) GTTCGAGACCAGCCTGGCCAACATGGTGAAA 1 chr6:30907488-30907988 ( 26) GTTCGAGACCATCCTGGCCAACATGGTGAAA 1 chr17:1258901-1259401 ( 49) GTTCGAGACCAGCCTGGCCAACATGGCGAAA 1 chr1:161764849-161765349 ( 27) GTTCGAGACCAGCCTGGCCAACATAGTGAAA 1 chr19:35701842-35702342 ( 14) GTTCGAGACCAGCCTGACCAATATGGTGAAA 1 chr19:44259443-44259943 ( 49) GTTTGAGACCAGCCTGGCCAACATGGTGAAA 1 chr12:120292135-12029263 ( 60) GTTCAAGACCAGCCTGGACAAGATGGTGAAA 1 chr1:150876809-150877309 ( 48) GTTCGAAACCAGCCTGGCCAACATGGCGAAA 1 chr2:28894067-28894567 ( 50) GTTCGAGACCAGCCTGACCAACATGTAGAAA 1 chr20:62301584-62302084 ( 56) GTTCAAGACCAGCCTGGGCAACATGGTGAAT 1 chr20:3159880-3160380 ( 60) GTTCGAGACCAGCCTGGCTAACGTGGTGAAA 1 chr16:85823426-85823926 ( 3) CATCAACATCATCATCACCATCATCATCATC 1 chr22:44479663-44480163 ( 33) CATCATCACCACCATCACCATCATCATCATC 1 chr12:124092474-12409297 ( 20) CATCATCATCACCATCACCATCATCATCACC 1 chr12:119480555-11948105 ( 10) CATCACCATCATCATCACCATCATCATCACC 1 chr16:86951388-86951888 ( 7) CATCATCATCATCATCACCACCATCACCATC 1 chr12:108982745-10898324 ( 1) CATCATGATCACCATCATCATCATCATAATC 1 chr4:1467850-1468350 ( 70) CATCACCATCATCTTCACCATCATCATCACC 1 chr5:176591620-176592120 ( 1) CACCAACACCATCATCACCACCATCACCATC 1 chr17:81253563-81254063 ( 37) CATCATCATCACCGTCACCATCATCACCATC 1 chr3:58334727-58335227 ( 70) CACACACACCAGCCTGGACAACATGGTGAGA 1 chr3:169762996-169763496 ( 52) GTTCGAGGCCAGCCTGCCCAACTTTACTGAA 1 chr14:34539787-34540287 ( 69) GTTCGAGACCAGCCTCAACATGGAGAAACCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.1716 E= 2.5e-144 -1140 30 106 -1140 90 -1140 -1140 166 -1140 -202 -1140 222 -242 162 -1140 -242 128 -302 68 -1140 190 -202 -1140 -10 -242 15 106 -1140 228 -1140 -302 -1140 -1140 130 -1140 38 -1140 173 -1140 -1140 233 -1140 -1140 -1140 -1140 -102 106 16 -1140 173 -1140 -1140 38 115 -302 -242 -1140 -1140 -1140 233 -1140 44 98 -1140 116 -302 78 -1140 -84 143 -302 -242 -1140 168 -1140 -242 233 -1140 -1140 -1140 166 -202 -1140 58 -1140 156 -202 -242 216 -1140 -202 -242 -242 -1140 -1140 228 -242 15 98 -242 104 -1140 88 -242 -142 -44 -1140 182 -142 -2 98 -242 222 -302 -302 -1140 158 -102 -302 16 158 30 -1140 -242 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 27 E= 2.5e-144 0.000000 0.370370 0.629630 0.000000 0.370370 0.000000 0.000000 0.629630 0.000000 0.074074 0.000000 0.925926 0.037037 0.925926 0.000000 0.037037 0.481481 0.037037 0.481481 0.000000 0.740741 0.074074 0.000000 0.185185 0.037037 0.333333 0.629630 0.000000 0.962963 0.000000 0.037037 0.000000 0.000000 0.740741 0.000000 0.259259 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.148148 0.629630 0.222222 0.000000 1.000000 0.000000 0.000000 0.259259 0.666667 0.037037 0.037037 0.000000 0.000000 0.000000 1.000000 0.000000 0.407407 0.592593 0.000000 0.444444 0.037037 0.518519 0.000000 0.111111 0.814815 0.037037 0.037037 0.000000 0.962963 0.000000 0.037037 1.000000 0.000000 0.000000 0.000000 0.629630 0.074074 0.000000 0.296296 0.000000 0.888889 0.074074 0.037037 0.888889 0.000000 0.074074 0.037037 0.037037 0.000000 0.000000 0.962963 0.037037 0.333333 0.592593 0.037037 0.407407 0.000000 0.555556 0.037037 0.074074 0.222222 0.000000 0.703704 0.074074 0.296296 0.592593 0.037037 0.925926 0.037037 0.037037 0.000000 0.592593 0.148148 0.037037 0.222222 0.592593 0.370370 0.000000 0.037037 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWTCRASACCAGCCTSRCCAACATSRTSAAM MEME-4 regular expression -------------------------------------------------------------------------------- [GC][TA]TC[AG]A[GC]A[CT]CA[GT]C[CA]T[GC][GA]CCA[AT]CAT[GC][GA][TC][GC]A[AT][AC] -------------------------------------------------------------------------------- Time 2777.41 secs. ******************************************************************************** ******************************************************************************** MOTIF CACACAYACACA MEME-5 width = 12 sites = 106 llr = 1115 E-value = 2.2e-090 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a2938:9:938 pos.-specific C 7:8:716:8172 probability G :::1:111::1: matrix T 2::::1411::: bits 2.3 * 2.1 * 1.9 * * 1.6 * * * * Relative 1.4 * * * * * Entropy 1.2 *** * * * * (15.2 bits) 0.9 ****** *** * 0.7 ************ 0.5 ************ 0.2 ************ 0.0 ------------ Multilevel CACACACACACA consensus T A A T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr17:40140151-40140651 + 46 7.67e-08 cacacacaca cacacacacaca cacacacaca chr12:57111963-57112463 + 3 7.67e-08 ca cacacacacaca cGTGCAGGCA chr1:156661285-156661785 - 88 7.67e-08 A CACACACACACA CACACACACA chr3:48087494-48087994 + 70 7.67e-08 cacacacaca cacacacacaca cacTGCAAGA chr1:240562781-240563281 - 6 7.67e-08 CTCACATATA CACACATACACA CTTAC chr3:58334727-58335227 - 19 7.67e-08 CACACACAGA CACACACACACA CACACACACA chr1:40374331-40374831 - 83 7.67e-08 CTCTCT CACACACACACA CACACACACA chr19:33458234-33458734 - 89 7.67e-08 . CACACATACACA TCATGCGCCA chr12:990671-991171 - 83 7.67e-08 CCTGCA CACACACACACA CTCACACACA chr5:6447839-6448339 + 73 7.67e-08 acacacacac cacacacacaca ccacacacat chr9:129340475-129340975 - 34 7.67e-08 CACACCAACT CACACATACACA ACTCACACAC chr2:219571730-219572230 - 52 7.67e-08 CACAAATTCT CACACACACACA CTCTCTCACA chr19:31464721-31465221 - 70 7.67e-08 CAAACCAATA CACACATACACA CAAACCACTA chrX:156008781-156009281 - 57 1.78e-07 CACACACAGA CACAAACACACA CAGATACAGA chr12:122021704-12202220 - 15 2.29e-07 CACACACACA TACACACACACA CAAAGCCCGG chr1:202205454-202205954 + 37 2.80e-07 acacctcctt caaacatacaca cacaccccta chr22:45979940-45980440 + 18 3.13e-07 ccacacacat cacaaacacaaa aaacacaact chr1:10793916-10794416 - 46 3.80e-07 CACACACGCA TACACATACAAA CACGCACACA chr19:30701035-30701535 + 45 5.03e-07 cacagacgca tacaaacacaaa cacacataca chr19:50134098-50134598 + 64 5.25e-07 actgtctcta caaaaatacaaa aattagctgg chrX:120309457-120309957 - 88 5.76e-07 G CACACACATACA GAGGGAGAGG chr8:28401274-28401774 - 1 5.76e-07 ACACACGCGT CACACACATACA chr1:109910485-109910985 - 69 5.76e-07 AGGCGCCAGA CACACACATACA CACACACACA chr1:236085585-236086085 - 64 5.76e-07 ATTCATGCAG CACACACATACA CCACACACAT chr22:39563942-39564442 - 64 5.76e-07 CACACGATTA CACACACATACA TAACACACAG chr9:133532941-133533441 - 9 7.36e-07 CACACACAGG CACACACACACC CAGTCCCT chr1:228782509-228783009 - 31 7.36e-07 TCACAAACAA CACACACACACC AGGCATCACA chr16:30045348-30045848 - 9 7.36e-07 CCACATACAC CACACACACACC ACATACAC chr22:49975425-49975925 - 41 7.36e-07 ACACACACAC CACACACACACC ACACATGATA chr19:33249720-33250220 + 75 8.50e-07 gcacacacca cacacagacaca cagatacaca chr15:30173017-30173517 - 79 8.50e-07 CCACACACAC CACACAGACACA CACCACACAC chr19:44259443-44259943 - 25 8.64e-07 CCGTCTCTAC TAAAAATACAAA AATTAGCTGG chr6:30907488-30907988 - 1 8.64e-07 CCGTCTTTAC TAAAAATACAAA chr1:161764849-161765349 - 3 8.64e-07 CTGTCTCCAC TAAAAATACAAA AA chr16:31094886-31095386 + 83 8.64e-07 ccatctcaac taaaaatacaaa aattag chr19:39033031-39033531 + 79 8.64e-07 ccgtctctac taaaaatacaaa aattagctgg chr7:74079479-74079979 + 3 8.64e-07 ac taaaaatacaaa aattagccag chr14:34539787-34540287 - 47 8.64e-07 CCGTCTCTAC TAAAAATACAAA ATTAGCCGGG chr19:37210818-37211318 - 46 8.64e-07 GCGTCTCTAC TAAAAATACAAA AAAATTAGCT chr6:28790253-28790753 + 35 8.64e-07 ccgtctctac taaaaatacaaa attagccagg chr7:6448141-6448641 - 36 8.64e-07 TCGTCTCTAC TAAAAATACAAA AATTAGCCGT chr1:236101323-236101823 - 54 1.16e-06 CGGCCACCTT CACACATACAAC ACCCACAAAC chr20:52972201-52972701 - 62 1.51e-06 TCCTCGCACA CACACACTCACA CCCCCCACAT chr7:128360891-128361391 + 82 1.51e-06 acacccccta cacacattcaca cacacag chr22:45290267-45290767 - 85 1.51e-06 TTCT CACACTCACACA CCACTCACAC chr22:24244142-24244642 + 83 1.51e-06 tgcatgcaat cacacataccca gacact chr12:132156858-13215735 + 89 1.59e-06 atgcacacac tacacatacacc chr19:33274033-33274533 - 4 2.03e-06 AGTCACACCC CACACCCACACA GAC chr16:85522953-85523453 - 82 2.03e-06 ACACAGT CACACGCACACA ACACACAGGG chr1:29237080-29237580 - 25 2.03e-06 AGACACTCCC CACACGTACACA GCGCACGGAC chr22:24010862-24011362 + 54 2.81e-06 cacacacaca cacacacgcaca cgcacacgcg chr3:194352620-194353120 - 6 2.81e-06 ACACCTACTG CACACACGCACA CCCAC chr19:36849674-36850174 + 1 2.81e-06 . CACACACACCAA TCTGACCCGC chr1:201435693-201436193 - 1 2.81e-06 GGCACGCGCA CACACATGCACA chr12:122094905-12209540 - 2 2.81e-06 ACCCACACCC CACACACACCAA C chr19:33250574-33251074 + 61 3.11e-06 acccacaccc cacacacagaca ccacactcac chr22:45979332-45979832 + 24 3.75e-06 acactccact caaaaacacacc acacaccaca chr1:31386566-31387066 + 80 3.75e-06 CACCCCTAGG CACAACCACACA GACGACCTC chr10:133010670-13301117 - 31 3.75e-06 AAACACATCA CACAAGCACACA TCACACACGC chr19:6532183-6532683 - 65 4.04e-06 CACAAATATC CAAACACACCCA CATGAACACA chr19:41230377-41230877 - 34 4.78e-06 CACACATAGA CACACATACTCA CACAGAAACA chr12:132951527-13295202 + 8 5.37e-06 catacat gacacatacaca tgtacaacac chr14:103105049-10310554 - 84 6.59e-06 TCTGC CAAACACGCACA CACACAGCCT chr19:6717434-6717934 - 45 7.17e-06 CAATACACAC AAAACACACACA ACACAACACA chr19:39411878-39412378 - 55 7.77e-06 TCAGTTTTTA TAAACTTACACA TCTAATAAAC chr16:89489012-89489512 + 47 1.03e-05 acacatacac cacacacacaGC TACCGCCCTG chr8:629639-630139 + 18 1.09e-05 CGTGACCACC CACACAGACAGA GCTGACTCAC chr19:36604656-36605156 + 19 1.19e-05 ACCTGCTGTG CACACACACCCC CTGCTGTGCA chr19:33506188-33506688 + 58 1.19e-05 ccacacacaa cacactcacacc caccacaccc chr7:66920782-66921282 + 60 1.27e-05 accagaccgg cacacagaccca taaacgtcca chr19:37594258-37594758 + 24 1.27e-05 GCTCCAGGGG CACACTCATAAA TTCGGTGCGG chr16:3263287-3263787 - 50 1.27e-05 TGTCTCTACT AAAAAATACAAA AATTAGCCGG chr18:49019490-49019990 - 71 1.62e-05 ACTCACATAC CACACACACCAC ACACATCACA chr21:6565347-6565847 + 86 1.62e-05 ccacacactc cacacacaccac aca chr5:1950751-1951251 - 86 1.80e-05 TGA CACACGCACAGA TGACACACGC chr16:57628751-57629251 - 78 1.80e-05 CACACTCACT CACACTCTCACA CTCAAACGCT chr12:1605005-1605505 - 5 1.80e-05 CCCTCCCCCA CACACTCTCACA CACA chr12:49967394-49967894 - 27 1.80e-05 CAAGATCCGA CACGCAGACACA GCGACCCCTG chr4:3746647-3747147 - 65 1.80e-05 CTAAGAGATG CACACAGGCACA TCACCCAGAG chr20:62301584-62302084 - 28 1.95e-05 CCGACTCTAC TAAAAATGCAAA AATTAGCCAG chr19:35392891-35393391 - 2 1.95e-05 CACACATGGA GACACATATACA G chr1:28884742-28885242 + 57 2.17e-05 ACTCCCCACG CACAAATTCAGA AACGCAGAGC chr2:28894067-28894567 - 25 2.66e-05 CCGTCTCTAC TAAAAATAAAAA AATTAGCCGT chr3:134795191-134795691 + 65 3.25e-05 cgcaccgccc cacgcgcacaca ctcctgccca chr9:135967568-135968068 - 59 3.25e-05 ATGCACACAA CACGCCCACACA CAGGCGCGCG chr2:45650858-45651358 + 30 3.25e-05 cacacacact cacacacacTGA CGTCTTTTGC chr22:39529079-39529579 - 12 3.25e-05 GGGGAGGATT TACACACAGACC GGAGCTGGCT chr6:159726724-159727224 + 33 3.25e-05 GGATGAGCGT CACGAACACAGA GCGGCCAATC chr1:31387481-31387981 + 12 3.53e-05 CCTCACCATC CACACCCAGACA CATCCCCACG chr4:189233709-189234209 - 7 3.53e-05 AGAGCACTAC TACAACTACACC AAACAC chr4:189234918-189235418 - 22 3.53e-05 AGAGCACTAC TACAACTACACC AAACACCACC chr5:75049730-75050230 - 19 3.53e-05 GTGCATTATG CAAGCACATAAA GTGCTCAGTA chr9:136307196-136307696 + 55 3.53e-05 gcacacacaa tacagacataca acacacacca chr21:34888002-34888502 + 16 3.88e-05 TGCTCCGAGG CACGAACACCCA CGAGCGCCGC chr1:186404352-186404852 - 18 4.26e-05 GAAAATTGTC CACACATTGAAA TTAGGACTAT chr15:84570943-84571443 + 71 4.66e-05 CTCCAGGCTG CACAACCACCAA CTGGTGTGTG chrUn_KI270467v1:2669-31 + 81 5.10e-05 atacactata taataatacaca gtttgggt chr19:36796913-36797413 - 84 5.46e-05 TCTAC TAAAAATACGAA AAATTAACCA chr17:1258901-1259401 - 26 6.37e-05 CCCGTCGCTA CCAAAATACAAA AATTAGCCGG chr19:36772274-36772774 + 24 6.89e-05 GCAGTCCAAC CACACAGTCACC GGTTCTTCAC chr18:63091716-63092216 - 18 7.32e-05 CCACACACAC TACACCCACTCA CATACTACAT chr6:96924554-96925054 + 34 7.92e-05 GTCGCGCGCA CACACGCACGCA GGcacacaca chr1:84298400-84298900 + 75 7.92e-05 TCTGCCCTCC CAAAAACACATC TTGGCCGTGT chr19:30046336-30046836 - 42 8.96e-05 CAAAATTAGT TACAAGCAAACA GCGGGGTATG chr19:53554104-53554604 - 85 1.23e-04 CTGA CACGCATGTACA CCCAGACCGC chr5:181173549-181174049 - 83 3.18e-04 GAAAGG CAAAGGTATAAA TACCCTTGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:40140151-40140651 7.7e-08 45_[+5]_43 chr12:57111963-57112463 7.7e-08 2_[+5]_86 chr1:156661285-156661785 7.7e-08 87_[-5]_1 chr3:48087494-48087994 7.7e-08 69_[+5]_19 chr1:240562781-240563281 7.7e-08 5_[-5]_83 chr3:58334727-58335227 7.7e-08 18_[-5]_70 chr1:40374331-40374831 7.7e-08 82_[-5]_6 chr19:33458234-33458734 7.7e-08 88_[-5] chr12:990671-991171 7.7e-08 82_[-5]_6 chr5:6447839-6448339 7.7e-08 72_[+5]_16 chr9:129340475-129340975 7.7e-08 33_[-5]_55 chr2:219571730-219572230 7.7e-08 51_[-5]_37 chr19:31464721-31465221 7.7e-08 69_[-5]_19 chrX:156008781-156009281 1.8e-07 56_[-5]_32 chr12:122021704-12202220 2.3e-07 14_[-5]_74 chr1:202205454-202205954 2.8e-07 36_[+5]_52 chr22:45979940-45980440 3.1e-07 17_[+5]_71 chr1:10793916-10794416 3.8e-07 45_[-5]_43 chr19:30701035-30701535 5e-07 44_[+5]_44 chr19:50134098-50134598 5.3e-07 63_[+5]_25 chrX:120309457-120309957 5.8e-07 87_[-5]_1 chr8:28401274-28401774 5.8e-07 [-5]_88 chr1:109910485-109910985 5.8e-07 68_[-5]_20 chr1:236085585-236086085 5.8e-07 63_[-5]_25 chr22:39563942-39564442 5.8e-07 63_[-5]_25 chr9:133532941-133533441 7.4e-07 8_[-5]_80 chr1:228782509-228783009 7.4e-07 30_[-5]_58 chr16:30045348-30045848 7.4e-07 8_[-5]_80 chr22:49975425-49975925 7.4e-07 40_[-5]_48 chr19:33249720-33250220 8.5e-07 74_[+5]_14 chr15:30173017-30173517 8.5e-07 78_[-5]_10 chr19:44259443-44259943 8.6e-07 24_[-5]_64 chr6:30907488-30907988 8.6e-07 [-5]_88 chr1:161764849-161765349 8.6e-07 2_[-5]_86 chr16:31094886-31095386 8.6e-07 82_[+5]_6 chr19:39033031-39033531 8.6e-07 78_[+5]_10 chr7:74079479-74079979 8.6e-07 2_[+5]_86 chr14:34539787-34540287 8.6e-07 46_[-5]_42 chr19:37210818-37211318 8.6e-07 45_[-5]_43 chr6:28790253-28790753 8.6e-07 34_[+5]_54 chr7:6448141-6448641 8.6e-07 35_[-5]_53 chr1:236101323-236101823 1.2e-06 53_[-5]_35 chr20:52972201-52972701 1.5e-06 61_[-5]_27 chr7:128360891-128361391 1.5e-06 81_[+5]_7 chr22:45290267-45290767 1.5e-06 84_[-5]_4 chr22:24244142-24244642 1.5e-06 82_[+5]_6 chr12:132156858-13215735 1.6e-06 88_[+5] chr19:33274033-33274533 2e-06 3_[-5]_85 chr16:85522953-85523453 2e-06 81_[-5]_7 chr1:29237080-29237580 2e-06 24_[-5]_64 chr22:24010862-24011362 2.8e-06 53_[+5]_35 chr3:194352620-194353120 2.8e-06 5_[-5]_83 chr19:36849674-36850174 2.8e-06 [+5]_88 chr1:201435693-201436193 2.8e-06 [-5]_88 chr12:122094905-12209540 2.8e-06 1_[-5]_87 chr19:33250574-33251074 3.1e-06 60_[+5]_28 chr22:45979332-45979832 3.8e-06 23_[+5]_65 chr1:31386566-31387066 3.8e-06 79_[+5]_9 chr10:133010670-13301117 3.8e-06 30_[-5]_58 chr19:6532183-6532683 4e-06 64_[-5]_24 chr19:41230377-41230877 4.8e-06 33_[-5]_55 chr12:132951527-13295202 5.4e-06 7_[+5]_81 chr14:103105049-10310554 6.6e-06 83_[-5]_5 chr19:6717434-6717934 7.2e-06 44_[-5]_44 chr19:39411878-39412378 7.8e-06 54_[-5]_34 chr16:89489012-89489512 1e-05 46_[+5]_42 chr8:629639-630139 1.1e-05 17_[+5]_71 chr19:36604656-36605156 1.2e-05 18_[+5]_70 chr19:33506188-33506688 1.2e-05 57_[+5]_31 chr7:66920782-66921282 1.3e-05 59_[+5]_29 chr19:37594258-37594758 1.3e-05 23_[+5]_65 chr16:3263287-3263787 1.3e-05 49_[-5]_39 chr18:49019490-49019990 1.6e-05 70_[-5]_18 chr21:6565347-6565847 1.6e-05 85_[+5]_3 chr5:1950751-1951251 1.8e-05 85_[-5]_3 chr16:57628751-57629251 1.8e-05 77_[-5]_11 chr12:1605005-1605505 1.8e-05 4_[-5]_84 chr12:49967394-49967894 1.8e-05 26_[-5]_62 chr4:3746647-3747147 1.8e-05 64_[-5]_24 chr20:62301584-62302084 1.9e-05 27_[-5]_61 chr19:35392891-35393391 1.9e-05 1_[-5]_87 chr1:28884742-28885242 2.2e-05 56_[+5]_32 chr2:28894067-28894567 2.7e-05 24_[-5]_64 chr3:134795191-134795691 3.2e-05 64_[+5]_24 chr9:135967568-135968068 3.2e-05 58_[-5]_30 chr2:45650858-45651358 3.2e-05 29_[+5]_59 chr22:39529079-39529579 3.2e-05 11_[-5]_77 chr6:159726724-159727224 3.2e-05 32_[+5]_56 chr1:31387481-31387981 3.5e-05 11_[+5]_77 chr4:189233709-189234209 3.5e-05 6_[-5]_82 chr4:189234918-189235418 3.5e-05 21_[-5]_67 chr5:75049730-75050230 3.5e-05 18_[-5]_70 chr9:136307196-136307696 3.5e-05 54_[+5]_34 chr21:34888002-34888502 3.9e-05 15_[+5]_73 chr1:186404352-186404852 4.3e-05 17_[-5]_71 chr15:84570943-84571443 4.7e-05 70_[+5]_18 chrUn_KI270467v1:2669-31 5.1e-05 80_[+5]_8 chr19:36796913-36797413 5.5e-05 83_[-5]_5 chr17:1258901-1259401 6.4e-05 25_[-5]_63 chr19:36772274-36772774 6.9e-05 23_[+5]_65 chr18:63091716-63092216 7.3e-05 17_[-5]_71 chr6:96924554-96925054 7.9e-05 33_[+5]_55 chr1:84298400-84298900 7.9e-05 74_[+5]_14 chr19:30046336-30046836 9e-05 41_[-5]_47 chr19:53554104-53554604 0.00012 84_[-5]_4 chr5:181173549-181174049 0.00032 82_[-5]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACACAYACACA width=12 seqs=106 chr17:40140151-40140651 ( 46) CACACACACACA 1 chr12:57111963-57112463 ( 3) CACACACACACA 1 chr1:156661285-156661785 ( 88) CACACACACACA 1 chr3:48087494-48087994 ( 70) CACACACACACA 1 chr1:240562781-240563281 ( 6) CACACATACACA 1 chr3:58334727-58335227 ( 19) CACACACACACA 1 chr1:40374331-40374831 ( 83) CACACACACACA 1 chr19:33458234-33458734 ( 89) CACACATACACA 1 chr12:990671-991171 ( 83) CACACACACACA 1 chr5:6447839-6448339 ( 73) CACACACACACA 1 chr9:129340475-129340975 ( 34) CACACATACACA 1 chr2:219571730-219572230 ( 52) CACACACACACA 1 chr19:31464721-31465221 ( 70) CACACATACACA 1 chrX:156008781-156009281 ( 57) CACAAACACACA 1 chr12:122021704-12202220 ( 15) TACACACACACA 1 chr1:202205454-202205954 ( 37) CAAACATACACA 1 chr22:45979940-45980440 ( 18) CACAAACACAAA 1 chr1:10793916-10794416 ( 46) TACACATACAAA 1 chr19:30701035-30701535 ( 45) TACAAACACAAA 1 chr19:50134098-50134598 ( 64) CAAAAATACAAA 1 chrX:120309457-120309957 ( 88) CACACACATACA 1 chr8:28401274-28401774 ( 1) CACACACATACA 1 chr1:109910485-109910985 ( 69) CACACACATACA 1 chr1:236085585-236086085 ( 64) CACACACATACA 1 chr22:39563942-39564442 ( 64) CACACACATACA 1 chr9:133532941-133533441 ( 9) CACACACACACC 1 chr1:228782509-228783009 ( 31) CACACACACACC 1 chr16:30045348-30045848 ( 9) CACACACACACC 1 chr22:49975425-49975925 ( 41) CACACACACACC 1 chr19:33249720-33250220 ( 75) CACACAGACACA 1 chr15:30173017-30173517 ( 79) CACACAGACACA 1 chr19:44259443-44259943 ( 25) TAAAAATACAAA 1 chr6:30907488-30907988 ( 1) TAAAAATACAAA 1 chr1:161764849-161765349 ( 3) TAAAAATACAAA 1 chr16:31094886-31095386 ( 83) TAAAAATACAAA 1 chr19:39033031-39033531 ( 79) TAAAAATACAAA 1 chr7:74079479-74079979 ( 3) TAAAAATACAAA 1 chr14:34539787-34540287 ( 47) TAAAAATACAAA 1 chr19:37210818-37211318 ( 46) TAAAAATACAAA 1 chr6:28790253-28790753 ( 35) TAAAAATACAAA 1 chr7:6448141-6448641 ( 36) TAAAAATACAAA 1 chr1:236101323-236101823 ( 54) CACACATACAAC 1 chr20:52972201-52972701 ( 62) CACACACTCACA 1 chr7:128360891-128361391 ( 82) CACACATTCACA 1 chr22:45290267-45290767 ( 85) CACACTCACACA 1 chr22:24244142-24244642 ( 83) CACACATACCCA 1 chr12:132156858-13215735 ( 89) TACACATACACC 1 chr19:33274033-33274533 ( 4) CACACCCACACA 1 chr16:85522953-85523453 ( 82) CACACGCACACA 1 chr1:29237080-29237580 ( 25) CACACGTACACA 1 chr22:24010862-24011362 ( 54) CACACACGCACA 1 chr3:194352620-194353120 ( 6) CACACACGCACA 1 chr19:36849674-36850174 ( 1) CACACACACCAA 1 chr1:201435693-201436193 ( 1) CACACATGCACA 1 chr12:122094905-12209540 ( 2) CACACACACCAA 1 chr19:33250574-33251074 ( 61) CACACACAGACA 1 chr22:45979332-45979832 ( 24) CAAAAACACACC 1 chr1:31386566-31387066 ( 80) CACAACCACACA 1 chr10:133010670-13301117 ( 31) CACAAGCACACA 1 chr19:6532183-6532683 ( 65) CAAACACACCCA 1 chr19:41230377-41230877 ( 34) CACACATACTCA 1 chr12:132951527-13295202 ( 8) GACACATACACA 1 chr14:103105049-10310554 ( 84) CAAACACGCACA 1 chr19:6717434-6717934 ( 45) AAAACACACACA 1 chr19:39411878-39412378 ( 55) TAAACTTACACA 1 chr16:89489012-89489512 ( 47) CACACACACAGC 1 chr8:629639-630139 ( 18) CACACAGACAGA 1 chr19:36604656-36605156 ( 19) CACACACACCCC 1 chr19:33506188-33506688 ( 58) CACACTCACACC 1 chr7:66920782-66921282 ( 60) CACACAGACCCA 1 chr19:37594258-37594758 ( 24) CACACTCATAAA 1 chr16:3263287-3263787 ( 50) AAAAAATACAAA 1 chr18:49019490-49019990 ( 71) CACACACACCAC 1 chr21:6565347-6565847 ( 86) CACACACACCAC 1 chr5:1950751-1951251 ( 86) CACACGCACAGA 1 chr16:57628751-57629251 ( 78) CACACTCTCACA 1 chr12:1605005-1605505 ( 5) CACACTCTCACA 1 chr12:49967394-49967894 ( 27) CACGCAGACACA 1 chr4:3746647-3747147 ( 65) CACACAGGCACA 1 chr20:62301584-62302084 ( 28) TAAAAATGCAAA 1 chr19:35392891-35393391 ( 2) GACACATATACA 1 chr1:28884742-28885242 ( 57) CACAAATTCAGA 1 chr2:28894067-28894567 ( 25) TAAAAATAAAAA 1 chr3:134795191-134795691 ( 65) CACGCGCACACA 1 chr9:135967568-135968068 ( 59) CACGCCCACACA 1 chr2:45650858-45651358 ( 30) CACACACACTGA 1 chr22:39529079-39529579 ( 12) TACACACAGACC 1 chr6:159726724-159727224 ( 33) CACGAACACAGA 1 chr1:31387481-31387981 ( 12) CACACCCAGACA 1 chr4:189233709-189234209 ( 7) TACAACTACACC 1 chr4:189234918-189235418 ( 22) TACAACTACACC 1 chr5:75049730-75050230 ( 19) CAAGCACATAAA 1 chr9:136307196-136307696 ( 55) TACAGACATACA 1 chr21:34888002-34888502 ( 16) CACGAACACCCA 1 chr1:186404352-186404852 ( 18) CACACATTGAAA 1 chr15:84570943-84571443 ( 71) CACAACCACCAA 1 chrUn_KI270467v1:2669-31 ( 81) TAATAATACACA 1 chr19:36796913-36797413 ( 84) TAAAAATACGAA 1 chr17:1258901-1259401 ( 26) CCAAAATACAAA 1 chr19:36772274-36772774 ( 24) CACACAGTCACC 1 chr18:63091716-63092216 ( 18) TACACCCACTCA 1 chr6:96924554-96925054 ( 34) CACACGCACGCA 1 chr1:84298400-84298900 ( 75) CAAAAACACATC 1 chr19:30046336-30046836 ( 42) TACAAGCAAACA 1 chr19:53554104-53554604 ( 85) CACGCATGTACA 1 chr5:181173549-181174049 ( 83) CAAAGGTATAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 10.1549 E= 2.2e-090 -340 127 -400 25 232 -499 -1337 -1337 30 132 -1337 -1337 222 -1337 -219 -439 56 119 -400 -1337 200 -200 -200 -181 -1337 91 -219 89 213 -1337 -219 -159 -340 148 -300 -94 211 -167 -400 -281 46 113 -241 -439 208 -91 -1337 -1337 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 106 E= 2.2e-090 0.018868 0.726415 0.018868 0.235849 0.990566 0.009434 0.000000 0.000000 0.245283 0.754717 0.000000 0.000000 0.924528 0.000000 0.066038 0.009434 0.292453 0.688679 0.018868 0.000000 0.792453 0.075472 0.075472 0.056604 0.000000 0.566038 0.066038 0.367925 0.867925 0.000000 0.066038 0.066038 0.018868 0.839623 0.037736 0.103774 0.858491 0.094340 0.018868 0.028302 0.273585 0.660377 0.056604 0.009434 0.839623 0.160377 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACAYACACA MEME-5 regular expression -------------------------------------------------------------------------------- [CT]A[CA]A[CA]A[CT]ACA[CA]A -------------------------------------------------------------------------------- Time 3416.49 secs. ******************************************************************************** ******************************************************************************** MOTIF GAGRGAGNGRGAGAGDGVGRGR MEME-6 width = 22 sites = 106 llr = 1066 E-value = 1.7e-043 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 Description -------------------------------------------------------------------------------- Simplified A 1723173223172623141534 pos.-specific C 12::1::211:112212311:1 probability G 8186826475917263738375 matrix T :::1::12:::21::2:::1:: bits 2.3 2.1 1.9 1.6 Relative 1.4 Entropy 1.2 * * * (14.5 bits) 0.9 ** * * * * 0.7 *** *** ** * * * ** 0.5 ******* * ***** ****** 0.2 ******* ************** 0.0 ---------------------- Multilevel GAGGGAGGGGGAGAGAGAGAGG consensus A GAAAA G G C GAA sequence C T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chrX:120309457-120309957 - 66 3.40e-13 CACACATACA GAGGGAGAGGGAGAGAGAGAGA GCGCGAGAGC chr1:155244582-155245082 + 68 1.64e-12 gagagcgagc gagagagagagagagagagaga ggagCCGGCG chr19:37293505-37294005 + 31 1.64e-12 gagagagaca gagagagagagagagagagaga gacgtgagag chr1:161097502-161098002 - 1 1.64e-12 GAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGA chr21:32771745-32772245 + 5 1.64e-12 gagc gagagagagagagagagagaga gcgagagaga chr16:981056-981556 + 50 1.64e-12 gtgtgtgtga gagagagagagagagagagaga gagagagaga chr1:226711204-226711704 + 3 1.64e-12 Aa gagagagagagagagagagaga gagagagaga chr10:91608959-91609459 - 21 1.64e-12 GTGTGTGTGA GAGAGAGAGAGAGAGAGAGAGA CAGAGAGACA chr3:17742276-17742776 - 62 7.89e-11 CCTGCAGACT GAGGGAGAGAGAGAGAAAGAGG AGGGGAGGAG chr1:201435693-201436193 + 61 5.76e-10 tgtgtgtgAa gagagagagagaaacagagaga gaaagggaaa chr19:12937967-12938467 + 21 8.99e-10 CCTCCACCTA GAGGGAATGGGAGGGAGAGAAG CTGAGGGCAG chr1:234723932-234724432 + 26 1.40e-09 aggaagggag gagggaggtggagagagagaga AAAAAACCAC chr16:1308129-1308629 + 70 2.61e-09 atgagtgagg gagggaatgagtgagggaggga atgagtgag chr19:35693960-35694460 - 67 8.38e-09 GGCGGAGGAG GAAAGAGGAGGAGAAAGAGAAA AAAGGAGGAG chr22:20496074-20496574 - 14 2.44e-08 GATAGGAAGG GAAGGAATGAGAGAGTGAAGGA GGGAGGGAAT chr3:14178249-14178749 - 5 6.53e-08 GCGTGAGGAG GAGGAGGAGGGTGAGAGCGAGG CCCA chr4:102827310-102827810 - 63 1.04e-07 CGGCGGTGAA GAGGCAGGAGGAGGGGGAGGGG CGGAGCGTGG chr22:30246130-30246630 + 70 1.21e-07 ggagcgagga ggaggaggaggagaaggagagg gggaagaag chr5:41904225-41904725 + 45 2.52e-07 TGAAGATGGT GAGGGAGCGGAGGAgagggagg cgggcggggc chr2:44167721-44168221 - 11 4.39e-07 TGGGGCGCAG GCGAGAGTGGGAAACTGGGAAG GCCGGGCTCT chr19:10006931-10007431 - 58 4.39e-07 GGGAATGTCA GAGGGAGGAGGTCAGAGGGGAA TGTCAGAGGG chr6:85642864-85643364 - 65 5.03e-07 GGAGCGGGGG GCGGGAATAAGAAAGGCCGAGA GAAGGCGGAC chr2:241620253-241620753 + 72 9.67e-07 agtgaggggt gagtgagtcggtgactgagggg tgagtga chr22:41091656-41092156 + 17 1.10e-06 AGTGCTAACT GCGGGAGCCAGAGAGTGCGGAG GGGAGTCGGG chr19:51017177-51017677 + 67 1.10e-06 GCGTGCACCG AAGGGAATGGGAGGAGAAGAAG CGCGTGAAAG chr4:182143958-182144458 - 24 1.24e-06 GTGTGTGTGT GCGGGAGTGTGCGAGGGAGAGG AGGAGAGGAG chr19:35899577-35900077 - 56 1.41e-06 ACAGGACTTG GGGGGAAGGGGAGGATGGAAGA TTCCCTTGCG chr9:87270343-87270843 - 36 1.41e-06 TTGATGTCGT GAAAGGAGGGGAGAGTCCGTGG TCAGGATGAG chr22:44332012-44332512 - 64 1.59e-06 AAAGCGGAAA GAGGGAAGGGAAAAGTAGAAGG AAGGAAAATG chr1:31937361-31937861 - 23 1.80e-06 GGTGGTGGTA GAATGAGTGAGTAAATGGGGGA GGAGAGAGTT chr1:226703224-226703724 - 72 2.03e-06 GCGGGAG GAGAGAGGAGGTGGGGGCCGGG CAGCGACAGG chr12:1605005-1605505 + 44 2.57e-06 gtgtgagagt gagtgtatgtgagagacagagg gtggtgtgtg chr22:17121299-17121799 + 69 2.57e-06 CTGTGGCCTG GAGGAAGCGGGAGGAGGCGCGG GCAGCCGCCA chr19:41884139-41884639 + 73 2.89e-06 GACGCGGCGG CAGGGGTGGGGAGAGTGCGGAG CCCGAG chr7:152464190-152464690 - 15 3.24e-06 ACGGTCGCGG GCGAGAAGGAGCGACGCAGAGA CGGCCGGGGG chr19:10332926-10333426 - 13 3.24e-06 CCGGATCCAC GCGGGATCGGGAGAGACCAAGA GCGGGACGTG chr19:2900237-2900737 - 8 3.63e-06 GTGCTGCGTG GAGGGGAGGGGCGAGCGAGCGG CGTGGGT chr1:225962202-225962702 + 8 4.06e-06 GAAGGAG GAAAGAAGACGAAAGGGAGGAC TGGGGAAAAC chr19:32745700-32746200 + 4 4.54e-06 AGA GAGTGGGAGAGAGACTGGCTGA TGTGGTTATT chr22:29120048-29120548 + 24 5.66e-06 AGAGGTGATG AAGGAAATGGAGGAGGGAGAGG TGATGATGGA chr10:25174260-25174760 - 16 6.31e-06 AGGGTGGGCG GCAGAGGGGGGAGAAGCAGAGA TTCGGTGGCT chr1:52553220-52553720 + 21 6.31e-06 ACACCCACGC GGAGGGAAGGGAGCGCGCGAGA GACACTCGTT chr19:33621865-33622365 - 15 7.03e-06 CCGGAGCGTG CGGGGAGCGAGAGGGCGCGGGG CGGCGTTCCT chr17:68511944-68512444 + 18 7.03e-06 GGCAGGTGAG CAGGAAGGAGGAGAGAACCGGG CTAGGGAGAC chr1:224615746-224616246 - 59 7.81e-06 CGTGCGTCTG GAGGAGGTGGGAAGCTGCGGAA GGGTATGGTG chr19:58305267-58305767 + 58 7.81e-06 ctgatggtgg gagtgaatgagtggACGGGTGG GACCTGTGAG chr1:232630500-232631000 + 15 8.68e-06 CCATCTGAAG AAGACAGCGCGAGGAAGCGAGA CCCTGCTGTG chr1:183635603-183636103 - 28 9.63e-06 GGGAGGCGCC AAGGGAGCGCGAACCTGAGGAG GAAGAAACGG chr10:17201420-17201920 - 56 1.07e-05 CGGCGCGATG GAGGGAGGAGGAGCGACGGACC GGCAGGCCTA chr4:24472673-24473173 + 5 1.07e-05 CGCA GAGGCAgcgcgagcgggcgggc gtgtgcgcgc chr1:32292135-32292635 + 48 1.07e-05 AGGAGGCTGC GAGGAAGGGAGATCGAGGCTGA GACCAAGAGG chr19:34134452-34134952 - 13 1.18e-05 CTGGGCAGAT AAGAGAGCCGGAACAGGCGAGG CGGCCAAAGA chr3:156674006-156674506 - 12 1.31e-05 CCAGACACCC GAGGGAGGATGTGAAACGGAAC GACCCGTTTC chr21:39313558-39314058 + 69 1.45e-05 CCTGGGCGCC GCAGCAGCGAGTGGGGGAGGGG AGGGCGCGTG chr12:67269171-67269671 + 11 1.45e-05 agcgagtgcg gagcgagtgggagcgagACGGC CCTGAGTGGA chr19:35248232-35248732 + 30 1.45e-05 TTTGGGCAGG GAGGGAACAGGTGCGCGGCGGG ACCCGCCCTA chr17:7932003-7932503 + 38 1.76e-05 TTTTGAGCGT AGGGGGAGGCGTGAGAGGGGGA TCTCAGGGGA chr19:47112584-47113084 - 8 1.76e-05 GGCCCCGCGC CAGTGAGCGAGTGACCGCAAGG GTGGGCT chr17:68205246-68205746 + 35 1.76e-05 TGACCGCGCT GCGGGAGAGGGATGAAACAAGA GGGCGGCTGA chr20:58650939-58651439 + 58 1.94e-05 GGGGGCACTC GCGAGGGACGGACAGGAAGAGG GCCAGGGGGG chr10:93702407-93702907 + 69 1.94e-05 ACAGCTCCGG GAAACAAGGGCAGCGGGAGAAA CGGCCCGGAA chr16:30065159-30065659 - 79 1.94e-05 . GGGGGAGGGCGGAACGGGGAAG TGGAGGACGC chr4:157204523-157205023 + 66 1.94e-05 ACCCGGATGC GAGACAGGGGCAGCCAGAGGAG CGGCTGCTGC chr21:43728508-43729008 + 76 2.35e-05 GTCGCGGGCG GCAGGGGGAAGGGAGTCGGAGA GCT chr19:40610107-40610607 - 67 2.58e-05 CCAGGACAGC CGGAGAGGGGCACAGTGAGAGA GGCAATTGTG chr16:88812029-88812529 - 25 2.58e-05 GGATCTCGGC CAATAAAGGAGAAAGGGCGCGG CCCGTACGCG chr6:27312570-27313070 - 50 3.11e-05 TCACGATCTG CAAAAAAAGAGAAACGCGGAAA TCCTCAATCA chr12:8697809-8698309 + 77 3.40e-05 gacggGACGC GAGGCTGTGAGAAACTGGGCGA GT chr6:35259421-35259921 + 59 3.40e-05 GAGGCGCGCC AAGAGGAAAGGAAAGTGCGGCG GCCCTGGAAC chr19:40284973-40285473 - 66 3.40e-05 CCGGGAAACA CAAGGAAAGGGAACCAGCGCAG CGTGGCGATG chr14:103520948-10352144 + 50 3.40e-05 CGCGAGGGGG GCGAGAGGGAAAGCGGAGGTAG CGGGGAGGGA chr15:72230356-72230856 + 1 3.73e-05 . GAGGGAACTGGGGCGCGGGAAG GGCGGTCGCG chr19:38336452-38336952 + 69 4.07e-05 GGGAACTTAA GAGGGGGACTGTCAAAGCGAGA AATAGAAACC chr14:22982619-22983119 + 8 4.07e-05 GGAATAG GAAAGAGTGTGGGGGTAGGGGA CGGGGACTCT chr19:10416565-10417065 + 23 4.07e-05 CGCCCCAGGA GAGGCAATAGGCAAGTGGCGGG GGCGGGTTCT chr20:62407288-62407788 - 37 4.07e-05 GCCATACAGC AAAGGGAACAGAAAGCGAGAGC CCCGCGGCCG chr6:30556185-30556685 + 25 4.45e-05 CTCCAGGAGC GAGGCGAGAGGATGATGCGGGG TGGGCTACTG chr1:109910485-109910985 + 3 4.45e-05 AG GCGGGGGAAGGCGGCTGAGTGG GCCTCTGGAg chr19:35947339-35947839 + 30 4.86e-05 CCAGTTGCTC CCATGAGGGGGAGCCAGAGGGC ACTGTTCgtg chr9:137240306-137240806 + 42 4.86e-05 CGTGCGGCAC CCGGGAGCAGGAAACTCCGTGG CCTCTGCGGC chr19:40715622-40716122 - 2 4.86e-05 CACACACACA GAGAAAGAAAGATAGGATGGGA G chr20:2752109-2752609 - 20 5.30e-05 TAGCCTGCGA GAGAGAGCGCGGCCGTCAGGGG GCGGTGCCGG chr19:5308852-5309352 + 79 5.30e-05 CTGGCAGCTC CGGGGGTGGAGAGAGAAGGGAG chr19:2945121-2945621 + 14 6.29e-05 GGCCCCTCGT GCGGGGAGGAGAGGAAGGGCAC GGAGTCCCAT chr5:5340242-5340742 - 36 6.29e-05 CCACACACAC GAGGGAGCCAGCGGGGGCCTGG GGACGCTGCA chr19:41859745-41860245 - 68 6.85e-05 CCTTCTCCCG GAGTGTAATAGAGAGAGGATAG AGAGCTCCTG chr19:19192074-19192574 + 52 6.85e-05 GCGCAGTGAG GAGGGGGCGCGACGGCCAGGAG GCTGGTGGAG chr15:77420546-77421046 + 79 7.44e-05 AAAGGTGGTT AAGAGATTAGGTAAAGAAAAGG chr15:83207965-83208465 - 37 7.44e-05 CGAGTCAGCG GGAGGTGGGCGTGGGAGCGGGG GGCGCGAGTG chr7:158829489-158829989 + 39 8.08e-05 GTCTCGGCTG GCGGGAGCCGGGGACGGGAAAG GAGAGTGCTC chr1:55378433-55378933 - 76 8.08e-05 AAT GAGTGGGGCCGATCCAGGGAGA GGAGAGCAAC chr19:35717074-35717574 - 77 1.03e-04 GA GAGGAGGCGGGTGGCCGAAAGC AGGGTCGGAG chr8:94719600-94720100 + 73 1.03e-04 GGAGGGGGGT GGGTCAGGAAGTGGGGGCGCGG CGGCCA chr12:124914541-12491504 - 3 1.12e-04 GTTTTCTTTC CAGAGAGCGGAACAGGCGAGGA AA chr1:183471813-183472313 + 56 1.21e-04 AAATCGGCAG GAGTGATAAGAAGGGGGAAGAC TTTGAGTGTA chr5:173284358-173284858 - 36 1.21e-04 AATGATGGGT GGGTGAGTGGATGGATGCGTAG ATGAATGGGT chr5:112420096-112420596 + 30 1.30e-04 CCTGGAGGCT GGGTGGGGAGAAGAGGACGCGG TGCTGCTCGG chr1:225653482-225653982 + 45 1.41e-04 CGGTCTCAGG ACGGGGATGAGGGAATCGGGGG GCATCCCGGT chr19:12847530-12848030 - 1 1.77e-04 GGGGCGCGCG GGGATAAGGCGAGCGAGAGTGC chr19:43640007-43640507 + 18 1.90e-04 GAGGCTGTGC GAGGGTGGGGGCGCGGGCGTCG TGGGGTGCGG chr16:3457819-3458319 - 74 2.05e-04 GGAGC CGGGAAGTGGGACCGCGCGGAG CCCGCAACGA chr1:25998132-25998632 - 41 2.05e-04 TGAGGAGGGT GAGGCGGAGGGTTACGCACGGG ACTAAGGCAA chr19:2095991-2096491 - 42 2.20e-04 GTACCGGGAG GGGCGAAGGCGGGCGGCAGAGG CGATCAGGTG chr17:49192119-49192619 + 52 2.20e-04 ACCAGAAACG CCGGGAACACGAAGGACGCAGA AGCCCTCGCC chr7:113118414-113118914 + 66 2.92e-04 TAGCGGAGGC GAAGAGTCGCGAACGCGCGGGA CTTCCTTTCC chr5:139341647-139342147 + 21 3.35e-04 GTTTGGACTG GAGAAGGGAGGCGGCGGGCGAA GCGCACGTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:120309457-120309957 3.4e-13 65_[-6]_13 chr1:155244582-155245082 1.6e-12 67_[+6]_11 chr19:37293505-37294005 1.6e-12 30_[+6]_48 chr1:161097502-161098002 1.6e-12 [-6]_78 chr21:32771745-32772245 1.6e-12 4_[+6]_74 chr16:981056-981556 1.6e-12 49_[+6]_29 chr1:226711204-226711704 1.6e-12 2_[+6]_76 chr10:91608959-91609459 1.6e-12 20_[-6]_58 chr3:17742276-17742776 7.9e-11 61_[-6]_17 chr1:201435693-201436193 5.8e-10 60_[+6]_18 chr19:12937967-12938467 9e-10 20_[+6]_58 chr1:234723932-234724432 1.4e-09 25_[+6]_53 chr16:1308129-1308629 2.6e-09 69_[+6]_9 chr19:35693960-35694460 8.4e-09 66_[-6]_12 chr22:20496074-20496574 2.4e-08 13_[-6]_65 chr3:14178249-14178749 6.5e-08 4_[-6]_74 chr4:102827310-102827810 1e-07 62_[-6]_16 chr22:30246130-30246630 1.2e-07 69_[+6]_9 chr5:41904225-41904725 2.5e-07 44_[+6]_34 chr2:44167721-44168221 4.4e-07 10_[-6]_68 chr19:10006931-10007431 4.4e-07 57_[-6]_21 chr6:85642864-85643364 5e-07 64_[-6]_14 chr2:241620253-241620753 9.7e-07 71_[+6]_7 chr22:41091656-41092156 1.1e-06 16_[+6]_62 chr19:51017177-51017677 1.1e-06 66_[+6]_12 chr4:182143958-182144458 1.2e-06 23_[-6]_55 chr19:35899577-35900077 1.4e-06 55_[-6]_23 chr9:87270343-87270843 1.4e-06 35_[-6]_43 chr22:44332012-44332512 1.6e-06 63_[-6]_15 chr1:31937361-31937861 1.8e-06 22_[-6]_56 chr1:226703224-226703724 2e-06 71_[-6]_7 chr12:1605005-1605505 2.6e-06 43_[+6]_35 chr22:17121299-17121799 2.6e-06 68_[+6]_10 chr19:41884139-41884639 2.9e-06 72_[+6]_6 chr7:152464190-152464690 3.2e-06 14_[-6]_64 chr19:10332926-10333426 3.2e-06 12_[-6]_66 chr19:2900237-2900737 3.6e-06 7_[-6]_71 chr1:225962202-225962702 4.1e-06 7_[+6]_71 chr19:32745700-32746200 4.5e-06 3_[+6]_75 chr22:29120048-29120548 5.7e-06 23_[+6]_55 chr10:25174260-25174760 6.3e-06 15_[-6]_63 chr1:52553220-52553720 6.3e-06 20_[+6]_58 chr19:33621865-33622365 7e-06 14_[-6]_64 chr17:68511944-68512444 7e-06 17_[+6]_61 chr1:224615746-224616246 7.8e-06 58_[-6]_20 chr19:58305267-58305767 7.8e-06 57_[+6]_21 chr1:232630500-232631000 8.7e-06 14_[+6]_64 chr1:183635603-183636103 9.6e-06 27_[-6]_51 chr10:17201420-17201920 1.1e-05 55_[-6]_23 chr4:24472673-24473173 1.1e-05 4_[+6]_74 chr1:32292135-32292635 1.1e-05 47_[+6]_31 chr19:34134452-34134952 1.2e-05 12_[-6]_66 chr3:156674006-156674506 1.3e-05 11_[-6]_67 chr21:39313558-39314058 1.4e-05 68_[+6]_10 chr12:67269171-67269671 1.4e-05 10_[+6]_68 chr19:35248232-35248732 1.4e-05 29_[+6]_49 chr17:7932003-7932503 1.8e-05 37_[+6]_41 chr19:47112584-47113084 1.8e-05 7_[-6]_71 chr17:68205246-68205746 1.8e-05 34_[+6]_44 chr20:58650939-58651439 1.9e-05 57_[+6]_21 chr10:93702407-93702907 1.9e-05 68_[+6]_10 chr16:30065159-30065659 1.9e-05 78_[-6] chr4:157204523-157205023 1.9e-05 65_[+6]_13 chr21:43728508-43729008 2.3e-05 75_[+6]_3 chr19:40610107-40610607 2.6e-05 66_[-6]_12 chr16:88812029-88812529 2.6e-05 24_[-6]_54 chr6:27312570-27313070 3.1e-05 49_[-6]_29 chr12:8697809-8698309 3.4e-05 76_[+6]_2 chr6:35259421-35259921 3.4e-05 58_[+6]_20 chr19:40284973-40285473 3.4e-05 65_[-6]_13 chr14:103520948-10352144 3.4e-05 49_[+6]_29 chr15:72230356-72230856 3.7e-05 [+6]_78 chr19:38336452-38336952 4.1e-05 68_[+6]_10 chr14:22982619-22983119 4.1e-05 7_[+6]_71 chr19:10416565-10417065 4.1e-05 22_[+6]_56 chr20:62407288-62407788 4.1e-05 36_[-6]_42 chr6:30556185-30556685 4.5e-05 24_[+6]_54 chr1:109910485-109910985 4.5e-05 2_[+6]_76 chr19:35947339-35947839 4.9e-05 29_[+6]_49 chr9:137240306-137240806 4.9e-05 41_[+6]_37 chr19:40715622-40716122 4.9e-05 1_[-6]_77 chr20:2752109-2752609 5.3e-05 19_[-6]_59 chr19:5308852-5309352 5.3e-05 78_[+6] chr19:2945121-2945621 6.3e-05 13_[+6]_65 chr5:5340242-5340742 6.3e-05 35_[-6]_43 chr19:41859745-41860245 6.8e-05 67_[-6]_11 chr19:19192074-19192574 6.8e-05 51_[+6]_27 chr15:77420546-77421046 7.4e-05 78_[+6] chr15:83207965-83208465 7.4e-05 36_[-6]_42 chr7:158829489-158829989 8.1e-05 38_[+6]_40 chr1:55378433-55378933 8.1e-05 75_[-6]_3 chr19:35717074-35717574 0.0001 76_[-6]_2 chr8:94719600-94720100 0.0001 72_[+6]_6 chr12:124914541-12491504 0.00011 2_[-6]_76 chr1:183471813-183472313 0.00012 55_[+6]_23 chr5:173284358-173284858 0.00012 35_[-6]_43 chr5:112420096-112420596 0.00013 29_[+6]_49 chr1:225653482-225653982 0.00014 44_[+6]_34 chr19:12847530-12848030 0.00018 [-6]_78 chr19:43640007-43640507 0.00019 17_[+6]_61 chr16:3457819-3458319 0.0002 73_[-6]_5 chr1:25998132-25998632 0.0002 40_[-6]_38 chr19:2095991-2096491 0.00022 41_[-6]_37 chr17:49192119-49192619 0.00022 51_[+6]_27 chr7:113118414-113118914 0.00029 65_[+6]_13 chr5:139341647-139342147 0.00033 20_[+6]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAGRGAGNGRGAGAGDGVGRGR width=22 seqs=106 chrX:120309457-120309957 ( 66) GAGGGAGAGGGAGAGAGAGAGA 1 chr1:155244582-155245082 ( 68) GAGAGAGAGAGAGAGAGAGAGA 1 chr19:37293505-37294005 ( 31) GAGAGAGAGAGAGAGAGAGAGA 1 chr1:161097502-161098002 ( 1) GAGAGAGAGAGAGAGAGAGAGA 1 chr21:32771745-32772245 ( 5) GAGAGAGAGAGAGAGAGAGAGA 1 chr16:981056-981556 ( 50) GAGAGAGAGAGAGAGAGAGAGA 1 chr1:226711204-226711704 ( 3) GAGAGAGAGAGAGAGAGAGAGA 1 chr10:91608959-91609459 ( 21) GAGAGAGAGAGAGAGAGAGAGA 1 chr3:17742276-17742776 ( 62) GAGGGAGAGAGAGAGAAAGAGG 1 chr1:201435693-201436193 ( 61) GAGAGAGAGAGAAACAGAGAGA 1 chr19:12937967-12938467 ( 21) GAGGGAATGGGAGGGAGAGAAG 1 chr1:234723932-234724432 ( 26) GAGGGAGGTGGAGAGAGAGAGA 1 chr16:1308129-1308629 ( 70) GAGGGAATGAGTGAGGGAGGGA 1 chr19:35693960-35694460 ( 67) GAAAGAGGAGGAGAAAGAGAAA 1 chr22:20496074-20496574 ( 14) GAAGGAATGAGAGAGTGAAGGA 1 chr3:14178249-14178749 ( 5) GAGGAGGAGGGTGAGAGCGAGG 1 chr4:102827310-102827810 ( 63) GAGGCAGGAGGAGGGGGAGGGG 1 chr22:30246130-30246630 ( 70) GGAGGAGGAGGAGAAGGAGAGG 1 chr5:41904225-41904725 ( 45) GAGGGAGCGGAGGAGAGGGAGG 1 chr2:44167721-44168221 ( 11) GCGAGAGTGGGAAACTGGGAAG 1 chr19:10006931-10007431 ( 58) GAGGGAGGAGGTCAGAGGGGAA 1 chr6:85642864-85643364 ( 65) GCGGGAATAAGAAAGGCCGAGA 1 chr2:241620253-241620753 ( 72) GAGTGAGTCGGTGACTGAGGGG 1 chr22:41091656-41092156 ( 17) GCGGGAGCCAGAGAGTGCGGAG 1 chr19:51017177-51017677 ( 67) AAGGGAATGGGAGGAGAAGAAG 1 chr4:182143958-182144458 ( 24) GCGGGAGTGTGCGAGGGAGAGG 1 chr19:35899577-35900077 ( 56) GGGGGAAGGGGAGGATGGAAGA 1 chr9:87270343-87270843 ( 36) GAAAGGAGGGGAGAGTCCGTGG 1 chr22:44332012-44332512 ( 64) GAGGGAAGGGAAAAGTAGAAGG 1 chr1:31937361-31937861 ( 23) GAATGAGTGAGTAAATGGGGGA 1 chr1:226703224-226703724 ( 72) GAGAGAGGAGGTGGGGGCCGGG 1 chr12:1605005-1605505 ( 44) GAGTGTATGTGAGAGACAGAGG 1 chr22:17121299-17121799 ( 69) GAGGAAGCGGGAGGAGGCGCGG 1 chr19:41884139-41884639 ( 73) CAGGGGTGGGGAGAGTGCGGAG 1 chr7:152464190-152464690 ( 15) GCGAGAAGGAGCGACGCAGAGA 1 chr19:10332926-10333426 ( 13) GCGGGATCGGGAGAGACCAAGA 1 chr19:2900237-2900737 ( 8) GAGGGGAGGGGCGAGCGAGCGG 1 chr1:225962202-225962702 ( 8) GAAAGAAGACGAAAGGGAGGAC 1 chr19:32745700-32746200 ( 4) GAGTGGGAGAGAGACTGGCTGA 1 chr22:29120048-29120548 ( 24) AAGGAAATGGAGGAGGGAGAGG 1 chr10:25174260-25174760 ( 16) GCAGAGGGGGGAGAAGCAGAGA 1 chr1:52553220-52553720 ( 21) GGAGGGAAGGGAGCGCGCGAGA 1 chr19:33621865-33622365 ( 15) CGGGGAGCGAGAGGGCGCGGGG 1 chr17:68511944-68512444 ( 18) CAGGAAGGAGGAGAGAACCGGG 1 chr1:224615746-224616246 ( 59) GAGGAGGTGGGAAGCTGCGGAA 1 chr19:58305267-58305767 ( 58) GAGTGAATGAGTGGACGGGTGG 1 chr1:232630500-232631000 ( 15) AAGACAGCGCGAGGAAGCGAGA 1 chr1:183635603-183636103 ( 28) AAGGGAGCGCGAACCTGAGGAG 1 chr10:17201420-17201920 ( 56) GAGGGAGGAGGAGCGACGGACC 1 chr4:24472673-24473173 ( 5) GAGGCAGCGCGAGCGGGCGGGC 1 chr1:32292135-32292635 ( 48) GAGGAAGGGAGATCGAGGCTGA 1 chr19:34134452-34134952 ( 13) AAGAGAGCCGGAACAGGCGAGG 1 chr3:156674006-156674506 ( 12) GAGGGAGGATGTGAAACGGAAC 1 chr21:39313558-39314058 ( 69) GCAGCAGCGAGTGGGGGAGGGG 1 chr12:67269171-67269671 ( 11) GAGCGAGTGGGAGCGAGACGGC 1 chr19:35248232-35248732 ( 30) GAGGGAACAGGTGCGCGGCGGG 1 chr17:7932003-7932503 ( 38) AGGGGGAGGCGTGAGAGGGGGA 1 chr19:47112584-47113084 ( 8) CAGTGAGCGAGTGACCGCAAGG 1 chr17:68205246-68205746 ( 35) GCGGGAGAGGGATGAAACAAGA 1 chr20:58650939-58651439 ( 58) GCGAGGGACGGACAGGAAGAGG 1 chr10:93702407-93702907 ( 69) GAAACAAGGGCAGCGGGAGAAA 1 chr16:30065159-30065659 ( 79) GGGGGAGGGCGGAACGGGGAAG 1 chr4:157204523-157205023 ( 66) GAGACAGGGGCAGCCAGAGGAG 1 chr21:43728508-43729008 ( 76) GCAGGGGGAAGGGAGTCGGAGA 1 chr19:40610107-40610607 ( 67) CGGAGAGGGGCACAGTGAGAGA 1 chr16:88812029-88812529 ( 25) CAATAAAGGAGAAAGGGCGCGG 1 chr6:27312570-27313070 ( 50) CAAAAAAAGAGAAACGCGGAAA 1 chr12:8697809-8698309 ( 77) GAGGCTGTGAGAAACTGGGCGA 1 chr6:35259421-35259921 ( 59) AAGAGGAAAGGAAAGTGCGGCG 1 chr19:40284973-40285473 ( 66) CAAGGAAAGGGAACCAGCGCAG 1 chr14:103520948-10352144 ( 50) GCGAGAGGGAAAGCGGAGGTAG 1 chr15:72230356-72230856 ( 1) GAGGGAACTGGGGCGCGGGAAG 1 chr19:38336452-38336952 ( 69) GAGGGGGACTGTCAAAGCGAGA 1 chr14:22982619-22983119 ( 8) GAAAGAGTGTGGGGGTAGGGGA 1 chr19:10416565-10417065 ( 23) GAGGCAATAGGCAAGTGGCGGG 1 chr20:62407288-62407788 ( 37) AAAGGGAACAGAAAGCGAGAGC 1 chr6:30556185-30556685 ( 25) GAGGCGAGAGGATGATGCGGGG 1 chr1:109910485-109910985 ( 3) GCGGGGGAAGGCGGCTGAGTGG 1 chr19:35947339-35947839 ( 30) CCATGAGGGGGAGCCAGAGGGC 1 chr9:137240306-137240806 ( 42) CCGGGAGCAGGAAACTCCGTGG 1 chr19:40715622-40716122 ( 2) GAGAAAGAAAGATAGGATGGGA 1 chr20:2752109-2752609 ( 20) GAGAGAGCGCGGCCGTCAGGGG 1 chr19:5308852-5309352 ( 79) CGGGGGTGGAGAGAGAAGGGAG 1 chr19:2945121-2945621 ( 14) GCGGGGAGGAGAGGAAGGGCAC 1 chr5:5340242-5340742 ( 36) GAGGGAGCCAGCGGGGGCCTGG 1 chr19:41859745-41860245 ( 68) GAGTGTAATAGAGAGAGGATAG 1 chr19:19192074-19192574 ( 52) GAGGGGGCGCGACGGCCAGGAG 1 chr15:77420546-77421046 ( 79) AAGAGATTAGGTAAAGAAAAGG 1 chr15:83207965-83208465 ( 37) GGAGGTGGGCGTGGGAGCGGGG 1 chr7:158829489-158829989 ( 39) GCGGGAGCCGGGGACGGGAAAG 1 chr1:55378433-55378933 ( 76) GAGTGGGGCCGATCCAGGGAGA 1 chr19:35717074-35717574 ( 77) GAGGAGGCGGGTGGCCGAAAGC 1 chr8:94719600-94720100 ( 73) GGGTCAGGAAGTGGGGGCGCGG 1 chr12:124914541-12491504 ( 3) CAGAGAGCGGAACAGGCGAGGA 1 chr1:183471813-183472313 ( 56) GAGTGATAAGAAGGGGGAAGAC 1 chr5:173284358-173284858 ( 36) GGGTGAGTGGATGGATGCGTAG 1 chr5:112420096-112420596 ( 30) GGGTGGGGAGAAGAGGACGCGG 1 chr1:225653482-225653982 ( 45) ACGGGGATGAGGGAATCGGGGG 1 chr19:12847530-12848030 ( 1) GGGATAAGGCGAGCGAGAGTGC 1 chr19:43640007-43640507 ( 18) GAGGGTGGGGGCGCGGGCGTCG 1 chr16:3457819-3458319 ( 74) CGGGAAGTGGGACCGCGCGGAG 1 chr1:25998132-25998632 ( 41) GAGGCGGAGGGTTACGCACGGG 1 chr19:2095991-2096491 ( 42) GGGCGAAGGCGGGCGGCAGAGG 1 chr17:49192119-49192619 ( 52) CCGGGAACACGAAGGACGCAGA 1 chr7:113118414-113118914 ( 66) GAAGAGTCGCGAACGCGCGGGA 1 chr5:139341647-139342147 ( 21) GAGAAGGGAGGCGGCGGGCGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 9.98274 E= 1.7e-043 -107 -119 136 -1337 177 -75 -109 -1337 -15 -1337 145 -1337 51 -400 91 -59 -59 -154 132 -439 183 -1337 -30 -207 60 -1337 109 -181 25 -54 25 0 19 -183 113 -281 69 -119 73 -207 -140 -341 157 -1337 171 -200 -167 -15 0 -200 115 -181 151 -60 -35 -1337 -23 -60 107 -1337 81 -141 5 19 -81 -83 125 -1337 106 -4 -9 -439 -81 -154 138 -1337 122 -200 21 -81 36 -341 125 -1337 93 -154 78 -1337 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 106 E= 1.7e-043 0.094340 0.132075 0.773585 0.000000 0.679245 0.179245 0.141509 0.000000 0.179245 0.000000 0.820755 0.000000 0.283019 0.018868 0.566038 0.132075 0.132075 0.103774 0.754717 0.009434 0.707547 0.000000 0.245283 0.047170 0.301887 0.000000 0.641509 0.056604 0.235849 0.207547 0.358491 0.198113 0.226415 0.084906 0.660377 0.028302 0.320755 0.132075 0.500000 0.047170 0.075472 0.028302 0.896226 0.000000 0.650943 0.075472 0.094340 0.179245 0.198113 0.075472 0.669811 0.056604 0.566038 0.198113 0.235849 0.000000 0.169811 0.198113 0.632075 0.000000 0.349057 0.113208 0.311321 0.226415 0.113208 0.169811 0.716981 0.000000 0.415094 0.292453 0.283019 0.009434 0.113208 0.103774 0.783019 0.000000 0.462264 0.075472 0.349057 0.113208 0.254717 0.028302 0.716981 0.000000 0.377358 0.103774 0.518868 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGRGAGNGRGAGAGDGVGRGR MEME-6 regular expression -------------------------------------------------------------------------------- GAG[GA]G[AG][GA][GAC][GA][GA]GAG[AG]G[AGT]G[ACG]G[AG][GA][GA] -------------------------------------------------------------------------------- Time 4056.64 secs. ******************************************************************************** ******************************************************************************** MOTIF YGHGCCACCACGCCCGGCTAAT MEME-7 width = 22 sites = 23 llr = 445 E-value = 1.3e-054 ******************************************************************************** -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 Description -------------------------------------------------------------------------------- Simplified A ::32::a::7:3:::3:::791 pos.-specific C 424:aa:aa:a:9a7::a32:1 probability G :7:8:::::3:7:::7a::::1 matrix T 6:3:::::::::1:2:::71:7 bits 2.3 2.1 * 1.9 * 1.6 * * * * * Relative 1.4 ***** * ** ** * Entropy 1.2 ******** ** *** * (27.9 bits) 0.9 * ************ ****** 0.7 ** ******************* 0.5 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TGCGCCACCACGCCCGGCTAAT consensus CCA G A TA C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr19:44259443-44259943 + 2 8.01e-13 a tgtgccaccacgcccagctaat ttttgtattt chr16:3263287-3263787 + 27 1.92e-12 actacaggcg cgcgccaccacgcccggctaat ttttgtattt chr19:50134098-50134598 - 77 2.39e-12 CG TGTGCCACCACACCCAGCTAAT TTTTGTATTT chr6:28790253-28790753 - 47 2.39e-12 ATTACAGGCA TGCGCCACCACGCCTGGCTAAT TTTGTATTTT chr22:37844448-37844948 + 68 3.14e-12 actacaggcg cgcgccaccacgcccagctaat ttttgtattt chr17:1258901-1259401 + 3 1.34e-11 cg cccgccaccacgcccggctaat ttttgtattt chr7:74079479-74079979 - 16 4.31e-11 ATTACAGGTG CCTGCCACCACGCCTGGCTAAT TTTTGTATTT chr19:37210818-37211318 + 21 8.60e-11 attacaggca agcgccaccacacccagctaat ttttttgtat chr14:34539787-34540287 + 25 1.11e-10 attacaggca tacaccaccacgcccggctaat tttgtatttt chr9:109244382-109244882 + 3 1.86e-10 ca cgtgccaccacaccccgctaat tttGAAGGAA chr12:48716916-48717416 - 26 7.84e-10 ATTACAGGCG TGAACCACCGCGCCCGGCCCAT CTGCCCCATT chr14:103075879-10307637 - 6 8.51e-10 ATTACAGGCA CCCACCACCACGCCAGGCTAAT TTTGT chr9:131373516-131374016 - 59 1.02e-09 ATTACAGGCG TGAGCCACCACGCCCGGCCTAG ACGAGCGATC chr17:4143132-4143632 - 44 1.69e-09 ATTACAGGCA CGCGCCCCCACGTCCGGCTAAT ATTTTGTATT chr6:31197093-31197593 + 75 2.73e-09 actacaggcg cctacgaccacacccggctaat tttt chr6:32130532-32131032 - 7 2.73e-09 ATTACAGGCG TGAGCCACCGCGCCCGGCCCAC CTTTTT chr16:30598236-30598736 - 13 3.70e-09 ATTACAGGCG TGAGCCACCGCTCCCAGCCAAA TCCCATCTTT chr19:39073279-39073779 + 68 3.70e-09 attacaggca tgagccaccgcacctggcttag ctattcttct chr20:62301584-62302084 + 5 4.00e-09 ggca tgtgccagcatacctggctaat ttttgcattt chr19:36796913-36797413 + 60 4.62e-09 actataggcg cccgccaccacgtctggttaat ttttcgtatt chr19:41262494-41262994 - 61 2.58e-08 ATTACAGGCG TGAGCCACCGCGCCCGGCCCCA ATTCCGATCT chr17:75905090-75905590 - 11 2.91e-08 ATTCCCGGCG TGAGCCACCGCGCCCAGCCCTC AATCTGGGTT chr1:59814075-59814575 + 63 4.58e-08 attacaggcg tgagccacctcgcccagccGGT AGGATCTATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:44259443-44259943 8e-13 1_[+7]_77 chr16:3263287-3263787 1.9e-12 26_[+7]_52 chr19:50134098-50134598 2.4e-12 76_[-7]_2 chr6:28790253-28790753 2.4e-12 46_[-7]_32 chr22:37844448-37844948 3.1e-12 67_[+7]_11 chr17:1258901-1259401 1.3e-11 2_[+7]_76 chr7:74079479-74079979 4.3e-11 15_[-7]_63 chr19:37210818-37211318 8.6e-11 20_[+7]_58 chr14:34539787-34540287 1.1e-10 24_[+7]_54 chr9:109244382-109244882 1.9e-10 2_[+7]_76 chr12:48716916-48717416 7.8e-10 25_[-7]_53 chr14:103075879-10307637 8.5e-10 5_[-7]_73 chr9:131373516-131374016 1e-09 58_[-7]_20 chr17:4143132-4143632 1.7e-09 43_[-7]_35 chr6:31197093-31197593 2.7e-09 74_[+7]_4 chr6:32130532-32131032 2.7e-09 6_[-7]_72 chr16:30598236-30598736 3.7e-09 12_[-7]_66 chr19:39073279-39073779 3.7e-09 67_[+7]_11 chr20:62301584-62302084 4e-09 4_[+7]_74 chr19:36796913-36797413 4.6e-09 59_[+7]_19 chr19:41262494-41262994 2.6e-08 60_[-7]_18 chr17:75905090-75905590 2.9e-08 10_[-7]_68 chr1:59814075-59814575 4.6e-08 62_[+7]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YGHGCCACCACGCCCGGCTAAT width=22 seqs=23 chr19:44259443-44259943 ( 2) TGTGCCACCACGCCCAGCTAAT 1 chr16:3263287-3263787 ( 27) CGCGCCACCACGCCCGGCTAAT 1 chr19:50134098-50134598 ( 77) TGTGCCACCACACCCAGCTAAT 1 chr6:28790253-28790753 ( 47) TGCGCCACCACGCCTGGCTAAT 1 chr22:37844448-37844948 ( 68) CGCGCCACCACGCCCAGCTAAT 1 chr17:1258901-1259401 ( 3) CCCGCCACCACGCCCGGCTAAT 1 chr7:74079479-74079979 ( 16) CCTGCCACCACGCCTGGCTAAT 1 chr19:37210818-37211318 ( 21) AGCGCCACCACACCCAGCTAAT 1 chr14:34539787-34540287 ( 25) TACACCACCACGCCCGGCTAAT 1 chr9:109244382-109244882 ( 3) CGTGCCACCACACCCCGCTAAT 1 chr12:48716916-48717416 ( 26) TGAACCACCGCGCCCGGCCCAT 1 chr14:103075879-10307637 ( 6) CCCACCACCACGCCAGGCTAAT 1 chr9:131373516-131374016 ( 59) TGAGCCACCACGCCCGGCCTAG 1 chr17:4143132-4143632 ( 44) CGCGCCCCCACGTCCGGCTAAT 1 chr6:31197093-31197593 ( 75) CCTACGACCACACCCGGCTAAT 1 chr6:32130532-32131032 ( 7) TGAGCCACCGCGCCCGGCCCAC 1 chr16:30598236-30598736 ( 13) TGAGCCACCGCTCCCAGCCAAA 1 chr19:39073279-39073779 ( 68) TGAGCCACCGCACCTGGCTTAG 1 chr20:62301584-62302084 ( 5) TGTGCCAGCATACCTGGCTAAT 1 chr19:36796913-36797413 ( 60) CCCGCCACCACGTCTGGTTAAT 1 chr19:41262494-41262994 ( 61) TGAGCCACCGCGCCCGGCCCCA 1 chr17:75905090-75905590 ( 11) TGAGCCACCGCGCCCAGCCCTC 1 chr1:59814075-59814575 ( 63) TGAGCCACCTCGCCCAGCCGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 11.4111 E= 1.3e-054 -219 38 -1117 151 -219 -47 129 -1117 81 38 -1117 39 -19 -1117 145 -1117 -1117 173 -1117 -1117 -1117 167 -279 -1117 227 -279 -1117 -1117 -1117 167 -279 -1117 -1117 173 -1117 -1117 181 -1117 -21 -219 -1117 167 -1117 -219 39 -1117 121 -219 -1117 160 -1117 -119 -1117 173 -1117 -1117 -219 129 -1117 13 61 -279 111 -1117 -1117 -1117 173 -1117 -1117 167 -1117 -219 -1117 1 -1117 181 181 -79 -279 -119 213 -279 -279 -219 -119 -179 -179 189 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 23 E= 1.3e-054 0.043478 0.391304 0.000000 0.565217 0.043478 0.217391 0.739130 0.000000 0.347826 0.391304 0.000000 0.260870 0.173913 0.000000 0.826087 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.956522 0.043478 0.000000 0.956522 0.043478 0.000000 0.000000 0.000000 0.956522 0.043478 0.000000 0.000000 1.000000 0.000000 0.000000 0.695652 0.000000 0.260870 0.043478 0.000000 0.956522 0.000000 0.043478 0.260870 0.000000 0.695652 0.043478 0.000000 0.913043 0.000000 0.086957 0.000000 1.000000 0.000000 0.000000 0.043478 0.739130 0.000000 0.217391 0.304348 0.043478 0.652174 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.956522 0.000000 0.043478 0.000000 0.304348 0.000000 0.695652 0.695652 0.173913 0.043478 0.086957 0.869565 0.043478 0.043478 0.043478 0.086957 0.086957 0.086957 0.739130 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGHGCCACCACGCCCGGCTAAT MEME-7 regular expression -------------------------------------------------------------------------------- [TC][GC][CAT]GCCACC[AG]C[GA]CC[CT][GA]GC[TC]AAT -------------------------------------------------------------------------------- Time 4675.28 secs. ******************************************************************************** ******************************************************************************** MOTIF CATCAYCAYCAHCATCACCATC MEME-8 width = 22 sites = 21 llr = 385 E-value = 6.4e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 Description -------------------------------------------------------------------------------- Simplified A :a::a::81:83:9::8119:1 pos.-specific C 9:3a:6a157148128:88:28 probability G :::::1:::::::::2::::21 matrix T 1:7::3:133132:8:21:16: bits 2.3 2.1 * * 1.9 * * 1.6 * ** * * * * Relative 1.4 **** ** * * * Entropy 1.2 ***** ** * *** * * (26.5 bits) 0.9 ***** ** ** ***** * 0.7 *********** ********** 0.5 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel CATCACCACCACCATCACCATC consensus C T TT A GT C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr22:44479663-44480163 + 9 2.08e-13 AGGAGTGt catcaccaccatcatcaccatc accatcatca chr16:85823426-85823926 + 48 2.08e-13 tcaccatcat catcaccatcaacatcaccatc accatcacca chr5:176591620-176592120 - 54 3.45e-13 ACACCAACAC CATCATCACCACCATCACCATC ACAACCATCA chr12:124092474-12409297 - 65 3.45e-13 ACCATCATCA CATCATCACCATCATCACCATC ACCATCATCA chr4:1467850-1468350 - 25 3.63e-12 TCAGCAGCAG CATCACCATTACTATCACCATC ATCCCTACCA chr12:108982745-10898324 + 61 1.37e-11 tcattgtcac catcatcattatcaccaccatc atcatatcat chr17:81253563-81254063 + 73 2.23e-11 ccatcaccgc tatcatcaccaccatctccatc cctacc chr16:86951388-86951888 + 55 2.58e-11 tcttgaccgt catcatcaccactatcatcatc actatcaaca chr12:119480555-11948105 + 61 5.04e-11 ccatcatcct caccaccatcatcaccaccatc atcctcacca chr12:130584385-13058488 + 10 1.36e-10 CCACCATTA CATCACCACTATCATGACCATT ACATCATCAT chr19:5720466-5720966 - 71 1.26e-09 ACAGCCGC CACCAGCATCAACATCAGCATC GACTTGGGCT chr13:44191833-44192333 - 78 7.89e-09 A CATCATCATCAACAACAAAATG CACTCTGTCT chr17:74514064-74514564 - 60 9.96e-09 GATCACATGA CATCACCTATCACATGACCACC CCCACATGAC chr12:130764512-13076501 - 66 1.08e-08 ATCCACACTG CATCACCAACACCATGACATCA GCACCATGAC chr6:85642864-85643364 + 29 1.25e-08 cttctccccc taccaccaccaccaccACTAGC CTCTGTCCGC chr17:74514279-74514779 - 5 4.63e-08 CATCACATGA CATCACCCATCACATGATCACC TGTC chr1:55378433-55378933 + 24 1.12e-07 TCTGCAGTTT TACCAGCATCTACCTCTCCAGC TCCTTCCAGG chr22:29120048-29120548 - 61 1.19e-07 TCCCTGTTTC CATCATCACCTCTCCCTCCTCC CTGTTTCCAT chr1:3992036-3992536 - 10 1.47e-07 CTCTCCATGA CATCACCTCTCCCATGACATCA TCTCCCCTT chr2:192195055-192195555 - 55 2.45e-07 CCTCTGACAC CTCCGCCCCCACCATCTCCAGC TCGGAGAGAC chr19:5790827-5791327 + 69 3.74e-07 CCCGAGTCGC CACCACCACCATTCTCTAGAGG AGCCTCCGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:44479663-44480163 2.1e-13 8_[+8]_70 chr16:85823426-85823926 2.1e-13 47_[+8]_31 chr5:176591620-176592120 3.5e-13 53_[-8]_25 chr12:124092474-12409297 3.5e-13 64_[-8]_14 chr4:1467850-1468350 3.6e-12 24_[-8]_54 chr12:108982745-10898324 1.4e-11 60_[+8]_18 chr17:81253563-81254063 2.2e-11 72_[+8]_6 chr16:86951388-86951888 2.6e-11 54_[+8]_24 chr12:119480555-11948105 5e-11 60_[+8]_18 chr12:130584385-13058488 1.4e-10 9_[+8]_69 chr19:5720466-5720966 1.3e-09 70_[-8]_8 chr13:44191833-44192333 7.9e-09 77_[-8]_1 chr17:74514064-74514564 1e-08 59_[-8]_19 chr12:130764512-13076501 1.1e-08 65_[-8]_13 chr6:85642864-85643364 1.3e-08 28_[+8]_50 chr17:74514279-74514779 4.6e-08 4_[-8]_74 chr1:55378433-55378933 1.1e-07 23_[+8]_55 chr22:29120048-29120548 1.2e-07 60_[-8]_18 chr1:3992036-3992536 1.5e-07 9_[-8]_69 chr2:192195055-192195555 2.5e-07 54_[-8]_24 chr19:5790827-5791327 3.7e-07 68_[+8]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CATCAYCAYCAHCATCACCATC width=22 seqs=21 chr22:44479663-44480163 ( 9) CATCACCACCATCATCACCATC 1 chr16:85823426-85823926 ( 48) CATCACCATCAACATCACCATC 1 chr5:176591620-176592120 ( 54) CATCATCACCACCATCACCATC 1 chr12:124092474-12409297 ( 65) CATCATCACCATCATCACCATC 1 chr4:1467850-1468350 ( 25) CATCACCATTACTATCACCATC 1 chr12:108982745-10898324 ( 61) CATCATCATTATCACCACCATC 1 chr17:81253563-81254063 ( 73) TATCATCACCACCATCTCCATC 1 chr16:86951388-86951888 ( 55) CATCATCACCACTATCATCATC 1 chr12:119480555-11948105 ( 61) CACCACCATCATCACCACCATC 1 chr12:130584385-13058488 ( 10) CATCACCACTATCATGACCATT 1 chr19:5720466-5720966 ( 71) CACCAGCATCAACATCAGCATC 1 chr13:44191833-44192333 ( 78) CATCATCATCAACAACAAAATG 1 chr17:74514064-74514564 ( 60) CATCACCTATCACATGACCACC 1 chr12:130764512-13076501 ( 66) CATCACCAACACCATGACATCA 1 chr6:85642864-85643364 ( 29) TACCACCACCACCACCACTAGC 1 chr17:74514279-74514779 ( 5) CATCACCCATCACATGATCACC 1 chr1:55378433-55378933 ( 24) TACCAGCATCTACCTCTCCAGC 1 chr22:29120048-29120548 ( 61) CATCATCACCTCTCCCTCCTCC 1 chr1:3992036-3992536 ( 10) CATCACCTCTCCCATGACATCA 1 chr2:192195055-192195555 ( 55) CTCCGCCCCCACCATCTCCAGC 1 chr19:5790827-5791327 ( 69) CACCACCACCATTCTCTAGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 11.4446 E= 6.4e-038 -1104 151 -1104 -48 226 -1104 -1104 -206 -1104 -8 -1104 185 -1104 173 -1104 -1104 226 -1104 -266 -1104 -1104 92 -166 75 -1104 173 -1104 -1104 203 -166 -1104 -106 -48 80 -1104 75 -1104 124 -1104 52 194 -108 -1104 -106 52 51 -1104 52 -1104 143 -1104 -6 211 -108 -1104 -1104 -206 -66 -1104 194 -1104 134 -34 -1104 194 -1104 -1104 26 -106 134 -266 -106 -48 134 -266 -206 211 -1104 -1104 -48 -1104 -34 -66 152 -106 134 -166 -206 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 21 E= 6.4e-038 0.000000 0.857143 0.000000 0.142857 0.952381 0.000000 0.000000 0.047619 0.000000 0.285714 0.000000 0.714286 0.000000 1.000000 0.000000 0.000000 0.952381 0.000000 0.047619 0.000000 0.000000 0.571429 0.095238 0.333333 0.000000 1.000000 0.000000 0.000000 0.809524 0.095238 0.000000 0.095238 0.142857 0.523810 0.000000 0.333333 0.000000 0.714286 0.000000 0.285714 0.761905 0.142857 0.000000 0.095238 0.285714 0.428571 0.000000 0.285714 0.000000 0.809524 0.000000 0.190476 0.857143 0.142857 0.000000 0.000000 0.047619 0.190476 0.000000 0.761905 0.000000 0.761905 0.238095 0.000000 0.761905 0.000000 0.000000 0.238095 0.095238 0.761905 0.047619 0.095238 0.142857 0.761905 0.047619 0.047619 0.857143 0.000000 0.000000 0.142857 0.000000 0.238095 0.190476 0.571429 0.095238 0.761905 0.095238 0.047619 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCAYCAYCAHCATCACCATC MEME-8 regular expression -------------------------------------------------------------------------------- CA[TC]CA[CT]CA[CT][CT]A[CAT]CAT[CG][AT]CCA[TC]C -------------------------------------------------------------------------------- Time 5273.77 secs. ******************************************************************************** ******************************************************************************** MOTIF CACACACHACACACAC MEME-9 width = 16 sites = 43 llr = 535 E-value = 1.7e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 Description -------------------------------------------------------------------------------- Simplified A :827:a:36:919:82 pos.-specific C a1718:733818:a:7 probability G :::1:::11:::1::: matrix T :::12:2311:1::22 bits 2.3 2.1 * 1.9 * 1.6 * * ** Relative 1.4 ** * * ** Entropy 1.2 ** * * *** (17.9 bits) 0.9 ** *** ****** 0.7 ******* ******** 0.5 ******* ******** 0.2 **************** 0.0 ---------------- Multilevel CACACACAACACACAC consensus TTC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr12:122094905-12209540 - 80 5.82e-10 CACAC CACACACCACACACAC CACCACACCG chr5:6447839-6448339 + 55 5.82e-10 acactactca cacacaccacacacac accacacaca chr12:132156858-13215735 + 50 8.01e-10 acacacacta cacacattacacacac tacacactcc chr19:6717434-6717934 - 3 1.02e-09 ATAACCACAC CACACACAACACACAA CC chr22:50628636-50629136 - 49 1.24e-09 ATACGTGCCT CAAACACTACACACAC CTCAACCACC chr1:235078129-235078629 - 85 1.68e-09 . CACATACAACACACAC AACACACATA chr21:6565347-6565847 + 14 2.18e-09 ctccacactc cacacactccacacac accacacact chr22:45979332-45979832 + 4 4.29e-09 cac cacacacaacacactc cactcaaaaa chr22:45979940-45980440 + 2 4.29e-09 a cacacaccacacacat cacaaacaca chr4:141133259-141133759 - 31 9.82e-09 TCCTTGCACG CACACATTATACACAC ACACACACAC chr16:30045348-30045848 - 21 3.30e-08 ACTCACCACA CACATACCACATACAC CACACACACA chr10:46525839-46526339 + 79 4.39e-08 acacacacta cacacaccctacacac aaatcc chr1:228782509-228783009 - 43 6.42e-08 ACATGCCGCA CACACATCACAAACAA CACACACACA chr22:49975425-49975925 - 13 9.00e-08 ACATGATATA TACACACCACACACAC CACTAAACAC chr1:240562781-240563281 - 67 2.45e-07 CACACATACA CACTCACTATACACAT ACACACATAC chr8:38528059-38528559 + 3 2.76e-07 CA CAATCATTACACACAT GGAATGACTC chr19:33506188-33506688 + 85 3.09e-07 caccccatca caaacaccctacacaa chr1:29237080-29237580 - 48 4.60e-07 CCCCCGGCAG CACACACCACATACCC TAGACACTCC chr18:63091716-63092216 - 85 5.60e-07 . CACACACTACATACCA CACCACACTC chr1:236101323-236101823 - 85 1.10e-06 . CCCACATAACACTCAC CCACATACAC chr5:3323703-3324203 - 26 1.10e-06 CATCACACAC CACAGATACCACACAA CTCATACCAC chr22:24244142-24244642 + 24 1.10e-06 ttcacacaca cccacactccccacac tcacactcac chr19:36572857-36573357 + 8 1.21e-06 CAAACAG CACCCACGGCACACAC TAGGGTCTCC chr1:202205454-202205954 + 51 1.21e-06 catacacaca cacccctaacacacac accttcttca chr22:45291306-45291806 - 27 1.32e-06 CTGCCACACT CTAACACACCACACAA CACACATTCC chr7:66920782-66921282 + 83 1.45e-06 aaacgtccat cacgcactccacgcac gt chr9:136307196-136307696 + 3 1.60e-06 ca cacacactgcatgcac cacacacaac chr4:189233709-189234209 - 35 1.75e-06 AGCACTACTA CAACTACACCAAACAC CACCACAGAG chr4:189234918-189235418 - 50 1.75e-06 AGCACAAATG CAACTACACCAAACAC CACCACAGAG chr4:24472673-24473173 - 65 2.08e-06 CTCGCGCGCG CGCACACACAACACAC ACACACACAC chr19:31464721-31465221 - 53 2.92e-06 ACATACACAC AAACCACTACACACAT ACACACAAAC chr22:39563942-39564442 - 9 3.78e-06 CAGACATATG CACATAACACAAACTC ACACAGAC chr17:1293401-1293901 - 5 5.20e-06 GCGACATCAT CAAACACAACCCACGA CATC chr19:33458234-33458734 - 2 6.09e-06 ATACACACAC CACACATATACCACAT A chr1:7704909-7705409 - 35 7.17e-06 CCGCCGGATC CCCACACTTCCCACTC GCGCCAGAAA chr2:241620253-241620753 - 50 8.35e-06 ACTCACCCCT CACTCACTCCTCACTC ACCCCTCACT chr12:132951527-13295202 + 64 8.98e-06 cattgataca catgtacatcacacat cacacacata chr6:36680334-36680834 + 39 1.12e-05 AGGCTCTGCC CACGCACCTCCCACTC CGCGCGTGAT chr13:75480681-75481181 + 19 1.21e-05 cacacacaca cacacacGGCAAGCAA GCCATCTCCG chr19:37779091-37779591 + 21 1.30e-05 CCCCATCTGA CATATACAACATTCTC TCACGTGCGC chr1:223142715-223143215 + 42 1.40e-05 GCACAGGGCA CCCACATGACACGCTC ACCCCGTCCC chr1:236085585-236086085 - 84 1.51e-05 A CACACCGTATACACAT TCATGCAGCA chr16:3157453-3157953 - 13 2.63e-05 CGAGGGTCGG CGGATATGACACACAC CCGCGAAGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:122094905-12209540 5.8e-10 79_[-9]_5 chr5:6447839-6448339 5.8e-10 54_[+9]_30 chr12:132156858-13215735 8e-10 49_[+9]_35 chr19:6717434-6717934 1e-09 2_[-9]_82 chr22:50628636-50629136 1.2e-09 48_[-9]_36 chr1:235078129-235078629 1.7e-09 84_[-9] chr21:6565347-6565847 2.2e-09 13_[+9]_71 chr22:45979332-45979832 4.3e-09 3_[+9]_81 chr22:45979940-45980440 4.3e-09 1_[+9]_83 chr4:141133259-141133759 9.8e-09 30_[-9]_54 chr16:30045348-30045848 3.3e-08 20_[-9]_64 chr10:46525839-46526339 4.4e-08 78_[+9]_6 chr1:228782509-228783009 6.4e-08 42_[-9]_42 chr22:49975425-49975925 9e-08 12_[-9]_72 chr1:240562781-240563281 2.5e-07 66_[-9]_18 chr8:38528059-38528559 2.8e-07 2_[+9]_82 chr19:33506188-33506688 3.1e-07 84_[+9] chr1:29237080-29237580 4.6e-07 47_[-9]_37 chr18:63091716-63092216 5.6e-07 84_[-9] chr1:236101323-236101823 1.1e-06 84_[-9] chr5:3323703-3324203 1.1e-06 25_[-9]_59 chr22:24244142-24244642 1.1e-06 23_[+9]_61 chr19:36572857-36573357 1.2e-06 7_[+9]_77 chr1:202205454-202205954 1.2e-06 50_[+9]_34 chr22:45291306-45291806 1.3e-06 26_[-9]_58 chr7:66920782-66921282 1.5e-06 82_[+9]_2 chr9:136307196-136307696 1.6e-06 2_[+9]_82 chr4:189233709-189234209 1.7e-06 34_[-9]_50 chr4:189234918-189235418 1.7e-06 49_[-9]_35 chr4:24472673-24473173 2.1e-06 64_[-9]_20 chr19:31464721-31465221 2.9e-06 52_[-9]_32 chr22:39563942-39564442 3.8e-06 8_[-9]_76 chr17:1293401-1293901 5.2e-06 4_[-9]_80 chr19:33458234-33458734 6.1e-06 1_[-9]_83 chr1:7704909-7705409 7.2e-06 34_[-9]_50 chr2:241620253-241620753 8.3e-06 49_[-9]_35 chr12:132951527-13295202 9e-06 63_[+9]_21 chr6:36680334-36680834 1.1e-05 38_[+9]_46 chr13:75480681-75481181 1.2e-05 18_[+9]_66 chr19:37779091-37779591 1.3e-05 20_[+9]_64 chr1:223142715-223143215 1.4e-05 41_[+9]_43 chr1:236085585-236086085 1.5e-05 83_[-9]_1 chr16:3157453-3157953 2.6e-05 12_[-9]_72 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACACACHACACACAC width=16 seqs=43 chr12:122094905-12209540 ( 80) CACACACCACACACAC 1 chr5:6447839-6448339 ( 55) CACACACCACACACAC 1 chr12:132156858-13215735 ( 50) CACACATTACACACAC 1 chr19:6717434-6717934 ( 3) CACACACAACACACAA 1 chr22:50628636-50629136 ( 49) CAAACACTACACACAC 1 chr1:235078129-235078629 ( 85) CACATACAACACACAC 1 chr21:6565347-6565847 ( 14) CACACACTCCACACAC 1 chr22:45979332-45979832 ( 4) CACACACAACACACTC 1 chr22:45979940-45980440 ( 2) CACACACCACACACAT 1 chr4:141133259-141133759 ( 31) CACACATTATACACAC 1 chr16:30045348-30045848 ( 21) CACATACCACATACAC 1 chr10:46525839-46526339 ( 79) CACACACCCTACACAC 1 chr1:228782509-228783009 ( 43) CACACATCACAAACAA 1 chr22:49975425-49975925 ( 13) TACACACCACACACAC 1 chr1:240562781-240563281 ( 67) CACTCACTATACACAT 1 chr8:38528059-38528559 ( 3) CAATCATTACACACAT 1 chr19:33506188-33506688 ( 85) CAAACACCCTACACAA 1 chr1:29237080-29237580 ( 48) CACACACCACATACCC 1 chr18:63091716-63092216 ( 85) CACACACTACATACCA 1 chr1:236101323-236101823 ( 85) CCCACATAACACTCAC 1 chr5:3323703-3324203 ( 26) CACAGATACCACACAA 1 chr22:24244142-24244642 ( 24) CCCACACTCCCCACAC 1 chr19:36572857-36573357 ( 8) CACCCACGGCACACAC 1 chr1:202205454-202205954 ( 51) CACCCCTAACACACAC 1 chr22:45291306-45291806 ( 27) CTAACACACCACACAA 1 chr7:66920782-66921282 ( 83) CACGCACTCCACGCAC 1 chr9:136307196-136307696 ( 3) CACACACTGCATGCAC 1 chr4:189233709-189234209 ( 35) CAACTACACCAAACAC 1 chr4:189234918-189235418 ( 50) CAACTACACCAAACAC 1 chr4:24472673-24473173 ( 65) CGCACACACAACACAC 1 chr19:31464721-31465221 ( 53) AAACCACTACACACAT 1 chr22:39563942-39564442 ( 9) CACATAACACAAACTC 1 chr17:1293401-1293901 ( 5) CAAACACAACCCACGA 1 chr19:33458234-33458734 ( 2) CACACATATACCACAT 1 chr1:7704909-7705409 ( 35) CCCACACTTCCCACTC 1 chr2:241620253-241620753 ( 50) CACTCACTCCTCACTC 1 chr12:132951527-13295202 ( 64) CATGTACATCACACAT 1 chr6:36680334-36680834 ( 39) CACGCACCTCCCACTC 1 chr13:75480681-75481181 ( 19) CACACACGGCAAGCAA 1 chr19:37779091-37779591 ( 21) CATATACAACATTCTC 1 chr1:223142715-223143215 ( 42) CCCACATGACACGCTC 1 chr1:236085585-236086085 ( 84) CACACCGTATACACAT 1 chr16:3157453-3157953 ( 13) CGGATATGACACACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 9.73444 E= 1.7e-031 -309 166 -1207 -309 207 -169 -269 -309 -9 130 -369 -209 190 -137 -211 -151 -1207 139 -369 -9 226 -269 -1207 -1207 -309 126 -369 23 71 -24 -169 71 155 -24 -211 -109 -209 147 -1207 -77 211 -137 -1207 -309 -77 135 -1207 -77 211 -1207 -169 -209 -1207 173 -1207 -1207 195 -269 -369 -29 -9 111 -1207 -29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 43 E= 1.7e-031 0.023256 0.953488 0.000000 0.023256 0.837209 0.093023 0.046512 0.023256 0.186047 0.744186 0.023256 0.046512 0.744186 0.116279 0.069767 0.069767 0.000000 0.790698 0.023256 0.186047 0.953488 0.046512 0.000000 0.000000 0.023256 0.720930 0.023256 0.232558 0.325581 0.255814 0.093023 0.325581 0.581395 0.255814 0.069767 0.093023 0.046512 0.837209 0.000000 0.116279 0.860465 0.116279 0.000000 0.023256 0.116279 0.767442 0.000000 0.116279 0.860465 0.000000 0.093023 0.046512 0.000000 1.000000 0.000000 0.000000 0.767442 0.046512 0.023256 0.162791 0.186047 0.651163 0.000000 0.162791 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACHACACACAC MEME-9 regular expression -------------------------------------------------------------------------------- CACACA[CT][ATC][AC]CACACAC -------------------------------------------------------------------------------- Time 5842.34 secs. ******************************************************************************** ******************************************************************************** MOTIF AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 width = 31 sites = 14 llr = 330 E-value = 6.7e-029 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 Description -------------------------------------------------------------------------------- Simplified A 91462a9::21::189::1:::8211:25:: pos.-specific C :::11::14:82:1::666::1::26:1::3 probability G :9617:1:58:1:721341aa8186296486 matrix T 1111:::91:16a1:11:1::11::111121 bits 2.3 * * 2.1 * * 1.9 * *** * 1.6 * *** * * ** Relative 1.4 * *** * ** ** * * Entropy 1.2 ** *** * * ** ** ** * * (34.0 bits) 0.9 ** *** **** ** ***** * * 0.7 ******** **** ** * ***** * ** 0.5 ************************* * *** 0.2 ******************************* 0.0 ------------------------------- Multilevel AGGAGAATGGCTTGAACCCGGGAGGCGGAGG consensus A A CA C G GG ACG AGTC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr19:49817586-49818086 + 44 3.12e-17 aggctgaggc aggagaatcgcttgaacccgggaagcggagg ttgtagtgag chr1:146038240-146038740 - 29 4.85e-17 AGGCTGAGGC AGGAGAATTGCTTGAACCCGGGAGGCGGGGG TTGCAGTGAG chr12:55829108-55829608 + 43 4.85e-17 aggctgaggc agaagaatcgcttgaacccgggaggtggagg ttgcagtgaa chr14:103075879-10307637 + 62 4.85e-17 aggctgaggc aggagaatcgcttgaacctgggaggcggagg ttgcagtg chr19:49495487-49495987 - 28 1.82e-16 AGGCTGAGGC AGGAGAATCGCTTGAACCTGGGAGGCGAAGG TTGCAGTGAG chr6:31197093-31197593 - 11 3.19e-16 AGGCTGAGGC AGAAAAATGGCTTGAACGCGGGAGGCGGAGC TTGCAGGGAG chr6:107027794-107028294 + 43 3.21e-12 aggctgaggc aggagaatggcgtgaacccgggagAATGGTG TGCCCCGAGC chr17:45147639-45148139 - 53 2.66e-10 TCTTAAGATT ATAGAAATGGCTTCAAGGCGGGTGGTGAGTG CCTGAGACTG chr19:3987839-3988339 - 55 4.17e-10 AGGCTGAGGC AGGTGAATCGCTTGAATCGGGTGGCGGAGGC TGCAGTGAGC chr22:37844448-37844948 - 3 6.82e-10 AGGCTGAGGC AGGAGAATTGCTTCAAGGAGGCGGAGGTTGC AG chr19:46600783-46601283 + 58 1.60e-09 CCCTCCGCCG AAGAAAGTGAAGTGGGCCCGGGAGGCGGGGC GCGCGGCGAG chr15:69452817-69453317 - 62 1.88e-09 AAGTGCTC AGTCGAACGGCCTGGAGCCGGGAACCGCATG GAGAGCCGAA chr10:25934536-25935036 + 54 3.66e-09 GGAGGGAACG TGAGGAATGAACTTGAGGAgggaacgggagg ggtgaacgtg chr19:55216232-55216732 - 21 6.19e-09 ACCTGCAATG AGATCAATGATCTAATCGCGGCAGGCGTGGT GGCTCATGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:49817586-49818086 3.1e-17 43_[+10]_26 chr1:146038240-146038740 4.8e-17 28_[-10]_41 chr12:55829108-55829608 4.8e-17 42_[+10]_27 chr14:103075879-10307637 4.8e-17 61_[+10]_8 chr19:49495487-49495987 1.8e-16 27_[-10]_42 chr6:31197093-31197593 3.2e-16 10_[-10]_59 chr6:107027794-107028294 3.2e-12 42_[+10]_27 chr17:45147639-45148139 2.7e-10 52_[-10]_17 chr19:3987839-3988339 4.2e-10 54_[-10]_15 chr22:37844448-37844948 6.8e-10 2_[-10]_67 chr19:46600783-46601283 1.6e-09 57_[+10]_12 chr15:69452817-69453317 1.9e-09 61_[-10]_8 chr10:25934536-25935036 3.7e-09 53_[+10]_16 chr19:55216232-55216732 6.2e-09 20_[-10]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGRAGAATSGCTTGAACSCGGGAGGCGGRGG width=31 seqs=14 chr19:49817586-49818086 ( 44) AGGAGAATCGCTTGAACCCGGGAAGCGGAGG 1 chr1:146038240-146038740 ( 29) AGGAGAATTGCTTGAACCCGGGAGGCGGGGG 1 chr12:55829108-55829608 ( 43) AGAAGAATCGCTTGAACCCGGGAGGTGGAGG 1 chr14:103075879-10307637 ( 62) AGGAGAATCGCTTGAACCTGGGAGGCGGAGG 1 chr19:49495487-49495987 ( 28) AGGAGAATCGCTTGAACCTGGGAGGCGAAGG 1 chr6:31197093-31197593 ( 11) AGAAAAATGGCTTGAACGCGGGAGGCGGAGC 1 chr6:107027794-107028294 ( 43) AGGAGAATGGCGTGAACCCGGGAGAATGGTG 1 chr17:45147639-45148139 ( 53) ATAGAAATGGCTTCAAGGCGGGTGGTGAGTG 1 chr19:3987839-3988339 ( 55) AGGTGAATCGCTTGAATCGGGTGGCGGAGGC 1 chr22:37844448-37844948 ( 3) AGGAGAATTGCTTCAAGGAGGCGGAGGTTGC 1 chr19:46600783-46601283 ( 58) AAGAAAGTGAAGTGGGCCCGGGAGGCGGGGC 1 chr15:69452817-69453317 ( 62) AGTCGAACGGCCTGGAGCCGGGAACCGCATG 1 chr10:25934536-25935036 ( 54) TGAGGAATGAACTTGAGGAGGGAACGGGAGG 1 chr19:55216232-55216732 ( 21) AGATCAATGATCTAATCGCGGCAGGCGTGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.3941 E= 6.7e-029 222 -1045 -1045 -147 -147 -1045 151 -147 85 -1045 92 -147 169 -207 -108 -48 11 -207 124 -1045 233 -1045 -1045 -1045 222 -1045 -207 -1045 -1045 -207 -1045 222 -1045 25 73 -48 11 -1045 138 -1045 -48 138 -1045 -147 -1045 -49 -108 169 -1045 -1045 -1045 233 -147 -108 124 -147 198 -1045 -49 -1045 211 -1045 -207 -147 -1045 109 -8 -147 -1045 109 25 -1045 -48 109 -207 -48 -1045 -1045 173 -1045 -1045 -1045 173 -1045 -1045 -108 138 -147 198 -1045 -108 -147 11 -1045 138 -1045 -48 -49 109 -1045 -147 92 -49 -48 -1045 -1045 162 -147 11 -207 92 -48 133 -1045 51 -147 -1045 -1045 138 11 -1045 -8 109 -147 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 14 E= 6.7e-029 0.928571 0.000000 0.000000 0.071429 0.071429 0.000000 0.857143 0.071429 0.357143 0.000000 0.571429 0.071429 0.642857 0.071429 0.142857 0.142857 0.214286 0.071429 0.714286 0.000000 1.000000 0.000000 0.000000 0.000000 0.928571 0.000000 0.071429 0.000000 0.000000 0.071429 0.000000 0.928571 0.000000 0.357143 0.500000 0.142857 0.214286 0.000000 0.785714 0.000000 0.142857 0.785714 0.000000 0.071429 0.000000 0.214286 0.142857 0.642857 0.000000 0.000000 0.000000 1.000000 0.071429 0.142857 0.714286 0.071429 0.785714 0.000000 0.214286 0.000000 0.857143 0.000000 0.071429 0.071429 0.000000 0.642857 0.285714 0.071429 0.000000 0.642857 0.357143 0.000000 0.142857 0.642857 0.071429 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.142857 0.785714 0.071429 0.785714 0.000000 0.142857 0.071429 0.214286 0.000000 0.785714 0.000000 0.142857 0.214286 0.642857 0.000000 0.071429 0.571429 0.214286 0.142857 0.000000 0.000000 0.928571 0.071429 0.214286 0.071429 0.571429 0.142857 0.500000 0.000000 0.428571 0.071429 0.000000 0.000000 0.785714 0.214286 0.000000 0.285714 0.642857 0.071429 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRAGAATSGCTTGAACSCGGGAGGCGGRGG MEME-10 regular expression -------------------------------------------------------------------------------- AG[GA]A[GA]AAT[GC][GA]C[TC]TG[AG]A[CG][CG]CGGGA[GA][GC][CG]G[GA][AG][GT][GC] -------------------------------------------------------------------------------- Time 6370.30 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:23917017-23917517 8.42e-01 100 chr6:149963666-149964166 5.75e-01 100 chr19:35392891-35393391 4.11e-07 1_[-5(1.95e-05)]_5_[+1(1.71e-08)]_\ 14_[-2(1.96e-07)]_4_[+1(1.33e-07)]_12 chr1:19974679-19975179 2.00e-01 100 chr1:223142715-223143215 5.35e-04 41_[+9(1.40e-05)]_43 chr19:55216232-55216732 1.91e-04 20_[-10(6.19e-09)]_49 chr19:41230377-41230877 2.37e-09 6_[-2(5.56e-09)]_4_[+1(1.01e-08)]_6_\ [-2(1.92e-09)]_7_[+1(2.16e-06)]_5 chr1:55378433-55378933 1.01e-03 23_[+8(1.12e-07)]_30_[-6(8.08e-05)]_\ 3 chr20:63894798-63895298 9.36e-01 100 chr9:128322291-128322791 1.72e-01 100 chr1:26279480-26279980 7.29e-01 100 chr17:68205246-68205746 2.27e-01 34_[+6(1.76e-05)]_44 chr22:30246130-30246630 7.92e-04 2_[+6(3.11e-05)]_45_[+6(1.21e-07)]_\ 9 chr17:17206279-17206779 1.47e-01 100 chr17:82698959-82699459 9.82e-01 100 chr19:5308852-5309352 2.69e-03 7_[-9(5.34e-05)]_55_[+6(5.30e-05)] chr19:34134452-34134952 4.93e-02 12_[-6(1.18e-05)]_66 chr21:43775929-43776429 6.08e-01 100 chr12:123601879-12360237 7.64e-01 100 chr17:82065658-82066158 3.00e-01 100 chr19:15418553-15419053 2.82e-01 100 chr5:181173549-181174049 1.17e-01 37_[+8(6.84e-05)]_41 chr20:63177152-63177652 4.29e-01 100 chr10:46525839-46526339 1.22e-14 10_[+2(6.44e-07)]_9_[+9(2.69e-06)]_\ 14_[+9(3.31e-10)]_15 chr19:34677660-34678160 8.74e-01 100 chr5:112420096-112420596 4.13e-01 100 chr1:183635603-183636103 8.14e-02 27_[-6(9.63e-06)]_51 chr19:48619125-48619625 3.09e-01 100 chr5:43192531-43193031 1.64e-02 41_[+1(4.00e-06)]_43 chr2:28894067-28894567 1.28e-09 24_[-5(2.66e-05)]_13_[-4(1.11e-14)]_\ 20 chr16:3157453-3157953 5.12e-02 12_[-9(2.63e-05)]_72 chr19:39502399-39502899 1.14e-01 65_[-3(1.81e-05)]_5 chr1:186404352-186404852 3.49e-01 17_[-5(4.26e-05)]_71 chr19:2900237-2900737 5.60e-02 7_[-6(3.63e-06)]_71 chr19:51017177-51017677 2.78e-02 66_[+6(1.10e-06)]_12 chr19:247002-247502 7.17e-01 100 chr3:10942051-10942551 4.98e-01 27_[+8(8.91e-05)]_51 chr14:103075879-10307637 4.54e-29 5_[-7(8.51e-10)]_2_[+3(5.26e-17)]_2_\ [+10(4.85e-17)]_8 chr1:100037751-100038251 2.62e-01 100 chr16:30922130-30922630 4.17e-01 100 chr21:6565347-6565847 4.23e-07 13_[+9(2.18e-09)]_2_[+9(2.18e-09)]_\ 20_[+9(2.18e-09)]_2_[+5(1.62e-05)]_3 chr17:7234329-7234829 4.79e-02 100 chr15:69452817-69453317 2.71e-04 61_[-10(1.88e-09)]_8 chr12:49130955-49131455 5.43e-01 100 chr22:21001628-21002128 9.67e-01 100 chr1:59814075-59814575 2.43e-12 30_[-3(3.90e-16)]_2_[+7(4.58e-08)]_\ 16 chr17:42181179-42181679 3.64e-01 100 chr19:10006931-10007431 5.08e-02 30_[-6(4.39e-07)]_5_[-6(4.39e-07)]_\ 21 chr19:47112584-47113084 2.11e-03 7_[-6(1.76e-05)]_26_[-6(7.44e-05)]_\ 23 chr12:132951527-13295202 8.98e-15 7_[+5(5.37e-06)]_3_[+2(8.08e-06)]_4_\ [+2(2.40e-07)]_12_[+2(2.55e-09)]_2 chr19:39073279-39073779 3.47e-13 35_[-3(1.49e-16)]_2_[+7(3.70e-09)]_\ 11 chr19:40603609-40604109 2.36e-01 100 chr22:39563942-39564442 1.58e-11 [-2(7.78e-07)]_1_[-2(4.57e-06)]_4_\ [+1(4.78e-07)]_5_[-2(1.91e-08)]_14 chr16:88812029-88812529 2.57e-01 24_[-6(2.58e-05)]_54 chr19:35495268-35495768 9.85e-01 100 chr4:182143958-182144458 8.06e-19 23_[-6(1.24e-06)]_[+2(5.95e-13)]_35 chr7:102464744-102465244 8.94e-01 100 chr19:50649680-50650180 5.13e-03 100 chr3:52239123-52239623 1.11e-07 28_[+1(8.15e-07)]_15_[-2(6.30e-05)]_\ 21 chr16:2267750-2268250 8.34e-01 100 chr5:41925027-41925527 6.84e-01 100 chr5:76790532-76791032 6.75e-01 100 chr2:47176419-47176919 7.25e-02 21_[+3(4.19e-05)]_49 chr21:45590977-45591477 8.57e-07 77_[+2(2.72e-08)]_3 chr12:108982745-10898324 1.75e-10 [+4(1.61e-11)]_2_[+8(1.44e-05)]_5_\ [+8(1.37e-11)]_18 chr11:1418246-1418746 6.95e-01 100 chr7:141551124-141551624 8.37e-01 100 chr16:85823426-85823926 1.12e-14 2_[+4(2.38e-13)]_2_[+8(2.08e-13)]_2_\ [+8(2.08e-13)]_19 chr6:27312570-27313070 3.73e-02 49_[-6(3.11e-05)]_29 chr22:50628636-50629136 3.15e-14 17_[+1(1.29e-06)]_15_[-9(1.24e-09)]_\ 8_[-2(5.41e-08)]_8 chr16:527030-527530 7.20e-01 100 chr1:236085585-236086085 2.68e-10 13_[+1(2.41e-07)]_19_[-5(1.62e-05)]_\ 3_[-5(5.76e-07)]_8_[-9(1.51e-05)]_1 chr10:42782444-42782944 6.44e-02 100 chr5:173284358-173284858 2.03e-04 100 chr19:40348255-40348755 1.69e-01 100 chr19:35248232-35248732 9.74e-02 29_[+6(1.45e-05)]_49 chr1:92831957-92832457 9.91e-01 100 chr19:38403166-38403666 1.49e-02 78_[-7(7.69e-05)] chr19:33302795-33303295 8.03e-01 100 chr4:3746647-3747147 4.27e-15 4_[-2(7.69e-05)]_2_[-2(5.95e-13)]_\ 18_[-5(1.80e-05)]_24 chr5:41904225-41904725 2.82e-07 8_[-4(1.92e-05)]_5_[+6(2.52e-07)]_\ 34 chr15:40092197-40092697 2.42e-15 35_[-1(1.96e-08)]_6_[+2(5.95e-13)]_\ 23 chr1:52553220-52553720 4.83e-05 4_[-1(7.18e-06)]_[+6(6.31e-06)]_58 chr18:63091716-63092216 2.07e-16 12_[+1(9.61e-07)]_1_[-9(5.82e-10)]_\ 4_[+1(5.24e-07)]_1_[+1(4.48e-08)]_2_[-9(5.60e-07)] chr1:202205454-202205954 4.89e-14 10_[+2(2.15e-08)]_9_[-1(7.09e-08)]_\ 2_[+5(1.80e-05)]_6_[-1(1.46e-09)]_9 chr19:31464721-31465221 1.46e-13 4_[+1(1.20e-08)]_5_[-5(1.78e-07)]_7_\ [+1(1.20e-08)]_6_[+1(1.20e-08)]_5_[-5(1.78e-07)]_1 chr19:33521351-33521851 8.64e-01 100 chr5:150449911-150450411 6.20e-08 23_[+3(2.42e-14)]_47 chr9:128947572-128948072 2.39e-01 100 chr1:40257929-40258429 4.29e-01 100 chr22:49975425-49975925 1.36e-12 12_[-9(9.00e-08)]_6_[-9(9.82e-09)]_\ 4_[-2(3.96e-07)]_1_[-9(1.59e-08)]_9 chr2:219571730-219572230 1.78e-14 24_[+1(6.60e-10)]_[-2(1.69e-08)]_12_\ [-2(8.67e-12)]_8 chr22:41091656-41092156 5.45e-02 16_[+6(1.10e-06)]_13_[+6(9.51e-05)]_\ 27 chr19:40610107-40610607 2.07e-02 66_[-6(2.58e-05)]_12 chr3:14178249-14178749 6.78e-04 4_[-6(6.53e-08)]_74 chr15:83207965-83208465 4.88e-02 43_[+7(5.30e-05)]_35 chr6:159726724-159727224 1.23e-01 32_[+5(3.25e-05)]_56 chr9:129340475-129340975 1.09e-12 11_[-2(4.30e-08)]_3_[-2(8.12e-09)]_\ 14_[-2(2.21e-09)]_12 chr15:77420546-77421046 2.28e-02 78_[+6(7.44e-05)] chr1:109910485-109910985 4.13e-16 2_[+6(4.45e-05)]_12_[-5(5.37e-06)]_\ 3_[+1(1.66e-10)]_1_[-5(5.76e-07)]_20 chr8:13276279-13276779 9.89e-01 100 chr10:133010670-13301117 4.69e-14 12_[+1(3.55e-07)]_2_[-5(3.75e-06)]_\ 4_[+1(8.15e-07)]_5_[-5(7.17e-06)]_1_[-5(3.75e-06)]_8 chr19:37078406-37078906 4.50e-02 100 chr3:11846571-11847071 2.22e-01 100 chr19:39631147-39631647 5.96e-01 100 chr4:141133259-141133759 1.65e-20 14_[-2(5.95e-13)]_66 chr5:107672091-107672591 5.84e-03 100 chr16:4253925-4254425 6.17e-01 100 chr16:30957586-30958086 8.73e-01 100 chr17:30906066-30906566 9.99e-01 100 chr8:629639-630139 2.38e-03 17_[+5(1.09e-05)]_27_[+5(1.09e-05)]_\ 32 chr12:47705526-47706026 6.59e-01 100 chr6:57046225-57046725 1.52e-01 41_[-7(5.90e-05)]_37 chr2:85742459-85742959 1.19e-15 62_[+1(1.66e-10)]_[-2(5.95e-13)]_2 chr8:38528059-38528559 4.53e-04 2_[+9(2.76e-07)]_82 chr22:39529079-39529579 8.62e-03 11_[-5(3.25e-05)]_77 chr15:74546117-74546617 6.09e-05 67_[+1(4.00e-06)]_17 chr3:48300971-48301471 2.43e-01 100 chr2:230864456-230864956 5.18e-08 49_[+6(2.44e-08)]_4_[-2(1.40e-05)]_\ 5 chr16:30045348-30045848 9.86e-19 [-9(7.86e-09)]_4_[-9(3.30e-08)]_11_\ [+1(3.85e-10)]_3_[-2(1.81e-11)]_2_[-5(1.80e-05)] chr6:32130532-32131032 1.48e-26 6_[-7(2.73e-09)]_2_[+3(2.01e-16)]_7_\ [+4(5.32e-19)]_2 chr12:70242784-70243284 3.14e-10 7_[-1(3.45e-08)]_2_[-1(7.69e-06)]_\ 59 chr9:124855861-124856361 1.71e-01 45_[+7(4.76e-05)]_33 chr22:41446660-41447160 6.14e-01 100 chr8:28401274-28401774 9.95e-08 [-5(5.76e-07)]_2_[+1(1.33e-07)]_24_\ [+1(2.20e-07)]_10_[+1(8.15e-07)]_4 chr1:212608446-212608946 3.89e-01 100 chr20:62407288-62407788 8.57e-01 36_[-6(4.07e-05)]_42 chr19:999957-1000457 6.89e-01 100 chr16:3263287-3263787 2.26e-07 26_[+7(1.92e-12)]_1_[-5(1.27e-05)]_\ 39 chr19:58305267-58305767 1.21e-05 [-2(3.63e-05)]_37_[+6(7.81e-06)]_21 chr4:157204523-157205023 1.32e-01 65_[+6(1.94e-05)]_13 chr5:6447839-6448339 6.45e-15 13_[+9(2.18e-09)]_3_[-1(7.77e-08)]_\ 6_[+9(5.82e-10)]_2_[+5(7.67e-08)]_1_[+5(6.89e-05)]_3 chr10:87095395-87095895 5.89e-03 49_[+2(7.69e-05)]_31 chr9:109244382-109244882 5.63e-06 2_[+7(1.86e-10)]_76 chr16:86951388-86951888 1.31e-13 15_[+8(3.45e-13)]_17_[+8(2.58e-11)]_\ 2_[+8(1.01e-07)] chr21:34888002-34888502 1.76e-02 15_[+5(3.88e-05)]_73 chr19:19192074-19192574 2.07e-02 51_[+6(6.85e-05)]_27 chr19:49817586-49818086 1.00e-20 11_[+3(7.63e-18)]_2_[+10(3.12e-17)]_\ 26 chr17:75905090-75905590 2.23e-10 10_[-7(2.91e-08)]_2_[+3(4.27e-14)]_\ 36 chr3:51538366-51538866 3.34e-01 100 chr14:103520948-10352144 2.06e-01 49_[+6(3.40e-05)]_29 chr7:6448141-6448641 9.68e-16 35_[-5(8.64e-07)]_12_[-4(2.70e-18)]_\ 10 chr1:227734872-227735372 4.38e-01 100 chr1:26500412-26500912 9.95e-01 100 chr9:136307196-136307696 8.01e-12 2_[+9(1.60e-06)]_[+9(3.31e-10)]_4_\ [+9(2.76e-07)]_2_[+9(4.10e-06)]_7_[+9(1.62e-07)]_5 chr22:45979940-45980440 6.88e-14 1_[+9(4.29e-09)]_2_[+9(2.45e-07)]_\ 14_[+2(1.43e-07)]_10_[-1(1.23e-07)]_5 chr19:1503363-1503863 9.49e-01 100 chr3:194134801-194135301 1.34e-10 37_[+2(2.94e-10)]_2_[-1(8.15e-07)]_\ 25 chr16:66603874-66604374 9.11e-14 41_[-5(2.80e-07)]_13_[-2(1.64e-11)]_\ 14 chr19:42283336-42283836 3.72e-10 5_[+1(3.55e-07)]_3_[+1(3.22e-07)]_\ 60 chr6:11093634-11094134 3.56e-01 46_[+3(7.56e-05)]_24 chr2:45650858-45651358 1.55e-14 4_[+2(8.67e-12)]_1_[+5(1.09e-05)]_\ 49_[+5(9.54e-05)]_2 chr19:1021476-1021976 4.55e-01 100 chr19:461959-462459 1.40e-07 55_[-9(2.08e-06)]_13_[+1(3.91e-07)] chr16:21599251-21599751 8.52e-01 100 chr7:25856742-25857242 2.92e-18 25_[+8(7.81e-05)]_9_[-1(1.66e-10)]_\ [+2(5.95e-13)]_8 chr1:201955042-201955542 8.81e-02 42_[-3(9.31e-05)]_28 chr22:24244142-24244642 4.21e-13 4_[+2(2.21e-09)]_3_[+9(1.30e-05)]_8_\ [+2(4.05e-10)]_12_[-1(7.49e-07)]_1 chr2:231786195-231786695 3.28e-01 100 chr1:156660077-156660577 4.68e-02 100 chr1:36088648-36089148 7.26e-01 100 chr19:5790827-5791327 1.30e-04 68_[+8(3.74e-07)]_10 chr17:49192119-49192619 2.63e-01 100 chr10:25934536-25935036 5.25e-04 53_[+10(3.66e-09)]_16 chr19:47241401-47241901 4.71e-04 5_[+1(2.18e-05)]_41_[-2(2.99e-06)]_\ 18 chr19:58408664-58409164 2.87e-01 100 chr16:30065159-30065659 3.16e-02 78_[-6(1.94e-05)] chr8:16825854-16826354 4.93e-16 14_[+2(8.67e-12)]_[+2(1.84e-10)]_46 chr22:44332012-44332512 2.11e-03 [-6(7.81e-06)]_41_[-6(1.59e-06)]_15 chr4:1467850-1468350 2.78e-12 24_[-8(3.63e-12)]_8_[-8(2.08e-13)]_\ 2_[-8(2.23e-08)] chr6:26311522-26312022 9.57e-01 100 chr19:55259123-55259623 9.72e-01 100 chr12:84912607-84913107 4.02e-10 10_[+1(1.01e-08)]_74 chr1:232630500-232631000 1.71e-01 14_[+6(8.68e-06)]_64 chr16:4183423-4183923 9.81e-01 100 chr15:72117592-72118092 3.18e-01 100 chr12:48716916-48717416 7.80e-14 25_[-7(7.84e-10)]_2_[+3(7.92e-15)]_\ 21 chr19:43754472-43754972 1.91e-01 100 chr9:133160865-133161365 2.11e-01 100 chr12:132156858-13215735 4.03e-11 6_[+5(6.00e-05)]_22_[+9(1.68e-09)]_\ [+5(6.00e-05)]_[+2(8.08e-06)]_[+5(1.59e-06)] chr22:50244674-50245174 5.55e-01 100 chr15:74614637-74615137 8.01e-01 100 chr1:228782509-228783009 1.35e-12 9_[+1(9.61e-07)]_5_[-5(7.36e-07)]_\ [-9(6.42e-08)]_8_[-9(9.00e-08)]_[-9(6.09e-06)]_2 chr1:42335160-42335660 9.99e-01 100 chr1:225962202-225962702 7.22e-02 7_[+6(4.06e-06)]_71 chr19:35248848-35249348 5.14e-01 100 chr19:28793792-28794292 2.38e-01 100 chr1:21658972-21659472 6.29e-02 13_[+7(3.67e-06)]_65 chr12:122094905-12209540 1.38e-16 1_[-5(2.81e-06)]_2_[+1(9.21e-09)]_\ [-5(9.10e-06)]_10_[-9(2.60e-08)]_10_[-9(5.82e-10)]_5 chr15:89334878-89335378 9.87e-01 100 chr2:218710784-218711284 5.31e-01 100 chr19:434104-434604 5.55e-07 27_[-2(1.02e-05)]_16_[-2(9.47e-06)]_\ 17 chr17:82751690-82752190 7.29e-01 100 chr20:59031854-59032354 6.83e-01 100 chr16:1308129-1308629 8.26e-08 1_[+6(2.14e-05)]_10_[+6(6.53e-08)]_\ 14_[+6(2.61e-09)]_9 chr5:5340242-5340742 4.11e-05 35_[-6(6.29e-05)]_[-2(3.59e-07)]_23 chr19:58327056-58327556 8.26e-02 100 chr6:28790253-28790753 8.84e-22 34_[+5(8.64e-07)]_[-7(2.39e-12)]_2_\ [+3(7.63e-18)] chr5:139341647-139342147 8.99e-03 100 chr22:17121299-17121799 2.15e-02 7_[+6(6.85e-05)]_39_[+6(2.57e-06)]_\ 10 chr6:113971049-113971549 4.88e-01 100 chr7:100705372-100705872 9.94e-01 100 chrX:156008781-156009281 3.67e-12 9_[-2(2.16e-10)]_[+1(7.77e-08)]_10_\ [-2(4.05e-10)]_4_[-2(5.97e-10)]_1 chr6:139291842-139292342 5.59e-15 7_[+2(4.97e-12)]_18_[+2(5.95e-13)]_\ 35 chr17:74514279-74514779 8.16e-03 4_[-8(4.63e-08)]_27_[-8(1.61e-06)]_\ 25 chr19:33506188-33506688 3.40e-17 2_[-1(3.45e-08)]_4_[+9(2.46e-05)]_1_\ [-1(4.86e-09)]_8_[+9(4.81e-06)]_5_[+9(3.09e-07)] chr6:43181886-43182386 9.23e-01 100 chr20:63657982-63658482 1.62e-01 100 chr7:148921145-148921645 5.74e-14 3_[-1(1.66e-10)]_81 chr1:236685851-236686351 1.34e-01 100 chr1:28648581-28649081 2.94e-07 28_[-2(3.84e-08)]_52 chr19:37210818-37211318 9.98e-10 20_[+7(8.60e-11)]_3_[-5(8.64e-07)]_\ 43 chr12:2255724-2256224 4.20e-01 100 chr3:17742276-17742776 1.96e-04 61_[-6(7.89e-11)]_17 chr19:36528711-36529211 1.10e-09 9_[+1(5.01e-06)]_15_[-2(1.45e-09)]_\ 40 chr7:102572209-102572709 3.14e-03 40_[+4(4.16e-05)]_29 chr3:15860022-15860522 1.73e-03 100 chr12:49967394-49967894 1.46e-04 26_[-5(1.80e-05)]_46_[-1(8.24e-06)] chr19:37779091-37779591 3.52e-03 20_[+9(1.30e-05)]_64 chr6:35948625-35949125 2.30e-01 100 chr5:131634864-131635364 2.89e-01 7_[+2(9.36e-05)]_73 chr16:4476200-4476700 5.54e-01 100 chr19:10332926-10333426 2.23e-01 12_[-6(3.24e-06)]_66 chr1:21345612-21346112 7.15e-15 73_[-2(5.95e-13)]_7 chr19:40284973-40285473 4.76e-02 65_[-6(3.40e-05)]_13 chr17:7932003-7932503 1.07e-01 37_[+6(1.76e-05)]_41 chr6:131628033-131628533 5.02e-01 100 chr22:45290267-45290767 8.24e-15 7_[+1(3.85e-10)]_45_[+1(2.00e-07)]_\ [-5(1.51e-06)]_4 chrX:135342752-135343252 2.07e-01 100 chr10:73096766-73097266 6.48e-01 100 chr6:6788335-6788835 7.61e-01 100 chr12:124092474-12409297 2.03e-13 16_[-8(2.08e-13)]_8_[-8(2.08e-13)]_\ 10_[-8(2.09e-06)] chr12:119480555-11948105 2.21e-14 9_[+8(2.08e-13)]_29_[+8(5.04e-11)]_\ 18 chr14:34539787-34540287 4.30e-14 24_[+7(1.11e-10)]_[-5(8.64e-07)]_10_\ [-4(2.31e-09)]_1 chr16:89994815-89995315 9.83e-01 100 chr19:46600783-46601283 1.55e-04 57_[+10(1.60e-09)]_12 chr1:29237080-29237580 3.57e-06 8_[+1(4.65e-06)]_[-5(2.03e-06)]_11_\ [-9(4.60e-07)]_37 chr19:6717434-6717934 1.04e-11 2_[-9(1.02e-09)]_[+1(1.20e-06)]_11_\ [-9(2.89e-08)]_19_[-2(4.82e-07)] chr13:110965225-11096572 5.49e-02 8_[-10(8.11e-05)]_14_\ [-10(5.47e-05)]_16 chr19:30701035-30701535 9.63e-13 3_[+2(1.64e-11)]_3_[+5(8.50e-07)]_\ 11_[+2(9.53e-10)]_2_[-1(9.92e-10)]_13 chr15:27358799-27359299 4.04e-02 60_[-8(4.44e-05)]_18 chr7:157432922-157433422 4.81e-08 63_[+2(4.30e-08)]_[-1(1.59e-05)]_1 chr1:31386566-31387066 5.73e-07 21_[+8(6.32e-05)]_9_[+2(2.12e-06)]_\ 7_[+5(3.75e-06)]_9 chr8:94719600-94720100 6.90e-02 100 chr1:32292135-32292635 1.15e-01 16_[+6(2.35e-05)]_9_[+6(1.07e-05)]_\ 31 chr19:36797502-36798002 9.69e-01 100 chr11:72238111-72238611 5.11e-01 100 chr16:3283242-3283742 5.44e-01 100 chr5:75336638-75337138 2.88e-01 100 chr7:152025272-152025772 6.45e-01 100 chr12:990671-991171 7.77e-15 63_[+1(1.66e-10)]_[+1(3.07e-09)]_5 chr17:996897-997397 8.73e-01 100 chr20:57748605-57749105 1.13e-10 73_[-2(8.88e-11)]_7 chr1:151281408-151281908 9.01e-01 100 chr1:225653482-225653982 5.90e-01 100 chr22:45291306-45291806 1.48e-12 3_[-2(2.72e-08)]_3_[-9(1.32e-06)]_9_\ [+1(1.24e-09)]_12_[-9(5.63e-06)]_5 chr19:49850650-49851150 9.05e-01 100 chr12:51025935-51026435 1.83e-01 100 chr7:74079479-74079979 8.92e-19 2_[+5(8.64e-07)]_1_[-7(4.31e-11)]_2_\ [+3(7.63e-18)]_31 chr7:101815166-101815666 4.00e-01 100 chr1:163321605-163322105 1.19e-01 100 chr1:201435693-201436193 7.17e-22 [-5(2.81e-06)]_11_[+1(1.66e-10)]_\ [-2(2.19e-11)]_1_[+6(5.76e-10)]_18 chr12:1605005-1605505 6.10e-16 1_[+1(5.62e-08)]_10_[+1(1.96e-08)]_\ [+6(2.57e-06)]_3_[-2(3.73e-09)]_12 chr15:83010765-83011265 6.46e-01 100 chr22:44479663-44480163 3.51e-14 8_[+8(2.08e-13)]_2_[+8(3.45e-13)]_2_\ [+8(3.45e-13)]_22 chr19:53554104-53554604 1.21e-03 45_[+1(6.69e-06)]_16_[-2(2.93e-05)]_\ 3 chr19:35693960-35694460 3.71e-04 4_[-6(5.03e-07)]_10_[+8(3.26e-05)]_\ 8_[-6(8.38e-09)]_12 chr17:4949521-4950021 6.58e-01 100 chr1:32817091-32817591 8.70e-01 100 chr6:97214981-97215481 4.95e-01 100 chr22:37686101-37686601 2.18e-01 100 chr6:143450495-143450995 8.73e-01 100 chr16:85522953-85523453 2.77e-09 9_[-2(2.17e-07)]_21_[-2(4.37e-07)]_\ 5_[-9(1.10e-06)]_9 chr19:2095991-2096491 3.44e-01 100 chr4:24472673-24473173 9.21e-24 4_[+6(1.07e-05)]_[-2(8.08e-06)]_2_\ [-2(5.95e-13)]_3_[+1(3.60e-05)]_13 chr9:87270343-87270843 2.59e-16 [+1(1.66e-10)]_19_[-6(1.41e-06)]_43 chr19:41262494-41262994 1.75e-02 60_[-7(2.58e-08)]_18 chr9:135967568-135968068 6.10e-16 15_[+1(1.66e-10)]_[+1(6.69e-06)]_11_\ [-5(3.25e-05)]_2_[-2(3.25e-07)]_8 chr19:39320102-39320602 9.83e-17 3_[-1(1.66e-10)]_[-1(1.66e-10)]_15_\ [+7(1.27e-05)]_28 chr1:84298400-84298900 1.13e-02 74_[+5(7.92e-05)]_14 chr17:68511944-68512444 1.14e-02 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9.98e-02 1_[+8(8.91e-05)]_77 chr6:31652090-31652590 1.98e-16 30_[-1(1.66e-10)]_[+2(5.95e-13)]_34 chr1:1374992-1375492 8.85e-01 100 chr2:241620253-241620753 2.04e-09 13_[-2(2.40e-07)]_16_[-9(8.35e-06)]_\ 6_[+6(9.67e-07)]_7 chr17:4143132-4143632 6.92e-16 43_[-7(1.69e-09)]_2_[+3(1.74e-18)]_\ 3 chr19:49495487-49495987 8.39e-19 27_[-10(1.82e-16)]_2_[-3(8.51e-17)]_\ 10 chr5:3323703-3324203 1.51e-06 4_[-9(3.20e-05)]_5_[-9(1.10e-06)]_\ [-9(5.83e-09)]_[-9(1.10e-06)]_[-2(2.03e-05)]_7 chr21:44873797-44874297 6.58e-01 100 chr19:6532183-6532683 1.30e-11 4_[-5(2.89e-05)]_1_[-2(8.11e-10)]_6_\ [+1(1.71e-08)]_2_[-2(1.77e-06)]_[+1(6.87e-07)]_3 chr3:169762996-169763496 1.97e-04 51_[+4(9.53e-10)]_18 chr19:39033031-39033531 3.48e-13 35_[+4(2.70e-18)]_12_[+5(8.64e-07)]_\ 10 chr6:108049814-108050314 9.39e-01 100 chr12:128782205-12878270 9.17e-01 100 chr19:58380517-58381017 7.90e-01 100 chr1:234507000-234507500 5.95e-01 100 chr12:124914541-12491504 8.95e-01 100 chr16:89995558-89996058 9.54e-01 100 chr21:43728508-43729008 2.02e-02 75_[+6(2.35e-05)]_3 chr19:40598079-40598579 5.29e-01 100 chr12:122021704-12202220 2.60e-16 13_[-2(4.97e-12)]_[-2(5.95e-13)]_2_\ [-2(1.94e-06)]_2_[+1(1.29e-06)]_7 chr15:84570943-84571443 1.87e-05 70_[+5(4.66e-05)]_2_[-5(1.59e-06)]_\ 4 chr10:17201420-17201920 1.96e-03 63_[-10(9.19e-06)]_6 chr12:124567588-12456808 9.60e-09 17_[-1(1.51e-08)]_67 chr6:26537315-26537815 8.51e-01 100 chr3:53347413-53347913 8.36e-01 100 chr6:35259421-35259921 3.43e-01 58_[+6(3.40e-05)]_20 chr19:50134098-50134598 3.95e-21 21_[+4(2.70e-18)]_11_[+5(5.25e-07)]_\ 1_[-7(2.39e-12)]_2 chr13:113296806-11329730 8.10e-01 100 chr15:65422263-65422763 2.29e-17 56_[-1(1.66e-10)]_[+2(5.95e-13)]_8 chr6:85642864-85643364 3.58e-07 [-6(8.77e-05)]_6_[+8(1.25e-08)]_14_\ [-6(5.03e-07)]_14 chr19:40403803-40404303 7.00e-09 49_[-3(7.44e-17)]_21 chr15:89893907-89894407 3.61e-01 100 chr12:49060599-49061099 6.54e-01 100 chr20:63339351-63339851 3.22e-02 19_[+8(8.91e-05)]_59 chr19:12937967-12938467 7.73e-05 20_[+6(8.99e-10)]_58 chrX:120309457-120309957 1.18e-08 11_[-6(1.03e-10)]_32_[-6(3.40e-13)]_\ [-5(5.76e-07)]_1 chr19:35701842-35702342 9.28e-19 13_[-4(9.99e-16)]_25_[-3(3.42e-17)]_\ 1 chr1:228457455-228457955 5.42e-01 100 chr6:110179489-110179989 9.25e-01 100 chr7:35186082-35186582 7.71e-02 100 chr1:1000637-1001137 5.11e-01 100 chr6:31197093-31197593 4.78e-22 10_[-10(3.19e-16)]_1_[-3(4.97e-12)]_\ 2_[+7(2.73e-09)]_4 chr19:33458234-33458734 5.25e-13 1_[-9(6.09e-06)]_2_[-9(3.30e-08)]_2_\ [-9(5.63e-06)]_6_[-5(7.67e-08)]_17_[-5(7.67e-08)] chr3:168096033-168096533 3.97e-15 16_[+1(1.66e-10)]_[+1(1.66e-10)]_52 chr19:8240365-8240865 2.01e-17 20_[+1(1.66e-10)]_[+1(1.46e-09)]_6_\ [+3(7.43e-05)]_12 chr6:96924554-96925054 3.18e-14 24_[+2(1.29e-05)]_4_[-1(1.66e-10)]_\ [-1(1.66e-10)]_4_[-1(1.72e-06)] chr12:55829108-55829608 2.60e-20 10_[+3(8.51e-17)]_2_[+10(4.85e-17)]_\ 27 chr2:43210664-43211164 3.45e-12 1_[-1(5.01e-06)]_13_[-1(8.26e-10)]_\ 54 chr12:46383577-46384077 5.28e-01 100 chr19:35717074-35717574 6.17e-01 100 chr19:30170757-30171257 1.96e-09 [-2(1.13e-06)]_8_[+1(1.69e-07)]_4_\ [+1(5.15e-05)]_[-2(7.78e-07)]_[+1(1.86e-06)] chr1:150876809-150877309 1.89e-08 47_[+4(7.70e-15)]_22 chr1:40374331-40374831 5.15e-15 65_[+1(1.66e-10)]_[+1(3.01e-08)]_3 chr20:3159880-3160380 2.57e-15 4_[+3(1.06e-15)]_25_[+4(6.64e-14)]_\ 10 chr17:79839595-79840095 2.52e-01 71_[+7(2.37e-05)]_7 chr19:47743416-47743916 4.31e-02 100 chr17:63842574-63843074 8.45e-01 100 chr19:56393604-56394104 3.49e-07 40_[-2(7.78e-07)]_40 chr1:26620519-26621019 6.93e-01 100 chr16:30657790-30658290 8.31e-01 100 chr16:89489012-89489512 7.29e-15 [-1(4.86e-09)]_17_[+5(5.76e-07)]_1_\ [+5(1.03e-05)]_42 chr1:109484059-109484559 3.63e-01 100 chr19:47471971-47472471 2.11e-16 23_[-1(1.66e-10)]_[+2(2.55e-09)]_41 chr16:87383864-87384364 6.26e-01 100 chr20:62301584-62302084 1.72e-12 4_[+7(4.00e-09)]_1_[-5(1.95e-05)]_\ 16_[-4(4.85e-14)]_14 chr10:91608959-91609459 3.72e-23 20_[-6(1.64e-12)]_2_[-1(1.66e-10)]_\ [+2(6.61e-11)]_[-1(7.67e-05)]_4 chr1:28884742-28885242 8.97e-04 56_[+5(2.17e-05)]_12_[+2(2.12e-06)] chr17:3890047-3890547 5.62e-01 100 chr1:63523120-63523620 4.96e-01 100 chr1:184386550-184387050 3.26e-16 10_[+2(8.88e-11)]_10_[-1(1.66e-10)]_\ 1_[+5(7.67e-08)]_31 chr4:102827310-102827810 9.42e-03 62_[-6(1.04e-07)]_16 chr19:33795552-33796052 8.73e-01 100 chr1:31937361-31937861 3.04e-08 22_[-6(1.80e-06)]_29_[-1(9.42e-06)]_\ 11 chr11:65112360-65112860 8.12e-01 100 chr19:35899577-35900077 1.15e-02 55_[-6(1.41e-06)]_23 chr19:36488978-36489478 8.70e-08 5_[+2(6.88e-06)]_13_[+2(1.40e-05)]_\ 20_[-1(2.41e-07)]_6 chr16:31094886-31095386 1.11e-14 39_[+4(2.70e-18)]_12_[+5(8.64e-07)]_\ 6 chr19:6280171-6280671 9.84e-01 100 chr5:75049730-75050230 3.89e-02 18_[-5(3.53e-05)]_70 chr1:226711204-226711704 3.45e-27 2_[+6(1.64e-12)]_14_[-2(5.95e-13)]_\ [-9(4.45e-06)]_26 chr1:111990062-111990562 6.40e-04 84_[+1(5.39e-06)] chr3:58334727-58335227 4.41e-22 1_[-2(5.95e-13)]_12_[-2(5.95e-13)]_\ 16_[-4(8.83e-11)] chr22:37844448-37844948 2.54e-22 2_[-10(6.82e-10)]_2_[-3(8.51e-17)]_\ 2_[+7(3.14e-12)]_11 chr2:187581220-187581720 4.74e-01 100 chr19:38544185-38544685 8.32e-02 100 chr17:81253563-81254063 2.97e-11 [+8(2.23e-11)]_14_[+4(3.05e-11)]_5_\ [+8(2.23e-11)]_6 chr19:33250574-33251074 1.51e-11 [+2(4.47e-05)]_3_[+2(3.87e-06)]_1_\ [-1(1.04e-06)]_4_[+9(1.21e-06)]_3_[-1(1.23e-07)]_1 chr7:157880929-157881429 4.97e-02 100 chr19:39390676-39391176 8.23e-01 100 chr1:226703224-226703724 1.79e-01 47_[-6(8.08e-05)]_2_[-6(2.03e-06)]_\ 7 chr14:24114611-24115111 5.84e-01 100 chr12:12266873-12267373 1.97e-01 100 chr15:72230356-72230856 9.02e-02 [+6(3.73e-05)]_78 chr10:93702407-93702907 4.24e-01 68_[+6(1.94e-05)]_10 chr9:11173-11673 7.52e-01 100 chr15:30173017-30173517 5.47e-14 5_[+1(1.96e-08)]_1_[-9(7.24e-05)]_1_\ [-9(5.08e-07)]_2_[-9(6.45e-09)]_2_[+1(1.96e-08)]_9 chr19:36604656-36605156 1.17e-06 18_[+5(1.19e-05)]_47_[+2(1.35e-06)]_\ 3 chr18:49019490-49019990 8.89e-11 23_[-2(5.39e-06)]_23_[-9(2.18e-09)]_\ [+1(1.55e-07)]_2 chr15:41332048-41332548 6.04e-01 100 chr21:38660624-38661124 5.25e-06 24_[-2(4.17e-05)]_6_[-2(8.54e-07)]_\ 30 chrUn_KI270467v1:2669-31 4.43e-01 80_[+5(5.10e-05)]_8 chr1:240562781-240563281 4.48e-14 4_[-2(3.28e-09)]_2_[-2(1.01e-10)]_6_\ [-2(1.33e-10)]_7_[-2(3.28e-09)]_1 chr12:32679240-32679740 5.96e-01 100 chr16:981056-981556 6.92e-24 27_[-2(5.95e-13)]_[+6(1.64e-12)]_\ [+6(1.64e-12)]_9 chr19:18557586-18558086 6.75e-01 100 chr19:41884139-41884639 2.93e-02 72_[+6(2.89e-06)]_6 chr17:50397392-50397892 6.93e-01 100 chr19:33796973-33797473 2.78e-16 74_[-2(5.95e-13)]_6 chr15:65610912-65611412 9.98e-01 100 chr3:48087494-48087994 1.23e-15 8_[+2(8.12e-09)]_[-1(5.24e-07)]_8_\ [-1(1.66e-10)]_[-1(1.66e-10)]_16 chr1:53945278-53945778 1.65e-02 59_[-3(2.64e-05)]_11 chr5:93582537-93583037 4.45e-15 36_[-2(4.97e-12)]_44 chr1:44213163-44213663 8.14e-01 100 chr19:40715622-40716122 1.90e-17 1_[-6(4.86e-05)]_1_[+1(1.66e-10)]_\ [-2(3.87e-06)]_40 chr15:75625352-75625852 9.10e-01 100 chr7:151782869-151783369 9.67e-01 100 chr16:30598236-30598736 6.82e-14 12_[-7(3.70e-09)]_2_[+3(1.49e-16)]_\ 34 chr13:44191833-44192333 1.03e-06 12_[-2(2.19e-05)]_45_[-8(7.89e-09)]_\ 1 chr3:9731359-9731859 8.55e-01 100 chr1:156661285-156661785 1.73e-15 70_[-2(5.95e-13)]_10 chr2:241881395-241881895 9.75e-17 1_[+1(1.66e-10)]_[+1(1.66e-10)]_1_\ [-5(7.67e-08)]_54 chr19:30046336-30046836 1.95e-01 41_[-5(8.96e-05)]_47 chr1:25998132-25998632 1.23e-01 100 chr16:1271670-1272170 6.56e-01 100 chr1:146038240-146038740 5.12e-20 28_[-10(4.85e-17)]_2_[-3(5.26e-17)]_\ 9 chr19:36572857-36573357 4.71e-12 7_[+9(1.21e-06)]_13_[-1(3.01e-08)]_\ 48 chr13:75480681-75481181 1.07e-16 1_[+2(5.95e-13)]_79 chr19:39125845-39126345 4.10e-02 100 chr22:29120048-29120548 4.58e-05 1_[-8(7.22e-05)]_8_[-8(1.19e-07)]_7_\ [-8(1.19e-07)]_18 chr10:41882157-41882657 6.51e-01 100 chr1:37989827-37990327 3.47e-01 100 chr12:93442015-93442515 3.23e-01 37_[-4(9.02e-05)]_32 chr12:6689011-6689511 8.45e-09 49_[+2(1.51e-08)]_31 chr16:89720773-89721273 3.49e-01 100 chr1:236101323-236101823 9.19e-18 2_[-5(1.51e-06)]_[+1(3.85e-10)]_9_\ [+1(1.55e-07)]_1_[+1(5.79e-05)]_[-2(2.94e-07)]_8 chr18:54269117-54269617 2.68e-02 100 chr19:47743202-47743702 3.87e-16 15_[+1(1.66e-10)]_[-2(5.95e-13)]_49 chr3:156674006-156674506 7.91e-02 11_[-6(1.31e-05)]_67 chr19:32745700-32746200 4.11e-17 3_[+6(4.54e-06)]_12_[+1(3.01e-08)]_\ 30_[+1(1.66e-10)]_1 chr2:192195055-192195555 3.19e-04 54_[-8(2.45e-07)]_24 chr19:41310153-41310653 1.96e-01 100 chr12:120292135-12029263 4.16e-17 6_[+3(2.52e-15)]_23_[+4(4.63e-15)]_\ 10 chr12:67269171-67269671 1.14e-01 10_[+6(1.45e-05)]_68 chr16:3184025-3184525 1.52e-01 100 chr2:200509943-200510443 5.25e-01 100 chr12:19439273-19439773 1.05e-01 100 chr19:40662936-40663436 1.76e-01 100 chr19:34041860-34042360 7.07e-01 100 chr19:36139505-36140005 9.88e-01 100 chr12:8697809-8698309 8.47e-12 15_[-2(6.75e-08)]_[+1(3.70e-06)]_25_\ [+6(3.40e-05)]_2 chr17:1293401-1293901 1.26e-05 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chr6:53651755-53652255 7.32e-01 100 chr17:61412238-61412738 6.28e-01 100 chr4:189234918-189235418 3.05e-04 15_[-9(1.75e-06)]_18_[-9(1.75e-06)]_\ 18_[-9(1.75e-06)]_1 chr12:111396971-11139747 8.87e-01 100 chr1:229217738-229218238 1.35e-02 39_[+3(9.80e-05)]_31 chr1:10793916-10794416 1.23e-14 18_[-2(7.04e-10)]_[-2(2.40e-07)]_2_\ [+1(1.66e-10)]_[+1(3.60e-05)]_8 chr21:32771745-32772245 2.91e-06 4_[+6(1.64e-12)]_2_[+6(5.08e-06)]_\ 50 chr19:3987839-3988339 1.42e-03 54_[-10(4.17e-10)]_15 chr19:36772274-36772774 7.67e-06 23_[+5(6.89e-05)]_6_[-1(8.57e-05)]_\ 17_[-1(5.62e-08)]_10 chr1:185316966-185317466 7.46e-01 100 chr7:128360891-128361391 4.42e-17 13_[-1(1.66e-10)]_[+2(5.95e-13)]_31_\ [+2(5.56e-09)] chr11:68213550-68214050 9.37e-01 100 chr16:30894179-30894679 1.01e-07 51_[-9(9.00e-08)]_33 chr21:36069817-36070317 1.00e+00 100 chr20:60163-60663 8.32e-02 43_[-10(5.34e-05)]_26 chr22:45979332-45979832 1.29e-15 3_[+9(4.29e-09)]_6_[+9(4.60e-07)]_\ [+9(3.31e-10)]_1_[+9(7.23e-08)]_4_[+9(3.42e-05)]_6 chr3:194352620-194353120 1.24e-14 2_[+1(1.12e-06)]_4_[-5(1.19e-05)]_\ 11_[-9(5.82e-10)]_[-2(1.96e-07)]_6_[-5(3.88e-05)]_1 chr5:80407530-80408030 4.37e-01 100 chr1:206612150-206612650 8.50e-01 100 chr16:49084570-49085070 6.45e-01 100 chr7:156908896-156909396 2.48e-01 100 chr6:33208139-33208639 4.74e-01 100 chr7:152464190-152464690 8.10e-02 14_[-6(3.24e-06)]_64 chr22:31489854-31490354 9.44e-01 100 chr1:114757959-114758459 6.00e-01 100 chr1:34681449-34681949 6.26e-01 100 chr7:158829489-158829989 5.24e-02 38_[+6(8.08e-05)]_40 chr6:107027794-107028294 1.66e-16 10_[+3(2.94e-16)]_2_[+10(3.21e-12)]_\ 27 chr9:131373516-131374016 1.38e-03 58_[-7(1.02e-09)]_20 chr1:161097502-161098002 3.16e-22 [-6(1.64e-12)]_13_[+1(1.66e-10)]_\ [-2(5.95e-13)]_29 chr4:189233709-189234209 2.46e-03 [-9(1.75e-06)]_18_[-9(1.75e-06)]_18_\ [-9(1.75e-06)]_16 chr22:34105436-34105936 6.09e-01 100 chr20:58650939-58651439 1.48e-01 57_[+6(1.94e-05)]_21 chr19:36796913-36797413 4.65e-15 27_[-3(9.58e-15)]_2_[+7(4.62e-09)]_\ 2_[-5(5.46e-05)]_5 chr19:39402389-39402889 2.96e-01 100 chrX:73943974-73944474 6.12e-01 27_[+10(9.95e-05)]_42 chr19:39411878-39412378 1.21e-05 26_[-2(9.47e-06)]_8_[-5(7.77e-06)]_\ 34 chr19:38336452-38336952 1.57e-01 68_[+6(4.07e-05)]_10 chr19:36851024-36851524 1.11e-11 18_[+1(1.66e-10)]_66 chr14:103105049-10310554 3.25e-11 11_[+1(1.24e-09)]_13_[+1(2.27e-08)]_\ 22_[+1(1.96e-08)]_6 chr19:8832009-8832509 2.13e-01 100 chr19:48795168-48795668 3.15e-01 100 chr19:37655865-37656365 9.43e-02 100 chr1:93078872-93079372 5.84e-01 100 chr4:88456599-88457099 5.03e-03 17_[-2(5.14e-05)]_63 chr22:23893856-23894356 5.93e-02 100 chr19:510537-511037 3.92e-01 100 chr1:1943945-1944445 8.40e-01 100 chr19:37371123-37371623 1.15e-12 7_[-2(2.53e-05)]_50_[-2(2.90e-09)]_\ 3 chr1:155001568-155002068 7.87e-01 100 chr16:57628751-57629251 9.61e-11 4_[+1(2.27e-08)]_[-2(4.96e-06)]_\ [-2(1.33e-08)]_4_[-2(2.03e-05)]_[+1(7.09e-08)] chr1:46340589-46341089 8.14e-01 100 chr22:24010862-24011362 4.22e-16 14_[-1(1.66e-10)]_[-1(1.66e-10)]_\ [-1(4.86e-09)]_[-1(2.94e-06)]_6_[-1(2.64e-08)] chr12:130584385-13058488 9.10e-07 9_[+8(1.36e-10)]_4_[+8(5.10e-07)]_\ 12_[+8(6.32e-05)]_9 chr1:244918691-244919191 2.78e-04 14_[-1(9.42e-06)]_70 chr9:97411663-97412163 1.12e-01 100 chr19:33274033-33274533 2.93e-10 3_[-5(2.03e-06)]_66_[+1(1.12e-08)]_\ 3 chr22:46758687-46759187 8.84e-01 100 chr1:234723932-234724432 6.52e-05 [+6(8.38e-09)]_3_[+6(1.40e-09)]_53 chr19:36837854-36838354 5.31e-15 53_[+2(5.95e-13)]_2_[-1(1.66e-10)]_\ 9 chr12:132710417-13271091 4.90e-02 100 chr5:93621365-93621865 5.00e-01 100 chr8:144456666-144457166 2.89e-02 45_[-3(5.21e-05)]_25 chr5:36241720-36242220 3.59e-01 100 chr9:4984676-4985176 6.15e-01 100 chr18:55589737-55590237 6.72e-01 100 chr17:1258901-1259401 2.23e-16 2_[+7(1.34e-11)]_1_[-5(6.37e-05)]_\ 11_[-4(1.58e-16)]_21 chr4:82900703-82901203 2.03e-01 100 chr6:30907488-30907988 1.74e-12 [-5(8.64e-07)]_13_[-4(2.19e-17)]_44 chr10:25174260-25174760 6.24e-04 15_[-6(6.31e-06)]_63 chr16:25258025-25258525 9.24e-01 100 chr1:44404966-44405466 5.18e-10 [+1(1.51e-08)]_8_[+1(9.33e-08)]_\ [-2(1.29e-07)]_40 chr19:37594258-37594758 1.86e-02 23_[+5(1.27e-05)]_65 chr3:134795191-134795691 6.48e-15 13_[-1(1.46e-09)]_[+2(1.35e-06)]_14_\ [-1(2.94e-06)]_21 chr9:137240306-137240806 2.84e-01 41_[+6(4.86e-05)]_37 chr19:37293505-37294005 1.53e-10 30_[+6(1.64e-12)]_24_[-1(1.20e-06)]_\ 8 chr8:630616-631116 3.13e-02 100 chr17:81871322-81871822 8.70e-01 100 chr1:183471813-183472313 1.18e-01 17_[+6(8.08e-05)]_61 chr17:77233781-77234281 4.69e-01 100 chr20:52972201-52972701 3.43e-18 3_[-2(5.41e-08)]_2_[+1(3.85e-10)]_\ [+1(2.01e-06)]_3_[+1(3.93e-09)]_24 chr21:39313558-39314058 2.56e-02 68_[+6(1.45e-05)]_10 chr12:133129933-13313043 1.96e-01 73_[+2(8.77e-05)]_7 chr16:3457819-3458319 8.09e-01 100 chr19:35947339-35947839 3.20e-16 29_[+6(4.86e-05)]_7_[+1(1.66e-10)]_\ [-2(5.95e-13)]_6 chr10:91694173-91694673 2.71e-01 100 chr19:2945121-2945621 3.94e-03 13_[+6(6.29e-05)]_65 chr10:93209005-93209505 7.33e-01 40_[-4(9.02e-05)]_29 chr12:130764512-13076501 9.65e-05 17_[-8(8.74e-07)]_26_[-8(1.08e-08)]_\ 13 chr1:32179613-32180113 4.02e-01 100 chr7:66920782-66921282 1.71e-09 1_[+2(6.44e-07)]_5_[+2(8.40e-08)]_\ 13_[+5(1.27e-05)]_11_[+9(1.45e-06)]_2 chr19:36916362-36916862 6.63e-11 74_[-2(1.45e-09)]_6 chr17:7014584-7015084 7.18e-01 100 chr1:7704909-7705409 8.15e-03 34_[-9(7.17e-06)]_50 chr19:1383509-1384009 2.51e-01 100 chr19:49118750-49119250 1.11e-02 100 chr5:1950751-1951251 2.77e-04 19_[-5(8.96e-05)]_[+1(1.31e-05)]_8_\ [-2(8.21e-05)]_7_[+1(1.31e-05)]_2 chr1:235504677-235505177 1.61e-01 100 chr19:12782324-12782824 1.77e-02 58_[-7(3.33e-05)]_20 chr2:36785160-36785660 1.36e-01 100 chr13:113490634-11349113 4.84e-01 100 chr8:41490066-41490566 3.81e-03 100 chr5:176591620-176592120 6.57e-14 [-8(3.45e-13)]_7_[-8(1.87e-06)]_2_\ [-8(3.45e-13)]_25 chr1:3992036-3992536 2.22e-02 9_[-8(1.47e-07)]_69 chr1:125179929-125180429 7.26e-01 100 chr6:28542767-28543267 2.80e-01 100 chr14:73825527-73826027 7.35e-01 100 chr7:2314610-2315110 1.16e-07 17_[-6(2.57e-06)]_26_[-6(7.47e-07)]_\ 13 chr12:57111963-57112463 1.83e-17 [+5(7.67e-08)]_47_[-1(1.66e-10)]_\ [+2(5.95e-13)]_5 chr19:41859745-41860245 4.27e-01 67_[-6(6.85e-05)]_11 chr19:44259443-44259943 1.85e-19 1_[+7(8.01e-13)]_1_[-5(8.64e-07)]_\ 12_[-4(1.55e-15)]_21 chr10:100878423-10087892 7.12e-02 100 chr6:36680334-36680834 8.74e-03 [+8(4.20e-05)]_16_[+9(1.12e-05)]_46 chr17:45148395-45148895 4.95e-02 100 chr10:101830512-10183101 5.83e-09 53_[-1(2.64e-08)]_31 chr19:2840899-2841399 5.11e-01 100 chr19:38224224-38224724 1.18e-06 2_[+2(1.29e-07)]_6_[-1(5.46e-05)]_\ 10_[-1(2.33e-06)]_4_[+2(8.54e-07)]_6 chr1:31387481-31387981 2.12e-09 12_[-1(7.69e-06)]_23_[+2(5.31e-07)]_\ 12_[-1(3.83e-05)]_1 chr17:74514064-74514564 2.38e-05 14_[-8(3.82e-08)]_23_[-8(9.96e-09)]_\ 19 chr17:40140151-40140651 2.73e-15 2_[-1(1.66e-10)]_4_[-1(1.66e-10)]_\ [-1(1.66e-10)]_[+2(5.95e-13)]_26 chr17:78558332-78558832 2.08e-02 100 chr19:5720466-5720966 4.08e-06 70_[-8(1.26e-09)]_8 chr16:10808-11308 6.86e-01 66_[+7(8.11e-05)]_12 chr19:33177275-33177775 6.45e-01 100 chr1:155244582-155245082 1.21e-05 9_[+6(3.19e-09)]_6_[+6(7.19e-10)]_8_\ [+6(1.64e-12)]_11 chr1:228486541-228487041 9.74e-01 100 chr17:64649074-64649574 3.80e-01 21_[-10(9.30e-05)]_48 chr1:236097030-236097530 8.41e-01 100 chr11:45771106-45771606 8.73e-03 100 chr5:140564341-140564841 1.08e-01 100 chr10:75235836-75236336 9.70e-01 100 chr15:73897315-73897815 1.58e-02 13_[+8(5.23e-05)]_65 chr19:37594975-37595475 1.90e-13 26_[-2(8.67e-12)]_[+1(6.69e-06)]_\ [+1(3.60e-05)]_22 chr19:12847530-12848030 8.53e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: wotan ********************************************************************************