Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
GGAGGCY | 7 | GGAGGCT |
ATYCTCC | 7 | ATCCTCC |
CAGTGAGY | 8 | CAGTGAGC |
CTTGARCC | 8 | CTTGAGCC |
CRRCCTC | 7 | CAGCCTC |
TARTCCCA | 8 | TAATCCCA |
GCTACTY | 7 | GCTACTC |
AMCTCCTG | 8 | AACTCCTG |
GAGGY | 5 | GAGGC |
AGGCTGGW | 8 | AGGCTGGA |
TGCAGTGR | 8 | TGCAGTGG |
CACTWTG | 7 | CACTTTG |
CAGGCRTG | 8 | CAGGCATG |
AAAATWA | 7 | AAAATTA |
AGATYGCG | 8 | AGATCGCG |
GGGCAACA | 8 | GGGCAACA |
CTCTACWA | 8 | CTCTACTA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.227 C 0.273 G 0.273 T 0.227
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
CACTWTG | DREME-12 | chr10 | - | 1085230 | 1085236 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr7 | + | 1137551 | 1137557 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | - | 1203316 | 1203322 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 1318409 | 1318415 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 1318630 | 1318636 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 2096002 | 2096008 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr16 | - | 2129119 | 2129125 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 3784063 | 3784069 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 4143278 | 4143284 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | - | 4624877 | 4624883 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 5853858 | 5853864 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr7 | + | 6447230 | 6447236 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 8271966 | 8271972 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 8378082 | 8378088 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 9802854 | 9802860 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 9803081 | 9803087 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 10055671 | 10055677 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr2 | - | 10121747 | 10121753 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | - | 11180163 | 11180169 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr18 | + | 12378461 | 12378467 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr18 | - | 12378524 | 12378530 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr18 | + | 12518379 | 12518385 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 12919820 | 12919826 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 15863592 | 15863598 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 16386583 | 16386589 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr21 | + | 17455007 | 17455013 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr8 | + | 17496045 | 17496051 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr8 | + | 17496208 | 17496214 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 17813227 | 17813233 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 17865349 | 17865355 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 18182830 | 18182836 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 18365602 | 18365608 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 19506966 | 19506972 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 19800392 | 19800398 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 19800406 | 19800412 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 21322706 | 21322712 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 24043860 | 24043866 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr4 | - | 26373030 | 26373036 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr8 | + | 26374184 | 26374190 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr6 | + | 26384393 | 26384399 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 27331725 | 27331731 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 28373684 | 28373690 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 28865124 | 28865130 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr22 | - | 29764761 | 29764767 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr21 | + | 31658604 | 31658610 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr18 | - | 32020306 | 32020312 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr11 | - | 32583455 | 32583461 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 32963467 | 32963473 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 33064095 | 33064101 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr6 | + | 33621682 | 33621688 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 34218262 | 34218268 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | + | 34223872 | 34223878 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | - | 34415941 | 34415947 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr20 | - | 34709667 | 34709673 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | - | 35454326 | 35454332 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr22 | - | 35589940 | 35589946 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | + | 37192314 | 37192320 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr22 | - | 37844826 | 37844832 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 38316257 | 38316263 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 38316407 | 38316413 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 38402487 | 38402493 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr22 | + | 38461961 | 38461967 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 38517870 | 38517876 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 38846605 | 38846611 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 39338045 | 39338051 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr21 | - | 39349976 | 39349982 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 39432089 | 39432095 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 39432130 | 39432136 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 39486210 | 39486216 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 40404062 | 40404068 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 40416627 | 40416633 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | - | 40416757 | 40416763 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 40604595 | 40604601 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr22 | - | 40711422 | 40711428 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | + | 41006216 | 41006222 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | - | 42738066 | 42738072 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr21 | + | 42893939 | 42893945 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr5 | - | 43043382 | 43043388 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | - | 43092119 | 43092125 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | - | 43092427 | 43092433 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 43368652 | 43368658 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 43594585 | 43594591 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 43908486 | 43908492 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr20 | + | 44117032 | 44117038 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 44261191 | 44261197 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | - | 44728596 | 44728602 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 45556630 | 45556636 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 45556941 | 45556947 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 46101503 | 46101509 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 46108919 | 46108925 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 46145988 | 46145994 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 46785133 | 46785139 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | - | 47251104 | 47251110 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 47251183 | 47251189 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | + | 49491466 | 49491472 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | + | 49491586 | 49491592 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr19 | + | 49503029 | 49503035 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr19 | + | 49817675 | 49817681 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 51637242 | 51637248 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | + | 53046243 | 53046249 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr18 | + | 54269047 | 54269053 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr3 | - | 57014943 | 57014949 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr12 | + | 57487600 | 57487606 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 59154028 | 59154034 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 59292194 | 59292200 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 60088574 | 60088580 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 62470791 | 62470797 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr18 | - | 62579026 | 62579032 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr20 | + | 62823088 | 62823094 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | + | 65532377 | 65532383 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | - | 66357183 | 66357189 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr8 | - | 66473396 | 66473402 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr18 | - | 70286127 | 70286133 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr18 | - | 70286392 | 70286398 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr15 | - | 72183131 | 72183137 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 74047183 | 74047189 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | - | 74223305 | 74223311 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | + | 75009655 | 75009661 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr10 | - | 75111071 | 75111077 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 75368481 | 75368487 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 75368804 | 75368810 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr15 | + | 75544285 | 75544291 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | - | 75574265 | 75574271 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr15 | + | 75641163 | 75641169 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr5 | + | 75717859 | 75717865 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 75905337 | 75905343 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 75905669 | 75905675 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 76556792 | 76556798 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 76727458 | 76727464 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr17 | - | 76727655 | 76727661 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 77677090 | 77677096 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr15 | + | 80060675 | 80060681 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | - | 81338229 | 81338235 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr5 | + | 81393443 | 81393449 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr17 | + | 81892224 | 81892230 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 84620965 | 84620971 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr16 | - | 85297654 | 85297660 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr16 | + | 85297707 | 85297713 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr16 | - | 85297769 | 85297775 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr16 | + | 85403541 | 85403547 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr2 | - | 85445700 | 85445706 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr9 | + | 86348504 | 86348510 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr16 | - | 86519990 | 86519996 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr16 | + | 87384926 | 87384932 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr6 | - | 89353541 | 89353547 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr12 | + | 93467040 | 93467046 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | - | 98517069 | 98517075 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr7 | + | 99375814 | 99375820 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr7 | + | 100118409 | 100118415 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr8 | - | 100157770 | 100157776 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr7 | + | 101214589 | 101214595 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr7 | - | 101218534 | 101218540 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 101275537 | 101275543 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr3 | + | 101675846 | 101675852 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr10 | - | 102064920 | 102064926 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr11 | - | 103110270 | 103110276 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr10 | + | 103760320 | 103760326 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr10 | - | 103971530 | 103971536 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr4 | + | 107827737 | 107827743 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr6 | + | 107952509 | 107952515 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 109216881 | 109216887 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr5 | + | 110739720 | 110739726 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr12 | + | 113184576 | 113184582 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | + | 121210531 | 121210537 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | - | 123234060 | 123234066 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr12 | + | 123583761 | 123583767 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr5 | + | 124744520 | 124744526 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr12 | + | 124924764 | 124924770 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr9 | + | 127387897 | 127387903 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr12 | - | 132599608 | 132599614 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chrX | + | 136058601 | 136058607 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr4 | + | 139301167 | 139301173 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr8 | - | 144767470 | 144767476 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | - | 146035938 | 146035944 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | - | 146036235 | 146036241 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 146036314 | 146036320 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr5 | - | 150442956 | 150442962 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr6 | + | 150752863 | 150752869 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr6 | + | 156817387 | 156817393 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 160978509 | 160978515 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 160978685 | 160978691 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr3 | + | 171943509 | 171943515 | 5.41e-05 | 0.165 | cACTTTG |
CACTWTG | DREME-12 | chr3 | - | 171943818 | 171943824 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr5 | + | 172941030 | 172941036 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr5 | + | 181218581 | 181218587 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr3 | + | 186105891 | 186105897 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | - | 210336386 | 210336392 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 210336535 | 210336541 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | + | 223726813 | 223726819 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 225809594 | 225809600 | 5.41e-05 | 0.165 | cactttg |
CACTWTG | DREME-12 | chr1 | - | 225809657 | 225809663 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | - | 226405564 | 226405570 | 5.41e-05 | 0.165 | CACTTTG |
CACTWTG | DREME-12 | chr1 | + | 226405867 | 226405873 | 5.41e-05 | 0.165 | cactttg |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_24 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CACTWTG /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_24 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF770.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.