Database and Motifs High-scoring Motif Occurences Debugging Information


FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]

DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
AGTRGGG 7 AGTGGGG
GTACCARD 8 GTACCAGG
CAKTTYCA 8 CATTTTCA
CTAATAYA 8 CTAATACA
AAAGATAH 8 AAAGATAC
GYTGCTD 7 GCTGCTG
AAGTSRCT 8 AAGTCACT
AAAATRTG 8 AAAATGTG
CCTGWTAC 8 CCTGTTAC
CAATTTWC 8 CAATTTAC
YACTGCTR 8 CACTGCTA
AACCTCTG 8 AACCTCTG
ARAACAGA 8 AAAACAGA
ATAAAGAC 8 ATAAAGAC
TTACTGTR 8 TTACTGTA

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.273 C 0.227 G 0.227 T 0.273

SECTION I: HIGH-SCORING MOTIF OCCURENCES
Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
AAAGATAH DREME-5 chr2 + 337162 337169 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr9 + 1903527 1903534 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 13997563 13997570 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr12 + 14760081 14760088 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr10 + 16822246 16822253 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 17069182 17069189 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr21 + 25167129 25167136 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr14 + 29879595 29879602 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr13 + 31315171 31315178 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 31438426 31438433 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 32672122 32672129 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr18 + 33339954 33339961 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr22 + 33788439 33788446 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr20 + 36993162 36993169 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr10 + 37510744 37510751 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr14 + 44347518 44347525 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 47541917 47541924 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr18 + 50174213 50174220 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 50224770 50224777 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 51872342 51872349 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 55031338 55031345 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr12 + 64633698 64633705 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr17 + 66817969 66817976 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr18 + 69359988 69359995 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr17 + 71617983 71617990 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr13 + 76123776 76123783 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 77274233 77274240 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 78011220 78011227 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chrX + 78147365 78147372 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr7 + 79019923 79019930 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 79659697 79659704 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr8 + 81018842 81018849 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 83622362 83622369 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr10 + 83750817 83750824 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 88758922 88758929 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 89959603 89959610 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr16 + 90054088 90054095 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 90348654 90348661 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr14 + 91806297 91806304 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr7 + 94843764 94843771 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr8 + 96680663 96680670 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 98320404 98320411 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr13 + 100689378 100689385 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr10 + 103259144 103259151 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 107236968 107236975 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr3 + 112021907 112021914 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 113767025 113767032 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 115365984 115365991 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 115572933 115572940 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr10 + 118489325 118489332 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr11 + 120617946 120617953 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 121564719 121564726 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr7 + 123215552 123215559 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr8 + 126676438 126676445 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr7 + 131306298 131306305 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr8 + 135012351 135012358 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chrX + 139306921 139306928 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 139718609 139718616 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chrX + 140172023 140172030 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 143918831 143918838 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr6 + 145158850 145158857 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 148055396 148055403 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 151737053 151737060 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr7 + 151972039 151972046 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 153866971 153866978 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 158952588 158952595 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 165079065 165079072 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 166829991 166829998 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 171311803 171311810 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr3 + 173195066 173195073 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr4 + 173842899 173842906 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 174498173 174498180 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 175796636 175796643 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 175983584 175983591 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr5 + 179399535 179399542 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr3 + 197359679 197359686 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 214576402 214576409 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 222457310 222457317 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 224911451 224911458 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 226922279 226922286 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr2 + 227582568 227582575 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr1 + 236161946 236161953 2.12e-05 0.0724 aaagatac
AAAGATAH DREME-5 chr12 - 1549080 1549087 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr20 - 10125058 10125065 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 10756375 10756382 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr3 - 11408463 11408470 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 12649131 12649138 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 12834956 12834963 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 13219521 13219528 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr17 - 14169457 14169464 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr5 - 14605993 14606000 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr16 - 15982216 15982223 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr4 - 17862094 17862101 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 17868590 17868597 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr5 - 18617375 18617382 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 21804712 21804719 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr21 - 24419811 24419818 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr3 - 26097264 26097271 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr1 - 27681765 27681772 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr21 - 29254032 29254039 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr14 - 29566360 29566367 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr14 - 29840524 29840531 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr14 - 31331578 31331585 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr13 - 33162894 33162901 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr22 - 33788371 33788378 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr17 - 33959291 33959298 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 34884022 34884029 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr14 - 38062398 38062405 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr2 - 39360523 39360530 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 39456872 39456879 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr21 - 43000225 43000232 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 44865365 44865372 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr13 - 47874179 47874186 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 48720943 48720950 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr13 - 48827241 48827248 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr10 - 51455933 51455940 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 55570856 55570863 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr13 - 57846788 57846795 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr10 - 58731460 58731467 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr15 - 60296082 60296089 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 62514305 62514312 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr17 - 64439688 64439695 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 68443875 68443882 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 69019605 69019612 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr15 - 69708606 69708613 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr2 - 70799883 70799890 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr17 - 70985066 70985073 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr2 - 71658440 71658447 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr4 - 75533505 75533512 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr13 - 76899210 76899217 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr17 - 80604442 80604449 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr5 - 80850345 80850352 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 81728750 81728757 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 84291208 84291215 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 85865473 85865480 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 86806049 86806056 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 87205885 87205892 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr8 - 87786013 87786020 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 87789134 87789141 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 89038074 89038081 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr4 - 89446381 89446388 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr10 - 91098196 91098203 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 93314582 93314589 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 94321305 94321312 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 94627184 94627191 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr15 - 95701518 95701525 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr12 - 96086332 96086339 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 100622596 100622603 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr8 - 103563658 103563665 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr10 - 106327927 106327934 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 106342128 106342135 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr3 - 108279250 108279257 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr4 - 110219107 110219114 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr8 - 115309518 115309525 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 115495366 115495373 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 116997222 116997229 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr11 - 117406073 117406080 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 118305991 118305998 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr1 - 118377341 118377348 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr5 - 125254445 125254452 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 128377112 128377119 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr2 - 128708626 128708633 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr7 - 129661814 129661821 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr3 - 130203730 130203737 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr10 - 132600596 132600603 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 139306854 139306861 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 141506257 141506264 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr6 - 143786518 143786525 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chrX - 148669357 148669364 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr4 - 152146432 152146439 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr5 - 153935323 153935330 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr2 - 162079685 162079692 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr3 - 180008495 180008502 2.12e-05 0.0724 AAAGATAC
AAAGATAH DREME-5 chr1 + 50224847 50224854 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr11 + 76630928 76630935 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr8 + 80945272 80945279 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chrX + 82161405 82161412 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chrX + 82161490 82161497 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chrX + 85865538 85865545 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr7 + 87206029 87206036 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr12 + 96086399 96086406 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr8 + 103320441 103320448 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr14 + 105962723 105962730 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr6 + 131007483 131007490 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr5 + 148529664 148529671 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr5 + 158034802 158034809 4.67e-05 0.136 aaagataa
AAAGATAH DREME-5 chr5 - 4395925 4395932 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr13 - 21945396 21945403 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chrX - 24412454 24412461 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr16 - 24508170 24508177 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr5 - 26856359 26856366 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr21 - 28031252 28031259 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr14 - 38062315 38062322 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chrX - 41096878 41096885 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr14 - 65396255 65396262 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr3 - 72983179 72983186 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr1 - 109484345 109484352 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr9 - 114601966 114601973 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr5 - 119726679 119726686 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr9 - 134895960 134895967 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr5 - 173579255 173579262 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chr1 - 224911384 224911391 4.67e-05 0.136 AAAGATAA
AAAGATAH DREME-5 chrUn_KI270467v1 - 2248 2255 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr20 + 10125126 10125133 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr6 - 13971449 13971456 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr20 - 18180527 18180534 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr19 + 36466254 36466261 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr1 - 43842293 43842300 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr14 - 61375407 61375414 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr1 - 61566370 61566377 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr1 + 61566472 61566479 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr14 - 65396011 65396018 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr11 - 68504523 68504530 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr18 - 72958389 72958396 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chrX - 78147297 78147304 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr17 - 80604383 80604390 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chrX + 81728818 81728825 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chrX - 84040765 84040772 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chrX - 87789029 87789036 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr14 + 90939481 90939488 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr10 + 99248103 99248110 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr1 - 120001199 120001206 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr7 + 128661659 128661666 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr5 + 130453045 130453052 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chrX + 137934445 137934452 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr6 - 145442275 145442282 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr5 - 154665071 154665078 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr1 - 175983516 175983523 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr5 + 179399620 179399627 7.22e-05 0.184 aaagatat
AAAGATAH DREME-5 chr3 + 187925015 187925022 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr1 - 222064560 222064567 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr1 - 228302215 228302222 7.22e-05 0.184 AAAGATAT
AAAGATAH DREME-5 chr5 + 4396023 4396030 9.35e-05 0.231 aaagatag
AAAGATAH DREME-5 chr6 + 22778632 22778639 9.35e-05 0.231 aaagatag
AAAGATAH DREME-5 chr5 + 113767102 113767109 9.35e-05 0.231 aaagatag
AAAGATAH DREME-5 chr6 + 152076486 152076493 9.35e-05 0.231 aaagatag
AAAGATAH DREME-5 chr17 - 67862899 67862906 9.35e-05 0.231 AAAGATAG
AAAGATAH DREME-5 chr1 - 101041489 101041496 9.35e-05 0.231 AAAGATAG
AAAGATAH DREME-5 chr12 - 111373414 111373421 9.35e-05 0.231 AAAGATAG
DEBUGGING INFORMATION

Command line: 

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_6 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif AAAGATAH /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings: 


  

    output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_6
    MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml
    sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
  
  

    background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background
    alphabet = DNA
    max stored scores = 100000
  
  

    allow clobber = true
    compute q-values = true
    parse genomic coord. = true
  

  

    text only = false
    scan both strands = true
    max strand = false
  

  

    threshold type = p-value
    output theshold = 0.0001
    pseudocount = 0.1
  

  

    alpha = 1
    verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.

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